Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0021065

Physical Location & Seq

Genomic Coordinates Forward (+)

52924285 .. 52929919

Gene Structure 5635 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG307100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGTTTGTTTATGCATTTTGGGGTTTTAGGGACATATTGCTGGGACTGATGAAACGATTGGTGAAGAGGCGTGCTTCGAATTTGAAGGTTCTTATTACTTCGGCGACTCTTGATGGTGATAAAGTATCACAGTTCTTTTCGAATTGCCCGGTGCTGAATGTTCCGGGGAAGCTATACCCTGTGGAGATATTGTACAGCAATGAGCGTCCTAAGAGCTATCTTGAGTCGTCTTTGAAAACAGCTCTCGATATACATATTAAGGAACCTGAAGGAGATGTCTTGATATTCATGACTGGGCAGGATGACATAGAGAAGTTGGTCTCTAAGTTAGAAGATAGAGTTAGAAGCCTGGAAGAAGGATCTGTCTTGGATGCCATAATCCTTCCTCTTCACGGTTCTCTGCAGCCTGAAATGCAGGTACGTGTATTTAGTCCCCCACCTCCTAATTGTAGGAGATTTATTGTTGCCACAAACATTGCTGAAACTTCTTTGACTGTTGATGGTGTTGTGTATGTTATTGATTCTGGTTATGTGAAGCAACGGCAGTACAACCCCTCAACTGGCATGTACTCCCTCGAAGTTGTTCAAATTAGCAAGGTACAAGCTAATCAACGAGCAGGACGAGCTGGAAGGACACGTCCTGGGAAATGCTATCGGTTATATCCTTCCGTTGCTTACCATGAGGAGCTGCTGGATGCAACAATTCCTGAAATTCAACGTTCTTCACTTGCTGGAAGTGTTCTTTATTTGAAATCCTTGGACCTCCCTGATATTGACATTCTCACATTCGATTTTCTTGATTCTCCTTCCTCTGAATCTTTACAAGATGCTCTGAAGCAGTTGTATCTTATTGATGCTATTGATGAAAATGGATTGATCACAAGAGTTGGGAAAACAATGGCTGAACTTCCACTAGAACCTTCACTGTCAAGAACCTTAATGGAGGCAAATGAGTGTGGTTGCTTGTCCCAGGCTTTGACAGTTGCTGCTATGTTATCTGCAGAAACTACATTGCTTCCTGGTCGAAGCAAGAGTACTGAGAAGAAAAGGAAACATGATCATTTGGACCTTCCTGATGGTTCTGGTTGGGGTGATCACATCCAGTTGCTACAGATCTATGAGTGCTGGCATCAAACTCACTATGACATTGATTGGTGCAAGGACCGTGGCTTGCAGGTAAGAGGGATGACGTTTGTCAAGGATGTAAGGAAACAGCTATGTCAAATAATGCAAAAAATAGCAAAGGGATCATTAGATGTACAGACAAGCAGAAGAGGGAAACAAACCCAACAGGATTATAATAACTTGAGGAAGGCTTTATGTGTGGGGTATGCAAATCAGCTTGCTGAGAGAATGGTATTTCACAATGGCTATCGAACTTTAGGTTTTAAGCCCCAAGTAGTACAGGTGCATCCATCCTCTGTGCTAAAACCAGATGATGAAGGGAAATTTCCAAATTATGTCGTGTACCAGGAACTTATTGCCACTTCTCGTCCATACTTGCGCACTGTATGTGCTGTAAATGTTGCATGGGTTACACCCATTTTGAACAAGGTTAATAAACTAAACATCAACAAGCTGAGCGGTGGGAGTGGTCATATTGAAGAGCATGCAGAGGGAAATATTTCTGATTTGCCAAAGAAAGATGCTGTTACAGCAGTTCCTGATGATCAAGAAAGTAAAATACAAGCAGCCAGAGAACGATTTCTTGCTCGTAAAGGAAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

AAA_22 DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

576

Amino Acids

64.67

Weight (kDa)

8.48

Isoelectric Point (pI)

47.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Helicase_C	PF00271	83 - 212	8.5e-12	Helicase conserved C-terminal domain
WHD_HA2	PF04408	277 - 305	2.8e-08	Helicase associated domain (HA2), winged-helix
HA2_C	PF21010	306 - 369	5e-08	Helicase associated domain (HA2), ratchet-like
OB_NTP_bind	PF07717	436 - 516	1.9e-18	Oligonucleotide/oligosaccharide-binding (OB)-fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0021065)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g24140
rosa_multiflora	Rmu_sc0002709.1_g000030
rosa_samantha	Rh3AG330800 Rh3BG366800 Rh4DG307100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1299
Acc16I	TGCGCA	1 cut(s)	1505
Acc36I	ACCTGC	2 cut(s)	406, 1165
AccBSI	CCGCTC	1 cut(s)	1584
AciI	CCGC	1 cut(s)	1584
AclI	AACGTT	1 cut(s)	718
AclWI	GGATC	2 cut(s)	367, 1255
AcsI	RAATTY	3 cut(s)	79, 711, 1448
AcuI	CTGAAG	2 cut(s)	288, 854
AfaI	GTAC	9 cut(s)	194, 420, 548, 569, 600, 1036, 1260, 1404, 1469
AfiI	CCNNNNNNNGG	2 cut(s)	392, 560
AflIII	ACRYGT	2 cut(s)	421, 635
AgsI	TTSAA	7 cut(s)	85, 235, 587, 716, 751, 1549, 1604
AjiI	CACGTC	1 cut(s)	638
AjnI	CCWGG	5 cut(s)	348, 640, 969, 1018, 1470
AluBI	AGCT	9 cut(s)	172, 216, 242, 605, 626, 688, 1216, 1342, 1579
AluI	AGCT	9 cut(s)	172, 216, 242, 605, 626, 688, 1216, 1342, 1579
Alw26I	GTCTC	1 cut(s)	325
AlwI	GGATC	2 cut(s)	367, 1255
AlwNI	CAGNNNCTG	2 cut(s)	986, 1664
ApeKI	GCWGC	4 cut(s)	403, 688, 986, 1691
ApoI	RAATTY	3 cut(s)	79, 711, 1448
Asp700I	GAANNNNTTC	3 cut(s)	582, 1624, 1704
AspLEI	GCGC	1 cut(s)	1506
AspS9I	GGNCC	3 cut(s)	760, 1066, 1162
AsuC2I	CCSGG	2 cut(s)	149, 165
AsuHPI	GGTGA	3 cut(s)	73, 128, 1103
AsuII	TTCGAA	2 cut(s)	77, 140
AvaII	GGWCC	3 cut(s)	760, 1066, 1162
BarI	GAAGNNNNNNTAC	2 cut(s)	1018, 1050
BbvI	GCAGC	4 cut(s)	415, 675, 973, 1703
BccI	CCATC	4 cut(s)	107, 494, 1070, 1423
BceAI	ACGGC	1 cut(s)	557
BciT130I	CCWGG	5 cut(s)	350, 642, 971, 1020, 1472
BclI	TGATCA	4 cut(s)	876, 1057, 1093, 1669
BcnI	CCSGG	2 cut(s)	149, 165
BcoDI	GTCTC	1 cut(s)	325
BfaI	CTAG	1 cut(s)	914
BfmI	CTRYAG	3 cut(s)	401, 999, 1109
BfuAI	ACCTGC	2 cut(s)	406, 1165
BglII	AGATCT	1 cut(s)	1113
BisI	GCNGC	4 cut(s)	404, 689, 987, 1692
BlpI	GCTNAGC	1 cut(s)	1580
BlsI	GCNGC	4 cut(s)	405, 690, 988, 1693
BmcAI	AGTACT	1 cut(s)	1036
Bme1390I	CCNGG	7 cut(s)	149, 165, 350, 642, 971, 1020, 1472
Bme18I	GGWCC	3 cut(s)	760, 1066, 1162
BmgBI	CACGTC	1 cut(s)	638
BmgT120I	GGNCC	3 cut(s)	760, 1066, 1162
BmiI	GGNNCC	1 cut(s)	264
BmrFI	CCNGG	7 cut(s)	149, 165, 350, 642, 971, 1020, 1472
BmrI	ACTGGG	1 cut(s)	303
BmsI	GCATC	7 cut(s)	361, 685, 817, 844, 1138, 1420, 1636
BmuI	ACTGGG	1 cut(s)	303
BoxI	GACNNNNGTC	1 cut(s)	1193
Bpu1102I	GCTNAGC	1 cut(s)	1580
Bpu14I	TTCGAA	2 cut(s)	77, 140
BpuEI	CTTGAG	2 cut(s)	242, 1327
BpuMI	CCSGG	2 cut(s)	149, 165
BsaAI	YACGTR	1 cut(s)	422
BsaI	GGTCTC	1 cut(s)	325
BsaJI	CCNNGG	5 cut(s)	164, 641, 756, 969, 1165
BsaXI	ACNNNNNCTCC	2 cut(s)	176, 206
Bsc4I	CCNNNNNNNGG	2 cut(s)	392, 560
Bse1I	ACTGG	3 cut(s)	298, 565, 1102
Bse3DI	GCAATG	3 cut(s)	205, 474, 1010
BseBI	CCWGG	5 cut(s)	350, 642, 971, 1020, 1472
BseDI	CCNNGG	5 cut(s)	164, 641, 756, 969, 1165
BseGI	GGATG	8 cut(s)	307, 376, 700, 1098, 1191, 1207, 1411, 1415
BseLI	CCNNNNNNNGG	2 cut(s)	392, 560
BseMI	GCAATG	3 cut(s)	205, 474, 1010
BseMII	CTCAG	3 cut(s)	1029, 1338, 1571
BseNI	ACTGG	3 cut(s)	298, 565, 1102
BseRI	GAGGAG	1 cut(s)	698
BseXI	GCAGC	4 cut(s)	415, 675, 973, 1703
BseYI	CCCAGC	1 cut(s)	40
BsiSI	CCGG	2 cut(s)	149, 164
BslFI	GGGAC	4 cut(s)	44, 57, 417, 952
BslI	CCNNNNNNNGG	2 cut(s)	392, 560
BsmAI	GTCTC	1 cut(s)	325
BsmFI	GGGAC	4 cut(s)	44, 57, 417, 952
Bso31I	GGTCTC	1 cut(s)	325
Bsp119I	TTCGAA	2 cut(s)	77, 140
Bsp1407I	TGTACA	2 cut(s)	192, 1258
Bsp143I	GATC	7 cut(s)	359, 876, 1057, 1093, 1113, 1247, 1669
Bsp1720I	GCTNAGC	1 cut(s)	1580
BspACI	CCGC	1 cut(s)	1584
BspCNI	CTCAG	3 cut(s)	1030, 1339, 1572
BspHI	TCATGA	1 cut(s)	288
BspLI	GGNNCC	1 cut(s)	264
BspMAI	CTGCAG	2 cut(s)	405, 1003
BspMI	ACCTGC	2 cut(s)	406, 1165
BspPI	GGATC	2 cut(s)	367, 1255
BspQI	GCTCTTC	1 cut(s)	1599
BspT104I	TTCGAA	2 cut(s)	77, 140
BspTNI	GGTCTC	1 cut(s)	325
BsrBI	CCGCTC	1 cut(s)	1584
BsrDI	GCAATG	3 cut(s)	205, 474, 1010
BsrGI	TGTACA	2 cut(s)	192, 1258
BsrI	ACTGG	3 cut(s)	298, 565, 1102
BssECI	CCNNGG	5 cut(s)	164, 641, 756, 969, 1165
BssMI	GATC	7 cut(s)	359, 876, 1057, 1093, 1113, 1247, 1669
BssT1I	CCWWGG	1 cut(s)	756
Bst2UI	CCWGG	5 cut(s)	350, 642, 971, 1020, 1472
Bst4CI	ACNGT	7 cut(s)	132, 395, 496, 927, 982, 1166, 1510
Bst6I	CTCTTC	4 cut(s)	59, 393, 1267, 1599
BstAUI	TGTACA	2 cut(s)	192, 1258
BstBAI	YACGTR	1 cut(s)	422
BstBI	TTCGAA	2 cut(s)	77, 140
BstC8I	GCNNGC	5 cut(s)	72, 1127, 1172, 1344, 1611
BstDEI	CTNAG	5 cut(s)	210, 324, 1038, 1347, 1580
BstDSI	CCRYGG	1 cut(s)	1165
BstF5I	GGATG	8 cut(s)	307, 376, 700, 1098, 1191, 1207, 1411, 1415
BstHHI	GCGC	1 cut(s)	1506
BstKTI	GATC	7 cut(s)	362, 879, 1060, 1096, 1116, 1250, 1672
BstMAI	GTCTC	1 cut(s)	325
BstMBI	GATC	7 cut(s)	359, 876, 1057, 1093, 1113, 1247, 1669
BstMWI	GCNNNNNNNGC	3 cut(s)	412, 623, 1655
BstNI	CCWGG	5 cut(s)	350, 642, 971, 1020, 1472
BstNSI	RCATGY	2 cut(s)	568, 1613
BstPAI	GACNNNNGTC	1 cut(s)	1193
BstSCI	CCNGG	7 cut(s)	147, 163, 348, 640, 969, 1018, 1470
BstSFI	CTRYAG	3 cut(s)	401, 999, 1109
BstV1I	GCAGC	4 cut(s)	415, 675, 973, 1703
BstX2I	RGATCY	2 cut(s)	359, 1113
BstYI	RGATCY	2 cut(s)	359, 1113
BtgI	CCRYGG	1 cut(s)	1165
BtrI	CACGTC	1 cut(s)	638
BtsCI	GGATG	8 cut(s)	307, 376, 700, 1098, 1191, 1207, 1411, 1415
BtsIMutI	CAGTG	2 cut(s)	923, 1506
BveI	ACCTGC	2 cut(s)	406, 1165
Cac8I	GCNNGC	5 cut(s)	72, 1127, 1172, 1344, 1611
CaiI	CAGNNNCTG	2 cut(s)	986, 1664
CciI	TCATGA	1 cut(s)	288
CfoI	GCGC	1 cut(s)	1506
Cfr13I	GGNCC	3 cut(s)	760, 1066, 1162
CseI	GACGC	1 cut(s)	194
Csp6I	GTAC	9 cut(s)	193, 419, 547, 568, 599, 1035, 1259, 1403, 1468
CspCI	CAANNNNNGTGG	4 cut(s)	457, 492, 1147, 1182
CviAII	CATG	6 cut(s)	289, 565, 680, 1055, 1530, 1610
CviQI	GTAC	9 cut(s)	193, 419, 547, 568, 599, 1035, 1259, 1403, 1468
DdeI	CTNAG	5 cut(s)	210, 324, 1038, 1347, 1580
DpnI	GATC	7 cut(s)	361, 878, 1059, 1095, 1115, 1249, 1671
DpnII	GATC	7 cut(s)	359, 876, 1057, 1093, 1113, 1247, 1669
Eam1104I	CTCTTC	4 cut(s)	59, 393, 1267, 1599
EarI	CTCTTC	4 cut(s)	59, 393, 1267, 1599
Eco130I	CCWWGG	1 cut(s)	756
Eco31I	GGTCTC	1 cut(s)	325
Eco47I	GGWCC	3 cut(s)	760, 1066, 1162
Eco57I	CTGAAG	2 cut(s)	288, 854
EcoRII	CCWGG	5 cut(s)	348, 640, 969, 1018, 1470
EcoT14I	CCWWGG	1 cut(s)	756
EcoT22I	ATGCAT	1 cut(s)	16
ErhI	CCWWGG	1 cut(s)	756
FaeI	CATG	6 cut(s)	292, 568, 683, 1058, 1533, 1613
FaqI	GGGAC	4 cut(s)	44, 57, 417, 952
FatI	CATG	6 cut(s)	288, 564, 679, 1054, 1529, 1609
FbaI	TGATCA	4 cut(s)	876, 1057, 1093, 1669
Fnu4HI	GCNGC	4 cut(s)	404, 689, 987, 1692
FokI	GGATG	8 cut(s)	314, 383, 707, 1085, 1198, 1214, 1398, 1402
Fsp4HI	GCNGC	4 cut(s)	404, 689, 987, 1692
FspBI	CTAG	1 cut(s)	914
FspI	TGCGCA	1 cut(s)	1505
GlaI	GCGC	1 cut(s)	1505
GluI	GCNGC	4 cut(s)	404, 689, 987, 1692
GsaI	CCCAGC	1 cut(s)	44
HapII	CCGG	2 cut(s)	149, 164
HgaI	GACGC	1 cut(s)	194
HhaI	GCGC	1 cut(s)	1506
Hin1II	CATG	6 cut(s)	292, 568, 683, 1058, 1533, 1613
Hin6I	GCGC	1 cut(s)	1504
HinP1I	GCGC	1 cut(s)	1504
HinfI	GANTC	5 cut(s)	106, 224, 521, 800, 815
HpaII	CCGG	2 cut(s)	149, 164
HphI	GGTGA	3 cut(s)	73, 128, 1103
Hpy166II	GTNNAC	1 cut(s)	1468
Hpy188I	TCNGA	3 cut(s)	814, 834, 1630
Hpy8I	GTNNAC	1 cut(s)	1468
HpyCH4III	ACNGT	7 cut(s)	132, 395, 496, 927, 982, 1166, 1510
HpyCH4IV	ACGT	4 cut(s)	421, 637, 718, 1190
HpyF10VI	GCNNNNNNNGC	3 cut(s)	412, 623, 1655
HpyF3I	CTNAG	5 cut(s)	210, 324, 1038, 1347, 1580
HpySE526I	ACGT	4 cut(s)	421, 637, 718, 1190
Hsp92II	CATG	6 cut(s)	292, 568, 683, 1058, 1533, 1613
HspAI	GCGC	1 cut(s)	1504
Ksp22I	TGATCA	4 cut(s)	876, 1057, 1093, 1669
Kzo9I	GATC	7 cut(s)	359, 876, 1057, 1093, 1113, 1247, 1669
LguI	GCTCTTC	1 cut(s)	1599
LmnI	GCTCC	1 cut(s)	685
Lsp1109I	GCAGC	4 cut(s)	415, 675, 973, 1703
LweI	GCATC	7 cut(s)	361, 685, 817, 844, 1138, 1420, 1636
MaeI	CTAG	1 cut(s)	914
MaeII	ACGT	4 cut(s)	421, 637, 718, 1190
MaeIII	GTNAC	2 cut(s)	1534, 1651
MalI	GATC	7 cut(s)	361, 878, 1059, 1095, 1115, 1249, 1671
MbiI	CCGCTC	1 cut(s)	1584
MboI	GATC	7 cut(s)	359, 876, 1057, 1093, 1113, 1247, 1669
MboII	GAAGA	8 cut(s)	76, 344, 365, 380, 714, 1054, 1284, 1616
MflI	RGATCY	2 cut(s)	359, 1113
MluCI	AATT	8 cut(s)	79, 142, 445, 588, 702, 711, 1448, 1456
MlyI	GAGTC	2 cut(s)	100, 233
Mph1103I	ATGCAT	1 cut(s)	16
MroXI	GAANNNNTTC	3 cut(s)	582, 1624, 1704
MseI	TTAA	4 cut(s)	258, 938, 1389, 1557
MspI	CCGG	2 cut(s)	149, 164
MspR9I	CCNGG	7 cut(s)	149, 165, 350, 642, 971, 1020, 1472
MvaI	CCWGG	5 cut(s)	350, 642, 971, 1020, 1472
MwoI	GCNNNNNNNGC	3 cut(s)	412, 623, 1655
NciI	CCSGG	2 cut(s)	149, 165
NdeII	GATC	7 cut(s)	359, 876, 1057, 1093, 1113, 1247, 1669
NlaIII	CATG	6 cut(s)	292, 568, 683, 1058, 1533, 1613
NlaIV	GGNNCC	1 cut(s)	264
NsbI	TGCGCA	1 cut(s)	1505
NsiI	ATGCAT	1 cut(s)	16
NspI	RCATGY	2 cut(s)	568, 1613
NspV	TTCGAA	2 cut(s)	77, 140
PaeI	GCATGC	1 cut(s)	1613
PagI	TCATGA	1 cut(s)	288
PciSI	GCTCTTC	1 cut(s)	1599
PcsI	WCGNNNNNNNCGW	1 cut(s)	619
PdmI	GAANNNNTTC	3 cut(s)	582, 1624, 1704
PfeI	GAWTC	3 cut(s)	521, 800, 815
PkrI	GCNGC	4 cut(s)	405, 690, 988, 1693
PleI	GAGTC	2 cut(s)	100, 232
PpsI	GAGTC	2 cut(s)	100, 232
Ppu21I	YACGTR	1 cut(s)	422
PshAI	GACNNNNGTC	1 cut(s)	1193
PsiI	TTATAA	1 cut(s)	1299
Psp1406I	AACGTT	1 cut(s)	718
Psp6I	CCWGG	5 cut(s)	348, 640, 969, 1018, 1470
PspFI	CCCAGC	1 cut(s)	40
PspGI	CCWGG	5 cut(s)	348, 640, 969, 1018, 1470
PspN4I	GGNNCC	1 cut(s)	264
PspPI	GGNCC	3 cut(s)	760, 1066, 1162
PstI	CTGCAG	2 cut(s)	405, 1003
PstNI	CAGNNNCTG	2 cut(s)	986, 1664
PsuI	RGATCY	2 cut(s)	359, 1113
RsaI	GTAC	9 cut(s)	194, 420, 548, 569, 600, 1036, 1260, 1404, 1469
RsaNI	GTAC	9 cut(s)	193, 419, 547, 568, 599, 1035, 1259, 1403, 1468
SapI	GCTCTTC	1 cut(s)	1599
SaqAI	TTAA	4 cut(s)	258, 938, 1389, 1557
SatI	GCNGC	4 cut(s)	404, 689, 987, 1692
Sau3AI	GATC	7 cut(s)	359, 876, 1057, 1093, 1113, 1247, 1669
Sau96I	GGNCC	3 cut(s)	760, 1066, 1162
ScaI	AGTACT	1 cut(s)	1036
SchI	GAGTC	2 cut(s)	100, 233
ScrFI	CCNGG	7 cut(s)	149, 165, 350, 642, 971, 1020, 1472
SfaNI	GCATC	7 cut(s)	361, 685, 817, 844, 1138, 1420, 1636
SfcI	CTRYAG	3 cut(s)	401, 999, 1109
SfuI	TTCGAA	2 cut(s)	77, 140
SinI	GGWCC	3 cut(s)	760, 1066, 1162
SmlI	CTYRAG	2 cut(s)	221, 1306
SmoI	CTYRAG	2 cut(s)	221, 1306
SphI	GCATGC	1 cut(s)	1613
Sse9I	AATT	8 cut(s)	79, 142, 445, 588, 702, 711, 1448, 1456
SsiI	CCGC	1 cut(s)	1584
SspI	AATATT	1 cut(s)	1624
SspMI	CTAG	1 cut(s)	914
StyD4I	CCNGG	7 cut(s)	147, 163, 348, 640, 969, 1018, 1470
StyI	CCWWGG	1 cut(s)	756
TaaI	ACNGT	7 cut(s)	132, 395, 496, 927, 982, 1166, 1510
TaiI	ACGT	4 cut(s)	424, 640, 721, 1193
TaqI	TCGA	7 cut(s)	77, 140, 246, 576, 789, 1024, 1375
TasI	AATT	8 cut(s)	79, 142, 445, 588, 702, 711, 1448, 1456
TatI	WGTACW	6 cut(s)	192, 546, 567, 1034, 1258, 1402
TfiI	GAWTC	3 cut(s)	521, 800, 815
Tru1I	TTAA	4 cut(s)	258, 938, 1389, 1557
Tru9I	TTAA	4 cut(s)	258, 938, 1389, 1557
TscAI	CASTG	2 cut(s)	930, 1513
TseI	GCWGC	4 cut(s)	403, 688, 986, 1691
TspDTI	ATGAA	4 cut(s)	65, 277, 879, 1455
TspGWI	ACGGA	1 cut(s)	658
TspRI	CASTG	2 cut(s)	930, 1513
VpaK11BI	GGWCC	3 cut(s)	760, 1066, 1162
XapI	RAATTY	3 cut(s)	79, 711, 1448
XceI	RCATGY	2 cut(s)	568, 1613
XmnI	GAANNNNTTC	3 cut(s)	582, 1624, 1704
XspI	CTAG	1 cut(s)	914
ZrmI	AGTACT	1 cut(s)	1036
Zsp2I	ATGCAT	1 cut(s)	16

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.