Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000534

Physical Location & Seq

Genomic Coordinates Forward (+)

67893029 .. 67899740

Gene Structure 6712 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0551800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGATTGGAACAAGCGGAATGTTCTCAGCCAACGGCCTACTGTGCAGTTTAAAAGAAAAGGGAGCGGCAACAAGAAAGGAAACTGGAATAATTCAAACCGCGAACAGTCTTCAGGAAATTCTCAGTCCCTCGATACTGTGTATCGTATACTTTGCCCCTCTAAAAAAATTGGTGGTGTAATCGGAAAAGGTGGTGGCATAATCAAATCCCTGAGAGAAGAGACCCGGTCCAAGATTACAGTTGCTGATTCTGTTCGGGGCTCAGATGAGAGAGTAATTATTATCTTTAGTTCCCCAATCAAAATTTCAAGGAAACAAAATAGTGATGAAGATTCAAAGGAGCCCTTGGAGCCACACTGTGCTGCCCAAGATGCACTTTTGAAAGTTCATGACAGGATCGTAGAGGAAGATCTTTATAATGGAGTTACATTTGACGATGATAATGAGAATATTGTTGTCACAAGACTTCTAGTTCCAAACAACTTGGTAGGATGTCTTCTAGGAAAGCGTGGGGATGTTATTCAAAGATTGCGAAGTGAGACACGTGCAAACATTCGGGTTCTTCCTGCAGATCAGCTTCCTACTTGTGCTATGGATACTGATGAATTGGTGCAGATATCTGGAAAACCGGACGTGGCAAAAAGAGCACTTTATGAAGTGTCTACTCTATTGCATCAGAATCCACGTAAGGATAAACCTCCTTTGGGATCAGCTATACCTTTTGGGGGTCAGGGGTTTAATCTTCCAGGAGCCCCAAATATGCTGCCACCTGGCAATCCAATGTGGCCTAATAGGGAACCTTCCCACAGTATGCCACCAATGCCATGGATAGGAGAATATGGAAATCATTCCTCTGGATATGCTCGAGGAGGTTTTAATGGTGATCCTGTGGGGCATGGGGTTGAAGCTTCAGCTGAGTTTTATATAAAGATTTTGTGTTCAGCTGGGAAAATTGGTGGGGTTATTGGCAAGGGGGGTTTTAATGTGAAACAGTTACAAGAGGAAACAGGAGCCAATATTCATGTTCAGGATGCATCAACAGACTCAGAAGAACGTGTGATTCGTGTCTCTGCTTTCGAGGCTTTGCGGAATCCAAGGTCGCAAACAATTGAGGCAATTCTTCAGCTTCAAAACAAAGCAAGTGAATTATCTGATAAAGGTACGATCACGACTAGGCTTCTTGTTCCATCGAGTAAAGTTGGCTGCATCCTTGGACAAGGAGGACAAGTTATTAATGAGATGAGGAGGAGAACCCAGGCAGATATTCGTGTGTACTCGAAAGACGATAGGCCTAAGTGTGCAGCTGAAGATGAAGAACTTGTGCAGATATCTGGGAACTTTGTTGTTGCTAAAGATGCTTTGGCTGAGATTACATCAAGACTGAGAATAAGAACTCTGCGTGATACAAATTCTGGAGAAGAACATGCTCCTATTGGCCCTGCGCACAGATTTGGTCCTCCTGGCAGCTTGCCTGTTAGAGGAATGCCACCACCACCTAGTGCAATTAGAGCTGGCAGCTCTGGTCGATATGATCCTCTAAAGGTTGGTAGACATGAATACGAACCAGAGAGATATCCAGTTCTGCCGGCTGCTTCTGGCTATGAAAGAGTCAACAGTGCTTTGGATAGTAGGATTCCAAATAATGCAGTGGATTCTTTTACTGGAATAGGGGGGAGCAACATTTCCCATATTGGAGAGATTTCAGGACCAAGAGTGAAATTCCAAGACTCCCAAAGTAGTCGCCCTGAACGTGTTGCTGAGATCCGTGGTCCTGATCAGTTGAATGCAGCACAGAATATCCTTCAGGCCCTCATGGCTTCTATTGGTCAAAATGCAAGTGCTCAGCCAAGTTCCTACCACAACGCAAATACTCGGCAAGGCTCCTACCACAACATCTCTGATCACCGAAGCCCGTATCATATCAATGCTCCAAGAAGCCCACACCGAATGAATGCTCCACAAAGTCCGTATCGAGTAAATGCGCAGCAAAGTCCATACCAAATCAAGGCTCAGCAAAGCCCATACCAAACCAATACTCATCAAAGCCCCTACCATATCAATGCTCATCAAGGCCCATACCAAATCAATGCTCAGCAAAGCTCTTATCAGTTGAGTGCTCCGCAAGGATCAAACCCCAACATCAATGCTCCACAAGGTGCATACCGTAACCTTAACTCACAGCAAGCTACGTACCATAACCTTAACTCACAGCAAGGTGCATATCATAACCTTAACTCACAGCAAGGTGCCTACCAGTACCGACCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

755

Amino Acids

82.7

Weight (kDa)

9.24

Isoelectric Point (pI)

58.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	48 - 102	3e-11	KH domain
KH_1	PF00013	154 - 220	1.3e-13	KH domain
KH_1	PF00013	309 - 358	3.2e-11	KH domain
KH_1	PF00013	390 - 458	2.3e-13	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000534)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g50400 FvH4_6g50410 FvH4_6g50410 FvH4_6g50410 FvH4_6g50410 FvH4_6g50420 FvH4_6g50420 FvH4_6g50420 FvH4_6g50420 FvH4_6g50420 FvH4_6g50420 FvH4_6g50420 FvH4_6g50420 FvH4_6g50420 FvH4_6g50420 FvH4_6g50420
malus_domestica	MD09G1036400.v1.1 MD09G1036600.v1.1 MD17G1038100.v1.1 MD17G1038200.v1.1
prunus_persica	Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G280900_v2.0.a1 Prupe.3G281000_v2.0.a1 Prupe.3G281000_v2.0.a1 Prupe.3G281000_v2.0.a1 Prupe.3G281000_v2.0.a1
pyrus_communis	pycom111g02920 pycom111g02930 pycom111g02940 pycom111g02950 pycom16g07600 pycom17g03430 pycom17g03440
rosa_chinensis	RchiOBHm_Chr2g0170801 RchiOBHm_Chr2g0170811 RchiOBHm_Chr2g0170821 RchiOBHm_Chr2g0170831 RchiOBHm_Chr2g0170841
rosa_laevigata	RLG00000021981 RLG00000021983 RLG00000021984 RLG00000021985
rosa_multiflora	Rmu_co8418849.1_g000001 Rmu_co8437261.1_g000001 Rmu_sc0008393.1_g000003
rosa_roxburghii	Rroxscaffold_1G00030380 Rroxscaffold_2G00081040 Rroxscaffold_2G00081050 Rroxscaffold_2G00081060
rosa_rugosa	Rorug02G0551300 Rorug02G0551400 Rorug02G0551700 Rorug02G0551800
rosa_samantha	Rh2AG624300 Rh2BG634700 Rh2BG634800 Rh2BG634900 Rh2BG635000 Rh2CG603500 Rh2CG603600 Rh2CG603700 Rh2CG603800
rosa_wichuraiana	Rw0G017070 Rw2G051700 Rw2G051710 Rw2G051720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	417
Acc16I	TGCGCA	2 cut(s)	1443, 1983
AccB1I	GGYRCC	1 cut(s)	2246
AccBSI	CCGCTC	1 cut(s)	66
AccI	GTMKAC	3 cut(s)	148, 662, 1549
AccII	CGCG	1 cut(s)	102
AciI	CCGC	5 cut(s)	16, 66, 100, 1087, 2120
AclWI	GGATC	6 cut(s)	404, 715, 878, 1526, 1756, 2134
AcsI	RAATTY	4 cut(s)	118, 303, 1408, 1718
AcuI	CTGAAG	5 cut(s)	96, 894, 1106, 1326, 1787
AcvI	CACGTG	1 cut(s)	545
AdeI	CACNNNGTG	3 cut(s)	359, 1499, 2156
AfaI	GTAC	4 cut(s)	1162, 1274, 2192, 2258
AfiI	CCNNNNNNNGG	5 cut(s)	704, 725, 830, 1478, 2005
AflIII	ACRYGT	3 cut(s)	542, 1054, 1750
AgsI	TTSAA	8 cut(s)	96, 309, 336, 382, 524, 905, 1130, 1783
AjiI	CACGTC	1 cut(s)	634
AjnI	CCWGG	4 cut(s)	745, 769, 1254, 1459
AjuI	GAANNNNNNNTTGG	2 cut(s)	289, 321
Alw21I	GWGCWC	3 cut(s)	649, 1843, 2119
Alw26I	GTCTC	3 cut(s)	215, 533, 1072
AlwI	GGATC	6 cut(s)	404, 715, 878, 1526, 1756, 2134
AlwNI	CAGNNNCTG	1 cut(s)	245
Ama87I	CYCGRG	1 cut(s)	864
AoxI	GGCC	6 cut(s)	35, 785, 1289, 1435, 1806, 2071
ApeKI	GCWGC	9 cut(s)	362, 763, 1203, 1301, 1464, 1515, 1589, 1787, 1984
ApoI	RAATTY	4 cut(s)	118, 303, 1408, 1718
AseI	ATTAAT	1 cut(s)	1233
Asp700I	GAANNNNTTC	1 cut(s)	847
AspLEI	GCGC	2 cut(s)	1444, 1984
AspS9I	GGNCC	7 cut(s)	228, 1436, 1454, 1706, 1769, 1807, 2072
AsuC2I	CCSGG	1 cut(s)	226
AsuHPI	GGTGA	2 cut(s)	893, 1895
AvaI	CYCGRG	1 cut(s)	864
AvaII	GGWCC	4 cut(s)	228, 1454, 1706, 1769
BanI	GGYRCC	1 cut(s)	2246
BanII	GRGCYC	3 cut(s)	263, 345, 754
BarI	GAAGNNNNNNTAC	2 cut(s)	480, 512
BbrPI	CACGTG	1 cut(s)	545
BbsI	GAAGAC	2 cut(s)	102, 488
Bbv12I	GWGCWC	3 cut(s)	649, 1843, 2119
BbvI	GCAGC	9 cut(s)	349, 750, 1190, 1313, 1476, 1527, 1576, 1799, 1996
BccI	CCATC	1 cut(s)	1195
BceAI	ACGGC	1 cut(s)	50
BciT130I	CCWGG	4 cut(s)	747, 771, 1256, 1461
BciVI	GTATCC	1 cut(s)	589
BclI	TGATCA	2 cut(s)	1774, 1900
BcnI	CCSGG	1 cut(s)	226
BcoDI	GTCTC	3 cut(s)	215, 533, 1072
BfaI	CTAG	4 cut(s)	470, 500, 1173, 1497
BfmI	CTRYAG	1 cut(s)	567
BfuI	GTATCC	1 cut(s)	589
BglI	GCCNNNNNGGC	1 cut(s)	1814
BglII	AGATCT	1 cut(s)	409
BlpI	GCTNAGC	3 cut(s)	1842, 2010, 2091
Bme1390I	CCNGG	5 cut(s)	226, 747, 771, 1256, 1461
Bme18I	GGWCC	4 cut(s)	228, 1454, 1706, 1769
BmeT110I	CYCGRG	1 cut(s)	864
BmgBI	CACGTC	1 cut(s)	634
BmgT120I	GGNCC	7 cut(s)	228, 1436, 1454, 1706, 1769, 1807, 2072
BmiI	GGNNCC	7 cut(s)	342, 351, 751, 798, 1012, 1882, 2248
BmrFI	CCNGG	5 cut(s)	226, 747, 771, 1256, 1461
BmsI	GCATC	6 cut(s)	361, 682, 1021, 1043, 1215, 1345
BpiI	GAAGAC	2 cut(s)	102, 488
BpmI	CTGGAG	1 cut(s)	1434
Bpu1102I	GCTNAGC	3 cut(s)	1842, 2010, 2091
BpuMI	CCSGG	1 cut(s)	226
BsaAI	YACGTR	3 cut(s)	545, 686, 2190
BsaI	GGTCTC	1 cut(s)	215
BsaJI	CCNNGG	6 cut(s)	345, 824, 1094, 1210, 1254, 1765
BsaWI	WCCGGW	1 cut(s)	628
BsaXI	ACNNNNNCTCC	2 cut(s)	1212, 1242
Bsc4I	CCNNNNNNNGG	5 cut(s)	704, 725, 830, 1478, 2005
Bse118I	RCCGGY	1 cut(s)	1585
Bse1I	ACTGG	4 cut(s)	89, 1577, 1666, 2254
BseBI	CCWGG	4 cut(s)	747, 771, 1256, 1461
BseDI	CCNNGG	6 cut(s)	345, 824, 1094, 1210, 1254, 1765
BseGI	GGATG	4 cut(s)	497, 520, 1036, 1206
BseLI	CCNNNNNNNGG	5 cut(s)	704, 725, 830, 1478, 2005
BseNI	ACTGG	4 cut(s)	89, 1577, 1666, 2254
BseRI	GAGGAG	3 cut(s)	882, 1258, 1261
BseXI	GCAGC	9 cut(s)	349, 750, 1190, 1313, 1476, 1527, 1576, 1799, 1996
BseYI	CCCAGC	1 cut(s)	944
BsgI	GTGCAG	4 cut(s)	65, 632, 1320, 1343
Bsh1236I	CGCG	1 cut(s)	102
BshFI	GGCC	6 cut(s)	37, 787, 1291, 1437, 1808, 2073
BshNI	GGYRCC	1 cut(s)	2246
BsiHKAI	GWGCWC	3 cut(s)	649, 1843, 2119
BsiHKCI	CYCGRG	1 cut(s)	864
BsiSI	CCGG	3 cut(s)	226, 629, 1586
BslFI	GGGAC	1 cut(s)	112
BslI	CCNNNNNNNGG	5 cut(s)	704, 725, 830, 1478, 2005
BsmAI	GTCTC	3 cut(s)	215, 533, 1072
BsmFI	GGGAC	1 cut(s)	112
BsmI	GAATGC	3 cut(s)	1488, 1789, 1957
BsnI	GGCC	6 cut(s)	37, 787, 1291, 1437, 1808, 2073
Bso31I	GGTCTC	1 cut(s)	215
BsoBI	CYCGRG	1 cut(s)	864
Bsp1286I	GDGCHC	6 cut(s)	263, 345, 649, 754, 1843, 2119
Bsp1720I	GCTNAGC	3 cut(s)	1842, 2010, 2091
Bsp19I	CCATGG	1 cut(s)	824
BspACI	CCGC	5 cut(s)	16, 66, 100, 1087, 2120
BspANI	GGCC	6 cut(s)	37, 787, 1291, 1437, 1808, 2073
BspFNI	CGCG	1 cut(s)	102
BspHI	TCATGA	1 cut(s)	388
BspLI	GGNNCC	7 cut(s)	342, 351, 751, 798, 1012, 1882, 2248
BspMAI	CTGCAG	1 cut(s)	571
BspPI	GGATC	6 cut(s)	404, 715, 878, 1526, 1756, 2134
BspT107I	GGYRCC	1 cut(s)	2246
BspTNI	GGTCTC	1 cut(s)	215
BsrBI	CCGCTC	1 cut(s)	66
BsrFI	RCCGGY	1 cut(s)	1585
BsrI	ACTGG	4 cut(s)	89, 1577, 1666, 2254
BssAI	RCCGGY	1 cut(s)	1585
BssECI	CCNNGG	6 cut(s)	345, 824, 1094, 1210, 1254, 1765
BssNAI	GTATAC	1 cut(s)	149
BssT1I	CCWWGG	4 cut(s)	345, 824, 1094, 1210
Bst1107I	GTATAC	1 cut(s)	149
Bst2UI	CCWGG	4 cut(s)	747, 771, 1256, 1461
Bst4CI	ACNGT	9 cut(s)	43, 108, 139, 241, 359, 809, 993, 1616, 2165
Bst6I	CTCTTC	1 cut(s)	213
BstBAI	YACGTR	3 cut(s)	545, 686, 2190
BstC8I	GCNNGC	4 cut(s)	1469, 1513, 1587, 2184
BstDSI	CCRYGG	2 cut(s)	824, 1765
BstENI	CCTNNNNNAGG	1 cut(s)	1476
BstF5I	GGATG	4 cut(s)	497, 520, 1036, 1206
BstFNI	CGCG	1 cut(s)	102
BstHHI	GCGC	2 cut(s)	1444, 1984
BstMAI	GTCTC	3 cut(s)	215, 533, 1072
BstMWI	GCNNNNNNNGC	9 cut(s)	43, 349, 371, 644, 820, 1079, 1355, 1508, 1814
BstNI	CCWGG	4 cut(s)	747, 771, 1256, 1461
BstNSI	RCATGY	1 cut(s)	1427
BstSCI	CCNGG	5 cut(s)	224, 745, 769, 1254, 1459
BstSFI	CTRYAG	1 cut(s)	567
BstSNI	TACGTA	1 cut(s)	2190
BstUI	CGCG	1 cut(s)	102
BstV1I	GCAGC	9 cut(s)	349, 750, 1190, 1313, 1476, 1527, 1576, 1799, 1996
BstV2I	GAAGAC	2 cut(s)	102, 488
BstX2I	RGATCY	2 cut(s)	409, 1761
BstXI	CCANNNNNNTGG	1 cut(s)	825
BstYI	RGATCY	2 cut(s)	409, 1761
BstZ17I	GTATAC	1 cut(s)	149
BsuI	GTATCC	1 cut(s)	589
BsuRI	GGCC	6 cut(s)	37, 787, 1291, 1437, 1808, 2073
BtgI	CCRYGG	2 cut(s)	824, 1765
BtrI	CACGTC	1 cut(s)	634
BtsCI	GGATG	4 cut(s)	497, 520, 1036, 1206
BtsI	GCAGTG	1 cut(s)	1653
BtsIMutI	CAGTG	3 cut(s)	355, 1621, 1653
Cac8I	GCNNGC	4 cut(s)	1469, 1513, 1587, 2184
CaiI	CAGNNNCTG	1 cut(s)	245
CciI	TCATGA	1 cut(s)	388
CfoI	GCGC	2 cut(s)	1444, 1984
Cfr10I	RCCGGY	1 cut(s)	1585
Cfr13I	GGNCC	7 cut(s)	228, 1436, 1454, 1706, 1769, 1807, 2072
Csp6I	GTAC	4 cut(s)	1161, 1273, 2191, 2257
CviAII	CATG	7 cut(s)	389, 825, 896, 1022, 1424, 1553, 1813
CviQI	GTAC	4 cut(s)	1161, 1273, 2191, 2257
DraI	TTTAAA	1 cut(s)	52
DraIII	CACNNNGTG	3 cut(s)	359, 1499, 2156
Eam1104I	CTCTTC	1 cut(s)	213
EarI	CTCTTC	1 cut(s)	213
Eco105I	TACGTA	1 cut(s)	2190
Eco130I	CCWWGG	4 cut(s)	345, 824, 1094, 1210
Eco147I	AGGCCT	1 cut(s)	1291
Eco24I	GRGCYC	3 cut(s)	263, 345, 754
Eco31I	GGTCTC	1 cut(s)	215
Eco32I	GATATC	3 cut(s)	618, 1329, 1574
Eco47I	GGWCC	4 cut(s)	228, 1454, 1706, 1769
Eco57I	CTGAAG	5 cut(s)	96, 894, 1106, 1326, 1787
Eco72I	CACGTG	1 cut(s)	545
Eco88I	CYCGRG	1 cut(s)	864
EcoNI	CCTNNNNNAGG	1 cut(s)	1476
EcoO109I	RGGNCCY	1 cut(s)	1807
EcoRII	CCWGG	4 cut(s)	745, 769, 1254, 1459
EcoRV	GATATC	3 cut(s)	618, 1329, 1574
EcoT14I	CCWWGG	4 cut(s)	345, 824, 1094, 1210
EcoT22I	ATGCAT	1 cut(s)	1036
EcoT38I	GRGCYC	3 cut(s)	263, 345, 754
ErhI	CCWWGG	4 cut(s)	345, 824, 1094, 1210
FaeI	CATG	7 cut(s)	392, 828, 899, 1025, 1427, 1556, 1816
FalI	AAGNNNNNCTT	4 cut(s)	329, 361, 360, 392
FaqI	GGGAC	1 cut(s)	112
FatI	CATG	7 cut(s)	388, 824, 895, 1021, 1423, 1552, 1812
FbaI	TGATCA	2 cut(s)	1774, 1900
FblI	GTMKAC	3 cut(s)	148, 662, 1549
FokI	GGATG	4 cut(s)	504, 527, 1043, 1193
FriOI	GRGCYC	3 cut(s)	263, 345, 754
FspBI	CTAG	4 cut(s)	470, 500, 1173, 1497
FspI	TGCGCA	2 cut(s)	1443, 1983
GlaI	GCGC	2 cut(s)	1443, 1983
GsaI	CCCAGC	1 cut(s)	948
GsuI	CTGGAG	1 cut(s)	1434
HaeIII	GGCC	6 cut(s)	37, 787, 1291, 1437, 1808, 2073
HapII	CCGG	3 cut(s)	226, 629, 1586
HhaI	GCGC	2 cut(s)	1444, 1984
Hin1II	CATG	7 cut(s)	392, 828, 899, 1025, 1427, 1556, 1816
Hin6I	GCGC	2 cut(s)	1442, 1982
HinP1I	GCGC	2 cut(s)	1442, 1982
HincII	GTYRAC	1 cut(s)	1612
HindII	GTYRAC	1 cut(s)	1612
HindIII	AAGCTT	1 cut(s)	906
HpaII	CCGG	3 cut(s)	226, 629, 1586
HphI	GGTGA	2 cut(s)	893, 1895
Hpy166II	GTNNAC	5 cut(s)	149, 663, 1273, 1550, 1612
Hpy188I	TCNGA	6 cut(s)	185, 265, 678, 1048, 1153, 1900
Hpy8I	GTNNAC	5 cut(s)	149, 663, 1273, 1550, 1612
HpyAV	CCTTC	2 cut(s)	810, 1811
HpyCH4III	ACNGT	9 cut(s)	43, 108, 139, 241, 359, 809, 993, 1616, 2165
HpyCH4IV	ACGT	6 cut(s)	544, 633, 685, 1054, 1750, 2189
HpyF10VI	GCNNNNNNNGC	9 cut(s)	43, 349, 371, 644, 820, 1079, 1355, 1508, 1814
HpySE526I	ACGT	6 cut(s)	544, 633, 685, 1054, 1750, 2189
Hsp92II	CATG	7 cut(s)	392, 828, 899, 1025, 1427, 1556, 1816
HspAI	GCGC	2 cut(s)	1442, 1982
KroI	GCCGGC	1 cut(s)	1585
KroNI	GCCGGC	1 cut(s)	1587
Ksp22I	TGATCA	2 cut(s)	1774, 1900
Lsp1109I	GCAGC	9 cut(s)	349, 750, 1190, 1313, 1476, 1527, 1576, 1799, 1996
LweI	GCATC	6 cut(s)	361, 682, 1021, 1043, 1215, 1345
MaeI	CTAG	4 cut(s)	470, 500, 1173, 1497
MaeII	ACGT	6 cut(s)	544, 633, 685, 1054, 1750, 2189
MaeIII	GTNAC	4 cut(s)	424, 457, 993, 2165
MbiI	CCGCTC	1 cut(s)	66
MfeI	CAATTG	1 cut(s)	1107
MflI	RGATCY	2 cut(s)	409, 1761
MhlI	GDGCHC	6 cut(s)	263, 345, 649, 754, 1843, 2119
MlyI	GAGTC	3 cut(s)	1037, 1617, 1721
Mph1103I	ATGCAT	1 cut(s)	1036
MroNI	GCCGGC	1 cut(s)	1585
MroXI	GAANNNNTTC	1 cut(s)	847
MseI	TTAA	8 cut(s)	51, 738, 876, 981, 1233, 2172, 2202, 2232
MslI	CAYNNNNRTG	2 cut(s)	1923, 2058
MspA1I	CMGCKG	3 cut(s)	914, 944, 1304
MspI	CCGG	3 cut(s)	226, 629, 1586
MspR9I	CCNGG	5 cut(s)	226, 747, 771, 1256, 1461
MunI	CAATTG	1 cut(s)	1107
Mva1269I	GAATGC	3 cut(s)	1488, 1789, 1957
MvaI	CCWGG	4 cut(s)	747, 771, 1256, 1461
MvnI	CGCG	1 cut(s)	102
MwoI	GCNNNNNNNGC	9 cut(s)	43, 349, 371, 644, 820, 1079, 1355, 1508, 1814
NaeI	GCCGGC	1 cut(s)	1587
NciI	CCSGG	1 cut(s)	226
NcoI	CCATGG	1 cut(s)	824
NgoMIV	GCCGGC	1 cut(s)	1585
NlaIII	CATG	7 cut(s)	392, 828, 899, 1025, 1427, 1556, 1816
NlaIV	GGNNCC	7 cut(s)	342, 351, 751, 798, 1012, 1882, 2248
NmeAIII	GCCGAG	1 cut(s)	1852
NmuCI	GTSAC	1 cut(s)	457
NsbI	TGCGCA	2 cut(s)	1443, 1983
NsiI	ATGCAT	1 cut(s)	1036
NspI	RCATGY	1 cut(s)	1427
PaeR7I	CTCGAG	1 cut(s)	864
PagI	TCATGA	1 cut(s)	388
PceI	AGGCCT	1 cut(s)	1291
PcsI	WCGNNNNNNNCGW	2 cut(s)	1060, 1747
PctI	GAATGC	3 cut(s)	1488, 1789, 1957
PdiI	GCCGGC	1 cut(s)	1587
PdmI	GAANNNNTTC	1 cut(s)	847
PfeI	GAWTC	7 cut(s)	248, 332, 679, 1060, 1090, 1633, 1652
PflFI	GACNNNGTC	1 cut(s)	226
PfoI	TCCNGGA	1 cut(s)	745
PleI	GAGTC	3 cut(s)	1037, 1616, 1721
PmaCI	CACGTG	1 cut(s)	545
PmlI	CACGTG	1 cut(s)	545
PpsI	GAGTC	3 cut(s)	1037, 1616, 1721
Ppu21I	YACGTR	3 cut(s)	545, 686, 2190
PshBI	ATTAAT	1 cut(s)	1233
PsiI	TTATAA	1 cut(s)	417
Psp6I	CCWGG	4 cut(s)	745, 769, 1254, 1459
PspCI	CACGTG	1 cut(s)	545
PspFI	CCCAGC	1 cut(s)	944
PspGI	CCWGG	4 cut(s)	745, 769, 1254, 1459
PspN4I	GGNNCC	7 cut(s)	342, 351, 751, 798, 1012, 1882, 2248
PspPI	GGNCC	7 cut(s)	228, 1436, 1454, 1706, 1769, 1807, 2072
PspXI	VCTCGAGB	1 cut(s)	864
PstI	CTGCAG	1 cut(s)	571
PstNI	CAGNNNCTG	1 cut(s)	245
PsuI	RGATCY	2 cut(s)	409, 1761
PsyI	GACNNNGTC	1 cut(s)	226
PvuII	CAGCTG	3 cut(s)	914, 944, 1304
RsaI	GTAC	4 cut(s)	1162, 1274, 2192, 2258
RsaNI	GTAC	4 cut(s)	1161, 1273, 2191, 2257
RseI	CAYNNNNRTG	2 cut(s)	1923, 2058
SaqAI	TTAA	8 cut(s)	51, 738, 876, 981, 1233, 2172, 2202, 2232
Sau96I	GGNCC	7 cut(s)	228, 1436, 1454, 1706, 1769, 1807, 2072
SchI	GAGTC	3 cut(s)	1037, 1617, 1721
ScrFI	CCNGG	5 cut(s)	226, 747, 771, 1256, 1461
SduI	GDGCHC	6 cut(s)	263, 345, 649, 754, 1843, 2119
SfaNI	GCATC	6 cut(s)	361, 682, 1021, 1043, 1215, 1345
SfcI	CTRYAG	1 cut(s)	567
Sfr274I	CTCGAG	1 cut(s)	864
SinI	GGWCC	4 cut(s)	228, 1454, 1706, 1769
SlaI	CTCGAG	1 cut(s)	864
SmiMI	CAYNNNNRTG	2 cut(s)	1923, 2058
SmlI	CTYRAG	1 cut(s)	864
SmoI	CTYRAG	1 cut(s)	864
SnaBI	TACGTA	1 cut(s)	2190
SseBI	AGGCCT	1 cut(s)	1291
SsiI	CCGC	5 cut(s)	16, 66, 100, 1087, 2120
SspI	AATATT	2 cut(s)	451, 1018
SspMI	CTAG	4 cut(s)	470, 500, 1173, 1497
StuI	AGGCCT	1 cut(s)	1291
StyD4I	CCNGG	5 cut(s)	224, 745, 769, 1254, 1459
StyI	CCWWGG	4 cut(s)	345, 824, 1094, 1210
TaaI	ACNGT	9 cut(s)	43, 108, 139, 241, 359, 809, 993, 1616, 2165
TaiI	ACGT	6 cut(s)	547, 636, 688, 1057, 1753, 2192
TaqI	TCGA	7 cut(s)	132, 865, 1077, 1190, 1277, 1525, 1972
TatI	WGTACW	1 cut(s)	1272
TauI	GCSGC	1 cut(s)	69
TfiI	GAWTC	7 cut(s)	248, 332, 679, 1060, 1090, 1633, 1652
Tru1I	TTAA	8 cut(s)	51, 738, 876, 981, 1233, 2172, 2202, 2232
Tru9I	TTAA	8 cut(s)	51, 738, 876, 981, 1233, 2172, 2202, 2232
TscAI	CASTG	3 cut(s)	362, 1621, 1653
TseFI	GTSAC	1 cut(s)	457
TseI	GCWGC	9 cut(s)	362, 763, 1203, 1301, 1464, 1515, 1589, 1787, 1984
Tsp45I	GTSAC	1 cut(s)	457
TspDTI	ATGAA	9 cut(s)	342, 377, 618, 669, 1010, 1326, 1569, 1617, 1964
TspGWI	ACGGA	2 cut(s)	1754, 1956
TspRI	CASTG	3 cut(s)	362, 1621, 1653
Tth111I	GACNNNGTC	1 cut(s)	226
VpaK11BI	GGWCC	4 cut(s)	228, 1454, 1706, 1769
VspI	ATTAAT	1 cut(s)	1233
XagI	CCTNNNNNAGG	1 cut(s)	1476
XapI	RAATTY	4 cut(s)	118, 303, 1408, 1718
XceI	RCATGY	1 cut(s)	1427
XcmI	CCANNNNNNNNNTGG	1 cut(s)	822
XhoI	CTCGAG	1 cut(s)	864
XmiI	GTMKAC	3 cut(s)	148, 662, 1549
XmnI	GAANNNNTTC	1 cut(s)	847
XspI	CTAG	4 cut(s)	470, 500, 1173, 1497
Zsp2I	ATGCAT	1 cut(s)	1036

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.