Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0009454

Physical Location & Seq

Genomic Coordinates Forward (+)

12066563 .. 12070102

Gene Structure 3540 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G012260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGAAGCCCTAGAAGCTTCTGCGACTCCAGCAAAGTCCCTGAACCCTAATTTGACCTCCAAGGTCAGGGTCATCGTTAGGGTTCGGCCTTTTCTTCCCCACGAAATCTCCGCCCTGAACGGCGATCACACTCCCTGCGCTTCCGTTCTTGACCTAGAATCTCAGTCGTCCACTGAAGAAGTCGTCGTTCATCTCAAAGATAAAGAATCAAGCCGAAAGGAGTGTTATCGGTTAGACTCGTTCTTTTCCGGGGAGGACAACAATGTAGCTCGGATTTTCTACAGGGAAGTGAGCCCTTTGATTCCGAGAATCTTCCAGGGCTTCAATTCCACTGTGTTTGCTTATGGAGCTACCGGTAGTGGAAAGACTTACACTATGCAGGGGACGGATGAGATGCCGGGTCTAATGCCACTGGCCATGTCCACGATCCTATCCATGTGCCAGTGCACCGGAGCCACAGCTGAGATTTCATACTATGAGGTCTATATGGACAGGTGTTATGATCTGTTAGAGGTCAAATCTCAGGAAATTGCTGTTTTGGATGACAAAGATGGTCGGATTCATCTTAGGGGGCTCTCTAGGGTGCCTATAAAGTCGATGCAAGAATTTGATGAGGCCTTGTCTTGTGGGATTCAGAGGCGGAAAACCGCGCATACGGGTCTTAATGATGTCTCTAGTAGGAGCCATGGGGTCCTTGTGATTTCTGTTTCCACTCCTTGTGATGGTGTTTCTGGGGCTGCTGTTACTGGGAAGTTGAACCTCATAGACTTGGCAGGCAACGAAGATAACAGAAGAACTTGCAATGAAGGGATTCGTCTCCAAGAGAGTGCAAAGATTAACCAGTCATTGTTTTCATTGTCAAATGTGATTTATGCATTAAACAACAATTTGTGCCGAGTTCCCTACAGAGAGAGTAAATTGACTCGTATATTGCAAGACTCACTAGGTGGGATGAGTGAGGCTTTGATGATTGCTTGCTTGAATCCAGGAGAGTACCAGGAGTCAGTTCACACTGTCAGCTTGGCAGCTCGGTCACGTCACATCACCAATTCGGTTCCTTCGGCTCACAAGCAAGAGACACCAAAGGTTAAAGTAGACATGGAAGCCAAACTTCATGCTTGGCTTGAATCCAGAGGAAAGACAAAGAGTGCACAAAGAGTTCAACCATTGAATTCTCCTTTCTTGGGAAAACCTCCACTCTCCTCTACCAAGAAATTTAACACCAACCTCAGCTCACTGAAGAAGCTTACTACTAACCGACGTGATGGAAGGGAAAGGACAATCACTACGGCTGTCAGGAATTTATTTGATGAAGGCCCAGTTGATACTAATTTGGAGAGCCTGCTAAATGCTGCTAAGGATAAGGGTGATGCTGAAACCGGTGGATTTGCAAGCTTACCTGGTGAGTCATCAAACCATGACGAGAAGTCTACAAGCTTTGTTAATTCATCACCTGAAAGTTCTTTCCCCTGTCAATACAATATAAACCCAAAACCCTTTGATGAACTGGTATCCATTGAGCCAAGGACACCCAAGACACCTTTTCCTGTAAATTGTATGAACAACAGATTCCAAAATCTGGGAACCCCACTAGAGAAATTCACTGCTTGTGGGTCTCAAGTAAAGAACTGCCTTGTTCAAGAGTATGTTGACTTCTTAAACACAGCCAACAGGGAGGAGCTACTGGAAATCAAGGGAATCGGAGTCAAATATGCAGACTACATACTCGGACTGAGAGAAACAAGCCCTTTACAATCGCTGAGCGATTTGGAGAAAGTAGGGCTCTCTTCTAAGCAGATTCACATCTTGTTTAACAAAGCTGCAATAGGAGTATTCAATGAAAAAGGAGATGCAAAACCCAAGTGTGCGGTGGATTCGCAAGTCCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000278 GO:0000280 GO:0000785 GO:0000819 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007049 GO:0007059 GO:0007062 GO:0007080 GO:0008150 GO:0009507 GO:0009536 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0072686 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

ko04914 map04914

Pfam Domains

Protein Families

HHH_3 Kinesin

Protein Analysis

629

Amino Acids

69.22

Weight (kDa)

6.87

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	18 - 170	1.3e-15	Microtubule binding
Kinesin	PF00225	27 - 348	4.7e-87	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02370
fragaria_vesca	FvH4_6g13700 FvH4_6g13700 FvH4_6g13700 FvH4_6g13700
malus_domestica	MD04G1129000.v1.1 MD12G1141700.v1.1
prunus_persica	Prupe.6G255200_v2.0.a1 Prupe.6G255200_v2.0.a1
pyrus_communis	pycom04g11720 pycom12g13640
rosa_chinensis	RchiOBHm_Chr3g0466571
rosa_laevigata	RLG00000024562
rosa_multiflora	Rmu_sc0020778.1_g000004
rosa_roxburghii	Rroxscaffold_6G00414340
rosa_rugosa	Rorug03G0082800 Rorug03G0082900
rosa_samantha	Rh3AG129700 Rh3BG151100 Rh3CG150800 Rh3DG151700
rosa_wichuraiana	Rw3G012260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	583
AccB7I	CCANNNNNTGG	1 cut(s)	1579
AccI	GTMKAC	2 cut(s)	1095, 1430
AccII	CGCG	1 cut(s)	650
AciI	CCGC	4 cut(s)	111, 640, 648, 1868
AclWI	GGATC	1 cut(s)	421
AcoI	YGGCCR	1 cut(s)	414
AcsI	RAATTY	5 cut(s)	605, 1171, 1214, 1300, 1598
AcuI	CTGAAG	2 cut(s)	195, 1259
AdeI	CACNNNGTG	1 cut(s)	947
AfaI	GTAC	1 cut(s)	995
AfiI	CCNNNNNNNGG	4 cut(s)	66, 722, 1184, 1579
AgeI	ACCGGT	2 cut(s)	353, 1379
AgsI	TTSAA	8 cut(s)	325, 757, 982, 1127, 1163, 1171, 1640, 1837
AhdI	GACNNNNNGTC	1 cut(s)	1426
AjiI	CACGTC	2 cut(s)	1037, 1262
AjnI	CCWGG	4 cut(s)	315, 985, 996, 1399
Alw21I	GWGCWC	2 cut(s)	449, 1153
Alw26I	GTCTC	4 cut(s)	676, 821, 1070, 1620
Alw44I	GTGCAC	2 cut(s)	445, 1149
AlwI	GGATC	1 cut(s)	421
AoxI	GGCC	4 cut(s)	86, 414, 615, 1315
ApaLI	GTGCAC	2 cut(s)	445, 1149
ApeKI	GCWGC	4 cut(s)	737, 1025, 1352, 1820
ApoI	RAATTY	5 cut(s)	605, 1171, 1214, 1300, 1598
AsiGI	ACCGGT	2 cut(s)	353, 1379
Asp700I	GAANNNNTTC	1 cut(s)	810
AspLEI	GCGC	2 cut(s)	140, 652
AspS9I	GGNCC	2 cut(s)	691, 1316
AsuC2I	CCSGG	2 cut(s)	250, 399
AsuHPI	GGTGA	4 cut(s)	1036, 1379, 1415, 1443
AvaII	GGWCC	1 cut(s)	691
BaeGI	GKGCMC	2 cut(s)	449, 1153
BalI	TGGCCA	1 cut(s)	416
BanI	GGYRCC	1 cut(s)	583
BanII	GRGCYC	3 cut(s)	296, 576, 1785
BarI	GAAGNNNNNNTAC	2 cut(s)	1637, 1669
Bbv12I	GWGCWC	2 cut(s)	449, 1153
BbvCI	CCTCAGC	1 cut(s)	1229
BbvI	GCAGC	4 cut(s)	724, 1037, 1339, 1807
BccI	CCATC	3 cut(s)	545, 716, 1259
BceAI	ACGGC	2 cut(s)	136, 1305
BciT130I	CCWGG	4 cut(s)	317, 987, 998, 1401
BciVI	GTATCC	1 cut(s)	1522
BcnI	CCSGG	2 cut(s)	250, 399
BcoDI	GTCTC	4 cut(s)	676, 821, 1070, 1620
BfaI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1592
BfmI	CTRYAG	2 cut(s)	280, 904
BfuI	GTATCC	1 cut(s)	1522
BisI	GCNGC	4 cut(s)	738, 1026, 1353, 1821
BlpI	GCTNAGC	1 cut(s)	1760
BlsI	GCNGC	4 cut(s)	739, 1027, 1354, 1822
Bme1390I	CCNGG	6 cut(s)	250, 317, 399, 987, 998, 1401
Bme18I	GGWCC	1 cut(s)	691
BmeRI	GACNNNNNGTC	1 cut(s)	1426
BmgBI	CACGTC	2 cut(s)	1037, 1262
BmgT120I	GGNCC	2 cut(s)	691, 1316
BmiI	GGNNCC	6 cut(s)	454, 585, 683, 692, 1056, 1585
BmrFI	CCNGG	6 cut(s)	250, 317, 399, 987, 998, 1401
BmrI	ACTGGG	2 cut(s)	756, 1313
BmsI	GCATC	4 cut(s)	384, 588, 1360, 1840
BmuI	ACTGGG	2 cut(s)	756, 1313
BpmI	CTGGAG	1 cut(s)	12
Bpu10I	CCTNAGC	2 cut(s)	1229, 1356
Bpu1102I	GCTNAGC	1 cut(s)	1760
BpuEI	CTTGAG	1 cut(s)	1602
BpuMI	CCSGG	2 cut(s)	250, 399
BsaBI	GATNNNNATC	1 cut(s)	1802
BsaI	GGTCTC	1 cut(s)	1620
BsaJI	CCNNGG	5 cut(s)	60, 249, 316, 685, 1523
BsaWI	WCCGGW	3 cut(s)	353, 449, 1379
BsaXI	ACNNNNNCTCC	2 cut(s)	92, 122
Bsc4I	CCNNNNNNNGG	4 cut(s)	66, 722, 1184, 1579
Bse118I	RCCGGY	2 cut(s)	353, 1379
Bse1I	ACTGG	8 cut(s)	417, 442, 751, 841, 1319, 1512, 1689, 1885
Bse3DI	GCAATG	1 cut(s)	808
Bse8I	GATNNNNATC	1 cut(s)	1802
BseBI	CCWGG	4 cut(s)	317, 987, 998, 1401
BseDI	CCNNGG	5 cut(s)	60, 249, 316, 685, 1523
BseGI	GGATG	3 cut(s)	394, 547, 957
BseJI	GATNNNNATC	1 cut(s)	1802
BseLI	CCNNNNNNNGG	4 cut(s)	66, 722, 1184, 1579
BseMI	GCAATG	1 cut(s)	808
BseMII	CTCAG	6 cut(s)	176, 453, 536, 1243, 1724, 1751
BseNI	ACTGG	8 cut(s)	417, 442, 751, 841, 1319, 1512, 1689, 1885
BseRI	GAGGAG	2 cut(s)	1192, 1691
BseSI	GKGCMC	2 cut(s)	449, 1153
BseXI	GCAGC	4 cut(s)	724, 1037, 1339, 1807
Bsh1236I	CGCG	1 cut(s)	650
BshFI	GGCC	4 cut(s)	88, 416, 617, 1317
BshNI	GGYRCC	1 cut(s)	583
BshTI	ACCGGT	2 cut(s)	353, 1379
BsiHKAI	GWGCWC	2 cut(s)	449, 1153
BsiSI	CCGG	5 cut(s)	249, 354, 398, 450, 1380
BslFI	GGGAC	2 cut(s)	22, 397
BslI	CCNNNNNNNGG	4 cut(s)	66, 722, 1184, 1579
BsmAI	GTCTC	4 cut(s)	676, 821, 1070, 1620
BsmBI	CGTCTC	1 cut(s)	821
BsmFI	GGGAC	2 cut(s)	22, 397
BsnI	GGCC	4 cut(s)	88, 416, 617, 1317
Bso31I	GGTCTC	1 cut(s)	1620
Bsp1286I	GDGCHC	5 cut(s)	296, 449, 576, 1153, 1785
Bsp143I	GATC	3 cut(s)	124, 426, 502
Bsp1720I	GCTNAGC	1 cut(s)	1760
Bsp19I	CCATGG	1 cut(s)	685
BspACI	CCGC	4 cut(s)	111, 640, 648, 1868
BspANI	GGCC	4 cut(s)	88, 416, 617, 1317
BspCNI	CTCAG	6 cut(s)	175, 454, 535, 1242, 1725, 1752
BspFNI	CGCG	1 cut(s)	650
BspLI	GGNNCC	6 cut(s)	454, 585, 683, 692, 1056, 1585
BspPI	GGATC	1 cut(s)	421
BspT107I	GGYRCC	1 cut(s)	583
BspTNI	GGTCTC	1 cut(s)	1620
BsrDI	GCAATG	1 cut(s)	808
BsrFI	RCCGGY	2 cut(s)	353, 1379
BsrI	ACTGG	8 cut(s)	417, 442, 751, 841, 1319, 1512, 1689, 1885
BssAI	RCCGGY	2 cut(s)	353, 1379
BssECI	CCNNGG	5 cut(s)	60, 249, 316, 685, 1523
BssMI	GATC	3 cut(s)	124, 426, 502
BssT1I	CCWWGG	3 cut(s)	60, 685, 1523
Bst2UI	CCWGG	4 cut(s)	317, 987, 998, 1401
Bst4CI	ACNGT	2 cut(s)	334, 1015
Bst6I	CTCTTC	1 cut(s)	1792
BstC8I	GCNNGC	4 cut(s)	775, 976, 1343, 1393
BstDEI	CTNAG	9 cut(s)	162, 462, 522, 566, 1229, 1356, 1733, 1760, 1791
BstDSI	CCRYGG	1 cut(s)	685
BstF5I	GGATG	3 cut(s)	394, 547, 957
BstFNI	CGCG	1 cut(s)	650
BstHHI	GCGC	2 cut(s)	140, 652
BstKTI	GATC	3 cut(s)	127, 429, 505
BstMAI	GTCTC	4 cut(s)	676, 821, 1070, 1620
BstMBI	GATC	3 cut(s)	124, 426, 502
BstMWI	GCNNNNNNNGC	3 cut(s)	14, 29, 347
BstNI	CCWGG	4 cut(s)	317, 987, 998, 1401
BstSCI	CCNGG	6 cut(s)	248, 315, 397, 985, 996, 1399
BstSFI	CTRYAG	2 cut(s)	280, 904
BstSLI	GKGCMC	2 cut(s)	449, 1153
BstUI	CGCG	1 cut(s)	650
BstV1I	GCAGC	4 cut(s)	724, 1037, 1339, 1807
BsuI	GTATCC	1 cut(s)	1522
BsuRI	GGCC	4 cut(s)	88, 416, 617, 1317
BtgI	CCRYGG	1 cut(s)	685
BtrI	CACGTC	2 cut(s)	1037, 1262
BtsCI	GGATG	3 cut(s)	394, 547, 957
BtsI	GCAGTG	1 cut(s)	1602
BtsIMutI	CAGTG	7 cut(s)	171, 330, 410, 449, 1011, 1235, 1602
Cac8I	GCNNGC	4 cut(s)	775, 976, 1343, 1393
CfoI	GCGC	2 cut(s)	140, 652
Cfr10I	RCCGGY	2 cut(s)	353, 1379
Cfr13I	GGNCC	2 cut(s)	691, 1316
CsiI	ACCWGGT	1 cut(s)	1399
Csp6I	GTAC	1 cut(s)	994
CspAI	ACCGGT	2 cut(s)	353, 1379
CspCI	CAANNNNNGTGG	2 cut(s)	319, 354
CviAII	CATG	6 cut(s)	418, 436, 686, 1099, 1115, 1418
CviQI	GTAC	1 cut(s)	994
DdeI	CTNAG	9 cut(s)	162, 462, 522, 566, 1229, 1356, 1733, 1760, 1791
DpnI	GATC	3 cut(s)	126, 428, 504
DpnII	GATC	3 cut(s)	124, 426, 502
DraIII	CACNNNGTG	1 cut(s)	947
DriI	GACNNNNNGTC	1 cut(s)	1426
EaeI	YGGCCR	1 cut(s)	414
Eam1104I	CTCTTC	1 cut(s)	1792
Eam1105I	GACNNNNNGTC	1 cut(s)	1426
EarI	CTCTTC	1 cut(s)	1792
EciI	GGCGGA	2 cut(s)	100, 655
Eco130I	CCWWGG	3 cut(s)	60, 685, 1523
Eco147I	AGGCCT	1 cut(s)	617
Eco24I	GRGCYC	3 cut(s)	296, 576, 1785
Eco31I	GGTCTC	1 cut(s)	1620
Eco47I	GGWCC	1 cut(s)	691
Eco57I	CTGAAG	2 cut(s)	195, 1259
EcoO109I	RGGNCCY	1 cut(s)	691
EcoRI	GAATTC	1 cut(s)	1171
EcoRII	CCWGG	4 cut(s)	315, 985, 996, 1399
EcoT14I	CCWWGG	3 cut(s)	60, 685, 1523
EcoT22I	ATGCAT	1 cut(s)	877
EcoT38I	GRGCYC	3 cut(s)	296, 576, 1785
ErhI	CCWWGG	3 cut(s)	60, 685, 1523
Esp3I	CGTCTC	1 cut(s)	821
FaeI	CATG	6 cut(s)	421, 439, 689, 1102, 1118, 1421
FalI	AAGNNNNNCTT	2 cut(s)	1095, 1127
FaqI	GGGAC	2 cut(s)	22, 397
FatI	CATG	6 cut(s)	417, 435, 685, 1098, 1114, 1417
FblI	GTMKAC	2 cut(s)	1095, 1430
Fnu4HI	GCNGC	4 cut(s)	738, 1026, 1353, 1821
FokI	GGATG	3 cut(s)	401, 554, 964
FriOI	GRGCYC	3 cut(s)	296, 576, 1785
Fsp4HI	GCNGC	4 cut(s)	738, 1026, 1353, 1821
FspBI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1592
GlaI	GCGC	2 cut(s)	139, 651
GluI	GCNGC	4 cut(s)	738, 1026, 1353, 1821
GsuI	CTGGAG	1 cut(s)	12
HaeIII	GGCC	4 cut(s)	88, 416, 617, 1317
HapII	CCGG	5 cut(s)	249, 354, 398, 450, 1380
HhaI	GCGC	2 cut(s)	140, 652
Hin1II	CATG	6 cut(s)	421, 439, 689, 1102, 1118, 1421
Hin6I	GCGC	2 cut(s)	138, 650
HinP1I	GCGC	2 cut(s)	138, 650
HincII	GTYRAC	1 cut(s)	1651
HindII	GTYRAC	1 cut(s)	1651
HindIII	AAGCTT	4 cut(s)	15, 1244, 1393, 1435
HpaII	CCGG	5 cut(s)	249, 354, 398, 450, 1380
HphI	GGTGA	4 cut(s)	1036, 1379, 1415, 1443
Hpy166II	GTNNAC	8 cut(s)	171, 423, 447, 1009, 1096, 1151, 1431, 1651
Hpy188I	TCNGA	6 cut(s)	273, 306, 558, 636, 1703, 1730
Hpy188III	TCNNGA	5 cut(s)	149, 524, 1131, 1297, 1640
Hpy8I	GTNNAC	8 cut(s)	171, 423, 447, 1009, 1096, 1151, 1431, 1651
Hpy99I	CGWCG	2 cut(s)	188, 1263
HpyAV	CCTTC	4 cut(s)	800, 1068, 1263, 1307
HpyCH4III	ACNGT	2 cut(s)	334, 1015
HpyCH4IV	ACGT	2 cut(s)	1036, 1261
HpyF10VI	GCNNNNNNNGC	3 cut(s)	14, 29, 347
HpyF3I	CTNAG	9 cut(s)	162, 462, 522, 566, 1229, 1356, 1733, 1760, 1791
HpySE526I	ACGT	2 cut(s)	1036, 1261
Hsp92II	CATG	6 cut(s)	421, 439, 689, 1102, 1118, 1421
HspAI	GCGC	2 cut(s)	138, 650
Kzo9I	GATC	3 cut(s)	124, 426, 502
LmnI	GCTCC	4 cut(s)	347, 452, 681, 1678
Lsp1109I	GCAGC	4 cut(s)	724, 1037, 1339, 1807
LweI	GCATC	4 cut(s)	384, 588, 1360, 1840
MabI	ACCWGGT	1 cut(s)	1399
MaeI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1592
MaeII	ACGT	2 cut(s)	1036, 1261
MaeIII	GTNAC	3 cut(s)	742, 1032, 1037
MalI	GATC	3 cut(s)	126, 428, 504
MboI	GATC	3 cut(s)	124, 426, 502
MboII	GAAGA	7 cut(s)	86, 188, 304, 794, 804, 1252, 1779
MhlI	GDGCHC	5 cut(s)	296, 449, 576, 1153, 1785
MlsI	TGGCCA	1 cut(s)	416
MluNI	TGGCCA	1 cut(s)	416
MlyI	GAGTC	7 cut(s)	19, 230, 916, 932, 1010, 1415, 1713
MmeI	TCCRAC	1 cut(s)	536
Mox20I	TGGCCA	1 cut(s)	416
Mph1103I	ATGCAT	1 cut(s)	877
MroXI	GAANNNNTTC	1 cut(s)	810
MscI	TGGCCA	1 cut(s)	416
MseI	TTAA	8 cut(s)	663, 837, 878, 1089, 1218, 1443, 1658, 1812
Msp20I	TGGCCA	1 cut(s)	416
MspA1I	CMGCKG	1 cut(s)	461
MspI	CCGG	5 cut(s)	249, 354, 398, 450, 1380
MspR9I	CCNGG	6 cut(s)	250, 317, 399, 987, 998, 1401
MvaI	CCWGG	4 cut(s)	317, 987, 998, 1401
MvnI	CGCG	1 cut(s)	650
MwoI	GCNNNNNNNGC	3 cut(s)	14, 29, 347
NciI	CCSGG	2 cut(s)	250, 399
NcoI	CCATGG	1 cut(s)	685
NdeII	GATC	3 cut(s)	124, 426, 502
NlaIII	CATG	6 cut(s)	421, 439, 689, 1102, 1118, 1421
NlaIV	GGNNCC	6 cut(s)	454, 585, 683, 692, 1056, 1585
NmeAIII	GCCGAG	1 cut(s)	920
NmuCI	GTSAC	2 cut(s)	1032, 1037
NsiI	ATGCAT	1 cut(s)	877
PceI	AGGCCT	1 cut(s)	617
PdmI	GAANNNNTTC	1 cut(s)	810
PflMI	CCANNNNNTGG	1 cut(s)	1579
PfoI	TCCNGGA	1 cut(s)	985
PinAI	ACCGGT	2 cut(s)	353, 1379
PkrI	GCNGC	4 cut(s)	739, 1027, 1354, 1822
PleI	GAGTC	7 cut(s)	19, 230, 916, 932, 1009, 1414, 1712
PpsI	GAGTC	7 cut(s)	19, 230, 916, 932, 1009, 1414, 1712
PpuMI	RGGWCCY	1 cut(s)	691
Psp5II	RGGWCCY	1 cut(s)	691
Psp6I	CCWGG	4 cut(s)	315, 985, 996, 1399
PspGI	CCWGG	4 cut(s)	315, 985, 996, 1399
PspN4I	GGNNCC	6 cut(s)	454, 585, 683, 692, 1056, 1585
PspPI	GGNCC	2 cut(s)	691, 1316
PspPPI	RGGWCCY	1 cut(s)	691
PvuII	CAGCTG	1 cut(s)	461
RsaI	GTAC	1 cut(s)	995
RsaNI	GTAC	1 cut(s)	994
SaqAI	TTAA	8 cut(s)	663, 837, 878, 1089, 1218, 1443, 1658, 1812
SatI	GCNGC	4 cut(s)	738, 1026, 1353, 1821
Sau3AI	GATC	3 cut(s)	124, 426, 502
Sau96I	GGNCC	2 cut(s)	691, 1316
SchI	GAGTC	7 cut(s)	19, 230, 916, 932, 1010, 1415, 1713
ScrFI	CCNGG	6 cut(s)	250, 317, 399, 987, 998, 1401
SduI	GDGCHC	5 cut(s)	296, 449, 576, 1153, 1785
SexAI	ACCWGGT	1 cut(s)	1399
SfaNI	GCATC	4 cut(s)	384, 588, 1360, 1840
SfcI	CTRYAG	2 cut(s)	280, 904
SinI	GGWCC	1 cut(s)	691
SmlI	CTYRAG	1 cut(s)	1617
SmoI	CTYRAG	1 cut(s)	1617
SseBI	AGGCCT	1 cut(s)	617
SsiI	CCGC	4 cut(s)	111, 640, 648, 1868
SspMI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1592
StuI	AGGCCT	1 cut(s)	617
StyD4I	CCNGG	6 cut(s)	248, 315, 397, 985, 996, 1399
StyI	CCWWGG	3 cut(s)	60, 685, 1523
TaaI	ACNGT	2 cut(s)	334, 1015
TaiI	ACGT	2 cut(s)	1039, 1264
TaqI	TCGA	1 cut(s)	596
TaqII	GACCGA	1 cut(s)	1020
Tru1I	TTAA	8 cut(s)	663, 837, 878, 1089, 1218, 1443, 1658, 1812
Tru9I	TTAA	8 cut(s)	663, 837, 878, 1089, 1218, 1443, 1658, 1812
TscAI	CASTG	7 cut(s)	178, 337, 417, 449, 1018, 1242, 1609
TseFI	GTSAC	2 cut(s)	1032, 1037
TseI	GCWGC	4 cut(s)	737, 1025, 1352, 1820
Tsp45I	GTSAC	2 cut(s)	1032, 1037
TspGWI	ACGGA	2 cut(s)	133, 401
TspRI	CASTG	7 cut(s)	178, 337, 417, 449, 1018, 1242, 1609
Van91I	CCANNNNNTGG	1 cut(s)	1579
VneI	GTGCAC	2 cut(s)	445, 1149
VpaK11BI	GGWCC	1 cut(s)	691
XapI	RAATTY	5 cut(s)	605, 1171, 1214, 1300, 1598
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1867
XmiI	GTMKAC	2 cut(s)	1095, 1430
XmnI	GAANNNNTTC	1 cut(s)	810
XspI	CTAG	6 cut(s)	11, 155, 579, 675, 944, 1592
Zsp2I	ATGCAT	1 cut(s)	877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.