high mobility group
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0100971 |
| rosa_laevigata | RLG00000017032 |
| rosa_multiflora | Rmu_co8514483.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00141690 |
| rosa_rugosa | Rorug02G0094500 |
| rosa_samantha | Rh2AG141800 Rh2BG147000 Rh2CG148300 Rh2DG147500 |
| rosa_wichuraiana | Rw2G011130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 181, 368, 434 |
| AclWI | GGATC | 1 cut(s) | 412 |
| AcuI | CTGAAG | 1 cut(s) | 390 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 230 |
| AgsI | TTSAA | 2 cut(s) | 193, 303 |
| Alw21I | GWGCWC | 1 cut(s) | 452 |
| Alw26I | GTCTC | 1 cut(s) | 14 |
| AlwI | GGATC | 1 cut(s) | 412 |
| AspS9I | GGNCC | 1 cut(s) | 221 |
| AsuHPI | GGTGA | 2 cut(s) | 257, 400 |
| AvaII | GGWCC | 1 cut(s) | 221 |
| BanII | GRGCYC | 1 cut(s) | 452 |
| Bbv12I | GWGCWC | 1 cut(s) | 452 |
| BcoDI | GTCTC | 1 cut(s) | 14 |
| Bme18I | GGWCC | 1 cut(s) | 221 |
| BmgT120I | GGNCC | 1 cut(s) | 221 |
| BmiI | GGNNCC | 2 cut(s) | 61, 154 |
| BmsI | GCATC | 3 cut(s) | 115, 121, 199 |
| BpmI | CTGGAG | 2 cut(s) | 171, 218 |
| BsaI | GGTCTC | 1 cut(s) | 14 |
| BsaJI | CCNNGG | 1 cut(s) | 63 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 230 |
| Bse1I | ACTGG | 1 cut(s) | 201 |
| BseDI | CCNNGG | 1 cut(s) | 63 |
| BseGI | GGATG | 1 cut(s) | 130 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 230 |
| BseMII | CTCAG | 1 cut(s) | 39 |
| BseNI | ACTGG | 1 cut(s) | 201 |
| BseRI | GAGGAG | 1 cut(s) | 188 |
| BseYI | CCCAGC | 1 cut(s) | 55 |
| BsiHKAI | GWGCWC | 1 cut(s) | 452 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 230 |
| BsmAI | GTCTC | 1 cut(s) | 14 |
| Bso31I | GGTCTC | 1 cut(s) | 14 |
| Bsp1286I | GDGCHC | 1 cut(s) | 452 |
| Bsp143I | GATC | 1 cut(s) | 417 |
| BspACI | CCGC | 3 cut(s) | 181, 368, 434 |
| BspCNI | CTCAG | 1 cut(s) | 40 |
| BspLI | GGNNCC | 2 cut(s) | 61, 154 |
| BspPI | GGATC | 1 cut(s) | 412 |
| BspTNI | GGTCTC | 1 cut(s) | 14 |
| BsrI | ACTGG | 1 cut(s) | 201 |
| BssECI | CCNNGG | 1 cut(s) | 63 |
| BssMI | GATC | 1 cut(s) | 417 |
| BssT1I | CCWWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 3 cut(s) | 25, 229, 264 |
| BstC8I | GCNNGC | 2 cut(s) | 31, 448 |
| BstDEI | CTNAG | 2 cut(s) | 48, 453 |
| BstF5I | GGATG | 1 cut(s) | 130 |
| BstKTI | GATC | 1 cut(s) | 420 |
| BstMAI | GTCTC | 1 cut(s) | 14 |
| BstMBI | GATC | 1 cut(s) | 417 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 26 |
| BstX2I | RGATCY | 1 cut(s) | 417 |
| BstYI | RGATCY | 1 cut(s) | 417 |
| BtsCI | GGATG | 1 cut(s) | 130 |
| BtsI | GCAGTG | 1 cut(s) | 370 |
| BtsIMutI | CAGTG | 3 cut(s) | 260, 370, 390 |
| Cac8I | GCNNGC | 2 cut(s) | 31, 448 |
| Cfr13I | GGNCC | 1 cut(s) | 221 |
| CseI | GACGC | 1 cut(s) | 131 |
| CviAII | CATG | 2 cut(s) | 169, 422 |
| DdeI | CTNAG | 2 cut(s) | 48, 453 |
| DpnI | GATC | 1 cut(s) | 419 |
| DpnII | GATC | 1 cut(s) | 417 |
| Ecl136II | GAGCTC | 1 cut(s) | 450 |
| Eco130I | CCWWGG | 1 cut(s) | 63 |
| Eco24I | GRGCYC | 1 cut(s) | 452 |
| Eco31I | GGTCTC | 1 cut(s) | 14 |
| Eco47I | GGWCC | 1 cut(s) | 221 |
| Eco53kI | GAGCTC | 1 cut(s) | 450 |
| Eco57I | CTGAAG | 1 cut(s) | 390 |
| EcoICRI | GAGCTC | 1 cut(s) | 450 |
| EcoT14I | CCWWGG | 1 cut(s) | 63 |
| EcoT38I | GRGCYC | 1 cut(s) | 452 |
| ErhI | CCWWGG | 1 cut(s) | 63 |
| FaeI | CATG | 2 cut(s) | 172, 425 |
| FaiI | YATR | 6 cut(s) | 170, 288, 321, 332, 342, 423 |
| FatI | CATG | 2 cut(s) | 168, 421 |
| FauI | CCCGC | 1 cut(s) | 427 |
| FokI | GGATG | 1 cut(s) | 137 |
| FriOI | GRGCYC | 1 cut(s) | 452 |
| GsaI | CCCAGC | 1 cut(s) | 59 |
| GsuI | CTGGAG | 2 cut(s) | 171, 218 |
| HgaI | GACGC | 1 cut(s) | 131 |
| Hin1II | CATG | 2 cut(s) | 172, 425 |
| HindIII | AAGCTT | 1 cut(s) | 297 |
| HphI | GGTGA | 2 cut(s) | 257, 400 |
| Hpy188I | TCNGA | 2 cut(s) | 105, 138 |
| Hpy188III | TCNNGA | 2 cut(s) | 206, 219 |
| Hpy99I | CGWCG | 1 cut(s) | 29 |
| HpyAV | CCTTC | 4 cut(s) | 85, 115, 166, 304 |
| HpyCH4III | ACNGT | 3 cut(s) | 25, 229, 264 |
| HpyCH4V | TGCA | 4 cut(s) | 20, 212, 334, 363 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 26 |
| HpyF3I | CTNAG | 2 cut(s) | 48, 453 |
| Hsp92II | CATG | 2 cut(s) | 172, 425 |
| Kzo9I | GATC | 1 cut(s) | 417 |
| LmnI | GCTCC | 4 cut(s) | 59, 139, 152, 286 |
| LweI | GCATC | 3 cut(s) | 115, 121, 199 |
| MaeIII | GTNAC | 2 cut(s) | 258, 388 |
| MalI | GATC | 1 cut(s) | 419 |
| MboI | GATC | 1 cut(s) | 417 |
| MboII | GAAGA | 6 cut(s) | 100, 130, 151, 157, 358, 361 |
| MflI | RGATCY | 1 cut(s) | 417 |
| MhlI | GDGCHC | 1 cut(s) | 452 |
| MluCI | AATT | 1 cut(s) | 358 |
| MnlI | CCTC | 1 cut(s) | 166 |
| MslI | CAYNNNNRTG | 2 cut(s) | 167, 426 |
| MspA1I | CMGCKG | 1 cut(s) | 149 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 26 |
| NdeII | GATC | 1 cut(s) | 417 |
| NlaIII | CATG | 2 cut(s) | 172, 425 |
| NlaIV | GGNNCC | 2 cut(s) | 61, 154 |
| NmuCI | GTSAC | 2 cut(s) | 258, 388 |
| Psp124BI | GAGCTC | 1 cut(s) | 452 |
| PspFI | CCCAGC | 1 cut(s) | 55 |
| PspN4I | GGNNCC | 2 cut(s) | 61, 154 |
| PspPI | GGNCC | 1 cut(s) | 221 |
| PsuI | RGATCY | 1 cut(s) | 417 |
| PvuII | CAGCTG | 1 cut(s) | 149 |
| RseI | CAYNNNNRTG | 2 cut(s) | 167, 426 |
| SacI | GAGCTC | 1 cut(s) | 452 |
| Sau3AI | GATC | 1 cut(s) | 417 |
| Sau96I | GGNCC | 1 cut(s) | 221 |
| SduI | GDGCHC | 1 cut(s) | 452 |
| SfaNI | GCATC | 3 cut(s) | 115, 121, 199 |
| SinI | GGWCC | 1 cut(s) | 221 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 167, 426 |
| SmlI | CTYRAG | 1 cut(s) | 11 |
| SmoI | CTYRAG | 1 cut(s) | 11 |
| Sse9I | AATT | 1 cut(s) | 358 |
| SsiI | CCGC | 3 cut(s) | 181, 368, 434 |
| SstI | GAGCTC | 1 cut(s) | 452 |
| StyI | CCWWGG | 1 cut(s) | 63 |
| TaaI | ACNGT | 3 cut(s) | 25, 229, 264 |
| TaqII | GACCGA | 1 cut(s) | 238 |
| TasI | AATT | 1 cut(s) | 358 |
| TscAI | CASTG | 3 cut(s) | 267, 370, 390 |
| TseFI | GTSAC | 2 cut(s) | 258, 388 |
| Tsp45I | GTSAC | 2 cut(s) | 258, 388 |
| TspDTI | ATGAA | 6 cut(s) | 17, 101, 151, 157, 336, 444 |
| TspRI | CASTG | 3 cut(s) | 267, 370, 390 |
| VpaK11BI | GGWCC | 1 cut(s) | 221 |