Polygalacturonase-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0004926.1_g000014 Rmu_sc0008355.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00128690 |
| rosa_samantha | Rh2CG262900 Rh2DG265400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 105 |
| AcsI | RAATTY | 1 cut(s) | 42 |
| AgsI | TTSAA | 1 cut(s) | 149 |
| AoxI | GGCC | 1 cut(s) | 81 |
| ApoI | RAATTY | 1 cut(s) | 42 |
| AspLEI | GCGC | 1 cut(s) | 101 |
| BccI | CCATC | 1 cut(s) | 38 |
| BsaAI | YACGTR | 1 cut(s) | 122 |
| BsaWI | WCCGGW | 1 cut(s) | 35 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 99, 129 |
| Bse1I | ACTGG | 1 cut(s) | 67 |
| BseNI | ACTGG | 1 cut(s) | 67 |
| BshFI | GGCC | 1 cut(s) | 83 |
| BsiSI | CCGG | 2 cut(s) | 36, 87 |
| BsnI | GGCC | 1 cut(s) | 83 |
| Bsp143I | GATC | 1 cut(s) | 191 |
| BspACI | CCGC | 1 cut(s) | 105 |
| BspANI | GGCC | 1 cut(s) | 83 |
| BsrI | ACTGG | 1 cut(s) | 67 |
| BssMI | GATC | 1 cut(s) | 191 |
| Bst4CI | ACNGT | 1 cut(s) | 115 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 96 |
| BstBAI | YACGTR | 1 cut(s) | 122 |
| BstC8I | GCNNGC | 1 cut(s) | 103 |
| BstEII | GGTNACC | 1 cut(s) | 25 |
| BstHHI | GCGC | 1 cut(s) | 101 |
| BstKTI | GATC | 1 cut(s) | 194 |
| BstMBI | GATC | 1 cut(s) | 191 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 96, 107 |
| BstNSI | RCATGY | 1 cut(s) | 17 |
| BstPI | GGTNACC | 1 cut(s) | 25 |
| BstSNI | TACGTA | 1 cut(s) | 122 |
| BsuRI | GGCC | 1 cut(s) | 83 |
| BtsIMutI | CAGTG | 1 cut(s) | 60 |
| Cac8I | GCNNGC | 1 cut(s) | 103 |
| CfoI | GCGC | 1 cut(s) | 101 |
| CseI | GACGC | 1 cut(s) | 126 |
| CviAII | CATG | 1 cut(s) | 14 |
| CviJI | RGCY | 1 cut(s) | 83 |
| CviKI_1 | RGCY | 1 cut(s) | 83 |
| DpnI | GATC | 1 cut(s) | 193 |
| DpnII | GATC | 1 cut(s) | 191 |
| Eco105I | TACGTA | 1 cut(s) | 122 |
| Eco147I | AGGCCT | 1 cut(s) | 83 |
| Eco91I | GGTNACC | 1 cut(s) | 25 |
| EcoO65I | GGTNACC | 1 cut(s) | 25 |
| EcoRI | GAATTC | 1 cut(s) | 42 |
| FaeI | CATG | 1 cut(s) | 17 |
| FaiI | YATR | 2 cut(s) | 15, 159 |
| FatI | CATG | 1 cut(s) | 13 |
| GlaI | GCGC | 1 cut(s) | 100 |
| HaeIII | GGCC | 1 cut(s) | 83 |
| HapII | CCGG | 2 cut(s) | 36, 87 |
| HgaI | GACGC | 1 cut(s) | 126 |
| HhaI | GCGC | 1 cut(s) | 101 |
| Hin1II | CATG | 1 cut(s) | 17 |
| Hin6I | GCGC | 1 cut(s) | 99 |
| HinP1I | GCGC | 1 cut(s) | 99 |
| HincII | GTYRAC | 1 cut(s) | 141 |
| HindII | GTYRAC | 1 cut(s) | 141 |
| HpaII | CCGG | 2 cut(s) | 36, 87 |
| Hpy166II | GTNNAC | 1 cut(s) | 141 |
| Hpy188III | TCNNGA | 1 cut(s) | 47 |
| Hpy8I | GTNNAC | 1 cut(s) | 141 |
| HpyCH4III | ACNGT | 1 cut(s) | 115 |
| HpyCH4IV | ACGT | 1 cut(s) | 121 |
| HpyCH4V | TGCA | 2 cut(s) | 13, 78 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 96, 107 |
| HpySE526I | ACGT | 1 cut(s) | 121 |
| Hsp92II | CATG | 1 cut(s) | 17 |
| HspAI | GCGC | 1 cut(s) | 99 |
| Kzo9I | GATC | 1 cut(s) | 191 |
| LmnI | GCTCC | 1 cut(s) | 107 |
| LpnPI | CCDG | 4 cut(s) | 48, 49, 100, 115 |
| MaeII | ACGT | 1 cut(s) | 121 |
| MaeIII | GTNAC | 1 cut(s) | 25 |
| MalI | GATC | 1 cut(s) | 193 |
| MboI | GATC | 1 cut(s) | 191 |
| MluCI | AATT | 3 cut(s) | 42, 132, 154 |
| MnlI | CCTC | 1 cut(s) | 94 |
| MslI | CAYNNNNRTG | 1 cut(s) | 18 |
| MspA1I | CMGCKG | 1 cut(s) | 105 |
| MspI | CCGG | 2 cut(s) | 36, 87 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 96, 107 |
| NdeII | GATC | 1 cut(s) | 191 |
| NlaIII | CATG | 1 cut(s) | 17 |
| NspI | RCATGY | 1 cut(s) | 17 |
| PceI | AGGCCT | 1 cut(s) | 83 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 127 |
| Ppu21I | YACGTR | 1 cut(s) | 122 |
| PspEI | GGTNACC | 1 cut(s) | 25 |
| RseI | CAYNNNNRTG | 1 cut(s) | 18 |
| Sau3AI | GATC | 1 cut(s) | 191 |
| SetI | ASST | 3 cut(s) | 96, 124, 130 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 18 |
| SnaBI | TACGTA | 1 cut(s) | 122 |
| Sse9I | AATT | 3 cut(s) | 42, 132, 154 |
| SseBI | AGGCCT | 1 cut(s) | 83 |
| SsiI | CCGC | 1 cut(s) | 105 |
| StuI | AGGCCT | 1 cut(s) | 83 |
| TaaI | ACNGT | 1 cut(s) | 115 |
| TaiI | ACGT | 1 cut(s) | 124 |
| TaqI | TCGA | 1 cut(s) | 130 |
| TasI | AATT | 3 cut(s) | 42, 132, 154 |
| TscAI | CASTG | 1 cut(s) | 67 |
| TspGWI | ACGGA | 1 cut(s) | 66 |
| TspRI | CASTG | 1 cut(s) | 67 |
| XapI | RAATTY | 1 cut(s) | 42 |
| XceI | RCATGY | 1 cut(s) | 17 |