Rh2AG624600
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
84798128 .. 84800286
2159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG624600.1

Sequence Viewer

Length: 1917 bp
ATGAACAGAATTTCAGTCTGCGTAATCTTCCTTTCATTGTTTCTCTTCCTCCACAGCACTAGTTCTAAAGTGGATGATGAGACCAGGGATTCACTACTCTCCTTCCTTGATGAACTTTCAAACGGTGCTACTCAACCTGGCTTCACTTTGGGTTGGACCACCTTGTCTGATCCCTGTGAGAAACAATGGGGAGGTATAACATGTGATTCCCAAAAAACTTCTGTCACAGGACTCTTTCTAAACAAACAAACCCTCATTGGAACCCTTCACGTTGCTACCCTTTGCAATGTGAAATCTGTTGCTGCCTCTCTCACCAGTCTTGACCTTAATGACAACAGCATTGGGGGAGAAATTTCAGCTGATATTCAGAACTGTCAGCAGCTCACTAGATTGAATGTAAGCGGAAACCGGCTTTCAGGAAACCTTCCTGATTCACTTGCCATGTTAAGCAACCTGAGAAGGCTTGACATTTCCTACAATGACTTCTCTGGCAAGTTACCTGAGTTGTCTTTGATTTCAGGCCTTACAGATTTCCTTGCTCAAGATAACCAGCTTACTGGGGAGATACCAAAATTCAACTTCTCTCATTTTGACACCTTCAATGTCTCCAACAATAACTTTCATGGTCCAATCCAGAATGCGAATGGCAATGTCTCTGCAAGCAGCTTCCTTGGTAATCCTGGATTATGTGGATATCCACTGCCAAACAACTGTTCAACAACTTCTTCTTCTTCTACAGCAACAGCGGGTGACAACTCACACTCAAGGGGGACCTCCTCAAACAAAATTCTCATCTACTCGGGGTATGGTATTTTGGCCTTGATTTGTCTAGTGTTACTCATTTCCAGGATATGTAGCAAAAGAAAAAAGAAAAATGATAAGATGGCTGTTGATGCACCTGAAAAGAACAAGGTAGCATCAGTTGATGAAAGCATGGACAGCAAATATAGTGCTTCATCGACTGACTTCAAAGGCGGTTTCAGCAAATCACAATGTTCGGTAACTTTCTCAGCCGAGAGCAATGCTAATATGACCTCCTCCTCACTTGTTGTCCTTTCCAGCCCTGTGGTCAATGGATTGAACTTTGAGGAGTTGCTCAAAGCTCCTGCTGAGATGCTTGGAAGAGGCAAGCATGGTAGCGTGTACAAGGTCATCATTGATTATGGGGCGACCCTTGTTGTCAAAAGGATTAAAGATTGGACGATTTCGACTAATGATTTCAAGCTGAGGATGCAGAGGTTAGACCAAGCCAAGCACCCTAATGTATTGTCTGCTCTTGCCTTCTACTCCTCCAGACAAGAAAAGCTTCTGGTCTATGAATATCAGTACAATGGAAGCCTTTTCAGGCTCATACACGGAAACCAAGGGGGCAAAGCCTTTGGCTGGACTAGCAGACTTTCTTGTGCAGCAACCATTGCCGACACATTAGCTTTTATGCATGAGGATCTTCACAAAGATGGGATTGTTCATGGCAACTTAAAATCTTCGAACATTTTGTTGAACAAGAACATGGAGCCTTGCATAAGCGAGTATGGTCTTATGAAGATCAACGATCATGATAATATATTGCCGGGGAAGGTGTCTGCTGCCAGTAGTGCTTCTACCACATTTAAAGCAGACATTTATGGGTTTGGTGTGATTCTTCTTGAGCTACTTACAGGCAAACTTGTACAGCACAACGGAGTTGACTTGACCTCTTGGGTTCACTCAGTGGTTCGAGAGGAATGGACTGCAGAAGTGTTTGACAAGTCCTTATATTCGGAAGGTGCAAGCGAGGAGAGGATGGTGAACTTGCTCCAAGTGGCTATAAAGTGTGTCAACCGTTCTCCAGAGGCTAGACCGAGCATGAAACAAGTTGCTACCATGATCAATACCATAAGAGAGGATGAAGACAAATCCACATTCTTTGATGTATGA

Protein Analysis

638

Amino Acids

69.6

Weight (kDa)

6.41

Isoelectric Point (pI)

27.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 103 - 162 3.5e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 371 - 621 5.9e-23 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 371 - 620 3.1e-22 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014780)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 163
AciI CCGC 3 cut(s) 402, 746, 975
AclWI GGATC 2 cut(s) 164, 1452
AcsI RAATTY 4 cut(s) 9, 351, 572, 786
AdeI CACNNNGTG 1 cut(s) 1711
AfaI GTAC 3 cut(s) 1145, 1328, 1671
AfiI CCNNNNNNNGG 1 cut(s) 1383
AflIII ACRYGT 1 cut(s) 200
AgsI TTSAA 9 cut(s) 120, 394, 577, 601, 717, 970, 1081, 1222, 1501
AhlI ACTAGT 1 cut(s) 59
AjnI CCWGG 4 cut(s) 83, 136, 679, 845
AjuI GAANNNNNNNTTGG 2 cut(s) 697, 729
AluBI AGCT 9 cut(s) 359, 382, 553, 666, 1103, 1225, 1306, 1430, 1651
AluI AGCT 9 cut(s) 359, 382, 553, 666, 1103, 1225, 1306, 1430, 1651
Alw26I GTCTC 3 cut(s) 74, 610, 658
AlwI GGATC 2 cut(s) 164, 1452
Ama87I CYCGRG 1 cut(s) 799
AoxI GGCC 2 cut(s) 520, 816
ApeKI GCWGC 5 cut(s) 302, 379, 663, 1406, 1586
ApoI RAATTY 4 cut(s) 9, 351, 572, 786
Asp700I GAANNNNTTC 1 cut(s) 1305
AspS9I GGNCC 3 cut(s) 156, 626, 771
AsuC2I CCSGG 1 cut(s) 1572
AsuHPI GGTGA 3 cut(s) 304, 761, 1798
AsuII TTCGAA 1 cut(s) 1487
AvaI CYCGRG 1 cut(s) 799
AvaII GGWCC 3 cut(s) 156, 626, 771
BbsI GAAGAC 1 cut(s) 1896
BbvCI CCTCAGC 1 cut(s) 1226
BbvI GCAGC 5 cut(s) 289, 391, 675, 1418, 1573
BccI CCATC 3 cut(s) 877, 1451, 1777
BcgI CGANNNNNNTGC 2 cut(s) 1004, 1038
BciT130I CCWGG 4 cut(s) 85, 138, 681, 847
BclI TGATCA 1 cut(s) 1866
BcnI CCSGG 1 cut(s) 1572
BcoDI GTCTC 3 cut(s) 74, 610, 658
BcuI ACTAGT 1 cut(s) 59
BfaI CTAG 5 cut(s) 60, 387, 830, 1389, 1836
BfmI CTRYAG 2 cut(s) 735, 1731
BisI GCNGC 5 cut(s) 303, 380, 664, 1407, 1587
BlsI GCNGC 5 cut(s) 304, 381, 665, 1408, 1588
Bme1390I CCNGG 5 cut(s) 85, 138, 681, 847, 1572
Bme18I GGWCC 3 cut(s) 156, 626, 771
BmeT110I CYCGRG 1 cut(s) 799
BmgT120I GGNCC 3 cut(s) 156, 626, 771
BmiI GGNNCC 3 cut(s) 262, 772, 1515
BmrFI CCNGG 5 cut(s) 85, 138, 681, 847, 1572
BmrI ACTGGG 1 cut(s) 567
BmsI GCATC 4 cut(s) 883, 926, 1104, 1221
BmuI ACTGGG 1 cut(s) 567
BpiI GAAGAC 1 cut(s) 1896
BpmI CTGGAG 2 cut(s) 1276, 1812
Bpu10I CCTNAGC 1 cut(s) 1226
Bpu14I TTCGAA 1 cut(s) 1487
BpuEI CTTGAG 3 cut(s) 525, 748, 1667
BpuMI CCSGG 1 cut(s) 1572
BsaI GGTCTC 1 cut(s) 74
BsaJI CCNNGG 4 cut(s) 84, 670, 1363, 1571
Bsc4I CCNNNNNNNGG 1 cut(s) 1383
Bse118I RCCGGY 1 cut(s) 408
Bse1I ACTGG 3 cut(s) 315, 562, 1590
Bse3DI GCAATG 4 cut(s) 292, 655, 1027, 1413
BseBI CCWGG 4 cut(s) 85, 138, 681, 847
BseDI CCNNGG 4 cut(s) 84, 670, 1363, 1571
BseGI GGATG 4 cut(s) 79, 1236, 1788, 1891
BseLI CCNNNNNNNGG 1 cut(s) 1383
BseMI GCAATG 4 cut(s) 292, 655, 1027, 1413
BseMII CTCAG 6 cut(s) 446, 492, 1023, 1101, 1217, 1722
BseNI ACTGG 3 cut(s) 315, 562, 1590
BseRI GAGGAG 6 cut(s) 766, 1027, 1030, 1103, 1279, 1790
BseXI GCAGC 5 cut(s) 289, 391, 675, 1418, 1573
BsgI GTGCAG 1 cut(s) 1425
BshFI GGCC 2 cut(s) 522, 818
BsiHKCI CYCGRG 1 cut(s) 799
BsiSI CCGG 2 cut(s) 409, 1571
BslFI GGGAC 1 cut(s) 784
BslI CCNNNNNNNGG 1 cut(s) 1383
BsmAI GTCTC 3 cut(s) 74, 610, 658
BsmFI GGGAC 1 cut(s) 784
BsmI GAATGC 1 cut(s) 643
BsnI GGCC 2 cut(s) 522, 818
Bso31I GGTCTC 1 cut(s) 74
BsoBI CYCGRG 1 cut(s) 799
Bsp119I TTCGAA 1 cut(s) 1487
Bsp1407I TGTACA 2 cut(s) 1143, 1669
Bsp143I GATC 5 cut(s) 169, 1444, 1545, 1552, 1866
BspACI CCGC 3 cut(s) 402, 746, 975
BspANI GGCC 2 cut(s) 522, 818
BspCNI CTCAG 6 cut(s) 447, 493, 1022, 1102, 1218, 1721
BspHI TCATGA 1 cut(s) 1555
BspLI GGNNCC 3 cut(s) 262, 772, 1515
BspMAI CTGCAG 1 cut(s) 1735
BspPI GGATC 2 cut(s) 164, 1452
BspT104I TTCGAA 1 cut(s) 1487
BspTNI GGTCTC 1 cut(s) 74
BsrDI GCAATG 4 cut(s) 292, 655, 1027, 1413
BsrFI RCCGGY 1 cut(s) 408
BsrGI TGTACA 2 cut(s) 1143, 1669
BsrI ACTGG 3 cut(s) 315, 562, 1590
BssAI RCCGGY 1 cut(s) 408
BssECI CCNNGG 4 cut(s) 84, 670, 1363, 1571
BssMI GATC 5 cut(s) 169, 1444, 1545, 1552, 1866
BssT1I CCWWGG 2 cut(s) 670, 1363
Bst2UI CCWGG 4 cut(s) 85, 138, 681, 847
Bst4CI ACNGT 4 cut(s) 125, 374, 713, 1823
Bst6I CTCTTC 2 cut(s) 50, 1117
BstAPI GCANNNNNTGC 1 cut(s) 1415
BstAUI TGTACA 2 cut(s) 1143, 1669
BstBI TTCGAA 1 cut(s) 1487
BstC8I GCNNGC 3 cut(s) 661, 1130, 1771
BstDEI CTNAG 6 cut(s) 455, 501, 1009, 1110, 1226, 1708
BstF5I GGATG 4 cut(s) 79, 1236, 1788, 1891
BstKTI GATC 5 cut(s) 172, 1447, 1548, 1555, 1869
BstMAI GTCTC 3 cut(s) 74, 610, 658
BstMBI GATC 5 cut(s) 169, 1444, 1545, 1552, 1866
BstMWI GCNNNNNNNGC 7 cut(s) 893, 939, 981, 1231, 1389, 1415, 1595
BstNI CCWGG 4 cut(s) 85, 138, 681, 847
BstNSI RCATGY 1 cut(s) 204
BstSCI CCNGG 5 cut(s) 83, 136, 679, 845, 1570
BstSFI CTRYAG 2 cut(s) 735, 1731
BstV1I GCAGC 5 cut(s) 289, 391, 675, 1418, 1573
BstV2I GAAGAC 1 cut(s) 1896
BstX2I RGATCY 1 cut(s) 1444
BstXI CCANNNNNNTGG 2 cut(s) 557, 1066
BstYI RGATCY 1 cut(s) 1444
BsuRI GGCC 2 cut(s) 522, 818
BtsCI GGATG 4 cut(s) 79, 1236, 1788, 1891
BtsI GCAGTG 1 cut(s) 698
BtsIMutI CAGTG 2 cut(s) 698, 1716
Cac8I GCNNGC 3 cut(s) 661, 1130, 1771
CciI TCATGA 1 cut(s) 1555
Cfr10I RCCGGY 1 cut(s) 408
Cfr13I GGNCC 3 cut(s) 156, 626, 771
Csp6I GTAC 3 cut(s) 1144, 1327, 1670
CspCI CAANNNNNGTGG 1 cut(s) 1888
CviQI GTAC 3 cut(s) 1144, 1327, 1670
DdeI CTNAG 6 cut(s) 455, 501, 1009, 1110, 1226, 1708
DpnI GATC 5 cut(s) 171, 1446, 1547, 1554, 1868
DpnII GATC 5 cut(s) 169, 1444, 1545, 1552, 1866
DraI TTTAAA 1 cut(s) 1612
DraIII CACNNNGTG 1 cut(s) 1711
DrdI GACNNNNNNGTC 1 cut(s) 163
DseDI GACNNNNNNGTC 1 cut(s) 163
Eam1104I CTCTTC 2 cut(s) 50, 1117
EarI CTCTTC 2 cut(s) 50, 1117
Eco130I CCWWGG 2 cut(s) 670, 1363
Eco147I AGGCCT 1 cut(s) 522
Eco31I GGTCTC 1 cut(s) 74
Eco32I GATATC 1 cut(s) 695
Eco47I GGWCC 3 cut(s) 156, 626, 771
Eco88I CYCGRG 1 cut(s) 799
EcoO109I RGGNCCY 1 cut(s) 771
EcoRII CCWGG 4 cut(s) 83, 136, 679, 845
EcoRV GATATC 1 cut(s) 695
EcoT14I CCWWGG 2 cut(s) 670, 1363
EcoT22I ATGCAT 1 cut(s) 1440
ErhI CCWWGG 2 cut(s) 670, 1363
FalI AAGNNNNNCTT 2 cut(s) 1290, 1322
FaqI GGGAC 1 cut(s) 784
FauI CCCGC 1 cut(s) 739
FbaI TGATCA 1 cut(s) 1866
Fnu4HI GCNGC 5 cut(s) 303, 380, 664, 1407, 1587
FokI GGATG 4 cut(s) 86, 1243, 1795, 1898
Fsp4HI GCNGC 5 cut(s) 303, 380, 664, 1407, 1587
FspBI CTAG 5 cut(s) 60, 387, 830, 1389, 1836
GluI GCNGC 5 cut(s) 303, 380, 664, 1407, 1587
GsuI CTGGAG 2 cut(s) 1276, 1812
HaeIII GGCC 2 cut(s) 522, 818
HapII CCGG 2 cut(s) 409, 1571
HincII GTYRAC 2 cut(s) 1687, 1819
HindII GTYRAC 2 cut(s) 1687, 1819
HindIII AAGCTT 1 cut(s) 1304
HinfI GANTC 5 cut(s) 89, 206, 231, 431, 1639
HpaII CCGG 2 cut(s) 409, 1571
HphI GGTGA 3 cut(s) 304, 761, 1798
Hpy166II GTNNAC 5 cut(s) 1144, 1687, 1705, 1789, 1819
Hpy188I TCNGA 3 cut(s) 169, 369, 1762
Hpy8I GTNNAC 5 cut(s) 1144, 1687, 1705, 1789, 1819
HpyAV CCTTC 8 cut(s) 112, 275, 434, 453, 607, 1291, 1570, 1757
HpyCH4III ACNGT 4 cut(s) 125, 374, 713, 1823
HpyCH4IV ACGT 1 cut(s) 270
HpyCH4V TGCA 9 cut(s) 285, 659, 896, 1234, 1406, 1438, 1521, 1733, 1769
HpyF10VI GCNNNNNNNGC 7 cut(s) 893, 939, 981, 1231, 1389, 1415, 1595
HpyF3I CTNAG 6 cut(s) 455, 501, 1009, 1110, 1226, 1708
HpySE526I ACGT 1 cut(s) 270
Ksp22I TGATCA 1 cut(s) 1866
Kzo9I GATC 5 cut(s) 169, 1444, 1545, 1552, 1866
LmnI GCTCC 3 cut(s) 1108, 1513, 1800
Lsp1109I GCAGC 5 cut(s) 289, 391, 675, 1418, 1573
LweI GCATC 4 cut(s) 883, 926, 1104, 1221
MaeI CTAG 5 cut(s) 60, 387, 830, 1389, 1836
MaeII ACGT 1 cut(s) 270
MaeIII GTNAC 5 cut(s) 223, 495, 749, 834, 1000
MalI GATC 5 cut(s) 171, 1446, 1547, 1554, 1868
MboI GATC 5 cut(s) 169, 1444, 1545, 1552, 1866
MflI RGATCY 1 cut(s) 1444
MluCI AATT 4 cut(s) 9, 351, 572, 786
MlyI GAGTC 1 cut(s) 225
MmeI TCCRAC 2 cut(s) 134, 633
Mph1103I ATGCAT 1 cut(s) 1440
MroXI GAANNNNTTC 1 cut(s) 1305
MseI TTAA 5 cut(s) 327, 446, 1191, 1478, 1611
MslI CAYNNNNRTG 2 cut(s) 1260, 1455
MspA1I CMGCKG 2 cut(s) 359, 746
MspI CCGG 2 cut(s) 409, 1571
MspR9I CCNGG 5 cut(s) 85, 138, 681, 847, 1572
Mva1269I GAATGC 1 cut(s) 643
MvaI CCWGG 4 cut(s) 85, 138, 681, 847
MwoI GCNNNNNNNGC 7 cut(s) 893, 939, 981, 1231, 1389, 1415, 1595
NciI CCSGG 1 cut(s) 1572
NdeII GATC 5 cut(s) 169, 1444, 1545, 1552, 1866
NlaIV GGNNCC 3 cut(s) 262, 772, 1515
NmeAIII GCCGAG 1 cut(s) 1039
NmuCI GTSAC 2 cut(s) 223, 749
NsiI ATGCAT 1 cut(s) 1440
NspI RCATGY 1 cut(s) 204
NspV TTCGAA 1 cut(s) 1487
PagI TCATGA 1 cut(s) 1555
PceI AGGCCT 1 cut(s) 522
PciI ACATGT 1 cut(s) 200
PctI GAATGC 1 cut(s) 643
PdmI GAANNNNTTC 1 cut(s) 1305
PfeI GAWTC 4 cut(s) 89, 206, 431, 1639
PfoI TCCNGGA 2 cut(s) 679, 845
PkrI GCNGC 5 cut(s) 304, 381, 665, 1408, 1588
PleI GAGTC 1 cut(s) 225
PpsI GAGTC 1 cut(s) 225
PpuMI RGGWCCY 1 cut(s) 771
PscI ACATGT 1 cut(s) 200
Psp5II RGGWCCY 1 cut(s) 771
Psp6I CCWGG 4 cut(s) 83, 136, 679, 845
PspGI CCWGG 4 cut(s) 83, 136, 679, 845
PspN4I GGNNCC 3 cut(s) 262, 772, 1515
PspPI GGNCC 3 cut(s) 156, 626, 771
PspPPI RGGWCCY 1 cut(s) 771
PstI CTGCAG 1 cut(s) 1735
PsuI RGATCY 1 cut(s) 1444
PvuII CAGCTG 1 cut(s) 359
RsaI GTAC 3 cut(s) 1145, 1328, 1671
RsaNI GTAC 3 cut(s) 1144, 1327, 1670
RseI CAYNNNNRTG 2 cut(s) 1260, 1455
SaqAI TTAA 5 cut(s) 327, 446, 1191, 1478, 1611
SatI GCNGC 5 cut(s) 303, 380, 664, 1407, 1587
Sau3AI GATC 5 cut(s) 169, 1444, 1545, 1552, 1866
Sau96I GGNCC 3 cut(s) 156, 626, 771
SchI GAGTC 1 cut(s) 225
ScrFI CCNGG 5 cut(s) 85, 138, 681, 847, 1572
SfaNI GCATC 4 cut(s) 883, 926, 1104, 1221
SfcI CTRYAG 2 cut(s) 735, 1731
SfuI TTCGAA 1 cut(s) 1487
SinI GGWCC 3 cut(s) 156, 626, 771
SmiMI CAYNNNNRTG 2 cut(s) 1260, 1455
SmlI CTYRAG 3 cut(s) 540, 763, 1646
SmoI CTYRAG 3 cut(s) 540, 763, 1646
SpeI ACTAGT 1 cut(s) 59
Sse9I AATT 4 cut(s) 9, 351, 572, 786
SseBI AGGCCT 1 cut(s) 522
SsiI CCGC 3 cut(s) 402, 746, 975
SspMI CTAG 5 cut(s) 60, 387, 830, 1389, 1836
StuI AGGCCT 1 cut(s) 522
StyD4I CCNGG 5 cut(s) 83, 136, 679, 845, 1570
StyI CCWWGG 2 cut(s) 670, 1363
TaaI ACNGT 4 cut(s) 125, 374, 713, 1823
TaiI ACGT 1 cut(s) 273
TaqI TCGA 4 cut(s) 959, 1208, 1487, 1717
TaqII GACCGA 1 cut(s) 1855
TasI AATT 4 cut(s) 9, 351, 572, 786
TatI WGTACW 3 cut(s) 1143, 1326, 1669
TfiI GAWTC 4 cut(s) 89, 206, 431, 1639
Tru1I TTAA 5 cut(s) 327, 446, 1191, 1478, 1611
Tru9I TTAA 5 cut(s) 327, 446, 1191, 1478, 1611
TscAI CASTG 2 cut(s) 705, 1716
TseFI GTSAC 2 cut(s) 223, 749
TseI GCWGC 5 cut(s) 302, 379, 663, 1406, 1586
Tsp45I GTSAC 2 cut(s) 223, 749
TspGWI ACGGA 2 cut(s) 1371, 1695
TspRI CASTG 2 cut(s) 705, 1716
VpaK11BI GGWCC 3 cut(s) 156, 626, 771
XapI RAATTY 4 cut(s) 9, 351, 572, 786
XceI RCATGY 1 cut(s) 204
XcmI CCANNNNNNNNNTGG 1 cut(s) 641
XmnI GAANNNNTTC 1 cut(s) 1305
XspI CTAG 5 cut(s) 60, 387, 830, 1389, 1836
Zsp2I ATGCAT 1 cut(s) 1440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.