Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0009454

Physical Location & Seq

Genomic Coordinates Forward (+)

12588818 .. 12594145

Gene Structure 5328 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG150800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGGAAGCCCTAGAATCTTCTGCGACTCCAGCAAAGTCCCTGAACCCTAATTTGACCTCCAAGGTCAGGGTCATCGTTAGGGTTCGGCCATTTCTTCCCCACGAAATCTCCGCCCTGAACGGCGATCACACTCCCTGCGCTTCCGTTCTTGACCTAGAATCTCAGTCGTCCACTGAAGAAGTCGTCGTTCATCTCAAAGATAAAGAATCAAGCCGAAAGGAGTGTTATCGGTTAGACTCGTTCTTTTCCGGGGAGGACAACAATGTAGCTCGGATTTTCTACAGGGAAGTGAGCCCTTTGATTCTGAGAATCTTCCAAGGCTTCAATTCCACTGTGTTTGCTTATGGAGCTACCGGTAGTGGAAAGACTTACACTATGCAGGGGACGGATGAGATGCCGGGTCTAATGCCACTGGCCATGTCCACGATCCTATCTATGTGCCAGTGCACCGGAGCCACAGCTGAGATTTCATACTATGAGGTCTATATGGACAGGTGTTATGATCTGTTAGAGGTCAAATCTCAGGAAATTGCTGTTTTGGATGACAAAGATGGTCGGATTCATCTTAGGGGGCTCTCTAGGGTGCCTATAAAGTCGATGCAAGAATTTGATGAGGCCTTGTCTTGTGGGATTCAGAGGCGGAAAACCGCGCATACGGGTCTTAATGATGTCTCTAGTAGGAGCCATGGGGTCCTTGTGATTTCTGTTTCCACTCCTTGTGATGGTGTTTCTGGGGCTGCTGTTACTGGGAAGTTGAACCTCATAGACTTGGCAGGCAACGAAGATAACAGAAGAACTTGCAATGAAGGGATTCGTCTCCAAGAGAGTGCAAAGATTAACCAGTCATTGTTTTCATTGTCAAATGTGATTTATGCATTAAACAACAATTTATCCCGAGTTCCCTACAGAGAGAGTAAATTGACTCGTATATTGCAAGACTCACTAGGTGGGATGAGCGAGGCTTTGATGATTGCTTGCTTGAATCCAGGAGAGTACCAGGAGTCAGTTCACACTGTCAGCTTGGCAGCTCGGTCACGTCACATCACCAATTCGGTTCCTTCGGCTCACAAGCAAGAGACACCAAAGGTTAAAGTAGACATGGAAGCCAAACTTCATGCTTGGCTTGAATCCAGAGGAAAGACAAAGAGTGCACAAAGAGTTCAACCATTGAATTCTCCTTTCTTGGGAAAACCTCCACTCTCCTCTACCAAGAAATTTAACACCAACCTCAGCTCACTGAAGAAGCTTACTACTAACCGACGTGATGGAAAGGAAAGGACAATCACTACAGCTGTCAGGAATTTATTTGATGAAGGCCCAGTTGATACTAATTTGGAGAGCCTGCTAAATGCTGCTAAGGATAAGGGTGATGCTGAAACCGGTGGATTTACAAGCTTACCTGGTGAGTCATCAAACCATGACGAGAAGTCTACAAGCTTTGTTAATTCATCACCTGTTGGTAAGAGGAAGAGCCCACTCAAAAGTCCTTTGAGGAAAGTTCTTTCCCCTGTCAATACAAATATAAACCCAAAACCCTTTGATGAACTGGTATCCATTGAGCCAAGGACACCCAAGACACCTTTTCCTGTAAATTGTATGAACAACAGATCCCAAAATCTGGGGACCCCACTAGAGAAATTCACTGCTTGTGGGTCTCAAGTAAAGAACTGCCTTGTTCAAGATTATGTTGACTTCTTAAACACAGCCAACAGGGAGGAGCTACTGGAAATCAAGGGAATCGGAGTCAAATATGCAGACTACATACTCGGACTGAGAGAAACAAGCCCTTTACAATCGCTGAGCGATTTGGAGAAAGTAGGGCTCTCTTCTAAGCAGGTGAACTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000278 GO:0000280 GO:0000785 GO:0000819 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007049 GO:0007059 GO:0007062 GO:0007080 GO:0008150 GO:0009507 GO:0009536 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0072686 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

ko04914 map04914

Pfam Domains

Protein Families

HHH_3 Kinesin

Protein Analysis

615

Amino Acids

67.65

Weight (kDa)

8.44

Isoelectric Point (pI)

49.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	18 - 170	2.1e-15	Microtubule binding
Kinesin	PF00225	27 - 348	2.5e-87	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02370
fragaria_vesca	FvH4_6g13700 FvH4_6g13700 FvH4_6g13700 FvH4_6g13700
malus_domestica	MD04G1129000.v1.1 MD12G1141700.v1.1
prunus_persica	Prupe.6G255200_v2.0.a1 Prupe.6G255200_v2.0.a1
pyrus_communis	pycom04g11720 pycom12g13640
rosa_chinensis	RchiOBHm_Chr3g0466571
rosa_laevigata	RLG00000024562
rosa_multiflora	Rmu_sc0020778.1_g000004
rosa_roxburghii	Rroxscaffold_6G00414340
rosa_rugosa	Rorug03G0082800 Rorug03G0082900
rosa_samantha	Rh3AG129700 Rh3BG151100 Rh3CG150800 Rh3DG151700
rosa_wichuraiana	Rw3G012260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1825
Acc36I	ACCTGC	1 cut(s)	1825
AccB1I	GGYRCC	1 cut(s)	583
AccB7I	CCANNNNNTGG	1 cut(s)	1618
AccI	GTMKAC	2 cut(s)	1095, 1430
AccII	CGCG	1 cut(s)	650
AciI	CCGC	3 cut(s)	111, 640, 648
AclWI	GGATC	2 cut(s)	421, 1602
AcoI	YGGCCR	2 cut(s)	86, 414
AcsI	RAATTY	5 cut(s)	605, 1171, 1214, 1300, 1637
AcuI	CTGAAG	2 cut(s)	195, 1259
AdeI	CACNNNGTG	1 cut(s)	947
AfaI	GTAC	1 cut(s)	995
AfiI	CCNNNNNNNGG	4 cut(s)	66, 722, 1184, 1618
AgeI	ACCGGT	2 cut(s)	353, 1379
AgsI	TTSAA	7 cut(s)	325, 757, 982, 1127, 1163, 1171, 1679
AhdI	GACNNNNNGTC	1 cut(s)	1426
AjiI	CACGTC	2 cut(s)	1037, 1262
AjnI	CCWGG	3 cut(s)	985, 996, 1399
AloI	GAACNNNNNNTCC	2 cut(s)	1592, 1624
Alw21I	GWGCWC	2 cut(s)	449, 1153
Alw26I	GTCTC	4 cut(s)	676, 821, 1070, 1659
Alw44I	GTGCAC	2 cut(s)	445, 1149
AlwI	GGATC	2 cut(s)	421, 1602
Ama87I	CYCGRG	1 cut(s)	894
AoxI	GGCC	4 cut(s)	86, 414, 615, 1315
ApaLI	GTGCAC	2 cut(s)	445, 1149
ApeKI	GCWGC	3 cut(s)	737, 1025, 1352
ApoI	RAATTY	5 cut(s)	605, 1171, 1214, 1300, 1637
AsiGI	ACCGGT	2 cut(s)	353, 1379
Asp700I	GAANNNNTTC	1 cut(s)	810
AspLEI	GCGC	2 cut(s)	140, 652
AspS9I	GGNCC	3 cut(s)	691, 1316, 1623
AsuC2I	CCSGG	2 cut(s)	250, 399
AsuHPI	GGTGA	4 cut(s)	1036, 1379, 1415, 1443
AvaI	CYCGRG	1 cut(s)	894
AvaII	GGWCC	2 cut(s)	691, 1623
BaeGI	GKGCMC	2 cut(s)	449, 1153
BalI	TGGCCA	1 cut(s)	416
BanI	GGYRCC	1 cut(s)	583
BanII	GRGCYC	4 cut(s)	296, 576, 1475, 1824
Bbv12I	GWGCWC	2 cut(s)	449, 1153
BbvCI	CCTCAGC	1 cut(s)	1229
BbvI	GCAGC	3 cut(s)	724, 1037, 1339
BccI	CCATC	3 cut(s)	545, 716, 1259
BceAI	ACGGC	1 cut(s)	136
BciT130I	CCWGG	3 cut(s)	987, 998, 1401
BciVI	GTATCC	1 cut(s)	1561
BcnI	CCSGG	2 cut(s)	250, 399
BcoDI	GTCTC	4 cut(s)	676, 821, 1070, 1659
BfaI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1631
BfmI	CTRYAG	3 cut(s)	280, 904, 1287
BfuAI	ACCTGC	1 cut(s)	1825
BfuI	GTATCC	1 cut(s)	1561
BisI	GCNGC	3 cut(s)	738, 1026, 1353
BlpI	GCTNAGC	1 cut(s)	1799
BlsI	GCNGC	3 cut(s)	739, 1027, 1354
Bme1390I	CCNGG	5 cut(s)	250, 399, 987, 998, 1401
Bme18I	GGWCC	2 cut(s)	691, 1623
BmeRI	GACNNNNNGTC	1 cut(s)	1426
BmeT110I	CYCGRG	1 cut(s)	894
BmgBI	CACGTC	2 cut(s)	1037, 1262
BmgT120I	GGNCC	3 cut(s)	691, 1316, 1623
BmiI	GGNNCC	7 cut(s)	454, 585, 683, 692, 1056, 1624, 1625
BmrFI	CCNGG	5 cut(s)	250, 399, 987, 998, 1401
BmrI	ACTGGG	2 cut(s)	756, 1313
BmsI	GCATC	3 cut(s)	384, 588, 1360
BmuI	ACTGGG	2 cut(s)	756, 1313
BpmI	CTGGAG	1 cut(s)	12
Bpu10I	CCTNAGC	2 cut(s)	1229, 1356
Bpu1102I	GCTNAGC	1 cut(s)	1799
BpuEI	CTTGAG	1 cut(s)	1641
BpuMI	CCSGG	2 cut(s)	250, 399
BsaI	GGTCTC	1 cut(s)	1659
BsaJI	CCNNGG	5 cut(s)	60, 249, 316, 685, 1562
BsaWI	WCCGGW	3 cut(s)	353, 449, 1379
BsaXI	ACNNNNNCTCC	2 cut(s)	92, 122
Bsc4I	CCNNNNNNNGG	4 cut(s)	66, 722, 1184, 1618
Bse118I	RCCGGY	2 cut(s)	353, 1379
Bse1I	ACTGG	7 cut(s)	417, 442, 751, 841, 1319, 1551, 1728
Bse3DI	GCAATG	1 cut(s)	808
BseBI	CCWGG	3 cut(s)	987, 998, 1401
BseDI	CCNNGG	5 cut(s)	60, 249, 316, 685, 1562
BseGI	GGATG	3 cut(s)	394, 547, 957
BseLI	CCNNNNNNNGG	4 cut(s)	66, 722, 1184, 1618
BseMI	GCAATG	1 cut(s)	808
BseMII	CTCAG	7 cut(s)	176, 296, 453, 536, 1243, 1763, 1790
BseNI	ACTGG	7 cut(s)	417, 442, 751, 841, 1319, 1551, 1728
BseRI	GAGGAG	2 cut(s)	1192, 1730
BseSI	GKGCMC	2 cut(s)	449, 1153
BseXI	GCAGC	3 cut(s)	724, 1037, 1339
Bsh1236I	CGCG	1 cut(s)	650
BshFI	GGCC	4 cut(s)	88, 416, 617, 1317
BshNI	GGYRCC	1 cut(s)	583
BshTI	ACCGGT	2 cut(s)	353, 1379
BsiHKAI	GWGCWC	2 cut(s)	449, 1153
BsiHKCI	CYCGRG	1 cut(s)	894
BsiSI	CCGG	5 cut(s)	249, 354, 398, 450, 1380
BslFI	GGGAC	3 cut(s)	22, 397, 1636
BslI	CCNNNNNNNGG	4 cut(s)	66, 722, 1184, 1618
BsmAI	GTCTC	4 cut(s)	676, 821, 1070, 1659
BsmBI	CGTCTC	1 cut(s)	821
BsmFI	GGGAC	3 cut(s)	22, 397, 1636
BsnI	GGCC	4 cut(s)	88, 416, 617, 1317
Bso31I	GGTCTC	1 cut(s)	1659
BsoBI	CYCGRG	1 cut(s)	894
Bsp1286I	GDGCHC	6 cut(s)	296, 449, 576, 1153, 1475, 1824
Bsp143I	GATC	4 cut(s)	124, 426, 502, 1607
Bsp1720I	GCTNAGC	1 cut(s)	1799
Bsp19I	CCATGG	1 cut(s)	685
BspACI	CCGC	3 cut(s)	111, 640, 648
BspANI	GGCC	4 cut(s)	88, 416, 617, 1317
BspCNI	CTCAG	7 cut(s)	175, 297, 454, 535, 1242, 1764, 1791
BspFNI	CGCG	1 cut(s)	650
BspLI	GGNNCC	7 cut(s)	454, 585, 683, 692, 1056, 1624, 1625
BspMI	ACCTGC	1 cut(s)	1825
BspPI	GGATC	2 cut(s)	421, 1602
BspQI	GCTCTTC	1 cut(s)	1463
BspT107I	GGYRCC	1 cut(s)	583
BspTNI	GGTCTC	1 cut(s)	1659
BsrDI	GCAATG	1 cut(s)	808
BsrFI	RCCGGY	2 cut(s)	353, 1379
BsrI	ACTGG	7 cut(s)	417, 442, 751, 841, 1319, 1551, 1728
BssAI	RCCGGY	2 cut(s)	353, 1379
BssECI	CCNNGG	5 cut(s)	60, 249, 316, 685, 1562
BssMI	GATC	4 cut(s)	124, 426, 502, 1607
BssT1I	CCWWGG	4 cut(s)	60, 316, 685, 1562
Bst2UI	CCWGG	3 cut(s)	987, 998, 1401
Bst4CI	ACNGT	2 cut(s)	334, 1015
Bst6I	CTCTTC	2 cut(s)	1463, 1831
BstC8I	GCNNGC	3 cut(s)	775, 976, 1343
BstDSI	CCRYGG	1 cut(s)	685
BstF5I	GGATG	3 cut(s)	394, 547, 957
BstFNI	CGCG	1 cut(s)	650
BstHHI	GCGC	2 cut(s)	140, 652
BstKTI	GATC	4 cut(s)	127, 429, 505, 1610
BstMAI	GTCTC	4 cut(s)	676, 821, 1070, 1659
BstMBI	GATC	4 cut(s)	124, 426, 502, 1607
BstMWI	GCNNNNNNNGC	2 cut(s)	29, 347
BstNI	CCWGG	3 cut(s)	987, 998, 1401
BstSCI	CCNGG	5 cut(s)	248, 397, 985, 996, 1399
BstSFI	CTRYAG	3 cut(s)	280, 904, 1287
BstSLI	GKGCMC	2 cut(s)	449, 1153
BstUI	CGCG	1 cut(s)	650
BstV1I	GCAGC	3 cut(s)	724, 1037, 1339
BstX2I	RGATCY	1 cut(s)	1607
BstYI	RGATCY	1 cut(s)	1607
BsuI	GTATCC	1 cut(s)	1561
BsuRI	GGCC	4 cut(s)	88, 416, 617, 1317
BtgI	CCRYGG	1 cut(s)	685
BtrI	CACGTC	2 cut(s)	1037, 1262
BtsCI	GGATG	3 cut(s)	394, 547, 957
BtsI	GCAGTG	1 cut(s)	1641
BtsIMutI	CAGTG	7 cut(s)	171, 330, 410, 449, 1011, 1235, 1641
BveI	ACCTGC	1 cut(s)	1825
Cac8I	GCNNGC	3 cut(s)	775, 976, 1343
CfoI	GCGC	2 cut(s)	140, 652
Cfr10I	RCCGGY	2 cut(s)	353, 1379
Cfr13I	GGNCC	3 cut(s)	691, 1316, 1623
CsiI	ACCWGGT	1 cut(s)	1399
Csp6I	GTAC	1 cut(s)	994
CspAI	ACCGGT	2 cut(s)	353, 1379
CspCI	CAANNNNNGTGG	2 cut(s)	319, 354
CviAII	CATG	5 cut(s)	418, 686, 1099, 1115, 1418
CviQI	GTAC	1 cut(s)	994
DpnI	GATC	4 cut(s)	126, 428, 504, 1609
DpnII	GATC	4 cut(s)	124, 426, 502, 1607
DraIII	CACNNNGTG	1 cut(s)	947
DriI	GACNNNNNGTC	1 cut(s)	1426
EaeI	YGGCCR	2 cut(s)	86, 414
Eam1104I	CTCTTC	2 cut(s)	1463, 1831
Eam1105I	GACNNNNNGTC	1 cut(s)	1426
EarI	CTCTTC	2 cut(s)	1463, 1831
EciI	GGCGGA	2 cut(s)	100, 655
Eco130I	CCWWGG	4 cut(s)	60, 316, 685, 1562
Eco147I	AGGCCT	1 cut(s)	617
Eco24I	GRGCYC	4 cut(s)	296, 576, 1475, 1824
Eco31I	GGTCTC	1 cut(s)	1659
Eco47I	GGWCC	2 cut(s)	691, 1623
Eco57I	CTGAAG	2 cut(s)	195, 1259
Eco88I	CYCGRG	1 cut(s)	894
EcoO109I	RGGNCCY	2 cut(s)	691, 1623
EcoRI	GAATTC	1 cut(s)	1171
EcoRII	CCWGG	3 cut(s)	985, 996, 1399
EcoT14I	CCWWGG	4 cut(s)	60, 316, 685, 1562
EcoT22I	ATGCAT	1 cut(s)	877
EcoT38I	GRGCYC	4 cut(s)	296, 576, 1475, 1824
ErhI	CCWWGG	4 cut(s)	60, 316, 685, 1562
Esp3I	CGTCTC	1 cut(s)	821
FaeI	CATG	5 cut(s)	421, 689, 1102, 1118, 1421
FalI	AAGNNNNNCTT	2 cut(s)	1095, 1127
FaqI	GGGAC	3 cut(s)	22, 397, 1636
FatI	CATG	5 cut(s)	417, 685, 1098, 1114, 1417
FblI	GTMKAC	2 cut(s)	1095, 1430
Fnu4HI	GCNGC	3 cut(s)	738, 1026, 1353
FokI	GGATG	3 cut(s)	401, 554, 964
FriOI	GRGCYC	4 cut(s)	296, 576, 1475, 1824
Fsp4HI	GCNGC	3 cut(s)	738, 1026, 1353
FspBI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1631
GlaI	GCGC	2 cut(s)	139, 651
GluI	GCNGC	3 cut(s)	738, 1026, 1353
GsuI	CTGGAG	1 cut(s)	12
HaeIII	GGCC	4 cut(s)	88, 416, 617, 1317
HapII	CCGG	5 cut(s)	249, 354, 398, 450, 1380
HhaI	GCGC	2 cut(s)	140, 652
Hin1II	CATG	5 cut(s)	421, 689, 1102, 1118, 1421
Hin6I	GCGC	2 cut(s)	138, 650
HinP1I	GCGC	2 cut(s)	138, 650
HincII	GTYRAC	1 cut(s)	1690
HindII	GTYRAC	1 cut(s)	1690
HindIII	AAGCTT	3 cut(s)	1244, 1393, 1435
HpaII	CCGG	5 cut(s)	249, 354, 398, 450, 1380
HphI	GGTGA	4 cut(s)	1036, 1379, 1415, 1443
Hpy166II	GTNNAC	9 cut(s)	171, 423, 447, 1009, 1096, 1151, 1431, 1690, 1840
Hpy188I	TCNGA	6 cut(s)	273, 306, 558, 636, 1742, 1769
Hpy188III	TCNNGA	6 cut(s)	149, 524, 894, 1131, 1297, 1679
Hpy8I	GTNNAC	9 cut(s)	171, 423, 447, 1009, 1096, 1151, 1431, 1690, 1840
Hpy99I	CGWCG	2 cut(s)	188, 1263
HpyAV	CCTTC	3 cut(s)	800, 1068, 1307
HpyCH4III	ACNGT	2 cut(s)	334, 1015
HpyCH4IV	ACGT	2 cut(s)	1036, 1261
HpyCH4V	TGCA	9 cut(s)	379, 447, 601, 801, 830, 875, 934, 1151, 1754
HpyF10VI	GCNNNNNNNGC	2 cut(s)	29, 347
HpySE526I	ACGT	2 cut(s)	1036, 1261
Hsp92II	CATG	5 cut(s)	421, 689, 1102, 1118, 1421
HspAI	GCGC	2 cut(s)	138, 650
KflI	GGGWCCC	1 cut(s)	1623
Kzo9I	GATC	4 cut(s)	124, 426, 502, 1607
LguI	GCTCTTC	1 cut(s)	1463
LmnI	GCTCC	4 cut(s)	347, 452, 681, 1717
Lsp1109I	GCAGC	3 cut(s)	724, 1037, 1339
LweI	GCATC	3 cut(s)	384, 588, 1360
MabI	ACCWGGT	1 cut(s)	1399
MaeI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1631
MaeII	ACGT	2 cut(s)	1036, 1261
MaeIII	GTNAC	3 cut(s)	742, 1032, 1037
MalI	GATC	4 cut(s)	126, 428, 504, 1609
MboI	GATC	4 cut(s)	124, 426, 502, 1607
MboII	GAAGA	9 cut(s)	9, 86, 188, 304, 794, 804, 1252, 1480, 1818
MflI	RGATCY	1 cut(s)	1607
MhlI	GDGCHC	6 cut(s)	296, 449, 576, 1153, 1475, 1824
MlsI	TGGCCA	1 cut(s)	416
MluNI	TGGCCA	1 cut(s)	416
MlyI	GAGTC	7 cut(s)	19, 230, 916, 932, 1010, 1415, 1752
MmeI	TCCRAC	1 cut(s)	536
Mox20I	TGGCCA	1 cut(s)	416
Mph1103I	ATGCAT	1 cut(s)	877
MroXI	GAANNNNTTC	1 cut(s)	810
MscI	TGGCCA	1 cut(s)	416
MseI	TTAA	8 cut(s)	663, 837, 878, 1089, 1218, 1443, 1697, 1846
Msp20I	TGGCCA	1 cut(s)	416
MspA1I	CMGCKG	2 cut(s)	461, 1292
MspI	CCGG	5 cut(s)	249, 354, 398, 450, 1380
MspR9I	CCNGG	5 cut(s)	250, 399, 987, 998, 1401
MvaI	CCWGG	3 cut(s)	987, 998, 1401
MvnI	CGCG	1 cut(s)	650
MwoI	GCNNNNNNNGC	2 cut(s)	29, 347
NciI	CCSGG	2 cut(s)	250, 399
NcoI	CCATGG	1 cut(s)	685
NdeII	GATC	4 cut(s)	124, 426, 502, 1607
NlaIII	CATG	5 cut(s)	421, 689, 1102, 1118, 1421
NlaIV	GGNNCC	7 cut(s)	454, 585, 683, 692, 1056, 1624, 1625
NmuCI	GTSAC	2 cut(s)	1032, 1037
NsiI	ATGCAT	1 cut(s)	877
PaqCI	CACCTGC	1 cut(s)	1825
PceI	AGGCCT	1 cut(s)	617
PciSI	GCTCTTC	1 cut(s)	1463
PdmI	GAANNNNTTC	1 cut(s)	810
PflMI	CCANNNNNTGG	1 cut(s)	1618
PfoI	TCCNGGA	1 cut(s)	985
PinAI	ACCGGT	2 cut(s)	353, 1379
PkrI	GCNGC	3 cut(s)	739, 1027, 1354
PleI	GAGTC	7 cut(s)	19, 230, 916, 932, 1009, 1414, 1751
PpsI	GAGTC	7 cut(s)	19, 230, 916, 932, 1009, 1414, 1751
PpuMI	RGGWCCY	2 cut(s)	691, 1623
Psp5II	RGGWCCY	2 cut(s)	691, 1623
Psp6I	CCWGG	3 cut(s)	985, 996, 1399
PspGI	CCWGG	3 cut(s)	985, 996, 1399
PspN4I	GGNNCC	7 cut(s)	454, 585, 683, 692, 1056, 1624, 1625
PspPI	GGNCC	3 cut(s)	691, 1316, 1623
PspPPI	RGGWCCY	2 cut(s)	691, 1623
PsuI	RGATCY	1 cut(s)	1607
PvuII	CAGCTG	2 cut(s)	461, 1292
RsaI	GTAC	1 cut(s)	995
RsaNI	GTAC	1 cut(s)	994
SapI	GCTCTTC	1 cut(s)	1463
SaqAI	TTAA	8 cut(s)	663, 837, 878, 1089, 1218, 1443, 1697, 1846
SatI	GCNGC	3 cut(s)	738, 1026, 1353
Sau3AI	GATC	4 cut(s)	124, 426, 502, 1607
Sau96I	GGNCC	3 cut(s)	691, 1316, 1623
SchI	GAGTC	7 cut(s)	19, 230, 916, 932, 1010, 1415, 1752
ScrFI	CCNGG	5 cut(s)	250, 399, 987, 998, 1401
SduI	GDGCHC	6 cut(s)	296, 449, 576, 1153, 1475, 1824
SexAI	ACCWGGT	1 cut(s)	1399
SfaNI	GCATC	3 cut(s)	384, 588, 1360
SfcI	CTRYAG	3 cut(s)	280, 904, 1287
SinI	GGWCC	2 cut(s)	691, 1623
SmlI	CTYRAG	1 cut(s)	1656
SmoI	CTYRAG	1 cut(s)	1656
SseBI	AGGCCT	1 cut(s)	617
SsiI	CCGC	3 cut(s)	111, 640, 648
SspMI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1631
StuI	AGGCCT	1 cut(s)	617
StyD4I	CCNGG	5 cut(s)	248, 397, 985, 996, 1399
StyI	CCWWGG	4 cut(s)	60, 316, 685, 1562
TaaI	ACNGT	2 cut(s)	334, 1015
TaiI	ACGT	2 cut(s)	1039, 1264
TaqI	TCGA	1 cut(s)	596
TaqII	GACCGA	1 cut(s)	1020
Tru1I	TTAA	8 cut(s)	663, 837, 878, 1089, 1218, 1443, 1697, 1846
Tru9I	TTAA	8 cut(s)	663, 837, 878, 1089, 1218, 1443, 1697, 1846
TscAI	CASTG	7 cut(s)	178, 337, 417, 449, 1018, 1242, 1648
TseFI	GTSAC	2 cut(s)	1032, 1037
TseI	GCWGC	3 cut(s)	737, 1025, 1352
Tsp45I	GTSAC	2 cut(s)	1032, 1037
TspGWI	ACGGA	2 cut(s)	133, 401
TspRI	CASTG	7 cut(s)	178, 337, 417, 449, 1018, 1242, 1648
Van91I	CCANNNNNTGG	1 cut(s)	1618
VneI	GTGCAC	2 cut(s)	445, 1149
VpaK11BI	GGWCC	2 cut(s)	691, 1623
XapI	RAATTY	5 cut(s)	605, 1171, 1214, 1300, 1637
XmiI	GTMKAC	2 cut(s)	1095, 1430
XmnI	GAANNNNTTC	1 cut(s)	810
XspI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1631
Zsp2I	ATGCAT	1 cut(s)	877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.