ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g24140 |
| rosa_multiflora | Rmu_sc0002709.1_g000030 |
| rosa_samantha | Rh3AG330800 Rh3BG366800 Rh4DG307100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 25 |
| AciI | CCGC | 1 cut(s) | 54 |
| AcsI | RAATTY | 2 cut(s) | 273, 347 |
| AfaI | GTAC | 3 cut(s) | 107, 128, 162 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 119 |
| AflIII | ACRYGT | 1 cut(s) | 197 |
| AgsI | TTSAA | 3 cut(s) | 146, 278, 313 |
| AjnI | CCWGG | 2 cut(s) | 202, 252 |
| AluBI | AGCT | 3 cut(s) | 119, 167, 188 |
| AluI | AGCT | 3 cut(s) | 119, 167, 188 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 269 |
| Aor13HI | TCCGGA | 1 cut(s) | 25 |
| ApoI | RAATTY | 2 cut(s) | 273, 347 |
| AspS9I | GGNCC | 1 cut(s) | 322 |
| AsuHPI | GGTGA | 1 cut(s) | 30 |
| AvaII | GGWCC | 1 cut(s) | 322 |
| BbvCI | CCTCAGC | 1 cut(s) | 115 |
| BccI | CCATC | 3 cut(s) | 16, 23, 222 |
| BceAI | ACGGC | 1 cut(s) | 116 |
| BciT130I | CCWGG | 2 cut(s) | 204, 254 |
| Bme1390I | CCNGG | 2 cut(s) | 204, 254 |
| Bme18I | GGWCC | 1 cut(s) | 322 |
| BmgT120I | GGNCC | 1 cut(s) | 322 |
| BmrFI | CCNGG | 2 cut(s) | 204, 254 |
| BmsI | GCATC | 2 cut(s) | 13, 247 |
| Bpu10I | CCTNAGC | 1 cut(s) | 115 |
| BsaJI | CCNNGG | 1 cut(s) | 203 |
| BsaWI | WCCGGW | 1 cut(s) | 25 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 119 |
| BseAI | TCCGGA | 1 cut(s) | 25 |
| BseBI | CCWGG | 2 cut(s) | 204, 254 |
| BseDI | CCNNGG | 1 cut(s) | 203 |
| BseGI | GGATG | 5 cut(s) | 4, 8, 34, 262, 339 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 119 |
| BseMII | CTCAG | 1 cut(s) | 129 |
| BseRI | GAGGAG | 1 cut(s) | 260 |
| BsiSI | CCGG | 1 cut(s) | 26 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 119 |
| Bsp13I | TCCGGA | 1 cut(s) | 25 |
| Bsp143I | GATC | 1 cut(s) | 176 |
| BspACI | CCGC | 1 cut(s) | 54 |
| BspCNI | CTCAG | 1 cut(s) | 128 |
| BspEI | TCCGGA | 1 cut(s) | 25 |
| BssECI | CCNNGG | 1 cut(s) | 203 |
| BssMI | GATC | 1 cut(s) | 176 |
| Bst2UI | CCWGG | 2 cut(s) | 204, 254 |
| Bst4CI | ACNGT | 1 cut(s) | 265 |
| BstC8I | GCNNGC | 1 cut(s) | 121 |
| BstDEI | CTNAG | 1 cut(s) | 115 |
| BstF5I | GGATG | 5 cut(s) | 4, 8, 34, 262, 339 |
| BstKTI | GATC | 1 cut(s) | 179 |
| BstMBI | GATC | 1 cut(s) | 176 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 51 |
| BstNI | CCWGG | 2 cut(s) | 204, 254 |
| BstNSI | RCATGY | 2 cut(s) | 127, 201 |
| BstSCI | CCNGG | 2 cut(s) | 202, 252 |
| BtgZI | GCGATG | 1 cut(s) | 217 |
| BtsCI | GGATG | 5 cut(s) | 4, 8, 34, 262, 339 |
| Cac8I | GCNNGC | 1 cut(s) | 121 |
| CaiI | CAGNNNCTG | 1 cut(s) | 269 |
| Cfr13I | GGNCC | 1 cut(s) | 322 |
| Csp6I | GTAC | 3 cut(s) | 106, 127, 161 |
| CviAII | CATG | 3 cut(s) | 124, 198, 242 |
| CviJI | RGCY | 3 cut(s) | 119, 167, 188 |
| CviKI_1 | RGCY | 3 cut(s) | 119, 167, 188 |
| CviQI | GTAC | 3 cut(s) | 106, 127, 161 |
| DdeI | CTNAG | 1 cut(s) | 115 |
| DpnI | GATC | 1 cut(s) | 178 |
| DpnII | GATC | 1 cut(s) | 176 |
| Eco47I | GGWCC | 1 cut(s) | 322 |
| EcoRII | CCWGG | 2 cut(s) | 202, 252 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 3 cut(s) | 127, 201, 245 |
| FaiI | YATR | 8 cut(s) | 51, 72, 90, 125, 199, 223, 229, 243 |
| FatI | CATG | 3 cut(s) | 123, 197, 241 |
| FauI | CCCGC | 1 cut(s) | 47 |
| FokI | GGATG | 3 cut(s) | 41, 269, 326 |
| HapII | CCGG | 1 cut(s) | 26 |
| Hin1II | CATG | 3 cut(s) | 127, 201, 245 |
| HinfI | GANTC | 2 cut(s) | 80, 362 |
| HpaII | CCGG | 1 cut(s) | 26 |
| HphI | GGTGA | 1 cut(s) | 30 |
| Hpy188III | TCNNGA | 4 cut(s) | 26, 180, 269, 359 |
| HpyAV | CCTTC | 2 cut(s) | 186, 378 |
| HpyCH4III | ACNGT | 1 cut(s) | 265 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 260 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 51 |
| HpyF3I | CTNAG | 1 cut(s) | 115 |
| Hsp92II | CATG | 3 cut(s) | 127, 201, 245 |
| Kpn2I | TCCGGA | 1 cut(s) | 25 |
| Kzo9I | GATC | 1 cut(s) | 176 |
| LweI | GCATC | 2 cut(s) | 13, 247 |
| MaeIII | GTNAC | 1 cut(s) | 73 |
| MalI | GATC | 1 cut(s) | 178 |
| MboI | GATC | 1 cut(s) | 176 |
| MboII | GAAGA | 1 cut(s) | 276 |
| MluCI | AATT | 3 cut(s) | 147, 273, 347 |
| MnlI | CCTC | 6 cut(s) | 124, 143, 151, 238, 335, 353 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroI | TCCGGA | 1 cut(s) | 25 |
| MspA1I | CMGCKG | 1 cut(s) | 119 |
| MspI | CCGG | 1 cut(s) | 26 |
| MspR9I | CCNGG | 2 cut(s) | 204, 254 |
| MvaI | CCWGG | 2 cut(s) | 204, 254 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 51 |
| NdeII | GATC | 1 cut(s) | 176 |
| NlaIII | CATG | 3 cut(s) | 127, 201, 245 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 2 cut(s) | 127, 201 |
| PciI | ACATGT | 1 cut(s) | 197 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 181 |
| PfeI | GAWTC | 2 cut(s) | 80, 362 |
| PfoI | TCCNGGA | 1 cut(s) | 252 |
| PscI | ACATGT | 1 cut(s) | 197 |
| Psp6I | CCWGG | 2 cut(s) | 202, 252 |
| PspGI | CCWGG | 2 cut(s) | 202, 252 |
| PspPI | GGNCC | 1 cut(s) | 322 |
| PstNI | CAGNNNCTG | 1 cut(s) | 269 |
| PvuII | CAGCTG | 1 cut(s) | 119 |
| RsaI | GTAC | 3 cut(s) | 107, 128, 162 |
| RsaNI | GTAC | 3 cut(s) | 106, 127, 161 |
| Sau3AI | GATC | 1 cut(s) | 176 |
| Sau96I | GGNCC | 1 cut(s) | 322 |
| ScrFI | CCNGG | 2 cut(s) | 204, 254 |
| SetI | ASST | 6 cut(s) | 43, 121, 162, 169, 190, 327 |
| SfaNI | GCATC | 2 cut(s) | 13, 247 |
| SinI | GGWCC | 1 cut(s) | 322 |
| Sse9I | AATT | 3 cut(s) | 147, 273, 347 |
| SsiI | CCGC | 1 cut(s) | 54 |
| StyD4I | CCNGG | 2 cut(s) | 202, 252 |
| TaaI | ACNGT | 1 cut(s) | 265 |
| TaqI | TCGA | 1 cut(s) | 351 |
| TasI | AATT | 3 cut(s) | 147, 273, 347 |
| TatI | WGTACW | 2 cut(s) | 105, 126 |
| TfiI | GAWTC | 2 cut(s) | 80, 362 |
| VpaK11BI | GGWCC | 1 cut(s) | 322 |
| XapI | RAATTY | 2 cut(s) | 273, 347 |
| XceI | RCATGY | 2 cut(s) | 127, 201 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |