Rh2CG243300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
25489304 .. 25489573
270 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG243300.1

Sequence Viewer

Length: 270 bp
ATGTCAGTTGAAGCTTTAGCAATGGCAGGCGTAGACTATAATAAGTGCCACATCAACCTTGAAGAGAAAGAAGGAAGAGACAAAGATCATACACCCCAGTATCTTCTGGCTGAGCAAAATTCCAATGACAGAAGTGAAAGGAATGAGAAGAACATGTTGGCGGTAGAAAATCAGCAAGAGAAGACAAATGTTGAAGCTTGGCCTGAGTTCCTCAATTGCATGCCACCTGAAATTTCTGTCGTTAAACAAGATTGCAGGGAAGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

89

Amino Acids

10.29

Weight (kDa)

4.65

Isoelectric Point (pI)

61.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018913)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 33
AciI CCGC 1 cut(s) 161
AcsI RAATTY 2 cut(s) 118, 231
AflIII ACRYGT 1 cut(s) 153
AgsI TTSAA 3 cut(s) 11, 62, 194
AjuI GAANNNNNNNTTGG 2 cut(s) 140, 172
AluBI AGCT 2 cut(s) 14, 197
AluI AGCT 2 cut(s) 14, 197
Alw26I GTCTC 1 cut(s) 72
AoxI GGCC 1 cut(s) 200
ApoI RAATTY 2 cut(s) 118, 231
BaeI ACNNNNGTAYC 2 cut(s) 83, 116
BbsI GAAGAC 1 cut(s) 188
BcoDI GTCTC 1 cut(s) 72
BlpI GCTNAGC 1 cut(s) 111
BmrI ACTGGG 1 cut(s) 91
BmuI ACTGGG 1 cut(s) 91
BpiI GAAGAC 1 cut(s) 188
Bpu1102I GCTNAGC 1 cut(s) 111
Bse1I ACTGG 1 cut(s) 97
Bse3DI GCAATG 1 cut(s) 27
BseMI GCAATG 1 cut(s) 27
BseMII CTCAG 2 cut(s) 102, 195
BseNI ACTGG 1 cut(s) 97
BshFI GGCC 1 cut(s) 202
BsmAI GTCTC 1 cut(s) 72
BsnI GGCC 1 cut(s) 202
Bsp143I GATC 1 cut(s) 85
Bsp1720I GCTNAGC 1 cut(s) 111
BspACI CCGC 1 cut(s) 161
BspANI GGCC 1 cut(s) 202
BspCNI CTCAG 2 cut(s) 103, 196
BsrDI GCAATG 1 cut(s) 27
BsrI ACTGG 1 cut(s) 97
BssMI GATC 1 cut(s) 85
Bst6I CTCTTC 2 cut(s) 57, 70
BstC8I GCNNGC 2 cut(s) 28, 221
BstDEI CTNAG 2 cut(s) 111, 204
BstKTI GATC 1 cut(s) 88
BstMAI GTCTC 1 cut(s) 72
BstMBI GATC 1 cut(s) 85
BstNSI RCATGY 2 cut(s) 157, 223
BstV2I GAAGAC 1 cut(s) 188
BsuRI GGCC 1 cut(s) 202
Cac8I GCNNGC 2 cut(s) 28, 221
CviAII CATG 2 cut(s) 154, 220
CviJI RGCY 4 cut(s) 14, 110, 197, 202
CviKI_1 RGCY 4 cut(s) 14, 110, 197, 202
DdeI CTNAG 2 cut(s) 111, 204
DpnI GATC 1 cut(s) 87
DpnII GATC 1 cut(s) 85
Eam1104I CTCTTC 2 cut(s) 57, 70
EarI CTCTTC 2 cut(s) 57, 70
FaeI CATG 2 cut(s) 157, 223
FaiI YATR 4 cut(s) 39, 90, 155, 221
FatI CATG 2 cut(s) 153, 219
FblI GTMKAC 1 cut(s) 33
HaeIII GGCC 1 cut(s) 202
Hin1II CATG 2 cut(s) 157, 223
HindIII AAGCTT 2 cut(s) 12, 195
Hpy166II GTNNAC 1 cut(s) 34
Hpy8I GTNNAC 1 cut(s) 34
HpyAV CCTTC 1 cut(s) 65
HpyCH4V TGCA 2 cut(s) 219, 255
HpyF3I CTNAG 2 cut(s) 111, 204
Hsp92II CATG 2 cut(s) 157, 223
Kzo9I GATC 1 cut(s) 85
LpnPI CCDG 6 cut(s) 12, 92, 110, 216, 240, 241
MalI GATC 1 cut(s) 87
MboI GATC 1 cut(s) 85
MboII GAAGA 5 cut(s) 74, 87, 95, 160, 193
MfeI CAATTG 1 cut(s) 214
MluCI AATT 4 cut(s) 118, 214, 231, 264
MnlI CCTC 1 cut(s) 221
MseI TTAA 2 cut(s) 243, 268
MunI CAATTG 1 cut(s) 214
NdeII GATC 1 cut(s) 85
NlaIII CATG 2 cut(s) 157, 223
NspI RCATGY 2 cut(s) 157, 223
PaeI GCATGC 1 cut(s) 223
PciI ACATGT 1 cut(s) 153
PscI ACATGT 1 cut(s) 153
SaqAI TTAA 2 cut(s) 243, 268
Sau3AI GATC 1 cut(s) 85
SetI ASST 4 cut(s) 16, 60, 199, 229
SphI GCATGC 1 cut(s) 223
Sse9I AATT 4 cut(s) 118, 214, 231, 264
SsiI CCGC 1 cut(s) 161
TasI AATT 4 cut(s) 118, 214, 231, 264
Tru1I TTAA 2 cut(s) 243, 268
Tru9I TTAA 2 cut(s) 243, 268
XapI RAATTY 2 cut(s) 118, 231
XceI RCATGY 2 cut(s) 157, 223
XmiI GTMKAC 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.