high mobility group
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0100971 |
| rosa_laevigata | RLG00000017032 |
| rosa_multiflora | Rmu_co8514483.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00141690 |
| rosa_rugosa | Rorug02G0094500 |
| rosa_samantha | Rh2AG141800 Rh2BG147000 Rh2CG148300 Rh2DG147500 |
| rosa_wichuraiana | Rw2G011130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 97, 284, 350 |
| AclWI | GGATC | 1 cut(s) | 328 |
| AcuI | CTGAAG | 1 cut(s) | 306 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 146 |
| AgsI | TTSAA | 2 cut(s) | 109, 219 |
| Alw21I | GWGCWC | 1 cut(s) | 368 |
| AlwI | GGATC | 1 cut(s) | 328 |
| AspS9I | GGNCC | 1 cut(s) | 137 |
| AsuHPI | GGTGA | 2 cut(s) | 173, 316 |
| AvaII | GGWCC | 1 cut(s) | 137 |
| BanII | GRGCYC | 1 cut(s) | 368 |
| Bbv12I | GWGCWC | 1 cut(s) | 368 |
| Bme18I | GGWCC | 1 cut(s) | 137 |
| BmgT120I | GGNCC | 1 cut(s) | 137 |
| BmiI | GGNNCC | 1 cut(s) | 70 |
| BmsI | GCATC | 3 cut(s) | 31, 37, 115 |
| BpmI | CTGGAG | 2 cut(s) | 87, 134 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 146 |
| Bse1I | ACTGG | 1 cut(s) | 117 |
| BseGI | GGATG | 1 cut(s) | 46 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 146 |
| BseNI | ACTGG | 1 cut(s) | 117 |
| BseRI | GAGGAG | 1 cut(s) | 104 |
| BsiHKAI | GWGCWC | 1 cut(s) | 368 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 146 |
| Bsp1286I | GDGCHC | 1 cut(s) | 368 |
| Bsp143I | GATC | 1 cut(s) | 333 |
| BspACI | CCGC | 3 cut(s) | 97, 284, 350 |
| BspLI | GGNNCC | 1 cut(s) | 70 |
| BspPI | GGATC | 1 cut(s) | 328 |
| BsrI | ACTGG | 1 cut(s) | 117 |
| BssMI | GATC | 1 cut(s) | 333 |
| Bst4CI | ACNGT | 2 cut(s) | 145, 180 |
| BstDEI | CTNAG | 1 cut(s) | 369 |
| BstF5I | GGATG | 1 cut(s) | 46 |
| BstKTI | GATC | 1 cut(s) | 336 |
| BstMBI | GATC | 1 cut(s) | 333 |
| BstX2I | RGATCY | 1 cut(s) | 333 |
| BstYI | RGATCY | 1 cut(s) | 333 |
| BtsCI | GGATG | 1 cut(s) | 46 |
| BtsI | GCAGTG | 1 cut(s) | 286 |
| BtsIMutI | CAGTG | 3 cut(s) | 176, 286, 306 |
| Cfr13I | GGNCC | 1 cut(s) | 137 |
| CseI | GACGC | 1 cut(s) | 47 |
| CviAII | CATG | 2 cut(s) | 85, 338 |
| DdeI | CTNAG | 1 cut(s) | 369 |
| DpnI | GATC | 1 cut(s) | 335 |
| DpnII | GATC | 1 cut(s) | 333 |
| Ecl136II | GAGCTC | 1 cut(s) | 366 |
| Eco24I | GRGCYC | 1 cut(s) | 368 |
| Eco47I | GGWCC | 1 cut(s) | 137 |
| Eco53kI | GAGCTC | 1 cut(s) | 366 |
| Eco57I | CTGAAG | 1 cut(s) | 306 |
| EcoICRI | GAGCTC | 1 cut(s) | 366 |
| EcoT38I | GRGCYC | 1 cut(s) | 368 |
| FaeI | CATG | 2 cut(s) | 88, 341 |
| FaiI | YATR | 6 cut(s) | 86, 204, 237, 248, 258, 339 |
| FatI | CATG | 2 cut(s) | 84, 337 |
| FauI | CCCGC | 1 cut(s) | 343 |
| FokI | GGATG | 1 cut(s) | 53 |
| FriOI | GRGCYC | 1 cut(s) | 368 |
| GsuI | CTGGAG | 2 cut(s) | 87, 134 |
| HgaI | GACGC | 1 cut(s) | 47 |
| Hin1II | CATG | 2 cut(s) | 88, 341 |
| HindIII | AAGCTT | 1 cut(s) | 213 |
| HphI | GGTGA | 2 cut(s) | 173, 316 |
| Hpy188I | TCNGA | 2 cut(s) | 21, 54 |
| Hpy188III | TCNNGA | 2 cut(s) | 122, 135 |
| HpyAV | CCTTC | 3 cut(s) | 31, 82, 220 |
| HpyCH4III | ACNGT | 2 cut(s) | 145, 180 |
| HpyCH4V | TGCA | 3 cut(s) | 128, 250, 279 |
| HpyF3I | CTNAG | 1 cut(s) | 369 |
| Hsp92II | CATG | 2 cut(s) | 88, 341 |
| Kzo9I | GATC | 1 cut(s) | 333 |
| LmnI | GCTCC | 3 cut(s) | 55, 68, 202 |
| LpnPI | CCDG | 8 cut(s) | 51, 75, 98, 120, 135, 141, 236, 341 |
| LweI | GCATC | 3 cut(s) | 31, 37, 115 |
| MaeIII | GTNAC | 2 cut(s) | 174, 304 |
| MalI | GATC | 1 cut(s) | 335 |
| MboI | GATC | 1 cut(s) | 333 |
| MboII | GAAGA | 6 cut(s) | 16, 46, 67, 73, 274, 277 |
| MflI | RGATCY | 1 cut(s) | 333 |
| MhlI | GDGCHC | 1 cut(s) | 368 |
| MluCI | AATT | 1 cut(s) | 274 |
| MnlI | CCTC | 2 cut(s) | 82, 216 |
| MslI | CAYNNNNRTG | 2 cut(s) | 83, 342 |
| MspA1I | CMGCKG | 1 cut(s) | 65 |
| NdeII | GATC | 1 cut(s) | 333 |
| NlaIII | CATG | 2 cut(s) | 88, 341 |
| NlaIV | GGNNCC | 1 cut(s) | 70 |
| NmuCI | GTSAC | 2 cut(s) | 174, 304 |
| Psp124BI | GAGCTC | 1 cut(s) | 368 |
| PspN4I | GGNNCC | 1 cut(s) | 70 |
| PspPI | GGNCC | 1 cut(s) | 137 |
| PsuI | RGATCY | 1 cut(s) | 333 |
| PvuII | CAGCTG | 1 cut(s) | 65 |
| RseI | CAYNNNNRTG | 2 cut(s) | 83, 342 |
| SacI | GAGCTC | 1 cut(s) | 368 |
| Sau3AI | GATC | 1 cut(s) | 333 |
| Sau96I | GGNCC | 1 cut(s) | 137 |
| SduI | GDGCHC | 1 cut(s) | 368 |
| SfaNI | GCATC | 3 cut(s) | 31, 37, 115 |
| SinI | GGWCC | 1 cut(s) | 137 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 83, 342 |
| Sse9I | AATT | 1 cut(s) | 274 |
| SsiI | CCGC | 3 cut(s) | 97, 284, 350 |
| SstI | GAGCTC | 1 cut(s) | 368 |
| TaaI | ACNGT | 2 cut(s) | 145, 180 |
| TaqI | TCGA | 1 cut(s) | 207 |
| TaqII | GACCGA | 1 cut(s) | 154 |
| TasI | AATT | 1 cut(s) | 274 |
| TscAI | CASTG | 3 cut(s) | 183, 286, 306 |
| TseFI | GTSAC | 2 cut(s) | 174, 304 |
| Tsp45I | GTSAC | 2 cut(s) | 174, 304 |
| TspDTI | ATGAA | 5 cut(s) | 17, 67, 73, 252, 360 |
| TspRI | CASTG | 3 cut(s) | 183, 286, 306 |
| VpaK11BI | GGWCC | 1 cut(s) | 137 |