Rh2DG556900

Catalytic subunit of pyrophosphate--fructose 6-phosphate 1-phosphotransferase. Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
78669714 .. 78670412
699 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG556900.1

Sequence Viewer

Length: 579 bp
ATGCTTTCCATAACGAACTCTCCGCTTCGAAAGCCAAAACCGCCACTCCACACACATTCTACCTCTTCACTCTTCTTCTCCCTCTCTCTCTCTCTCCCACACAACTTTGACGGCGACCATGTCCTCCTCCACCGCCAATGCCAAGGCCGTCCTGGCCGCTCCGCCTCCGTCTACAGCGAAGTCCAAACCAGCCGTCTCGACGTTCTCCTTCCCCTCCCCTCCGTCCTCAAAGCCCCCTTCTCCGTAGTCGACCGCCCTAAAAGCTCCGCCGCCGGAAATCCAGATGAGATTGCCAAGTTGTTCCCTAACCTATTCGGCCAGCCCTTGGCGTCACTAAACGCCGGTGATGCTTCATCGGCTCTGTCAAAGGATAAGAGTCTGAAGATCGGAGTTGTTCTCTCCGGTGGACACAATGTGATTTCTGGGATTTTCGGTGAGGGCCGGGTGACCTTGTGGCTTCTTATGTCAGTTTCAAATATATTGGCATTGGCATCGAAGAGTTTGTATAATTTTTTTTTTTGTATTTTTTTTTTTTCCAATTATGTGTGTGTTAGATTACTTGCAGCAGCGTACTACTAG

Protein Analysis

192

Amino Acids

20.81

Weight (kDa)

9.55

Isoelectric Point (pI)

34.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015804)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G04040
fragaria_vesca FvH4_6g42470
malus_domestica MD09G1112800.v1.1
prunus_persica Prupe.3G211800_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0158381 RchiOBHm_Chr4g0419181
rosa_laevigata RLG00000021081
rosa_multiflora Rmu_sc0001826.1_g000016 Rmu_sc0005921.1_g000001
rosa_roxburghii Rroxscaffold_2G00091450
rosa_rugosa Rorug02G0467400
rosa_samantha Rh2DG556900 Rh4DG218400
rosa_wichuraiana Rw2G044220 Rw4G018730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 325
AccBSI CCGCTC 1 cut(s) 159
AccI GTMKAC 2 cut(s) 171, 249
AciI CCGC 8 cut(s) 23, 41, 133, 157, 162, 253, 267, 270
AcoI YGGCCR 2 cut(s) 154, 316
AcuI CTGAAG 1 cut(s) 401
AcyI GRCGYC 1 cut(s) 329
AdeI CACNNNGTG 1 cut(s) 415
AfaI GTAC 1 cut(s) 572
AfiI CCNNNNNNNGG 1 cut(s) 325
AgsI TTSAA 1 cut(s) 474
AjnI CCWGG 1 cut(s) 151
AluBI AGCT 1 cut(s) 264
AluI AGCT 1 cut(s) 264
Alw26I GTCTC 1 cut(s) 200
AoxI GGCC 4 cut(s) 145, 154, 316, 439
ApeKI GCWGC 2 cut(s) 563, 566
ArsI GACNNNNNNTTYG 2 cut(s) 178, 210
AspS9I GGNCC 1 cut(s) 439
AsuC2I CCSGG 1 cut(s) 443
AsuHPI GGTGA 3 cut(s) 356, 446, 457
AsuII TTCGAA 1 cut(s) 28
BbvI GCAGC 1 cut(s) 575
BceAI ACGGC 3 cut(s) 127, 132, 177
BcgI CGANNNNNNTGC 2 cut(s) 474, 508
BciT130I CCWGG 1 cut(s) 153
BcnI CCSGG 1 cut(s) 443
BcoDI GTCTC 1 cut(s) 200
BfaI CTAG 1 cut(s) 577
BfmI CTRYAG 1 cut(s) 172
BglI GCCNNNNNGGC 1 cut(s) 153
BisI GCNGC 4 cut(s) 157, 270, 564, 567
BlsI GCNGC 4 cut(s) 158, 271, 565, 568
Bme1390I CCNGG 2 cut(s) 153, 443
BmgT120I GGNCC 1 cut(s) 439
BmrFI CCNGG 2 cut(s) 153, 443
BmsI GCATC 2 cut(s) 337, 500
BplI GAGNNNNNCTC 2 cut(s) 381, 413
Bpu14I TTCGAA 1 cut(s) 28
BpuMI CCSGG 1 cut(s) 443
BsaHI GRCGYC 1 cut(s) 329
BsaJI CCNNGG 2 cut(s) 142, 324
BsaWI WCCGGW 1 cut(s) 401
BsaXI ACNNNNNCTCC 3 cut(s) 30, 34, 60
Bsc4I CCNNNNNNNGG 1 cut(s) 325
Bse118I RCCGGY 1 cut(s) 341
BseBI CCWGG 1 cut(s) 153
BseDI CCNNGG 2 cut(s) 142, 324
BseLI CCNNNNNNNGG 1 cut(s) 325
BseRI GAGGAG 1 cut(s) 116
BseXI GCAGC 1 cut(s) 575
Bsh1285I CGRYCG 1 cut(s) 253
BshFI GGCC 4 cut(s) 147, 156, 318, 441
BsiEI CGRYCG 1 cut(s) 253
BsiSI CCGG 4 cut(s) 273, 342, 402, 442
BslI CCNNNNNNNGG 1 cut(s) 325
BsmAI GTCTC 1 cut(s) 200
BsmBI CGTCTC 1 cut(s) 200
BsnI GGCC 4 cut(s) 147, 156, 318, 441
Bsp119I TTCGAA 1 cut(s) 28
Bsp143I GATC 1 cut(s) 384
BspACI CCGC 8 cut(s) 23, 41, 133, 157, 162, 253, 267, 270
BspANI GGCC 4 cut(s) 147, 156, 318, 441
BspT104I TTCGAA 1 cut(s) 28
BsrBI CCGCTC 1 cut(s) 159
BsrFI RCCGGY 1 cut(s) 341
BssAI RCCGGY 1 cut(s) 341
BssECI CCNNGG 2 cut(s) 142, 324
BssMI GATC 1 cut(s) 384
BssNI GRCGYC 1 cut(s) 329
BssT1I CCWWGG 2 cut(s) 142, 324
Bst2UI CCWGG 1 cut(s) 153
Bst6I CTCTTC 3 cut(s) 70, 77, 491
BstACI GRCGYC 1 cut(s) 329
BstBI TTCGAA 1 cut(s) 28
BstC8I GCNNGC 1 cut(s) 320
BstEII GGTNACC 1 cut(s) 445
BstKTI GATC 1 cut(s) 387
BstMAI GTCTC 1 cut(s) 200
BstMBI GATC 1 cut(s) 384
BstMCI CGRYCG 1 cut(s) 253
BstMWI GCNNNNNNNGC 6 cut(s) 31, 40, 153, 261, 347, 356
BstNI CCWGG 1 cut(s) 153
BstPI GGTNACC 1 cut(s) 445
BstSCI CCNGG 2 cut(s) 151, 441
BstSFI CTRYAG 1 cut(s) 172
BstV1I GCAGC 1 cut(s) 575
BsuRI GGCC 4 cut(s) 147, 156, 318, 441
Cac8I GCNNGC 1 cut(s) 320
Cfr10I RCCGGY 1 cut(s) 341
Cfr13I GGNCC 1 cut(s) 439
CseI GACGC 1 cut(s) 318
Csp6I GTAC 1 cut(s) 571
CviAII CATG 1 cut(s) 119
CviQI GTAC 1 cut(s) 571
DpnI GATC 1 cut(s) 386
DpnII GATC 1 cut(s) 384
DraIII CACNNNGTG 1 cut(s) 415
EaeI YGGCCR 2 cut(s) 154, 316
Eam1104I CTCTTC 3 cut(s) 70, 77, 491
EarI CTCTTC 3 cut(s) 70, 77, 491
EciI GGCGGA 2 cut(s) 151, 256
Eco130I CCWWGG 2 cut(s) 142, 324
Eco57I CTGAAG 1 cut(s) 401
Eco91I GGTNACC 1 cut(s) 445
EcoO65I GGTNACC 1 cut(s) 445
EcoRII CCWGG 1 cut(s) 151
EcoT14I CCWWGG 2 cut(s) 142, 324
ErhI CCWWGG 2 cut(s) 142, 324
Esp3I CGTCTC 1 cut(s) 200
FaeI CATG 1 cut(s) 122
FaiI YATR 6 cut(s) 11, 120, 464, 479, 507, 543
FatI CATG 1 cut(s) 118
FblI GTMKAC 2 cut(s) 171, 249
Fnu4HI GCNGC 4 cut(s) 157, 270, 564, 567
Fsp4HI GCNGC 4 cut(s) 157, 270, 564, 567
FspBI CTAG 1 cut(s) 577
GluI GCNGC 4 cut(s) 157, 270, 564, 567
HaeIII GGCC 4 cut(s) 147, 156, 318, 441
HapII CCGG 4 cut(s) 273, 342, 402, 442
HgaI GACGC 1 cut(s) 318
Hin1I GRCGYC 1 cut(s) 329
Hin1II CATG 1 cut(s) 122
HincII GTYRAC 1 cut(s) 250
HindII GTYRAC 1 cut(s) 250
HinfI GANTC 1 cut(s) 376
HpaII CCGG 4 cut(s) 273, 342, 402, 442
HphI GGTGA 3 cut(s) 356, 446, 457
Hpy166II GTNNAC 3 cut(s) 172, 250, 407
Hpy188I TCNGA 2 cut(s) 381, 389
Hpy188III TCNNGA 2 cut(s) 197, 281
Hpy8I GTNNAC 3 cut(s) 172, 250, 407
Hpy99I CGWCG 1 cut(s) 203
HpyAV CCTTC 2 cut(s) 218, 247
HpyCH4IV ACGT 1 cut(s) 201
HpyCH4V TGCA 1 cut(s) 563
HpyF10VI GCNNNNNNNGC 6 cut(s) 31, 40, 153, 261, 347, 356
HpySE526I ACGT 1 cut(s) 201
Hsp92I GRCGYC 1 cut(s) 329
Hsp92II CATG 1 cut(s) 122
Kzo9I GATC 1 cut(s) 384
LmnI GCTCC 2 cut(s) 164, 269
Lsp1109I GCAGC 1 cut(s) 575
LweI GCATC 2 cut(s) 337, 500
MaeI CTAG 1 cut(s) 577
MaeII ACGT 1 cut(s) 201
MaeIII GTNAC 2 cut(s) 330, 445
MalI GATC 1 cut(s) 386
MbiI CCGCTC 1 cut(s) 159
MboI GATC 1 cut(s) 384
MboII GAAGA 5 cut(s) 57, 64, 67, 394, 508
MluCI AATT 2 cut(s) 508, 538
MlyI GAGTC 1 cut(s) 385
MnlI CCTC 9 cut(s) 73, 92, 134, 137, 175, 224, 229, 236, 430
MspI CCGG 4 cut(s) 273, 342, 402, 442
MspR9I CCNGG 2 cut(s) 153, 443
MvaI CCWGG 1 cut(s) 153
MwoI GCNNNNNNNGC 6 cut(s) 31, 40, 153, 261, 347, 356
NciI CCSGG 1 cut(s) 443
NdeII GATC 1 cut(s) 384
NlaIII CATG 1 cut(s) 122
NmuCI GTSAC 2 cut(s) 330, 445
NspV TTCGAA 1 cut(s) 28
PflFI GACNNNGTC 1 cut(s) 119
PflMI CCANNNNNTGG 1 cut(s) 325
PkrI GCNGC 4 cut(s) 158, 271, 565, 568
PleI GAGTC 1 cut(s) 384
PpsI GAGTC 1 cut(s) 384
Psp6I CCWGG 1 cut(s) 151
PspEI GGTNACC 1 cut(s) 445
PspGI CCWGG 1 cut(s) 151
PspPI GGNCC 1 cut(s) 439
PsyI GACNNNGTC 1 cut(s) 119
RsaI GTAC 1 cut(s) 572
RsaNI GTAC 1 cut(s) 571
SalI GTCGAC 1 cut(s) 248
SatI GCNGC 4 cut(s) 157, 270, 564, 567
Sau3AI GATC 1 cut(s) 384
Sau96I GGNCC 1 cut(s) 439
SchI GAGTC 1 cut(s) 385
ScrFI CCNGG 2 cut(s) 153, 443
SetI ASST 5 cut(s) 65, 204, 266, 312, 452
SfaNI GCATC 2 cut(s) 337, 500
SfcI CTRYAG 1 cut(s) 172
SfiI GGCCNNNNNGGCC 1 cut(s) 153
SfuI TTCGAA 1 cut(s) 28
SgrAI CRCCGGYG 1 cut(s) 341
Sse9I AATT 2 cut(s) 508, 538
SsiI CCGC 8 cut(s) 23, 41, 133, 157, 162, 253, 267, 270
SspMI CTAG 1 cut(s) 577
StyD4I CCNGG 2 cut(s) 151, 441
StyI CCWWGG 2 cut(s) 142, 324
TaiI ACGT 1 cut(s) 204
TaqI TCGA 4 cut(s) 28, 198, 249, 494
TasI AATT 2 cut(s) 508, 538
TauI GCSGC 2 cut(s) 159, 272
TseFI GTSAC 2 cut(s) 330, 445
TseI GCWGC 2 cut(s) 563, 566
Tsp45I GTSAC 2 cut(s) 330, 445
TspDTI ATGAA 1 cut(s) 342
TspGWI ACGGA 3 cut(s) 157, 211, 232
Tth111I GACNNNGTC 1 cut(s) 119
Van91I CCANNNNNTGG 1 cut(s) 325
XcmI CCANNNNNNNNNTGG 1 cut(s) 149
XmiI GTMKAC 2 cut(s) 171, 249
XspI CTAG 1 cut(s) 577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.