Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0005572

Physical Location & Seq

Genomic Coordinates Forward (+)

78755999 .. 78761603

Gene Structure 5605 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG556900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGGAACTGTTATGGAATTAGAAGCTCCCAAACCCAAAATCGAAGACGACGACGACGTCTCCCCCGTCGAGCAAGTCCGTCTGACGGTGACCAACGACGACGACCCGACCCTCCCCGTCTGGACCTTCCGAATGTGGTTCCTAGGCCTCCTCTCCTGCGCCCTCCTCTCCTTTCTCAACCAGTTCTTCGCCTACAGAACCGAGCCACTCATCATCACCCAAATCACCGTACAAGTCGCTACGCTCCCCATAGGCCACTTCATGGCCAGAATCCTCCCCACCACCAAGTTCCGGATCCCCGGACTTGGCTCTGAGGTTTCCCTGAACCCCGGTCCCTTCAACATCAAAGAGCATGTGCTGATCACCATTTTCGCCAACGCCGGAAGTGCTTTCGGATCTGGCTCGGCTTACGCTGTGGGGATTGTCAACATCATCACGAAGTTTTATATGCGGAAGATCACTTTCCTCGCTAGCTGGCTGCTTATTATAACAACCCAGGTGTTGGGATATGGTTGGGCTGGACTCCTGAGAAAGTATGTTGTGGAGCCTGCTCAGATGTGGTGGCCGAACACACTCGTTCAGGTTTCACTTTTCCGGGCTTTGCATGAGAAAGAGGAGAAAGGTGACCAGCGCATTTCACGGGCAAAGTTCTTCCTAATTGCTCTAGTTTGCAGTTTTACATGGTATGCTTTCCCAGGGTATCTCTTCACCACCCTCACAAACATATCATGGGTATGTTGGATATTCTCCAAGTCGGTTACAGCCCAGCAGATTGGCTCAGGCATGAGAGGCCTTGGAGTTGGAGCCATTACGCTTGACTGGACTGCAGTGGCATCCTTCTTGTTCAGCCCCCTCATCTGCCCTTTCTTTGCCATTGCTAATGTTTTCGTCGGCTATGCATTGATAATCTACATTGTAATCCCTACAGCATACTGGGGATTGGACTTGTACGATGCACAGAAGTTTCCCATCTTTTCCTCACACTTGTTTACTGCAGCAGGTCAACGCTACGACATACCAGCTATTGTCAATGACAATTTTGAGTTAGATATAGCAAAGTATATGGAGCAGGGACGAATTCACTTAAGCACGTTTTTTGCTCTCACTTATGGCTTTGGTTTTGCCACAATCGCTTCCACCCTCACACATGTAGGGTTATTCTATGGAAGAGAGATCATGGATCGCTATCGTGCTTCTTACCAAGGAAAGGATGACATCCATACTAGATTGATGAGAAAATACAAGGACATACCTTCCTGGTGGTTTTACGTGTTGCTGGCCGTTACACTTGCAGTTTCCCTTGTACTTTGCATATTCTTGAATGATCAGGTTCAGATGCCATGGTGGGGACTTCTATTTGCTGGTGCCATAGCCTTTACATTCACCCTTCCTATCAGCATCATAACAGCAACAACAAACCAGACACCAGGACTAAACATAATAACAGAGTACATCATGGGAATCATATTACCAGGAAGACCAATAGCCAATGTATGCTTCAAAACTTACGGCTACATGAGCATGGCTCAAGCAGTCTCCTTCCTACAAGATTTCAAGCTTGGACATTACATGAAGATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATAGGAACAATTCTTGCGGGAACCACGAACCTTGTGGTAGCAGAGTGGTTGCTGCACTCGATCAAGAACATATGCGTGGATGATCCTCAATCGGATAGTCCTTGGACGTGCCCAGGTGACCGAGTCTTCTTTGATGCGTCTGTGATATGGGGTTTGGCAGGACCAAGACGTATATTTGGAAGCCTTGGAAACTATAGTGCCATGAACTGGTTCTTCCTCGGAGGTTTTATAGGACCAGTTATTGTTTGGCTACTACACAAGGCATTCCCAAAGCAAACTTGGATACGTCTCATAAATCTCCCAGTCCTTCTAGGAGCAACAGCTTATATGCCACCAGCTACAGCATTGAACTACAATTCCTGGATCGTAGTCGGAACCATCTTCAACTTTTTTGTCTTCCGTTACAGGAAGGAGTGGTGGCAGAGGTACAATTACGTTCTTTCAGCAGCATTAGATGCTGGGGTGGCTTTCATGGCAGTTTTAATTTACCTTTCAGTAGGGATTGAGAATACAAGTTTGACTTGGTGGGGAACAAACGGTGAACACTGTGACTTGGCAGTTTGTCCAACCGCCAAGGGCATAGAGGTCGACGGCTGTCCAGTGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0009628 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0080167 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

738

Amino Acids

83.03

Weight (kDa)

8.16

Isoelectric Point (pI)

29.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	40 - 701	4.9e-182	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64410
fragaria_vesca	FvH4_2g11230 FvH4_2g11230 FvH4_2g11230 FvH4_2g11230
malus_domestica	MD10G1056500.v1.1
prunus_persica	Prupe.8G074200_v2.0.a1 Prupe.8G074200_v2.0.a1 Prupe.8G074200_v2.0.a1 Prupe.8G074200_v2.0.a1 Prupe.8G074200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0161611 RchiOBHm_Chr2g0161681
rosa_laevigata	RLG00000021292
rosa_multiflora	Rmu_co8151922.1_g000001 Rmu_sc0008849.1_g000001 Rmu_ssc0000044.1_g000022
rosa_roxburghii	Rroxscaffold_2G00088690
rosa_rugosa	Rorug02G0491300
rosa_samantha	Rh2AG556900 Rh2AG557300 Rh2BG570400 Rh2BG570900 Rh2CG540900 Rh2DG579600 Rh2DG579800
rosa_wichuraiana	Rw2G046090 Rw2G046110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	488
AasI	GACNNNNNNGTC	1 cut(s)	56
AatII	GACGTC	1 cut(s)	60
Acc36I	ACCTGC	1 cut(s)	989
AccB1I	GGYRCC	1 cut(s)	1364
AccB7I	CCANNNNNTGG	3 cut(s)	262, 502, 1815
AccI	GTMKAC	1 cut(s)	2196
AccIII	TCCGGA	1 cut(s)	291
AciI	CCGC	3 cut(s)	451, 1625, 2178
AclWI	GGATC	7 cut(s)	289, 302, 403, 1188, 1570, 1685, 1979
AcoI	YGGCCR	3 cut(s)	264, 563, 1278
AcsI	RAATTY	1 cut(s)	1077
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	5 cut(s)	231, 950, 1305, 1451, 2036
AfiI	CCNNNNNNNGG	8 cut(s)	85, 262, 291, 305, 502, 1207, 1346, 1815
AflII	CTTAAG	1 cut(s)	1084
AflIII	ACRYGT	2 cut(s)	1147, 1269
AgsI	TTSAA	6 cut(s)	340, 1321, 1501, 1555, 1957, 1993
AjiI	CACGTC	1 cut(s)	1716
AjnI	CCWGG	7 cut(s)	495, 694, 1256, 1426, 1471, 1720, 1967
AjuI	GAANNNNNNNTTGG	2 cut(s)	1481, 1513
AloI	GAACNNNNNNTCC	2 cut(s)	1949, 1981
AluBI	AGCT	6 cut(s)	26, 474, 1022, 1558, 1931, 1946
AluI	AGCT	6 cut(s)	26, 474, 1022, 1558, 1931, 1946
Alw26I	GTCTC	3 cut(s)	64, 1540, 1901
AlwI	GGATC	7 cut(s)	289, 302, 403, 1188, 1570, 1685, 1979
Aor13HI	TCCGGA	1 cut(s)	291
AoxI	GGCC	6 cut(s)	145, 253, 264, 563, 790, 1278
ApeKI	GCWGC	4 cut(s)	478, 995, 1660, 2054
ApoI	RAATTY	1 cut(s)	1077
Asp700I	GAANNNNTTC	1 cut(s)	1817
AspA2I	CCTAGG	1 cut(s)	142
AspLEI	GCGC	2 cut(s)	161, 633
AspS9I	GGNCC	4 cut(s)	123, 332, 1769, 1841
AsuC2I	CCSGG	3 cut(s)	300, 330, 596
AsuHPI	GGTGA	9 cut(s)	100, 208, 217, 355, 635, 700, 1375, 1736, 2159
AsuNHI	GCTAGC	1 cut(s)	470
AvaII	GGWCC	4 cut(s)	123, 332, 1769, 1841
AvrII	CCTAGG	1 cut(s)	142
BaeGI	GKGCMC	1 cut(s)	1721
BalI	TGGCCA	1 cut(s)	266
BamHI	GGATCC	1 cut(s)	294
BanI	GGYRCC	1 cut(s)	1364
BbsI	GAAGAC	4 cut(s)	51, 1483, 1726, 1996
BbvI	GCAGC	4 cut(s)	465, 1007, 1647, 2066
BccI	CCATC	2 cut(s)	977, 1994
BceAI	ACGGC	3 cut(s)	1265, 1525, 2215
BcgI	CGANNNNNNTGC	2 cut(s)	2176, 2210
BciT130I	CCWGG	7 cut(s)	497, 696, 1258, 1428, 1473, 1722, 1969
BciVI	GTATCC	1 cut(s)	1884
BclI	TGATCA	2 cut(s)	360, 1324
BcnI	CCSGG	3 cut(s)	300, 330, 596
BcoDI	GTCTC	3 cut(s)	64, 1540, 1901
BfaI	CTAG	5 cut(s)	143, 471, 665, 1224, 1919
BfmI	CTRYAG	6 cut(s)	193, 825, 924, 993, 1801, 1947
BfrI	CTTAAG	1 cut(s)	1084
BfuAI	ACCTGC	1 cut(s)	989
BfuI	GTATCC	1 cut(s)	1884
BisI	GCNGC	4 cut(s)	479, 996, 1661, 2055
BlnI	CCTAGG	1 cut(s)	142
BlsI	GCNGC	4 cut(s)	480, 997, 1662, 2056
Bme18I	GGWCC	4 cut(s)	123, 332, 1769, 1841
BmgBI	CACGTC	1 cut(s)	1716
BmgT120I	GGNCC	4 cut(s)	123, 332, 1769, 1841
BmiI	GGNNCC	8 cut(s)	140, 296, 334, 546, 805, 1366, 1630, 1984
BmrI	ACTGGG	2 cut(s)	943, 1904
BmsI	GCATC	6 cut(s)	842, 943, 1326, 1407, 1732, 2053
BmtI	GCTAGC	1 cut(s)	474
BmuI	ACTGGG	2 cut(s)	943, 1904
BoxI	GACNNNNGTC	1 cut(s)	2202
BpiI	GAAGAC	4 cut(s)	51, 1483, 1726, 1996
BplI	GAGNNNNNCTC	2 cut(s)	1510, 1542
Bpu10I	CCTNAGC	1 cut(s)	778
BpuEI	CTTGAG	1 cut(s)	1512
BpuMI	CCSGG	3 cut(s)	300, 330, 596
BsaAI	YACGTR	1 cut(s)	1270
BsaBI	GATNNNNATC	1 cut(s)	1185
BsaHI	GRCGYC	1 cut(s)	57
BsaWI	WCCGGW	1 cut(s)	291
BsaXI	ACNNNNNCTCC	2 cut(s)	44, 74
Bsc4I	CCNNNNNNNGG	8 cut(s)	85, 262, 291, 305, 502, 1207, 1346, 1815
Bse1I	ACTGG	7 cut(s)	181, 824, 938, 1820, 1844, 1910, 2207
Bse3DI	GCAATG	1 cut(s)	873
Bse8I	GATNNNNATC	1 cut(s)	1185
BseAI	TCCGGA	1 cut(s)	291
BseBI	CCWGG	7 cut(s)	497, 696, 1258, 1428, 1473, 1722, 1969
BseGI	GGATG	4 cut(s)	833, 1215, 1216, 1693
BseJI	GATNNNNATC	1 cut(s)	1185
BseLI	CCNNNNNNNGG	8 cut(s)	85, 262, 291, 305, 502, 1207, 1346, 1815
BseMI	GCAATG	1 cut(s)	873
BseMII	CTCAG	4 cut(s)	303, 518, 566, 792
BseNI	ACTGG	7 cut(s)	181, 824, 938, 1820, 1844, 1910, 2207
BseRI	GAGGAG	3 cut(s)	140, 155, 629
BseSI	GKGCMC	1 cut(s)	1721
BseXI	GCAGC	4 cut(s)	465, 1007, 1647, 2066
BseYI	CCCAGC	2 cut(s)	765, 2066
BsgI	GTGCAG	1 cut(s)	1646
BshFI	GGCC	6 cut(s)	147, 255, 266, 565, 792, 1280
BshNI	GGYRCC	1 cut(s)	1364
BsiSI	CCGG	5 cut(s)	292, 300, 330, 381, 595
BslFI	GGGAC	3 cut(s)	318, 1086, 1362
BslI	CCNNNNNNNGG	8 cut(s)	85, 262, 291, 305, 502, 1207, 1346, 1815
BsmAI	GTCTC	3 cut(s)	64, 1540, 1901
BsmBI	CGTCTC	2 cut(s)	64, 1901
BsmFI	GGGAC	3 cut(s)	318, 1086, 1362
BsmI	GAATGC	1 cut(s)	1871
BsnI	GGCC	6 cut(s)	147, 255, 266, 565, 792, 1280
Bsp1286I	GDGCHC	1 cut(s)	1721
Bsp13I	TCCGGA	1 cut(s)	291
Bsp19I	CCATGG	1 cut(s)	1340
BspACI	CCGC	3 cut(s)	451, 1625, 2178
BspANI	GGCC	6 cut(s)	147, 255, 266, 565, 792, 1280
BspCNI	CTCAG	4 cut(s)	304, 519, 565, 791
BspEI	TCCGGA	1 cut(s)	291
BspLI	GGNNCC	8 cut(s)	140, 296, 334, 546, 805, 1366, 1630, 1984
BspMAI	CTGCAG	2 cut(s)	829, 997
BspMI	ACCTGC	1 cut(s)	989
BspOI	GCTAGC	1 cut(s)	474
BspPI	GGATC	7 cut(s)	289, 302, 403, 1188, 1570, 1685, 1979
BspT107I	GGYRCC	1 cut(s)	1364
BspTI	CTTAAG	1 cut(s)	1084
BsrDI	GCAATG	1 cut(s)	873
BsrI	ACTGG	7 cut(s)	181, 824, 938, 1820, 1844, 1910, 2207
BssNI	GRCGYC	1 cut(s)	57
BssT1I	CCWWGG	7 cut(s)	142, 793, 1201, 1340, 1709, 1792, 2181
Bst2UI	CCWGG	7 cut(s)	497, 696, 1258, 1428, 1473, 1722, 1969
Bst4CI	ACNGT	5 cut(s)	10, 88, 229, 2147, 2156
Bst6I	CTCTTC	2 cut(s)	710, 1162
BstACI	GRCGYC	1 cut(s)	57
BstAFI	CTTAAG	1 cut(s)	1084
BstAPI	GCANNNNNTGC	1 cut(s)	2063
BstBAI	YACGTR	1 cut(s)	1270
BstC8I	GCNNGC	4 cut(s)	472, 476, 549, 1278
BstDEI	CTNAG	5 cut(s)	312, 527, 552, 778, 1597
BstDSI	CCRYGG	1 cut(s)	1340
BstEII	GGTNACC	3 cut(s)	88, 623, 1724
BstF5I	GGATG	4 cut(s)	833, 1215, 1216, 1693
BstHHI	GCGC	2 cut(s)	161, 633
BstMAI	GTCTC	3 cut(s)	64, 1540, 1901
BstMWI	GCNNNNNNNGC	7 cut(s)	386, 789, 1130, 1518, 2063, 2072, 2081
BstNI	CCWGG	7 cut(s)	497, 696, 1258, 1428, 1473, 1722, 1969
BstNSI	RCATGY	2 cut(s)	356, 1151
BstPAI	GACNNNNGTC	1 cut(s)	2202
BstPI	GGTNACC	3 cut(s)	88, 623, 1724
BstSFI	CTRYAG	6 cut(s)	193, 825, 924, 993, 1801, 1947
BstSLI	GKGCMC	1 cut(s)	1721
BstV1I	GCAGC	4 cut(s)	465, 1007, 1647, 2066
BstV2I	GAAGAC	4 cut(s)	51, 1483, 1726, 1996
BstX2I	RGATCY	3 cut(s)	294, 395, 1575
BstXI	CCANNNNNNTGG	1 cut(s)	773
BstYI	RGATCY	3 cut(s)	294, 395, 1575
BsuI	GTATCC	1 cut(s)	1884
BsuRI	GGCC	6 cut(s)	147, 255, 266, 565, 792, 1280
BtgI	CCRYGG	1 cut(s)	1340
BtrI	CACGTC	1 cut(s)	1716
BtsCI	GGATG	4 cut(s)	833, 1215, 1216, 1693
BtsI	GCAGTG	1 cut(s)	834
BtsIMutI	CAGTG	3 cut(s)	834, 2152, 2214
BveI	ACCTGC	1 cut(s)	989
Cac8I	GCNNGC	4 cut(s)	472, 476, 549, 1278
CfoI	GCGC	2 cut(s)	161, 633
Cfr13I	GGNCC	4 cut(s)	123, 332, 1769, 1841
CseI	GACGC	1 cut(s)	1734
Csp6I	GTAC	5 cut(s)	230, 949, 1304, 1450, 2035
CspCI	CAANNNNNGTGG	2 cut(s)	1621, 1656
CviQI	GTAC	5 cut(s)	230, 949, 1304, 1450, 2035
DdeI	CTNAG	5 cut(s)	312, 527, 552, 778, 1597
DrdI	GACNNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	3 cut(s)	264, 563, 1278
Eam1104I	CTCTTC	2 cut(s)	710, 1162
EarI	CTCTTC	2 cut(s)	710, 1162
Eco130I	CCWWGG	7 cut(s)	142, 793, 1201, 1340, 1709, 1792, 2181
Eco147I	AGGCCT	2 cut(s)	147, 792
Eco47I	GGWCC	4 cut(s)	123, 332, 1769, 1841
Eco91I	GGTNACC	3 cut(s)	88, 623, 1724
EcoO65I	GGTNACC	3 cut(s)	88, 623, 1724
EcoRI	GAATTC	1 cut(s)	1077
EcoRII	CCWGG	7 cut(s)	495, 694, 1256, 1426, 1471, 1720, 1967
EcoT14I	CCWWGG	7 cut(s)	142, 793, 1201, 1340, 1709, 1792, 2181
EcoT22I	ATGCAT	1 cut(s)	901
ErhI	CCWWGG	7 cut(s)	142, 793, 1201, 1340, 1709, 1792, 2181
Esp3I	CGTCTC	2 cut(s)	64, 1901
FalI	AAGNNNNNCTT	2 cut(s)	2113, 2145
FaqI	GGGAC	3 cut(s)	318, 1086, 1362
FauI	CCCGC	1 cut(s)	1618
FauNDI	CATATG	1 cut(s)	1679
FbaI	TGATCA	2 cut(s)	360, 1324
FblI	GTMKAC	1 cut(s)	2196
Fnu4HI	GCNGC	4 cut(s)	479, 996, 1661, 2055
FokI	GGATG	4 cut(s)	820, 1202, 1223, 1700
Fsp4HI	GCNGC	4 cut(s)	479, 996, 1661, 2055
FspBI	CTAG	5 cut(s)	143, 471, 665, 1224, 1919
GlaI	GCGC	2 cut(s)	160, 632
GluI	GCNGC	4 cut(s)	479, 996, 1661, 2055
GsaI	CCCAGC	2 cut(s)	769, 2070
HaeIII	GGCC	6 cut(s)	147, 255, 266, 565, 792, 1280
HapII	CCGG	5 cut(s)	292, 300, 330, 381, 595
HgaI	GACGC	1 cut(s)	1734
HhaI	GCGC	2 cut(s)	161, 633
Hin1I	GRCGYC	1 cut(s)	57
Hin6I	GCGC	2 cut(s)	159, 631
HinP1I	GCGC	2 cut(s)	159, 631
HincII	GTYRAC	3 cut(s)	427, 1004, 2197
HindII	GTYRAC	3 cut(s)	427, 1004, 2197
HindIII	AAGCTT	1 cut(s)	1556
HinfI	GANTC	4 cut(s)	270, 522, 1461, 1731
HpaII	CCGG	5 cut(s)	292, 300, 330, 381, 595
HphI	GGTGA	9 cut(s)	100, 208, 217, 355, 635, 700, 1375, 1736, 2159
Hpy166II	GTNNAC	5 cut(s)	427, 990, 1004, 2150, 2197
Hpy188I	TCNGA	9 cut(s)	84, 131, 313, 395, 555, 1335, 1702, 1829, 1982
Hpy188III	TCNNGA	6 cut(s)	121, 292, 436, 526, 1318, 1672
Hpy8I	GTNNAC	5 cut(s)	427, 990, 1004, 2150, 2197
Hpy99I	CGWCG	8 cut(s)	53, 56, 59, 71, 101, 104, 893, 2201
HpyAV	CCTTC	8 cut(s)	136, 346, 847, 1263, 1397, 1549, 1925, 2011
HpyCH4III	ACNGT	5 cut(s)	10, 88, 229, 2147, 2156
HpyCH4IV	ACGT	7 cut(s)	57, 1091, 1269, 1715, 1777, 1894, 2043
HpyCH4V	TGCA	9 cut(s)	604, 672, 827, 899, 956, 995, 1292, 1311, 1663
HpyF10VI	GCNNNNNNNGC	7 cut(s)	386, 789, 1130, 1518, 2063, 2072, 2081
HpyF3I	CTNAG	5 cut(s)	312, 527, 552, 778, 1597
HpySE526I	ACGT	7 cut(s)	57, 1091, 1269, 1715, 1777, 1894, 2043
Hsp92I	GRCGYC	1 cut(s)	57
HspAI	GCGC	2 cut(s)	159, 631
Kpn2I	TCCGGA	1 cut(s)	291
Ksp22I	TGATCA	2 cut(s)	360, 1324
LmnI	GCTCC	6 cut(s)	31, 249, 544, 803, 1066, 1922
Lsp1109I	GCAGC	4 cut(s)	465, 1007, 1647, 2066
LweI	GCATC	6 cut(s)	842, 943, 1326, 1407, 1732, 2053
MaeI	CTAG	5 cut(s)	143, 471, 665, 1224, 1919
MaeII	ACGT	7 cut(s)	57, 1091, 1269, 1715, 1777, 1894, 2043
MaeIII	GTNAC	7 cut(s)	88, 623, 757, 1282, 1724, 2009, 2156
MflI	RGATCY	3 cut(s)	294, 395, 1575
MhlI	GDGCHC	1 cut(s)	1721
MlsI	TGGCCA	1 cut(s)	266
MluCI	AATT	8 cut(s)	17, 657, 1036, 1077, 1617, 1963, 2038, 2091
MluNI	TGGCCA	1 cut(s)	266
MlyI	GAGTC	2 cut(s)	516, 1740
MmeI	TCCRAC	4 cut(s)	719, 781, 1960, 2198
Mox20I	TGGCCA	1 cut(s)	266
Mph1103I	ATGCAT	1 cut(s)	901
MroI	TCCGGA	1 cut(s)	291
MroXI	GAANNNNTTC	1 cut(s)	1817
MscI	TGGCCA	1 cut(s)	266
MseI	TTAA	2 cut(s)	1085, 2090
MslI	CAYNNNNRTG	3 cut(s)	733, 1520, 1682
Msp20I	TGGCCA	1 cut(s)	266
MspCI	CTTAAG	1 cut(s)	1084
MspI	CCGG	5 cut(s)	292, 300, 330, 381, 595
Mva1269I	GAATGC	1 cut(s)	1871
MvaI	CCWGG	7 cut(s)	497, 696, 1258, 1428, 1473, 1722, 1969
MwoI	GCNNNNNNNGC	7 cut(s)	386, 789, 1130, 1518, 2063, 2072, 2081
NciI	CCSGG	3 cut(s)	300, 330, 596
NcoI	CCATGG	1 cut(s)	1340
NdeI	CATATG	1 cut(s)	1679
NheI	GCTAGC	1 cut(s)	470
NlaIV	GGNNCC	8 cut(s)	140, 296, 334, 546, 805, 1366, 1630, 1984
NmeAIII	GCCGAG	1 cut(s)	383
NmuCI	GTSAC	4 cut(s)	88, 623, 1724, 2156
NsiI	ATGCAT	1 cut(s)	901
NspI	RCATGY	2 cut(s)	356, 1151
PasI	CCCWGGG	1 cut(s)	695
PceI	AGGCCT	2 cut(s)	147, 792
PciI	ACATGT	1 cut(s)	1147
PcsI	WCGNNNNNNNCGW	3 cut(s)	48, 54, 63
PctI	GAATGC	1 cut(s)	1871
PdmI	GAANNNNTTC	1 cut(s)	1817
PfeI	GAWTC	2 cut(s)	270, 1461
PflFI	GACNNNGTC	2 cut(s)	56, 1730
PflMI	CCANNNNNTGG	3 cut(s)	262, 502, 1815
PfoI	TCCNGGA	1 cut(s)	1967
PkrI	GCNGC	4 cut(s)	480, 997, 1662, 2056
PleI	GAGTC	2 cut(s)	516, 1739
PpsI	GAGTC	2 cut(s)	516, 1739
Ppu21I	YACGTR	1 cut(s)	1270
PscI	ACATGT	1 cut(s)	1147
PshAI	GACNNNNGTC	1 cut(s)	2202
PsiI	TTATAA	1 cut(s)	488
Psp6I	CCWGG	7 cut(s)	495, 694, 1256, 1426, 1471, 1720, 1967
PspEI	GGTNACC	3 cut(s)	88, 623, 1724
PspFI	CCCAGC	2 cut(s)	765, 2066
PspGI	CCWGG	7 cut(s)	495, 694, 1256, 1426, 1471, 1720, 1967
PspN4I	GGNNCC	8 cut(s)	140, 296, 334, 546, 805, 1366, 1630, 1984
PspPI	GGNCC	4 cut(s)	123, 332, 1769, 1841
PstI	CTGCAG	2 cut(s)	829, 997
PsuI	RGATCY	3 cut(s)	294, 395, 1575
PsyI	GACNNNGTC	2 cut(s)	56, 1730
RsaI	GTAC	5 cut(s)	231, 950, 1305, 1451, 2036
RsaNI	GTAC	5 cut(s)	230, 949, 1304, 1450, 2035
RseI	CAYNNNNRTG	3 cut(s)	733, 1520, 1682
SalI	GTCGAC	1 cut(s)	2195
SaqAI	TTAA	2 cut(s)	1085, 2090
SatI	GCNGC	4 cut(s)	479, 996, 1661, 2055
Sau96I	GGNCC	4 cut(s)	123, 332, 1769, 1841
SchI	GAGTC	2 cut(s)	516, 1740
SduI	GDGCHC	1 cut(s)	1721
SfaNI	GCATC	6 cut(s)	842, 943, 1326, 1407, 1732, 2053
SfcI	CTRYAG	6 cut(s)	193, 825, 924, 993, 1801, 1947
SinI	GGWCC	4 cut(s)	123, 332, 1769, 1841
SmiMI	CAYNNNNRTG	3 cut(s)	733, 1520, 1682
SmlI	CTYRAG	2 cut(s)	1084, 1527
SmoI	CTYRAG	2 cut(s)	1084, 1527
Sse9I	AATT	8 cut(s)	17, 657, 1036, 1077, 1617, 1963, 2038, 2091
SseBI	AGGCCT	2 cut(s)	147, 792
SsiI	CCGC	3 cut(s)	451, 1625, 2178
SspMI	CTAG	5 cut(s)	143, 471, 665, 1224, 1919
StuI	AGGCCT	2 cut(s)	147, 792
StyI	CCWWGG	7 cut(s)	142, 793, 1201, 1340, 1709, 1792, 2181
TaaI	ACNGT	5 cut(s)	10, 88, 229, 2147, 2156
TaiI	ACGT	7 cut(s)	60, 1094, 1272, 1718, 1780, 1897, 2046
TaqI	TCGA	4 cut(s)	42, 69, 1667, 2196
TaqII	GACCGA	1 cut(s)	1743
TasI	AATT	8 cut(s)	17, 657, 1036, 1077, 1617, 1963, 2038, 2091
TatI	WGTACW	2 cut(s)	1303, 1449
TfiI	GAWTC	2 cut(s)	270, 1461
Tru1I	TTAA	2 cut(s)	1085, 2090
Tru9I	TTAA	2 cut(s)	1085, 2090
TscAI	CASTG	3 cut(s)	834, 2159, 2214
TseFI	GTSAC	4 cut(s)	88, 623, 1724, 2156
TseI	GCWGC	4 cut(s)	478, 995, 1660, 2054
Tsp45I	GTSAC	4 cut(s)	88, 623, 1724, 2156
TspDTI	ATGAA	5 cut(s)	250, 1586, 1597, 1826, 2068
TspGWI	ACGGA	2 cut(s)	68, 1997
TspRI	CASTG	3 cut(s)	834, 2159, 2214
Tth111I	GACNNNGTC	2 cut(s)	56, 1730
Van91I	CCANNNNNTGG	3 cut(s)	262, 502, 1815
Vha464I	CTTAAG	1 cut(s)	1084
VpaK11BI	GGWCC	4 cut(s)	123, 332, 1769, 1841
XapI	RAATTY	1 cut(s)	1077
XceI	RCATGY	2 cut(s)	356, 1151
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1639, 1851, 1884
XmaJI	CCTAGG	1 cut(s)	142
XmiI	GTMKAC	1 cut(s)	2196
XmnI	GAANNNNTTC	1 cut(s)	1817
XspI	CTAG	5 cut(s)	143, 471, 665, 1224, 1919
ZraI	GACGTC	1 cut(s)	58
Zsp2I	ATGCAT	1 cut(s)	901

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.