Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0016230

Physical Location & Seq

Genomic Coordinates Forward (+)

85077736 .. 85079364

Gene Structure 1629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG620400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGATCAGAAAGAGACCAAACGACAGGAGCACCAACCGTCAACAACGGTCAACCCTCTTTCAAAAATGCACCAACCTCCGAGCTCTCAAGCAAGTCCATGCTTCCATGGTCGTCCATGGCTTCAATTCGAACCATTCCGCTCTCGGAGAGCTCATTTTCGCCAGCGCTATGGTGATTTCGGGCACCATTGGCTATGCCCACAAGTTGTTCGATCATATTACTGAACCAAACACCTTCATGTGGAACACTATGATCAGAGGCTCAGCTCAGAGCCTGAAACCACTCAATGCGGTGGTGTTATATACCCAGATGGAGAAGCGGGGTTCGAGGCCTGATGACTTCACTTTCCCATTTATTCTCAAGGCCTGCACTAAGCTTTGTTGGGTTAAGATGGGAATGGGGATTCATGGCAAGGTTGTGAGGTTTGGGTTTCAGTCAAATGCCTCTGTTAGGAATACCCTCATTGATTTTCATGCTAAATGTGGGGATTTGAGGGTTGCGACCGCACTTTGTGATGGCTCGGCCAAGAGGGATGTGGTGGCTTGGTCAGCATTGACAGCAGGGTATGCAAGAAGAGGGAAGCTGGATGCCGCGAGGCGGCTTTTCGATGAAATGCCTGTTAAGGATTTGGTTTCTTGGAATGTGATGATTACGGGGTACACAAAGCAAGGGGAGATGGAGAGTGCGAGGAAGTTGTTTGATGAGGTTCCGAGAAGAGATGTGGTGACTTGGAATGCAATGATCGCGGGCTATGTGCGCTGCGGGTTTATTGAGCAGGCATTGCAGATGTTTGAGGAGATGACAAGTCTGGGTGAGAAGCCTGATGAAGTGACAATGTTGAGTCTGTTGTCTGCTTGCGCAGATATTGGAGAGTTAGAAATTGGGGAAAGGATACATTCCTCTCTTCTAGAGATGGGTTCTGGGGAGATAAGCATCATACATGGAAATGCGCTTATAGATATGTATTCCAAGTGTGGCAGCATTGAAAGGGCACTTGAAGTGTTTCAGGGGATGAGGGAGAAGGATGTGTCTTCATGGAATTCAGTGATCGGAGGGCTGGCATTCCATGGCCATGCTGAAGAGTCGGTTAATCTGTTTGAAGAGATGCGGAGATTGAAAGTCAGGCCTGATGGGATCACATTTGTTGGAGTCTTGGTAGCTTGCAGTCATGCTGGGAAGGTTGAAGACGGGCGCGGATACTTTAGTCTCATGAGAAATGAGTACAAAATCAAGCCTAACATAAAGCATTATGGGTGTATGGTGGATCTCTTAGGGCGTGCTGGGCTACTAGATGAAGCATTTGACTGCATTGGAAACATGGAGATGCAACCCAATGCCATAGTTTGGAGGACTCTTCTTGGGGCTTGTAAGGTTCATGGAAATGTTGAGTTGGGCAGACGTGCAAACGAGCGGCTACTTGATATTAGAGGAGATGAGAGTGGGGATTTTGTACTCCTATCAAACATATATGCTTCAAGAGGCGAGTGGCATGGGGCTGAGGAGGTGAGAAAGCTAATGGACGACAGTGGGGTGAAGAAAGAGCCTGGCTTTAGCATAGTTGAAGCAGATGATAGTGCTCTCAAGCATTTTTGTTTCTATTCCAAATCTAAGTCAAACAGAGGATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

542

Amino Acids

60.51

Weight (kDa)

8.3

Isoelectric Point (pI)

38.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	76 - 125	4.6e-09	PPR repeat family
PPR_2	PF13041	209 - 238	1.5e-06	PPR repeat family
PPR	PF01535	211 - 240	4.8e-07	PPR repeat
PPR_2	PF13041	239 - 287	7.7e-14	PPR repeat family
PPR_1	PF12854	240 - 268	1.3e-06	PPR repeat
PPR	PF01535	242 - 271	6.1e-09	PPR repeat
PPR_2	PF13041	341 - 388	1.3e-08	PPR repeat family
PPR	PF01535	345 - 373	1e-05	PPR repeat
E_motif	PF20431	459 - 521	1.8e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016230)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15300
fragaria_vesca	FvH4_6g48130
malus_domestica	MD09G1053600.v1.1
prunus_persica	Prupe.3G264700_v2.0.a1
pyrus_communis	pycom111g04460
rosa_chinensis	RchiOBHm_Chr2g0167471
rosa_laevigata	RLG00000021722
rosa_multiflora	Rmu_sc0001206.1_g000036 Rmu_sc0043018.1_g000001
rosa_roxburghii	Rroxscaffold_2G00083470
rosa_rugosa	Rorug02G0530400
rosa_samantha	Rh2BG609100 Rh2CG580000 Rh2DG620400
rosa_wichuraiana	Rw2G049730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	859
AccB1I	GGYRCC	1 cut(s)	182
AccB7I	CCANNNNNTGG	1 cut(s)	1344
AccBSI	CCGCTC	2 cut(s)	140, 1411
AccII	CGCG	3 cut(s)	593, 746, 1194
AclWI	GGATC	2 cut(s)	1142, 1272
AcoI	YGGCCR	2 cut(s)	522, 1069
AcsI	RAATTY	1 cut(s)	1039
AcuI	CTGAAG	1 cut(s)	1098
AdeI	CACNNNGTG	1 cut(s)	512
AfaI	GTAC	3 cut(s)	659, 1223, 1452
AfeI	AGCGCT	1 cut(s)	166
AfiI	CCNNNNNNNGG	4 cut(s)	240, 450, 597, 1344
AgsI	TTSAA	9 cut(s)	62, 124, 986, 998, 1100, 1117, 1184, 1476, 1562
AjiI	CACGTC	1 cut(s)	1400
AjnI	CCWGG	1 cut(s)	1543
AluBI	AGCT	7 cut(s)	83, 151, 266, 376, 583, 1160, 1513
AluI	AGCT	7 cut(s)	83, 151, 266, 376, 583, 1160, 1513
Alw21I	GWGCWC	4 cut(s)	32, 85, 153, 1579
Alw26I	GTCTC	2 cut(s)	7, 1211
AlwI	GGATC	2 cut(s)	1142, 1272
AlwNI	CAGNNNCTG	1 cut(s)	274
Aor51HI	AGCGCT	1 cut(s)	166
AoxI	GGCC	5 cut(s)	329, 363, 522, 1069, 1124
ApeKI	GCWGC	2 cut(s)	759, 978
ApoI	RAATTY	1 cut(s)	1039
Asp700I	GAANNNNTTC	1 cut(s)	1002
AspLEI	GCGC	5 cut(s)	167, 759, 860, 952, 1194
AsuHPI	GGTGA	5 cut(s)	184, 736, 824, 1516, 1543
AsuII	TTCGAA	1 cut(s)	128
BaeGI	GKGCMC	2 cut(s)	185, 994
BaeI	ACNNNNGTAYC	2 cut(s)	1189, 1222
BalI	TGGCCA	1 cut(s)	1071
BanI	GGYRCC	1 cut(s)	182
BanII	GRGCYC	2 cut(s)	85, 153
BbsI	GAAGAC	2 cut(s)	1023, 1191
Bbv12I	GWGCWC	4 cut(s)	32, 85, 153, 1579
BbvCI	CCTCAGC	1 cut(s)	1497
BbvI	GCAGC	2 cut(s)	746, 990
BccI	CCATC	6 cut(s)	304, 385, 509, 670, 907, 1124
BciT130I	CCWGG	1 cut(s)	1545
BciVI	GTATCC	2 cut(s)	885, 1190
BclI	TGATCA	2 cut(s)	3, 252
BcoDI	GTCTC	2 cut(s)	7, 1211
BfaI	CTAG	2 cut(s)	908, 1289
BfoI	RGCGCY	1 cut(s)	168
BfuI	GTATCC	2 cut(s)	885, 1190
BisI	GCNGC	5 cut(s)	591, 599, 760, 979, 1412
BlpI	GCTNAGC	1 cut(s)	262
BlsI	GCNGC	5 cut(s)	592, 600, 761, 980, 1413
Bme1390I	CCNGG	1 cut(s)	1545
BmgBI	CACGTC	1 cut(s)	1400
BmiI	GGNNCC	2 cut(s)	184, 708
BmrFI	CCNGG	1 cut(s)	1545
BmsI	GCATC	4 cut(s)	577, 942, 1095, 1314
BpiI	GAAGAC	2 cut(s)	1023, 1191
Bpu10I	CCTNAGC	1 cut(s)	1497
Bpu1102I	GCTNAGC	1 cut(s)	262
Bpu14I	TTCGAA	1 cut(s)	128
BpuEI	CTTGAG	3 cut(s)	71, 344, 1565
BsaBI	GATNNNNATC	1 cut(s)	932
BsaI	GGTCTC	1 cut(s)	7
BsaJI	CCNNGG	3 cut(s)	105, 115, 1066
BsaXI	ACNNNNNCTCC	2 cut(s)	1140, 1170
Bsc4I	CCNNNNNNNGG	4 cut(s)	240, 450, 597, 1344
Bse3DI	GCAATG	2 cut(s)	744, 779
Bse8I	GATNNNNATC	1 cut(s)	932
BseBI	CCWGG	1 cut(s)	1545
BseDI	CCNNGG	3 cut(s)	105, 115, 1066
BseGI	GGATG	5 cut(s)	538, 592, 1017, 1030, 1628
BseJI	GATNNNNATC	1 cut(s)	932
BseLI	CCNNNNNNNGG	4 cut(s)	240, 450, 597, 1344
BseMI	GCAATG	2 cut(s)	744, 779
BseMII	CTCAG	3 cut(s)	276, 281, 1488
BseRI	GAGGAG	3 cut(s)	809, 1443, 1514
BseSI	GKGCMC	2 cut(s)	185, 994
BseXI	GCAGC	2 cut(s)	746, 990
BseYI	CCCAGC	2 cut(s)	1172, 1280
BsgI	GTGCAG	1 cut(s)	352
Bsh1236I	CGCG	3 cut(s)	593, 746, 1194
Bsh1285I	CGRYCG	1 cut(s)	504
BshFI	GGCC	5 cut(s)	331, 365, 524, 1071, 1126
BshNI	GGYRCC	1 cut(s)	182
BsiEI	CGRYCG	1 cut(s)	504
BsiHKAI	GWGCWC	4 cut(s)	32, 85, 153, 1579
BslI	CCNNNNNNNGG	4 cut(s)	240, 450, 597, 1344
BsmAI	GTCTC	2 cut(s)	7, 1211
BsmI	GAATGC	2 cut(s)	739, 1061
BsnI	GGCC	5 cut(s)	331, 365, 524, 1071, 1126
Bso31I	GGTCTC	1 cut(s)	7
Bsp119I	TTCGAA	1 cut(s)	128
Bsp1286I	GDGCHC	6 cut(s)	32, 85, 153, 185, 994, 1579
Bsp143I	GATC	7 cut(s)	3, 211, 252, 741, 1047, 1134, 1264
Bsp1720I	GCTNAGC	1 cut(s)	262
Bsp19I	CCATGG	3 cut(s)	105, 115, 1066
BspANI	GGCC	5 cut(s)	331, 365, 524, 1071, 1126
BspCNI	CTCAG	3 cut(s)	275, 280, 1489
BspFNI	CGCG	3 cut(s)	593, 746, 1194
BspHI	TCATGA	1 cut(s)	1209
BspLI	GGNNCC	2 cut(s)	184, 708
BspPI	GGATC	2 cut(s)	1142, 1272
BspT104I	TTCGAA	1 cut(s)	128
BspT107I	GGYRCC	1 cut(s)	182
BspTNI	GGTCTC	1 cut(s)	7
BsrBI	CCGCTC	2 cut(s)	140, 1411
BsrDI	GCAATG	2 cut(s)	744, 779
BssECI	CCNNGG	3 cut(s)	105, 115, 1066
BssMI	GATC	7 cut(s)	3, 211, 252, 741, 1047, 1134, 1264
BssT1I	CCWWGG	3 cut(s)	105, 115, 1066
Bst2UI	CCWGG	1 cut(s)	1545
Bst4CI	ACNGT	3 cut(s)	38, 48, 1526
Bst6I	CTCTTC	6 cut(s)	568, 709, 909, 1074, 1095, 1359
BstAPI	GCANNNNNTGC	2 cut(s)	566, 781
BstBI	TTCGAA	1 cut(s)	128
BstC8I	GCNNGC	8 cut(s)	163, 367, 748, 777, 856, 1059, 1162, 1278
BstDEI	CTNAG	6 cut(s)	262, 267, 372, 1270, 1497, 1608
BstDSI	CCRYGG	3 cut(s)	105, 115, 1066
BstENI	CCTNNNNNAGG	1 cut(s)	448
BstF5I	GGATG	5 cut(s)	538, 592, 1017, 1030, 1628
BstFNI	CGCG	3 cut(s)	593, 746, 1194
BstH2I	RGCGCY	1 cut(s)	168
BstHHI	GCGC	5 cut(s)	167, 759, 860, 952, 1194
BstKTI	GATC	7 cut(s)	6, 214, 255, 744, 1050, 1137, 1267
BstMAI	GTCTC	2 cut(s)	7, 1211
BstMBI	GATC	7 cut(s)	3, 211, 252, 741, 1047, 1134, 1264
BstMCI	CGRYCG	1 cut(s)	504
BstMWI	GCNNNNNNNGC	8 cut(s)	189, 548, 557, 566, 743, 756, 781, 1282
BstNI	CCWGG	1 cut(s)	1545
BstSCI	CCNGG	1 cut(s)	1543
BstSLI	GKGCMC	2 cut(s)	185, 994
BstUI	CGCG	3 cut(s)	593, 746, 1194
BstV1I	GCAGC	2 cut(s)	746, 990
BstV2I	GAAGAC	2 cut(s)	1023, 1191
BstX2I	RGATCY	1 cut(s)	1264
BstXI	CCANNNNNNTGG	1 cut(s)	169
BstYI	RGATCY	1 cut(s)	1264
BsuI	GTATCC	2 cut(s)	885, 1190
BsuRI	GGCC	5 cut(s)	331, 365, 524, 1071, 1126
BtgI	CCRYGG	3 cut(s)	105, 115, 1066
BtrI	CACGTC	1 cut(s)	1400
BtsCI	GGATG	5 cut(s)	538, 592, 1017, 1030, 1628
BtsIMutI	CAGTG	2 cut(s)	1050, 1531
Cac8I	GCNNGC	8 cut(s)	163, 367, 748, 777, 856, 1059, 1162, 1278
CaiI	CAGNNNCTG	1 cut(s)	274
CciI	TCATGA	1 cut(s)	1209
CfoI	GCGC	5 cut(s)	167, 759, 860, 952, 1194
Csp6I	GTAC	3 cut(s)	658, 1222, 1451
CviQI	GTAC	3 cut(s)	658, 1222, 1451
DdeI	CTNAG	6 cut(s)	262, 267, 372, 1270, 1497, 1608
DpnI	GATC	7 cut(s)	5, 213, 254, 743, 1049, 1136, 1266
DpnII	GATC	7 cut(s)	3, 211, 252, 741, 1047, 1134, 1264
DraIII	CACNNNGTG	1 cut(s)	512
EaeI	YGGCCR	2 cut(s)	522, 1069
Eam1104I	CTCTTC	6 cut(s)	568, 709, 909, 1074, 1095, 1359
EarI	CTCTTC	6 cut(s)	568, 709, 909, 1074, 1095, 1359
Ecl136II	GAGCTC	2 cut(s)	83, 151
Eco130I	CCWWGG	3 cut(s)	105, 115, 1066
Eco147I	AGGCCT	3 cut(s)	331, 365, 1126
Eco24I	GRGCYC	2 cut(s)	85, 153
Eco31I	GGTCTC	1 cut(s)	7
Eco47III	AGCGCT	1 cut(s)	166
Eco53kI	GAGCTC	2 cut(s)	83, 151
Eco57I	CTGAAG	1 cut(s)	1098
EcoICRI	GAGCTC	2 cut(s)	83, 151
EcoNI	CCTNNNNNAGG	1 cut(s)	448
EcoRI	GAATTC	1 cut(s)	1039
EcoRII	CCWGG	1 cut(s)	1543
EcoT14I	CCWWGG	3 cut(s)	105, 115, 1066
EcoT38I	GRGCYC	2 cut(s)	85, 153
ErhI	CCWWGG	3 cut(s)	105, 115, 1066
FauI	CCCGC	3 cut(s)	312, 739, 755
FbaI	TGATCA	2 cut(s)	3, 252
Fnu4HI	GCNGC	5 cut(s)	591, 599, 760, 979, 1412
FokI	GGATG	4 cut(s)	545, 599, 1024, 1037
FriOI	GRGCYC	2 cut(s)	85, 153
Fsp4HI	GCNGC	5 cut(s)	591, 599, 760, 979, 1412
FspBI	CTAG	2 cut(s)	908, 1289
FspI	TGCGCA	1 cut(s)	859
GlaI	GCGC	5 cut(s)	166, 758, 859, 951, 1193
GluI	GCNGC	5 cut(s)	591, 599, 760, 979, 1412
GsaI	CCCAGC	2 cut(s)	1176, 1284
HaeII	RGCGCY	1 cut(s)	168
HaeIII	GGCC	5 cut(s)	331, 365, 524, 1071, 1126
HhaI	GCGC	5 cut(s)	167, 759, 860, 952, 1194
Hin6I	GCGC	5 cut(s)	165, 757, 858, 950, 1192
HinP1I	GCGC	5 cut(s)	165, 757, 858, 950, 1192
HincII	GTYRAC	2 cut(s)	41, 51
HindII	GTYRAC	2 cut(s)	41, 51
HindIII	AAGCTT	1 cut(s)	374
HinfI	GANTC	5 cut(s)	403, 841, 1082, 1149, 1351
HphI	GGTGA	5 cut(s)	184, 736, 824, 1516, 1543
Hpy166II	GTNNAC	3 cut(s)	41, 51, 660
Hpy188I	TCNGA	7 cut(s)	8, 80, 146, 257, 270, 711, 1052
Hpy188III	TCNNGA	3 cut(s)	908, 1210, 1476
Hpy8I	GTNNAC	3 cut(s)	41, 51, 660
HpyAV	CCTTC	3 cut(s)	244, 1015, 1171
HpyCH4III	ACNGT	3 cut(s)	38, 48, 1526
HpyCH4IV	ACGT	1 cut(s)	1399
HpyCH4V	TGCA	9 cut(s)	69, 369, 569, 737, 784, 1164, 1308, 1327, 1403
HpyF10VI	GCNNNNNNNGC	8 cut(s)	189, 548, 557, 566, 743, 756, 781, 1282
HpyF3I	CTNAG	6 cut(s)	262, 267, 372, 1270, 1497, 1608
HpySE526I	ACGT	1 cut(s)	1399
HspAI	GCGC	5 cut(s)	165, 757, 858, 950, 1192
Ksp22I	TGATCA	2 cut(s)	3, 252
Kzo9I	GATC	7 cut(s)	3, 211, 252, 741, 1047, 1134, 1264
LmnI	GCTCC	1 cut(s)	27
Lsp1109I	GCAGC	2 cut(s)	746, 990
LweI	GCATC	4 cut(s)	577, 942, 1095, 1314
MaeI	CTAG	2 cut(s)	908, 1289
MaeII	ACGT	1 cut(s)	1399
MaeIII	GTNAC	2 cut(s)	724, 829
MalI	GATC	7 cut(s)	5, 213, 254, 743, 1049, 1136, 1266
MbiI	CCGCTC	2 cut(s)	140, 1411
MboI	GATC	7 cut(s)	3, 211, 252, 741, 1047, 1134, 1264
MboII	GAAGA	9 cut(s)	585, 726, 896, 1023, 1091, 1112, 1196, 1346, 1546
MflI	RGATCY	1 cut(s)	1264
MhlI	GDGCHC	6 cut(s)	32, 85, 153, 185, 994, 1579
MlsI	TGGCCA	1 cut(s)	1071
MluCI	AATT	3 cut(s)	124, 879, 1039
MluNI	TGGCCA	1 cut(s)	1071
MlyI	GAGTC	4 cut(s)	850, 1091, 1158, 1345
MmeI	TCCRAC	1 cut(s)	1126
Mox20I	TGGCCA	1 cut(s)	1071
MroXI	GAANNNNTTC	1 cut(s)	1002
MscI	TGGCCA	1 cut(s)	1071
MseI	TTAA	4 cut(s)	387, 621, 1089, 1627
MslI	CAYNNNNRTG	5 cut(s)	236, 945, 1071, 1322, 1380
Msp20I	TGGCCA	1 cut(s)	1071
MspR9I	CCNGG	1 cut(s)	1545
Mva1269I	GAATGC	2 cut(s)	739, 1061
MvaI	CCWGG	1 cut(s)	1545
MvnI	CGCG	3 cut(s)	593, 746, 1194
MwoI	GCNNNNNNNGC	8 cut(s)	189, 548, 557, 566, 743, 756, 781, 1282
NcoI	CCATGG	3 cut(s)	105, 115, 1066
NdeII	GATC	7 cut(s)	3, 211, 252, 741, 1047, 1134, 1264
NlaIV	GGNNCC	2 cut(s)	184, 708
NmeAIII	GCCGAG	1 cut(s)	500
NmuCI	GTSAC	2 cut(s)	724, 829
NsbI	TGCGCA	1 cut(s)	859
NspV	TTCGAA	1 cut(s)	128
PagI	TCATGA	1 cut(s)	1209
PceI	AGGCCT	3 cut(s)	331, 365, 1126
PctI	GAATGC	2 cut(s)	739, 1061
PdmI	GAANNNNTTC	1 cut(s)	1002
PfeI	GAWTC	1 cut(s)	403
PflMI	CCANNNNNTGG	1 cut(s)	1344
PkrI	GCNGC	5 cut(s)	592, 600, 761, 980, 1413
PleI	GAGTC	4 cut(s)	849, 1090, 1157, 1345
PpsI	GAGTC	4 cut(s)	849, 1090, 1157, 1345
Psp124BI	GAGCTC	2 cut(s)	85, 153
Psp6I	CCWGG	1 cut(s)	1543
PspFI	CCCAGC	2 cut(s)	1172, 1280
PspGI	CCWGG	1 cut(s)	1543
PspN4I	GGNNCC	2 cut(s)	184, 708
PstNI	CAGNNNCTG	1 cut(s)	274
PsuI	RGATCY	1 cut(s)	1264
RsaI	GTAC	3 cut(s)	659, 1223, 1452
RsaNI	GTAC	3 cut(s)	658, 1222, 1451
RseI	CAYNNNNRTG	5 cut(s)	236, 945, 1071, 1322, 1380
SacI	GAGCTC	2 cut(s)	85, 153
SaqAI	TTAA	4 cut(s)	387, 621, 1089, 1627
SatI	GCNGC	5 cut(s)	591, 599, 760, 979, 1412
Sau3AI	GATC	7 cut(s)	3, 211, 252, 741, 1047, 1134, 1264
SchI	GAGTC	4 cut(s)	850, 1091, 1158, 1345
ScrFI	CCNGG	1 cut(s)	1545
SduI	GDGCHC	6 cut(s)	32, 85, 153, 185, 994, 1579
SfaNI	GCATC	4 cut(s)	577, 942, 1095, 1314
SfuI	TTCGAA	1 cut(s)	128
SmiMI	CAYNNNNRTG	5 cut(s)	236, 945, 1071, 1322, 1380
SmlI	CTYRAG	3 cut(s)	86, 359, 1580
SmoI	CTYRAG	3 cut(s)	86, 359, 1580
Sse9I	AATT	3 cut(s)	124, 879, 1039
SseBI	AGGCCT	3 cut(s)	331, 365, 1126
SspMI	CTAG	2 cut(s)	908, 1289
SstI	GAGCTC	2 cut(s)	85, 153
StuI	AGGCCT	3 cut(s)	331, 365, 1126
StyD4I	CCNGG	1 cut(s)	1543
StyI	CCWWGG	3 cut(s)	105, 115, 1066
TaaI	ACNGT	3 cut(s)	38, 48, 1526
TaiI	ACGT	1 cut(s)	1402
TaqI	TCGA	4 cut(s)	128, 210, 326, 606
TasI	AATT	3 cut(s)	124, 879, 1039
TatI	WGTACW	2 cut(s)	1221, 1450
TauI	GCSGC	3 cut(s)	593, 601, 1414
TfiI	GAWTC	1 cut(s)	403
Tru1I	TTAA	4 cut(s)	387, 621, 1089, 1627
Tru9I	TTAA	4 cut(s)	387, 621, 1089, 1627
TscAI	CASTG	2 cut(s)	1050, 1531
TseFI	GTSAC	2 cut(s)	724, 829
TseI	GCWGC	2 cut(s)	759, 978
Tsp45I	GTSAC	2 cut(s)	724, 829
TspDTI	ATGAA	8 cut(s)	226, 395, 461, 624, 840, 1023, 1308, 1364
TspRI	CASTG	2 cut(s)	1050, 1531
Van91I	CCANNNNNTGG	1 cut(s)	1344
XagI	CCTNNNNNAGG	1 cut(s)	448
XapI	RAATTY	1 cut(s)	1039
XbaI	TCTAGA	1 cut(s)	907
XcmI	CCANNNNNNNNNTGG	1 cut(s)	532
XmnI	GAANNNNTTC	1 cut(s)	1002
XspI	CTAG	2 cut(s)	908, 1289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.