Rh3CG314000

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0017473
Physical Location & Seq
Forward (+)
33351967 .. 33353361
1395 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG314000.1

Sequence Viewer

Length: 1395 bp
ATGGCTTCAGCGATTCTCTCATGGTTGAGTTTCGTATTAATAACACTGGGAGTACTAGGTGCACTGTTTGTTAACCCTTCATGTTCCACTTCAAGAAGAGCACTAGATCTCCACGACCATGGCTTACAGGTGCAAAGTGGGTTCAAGGTGACTCTCAAACACGTGGATTCTGGAAAGAACCTAACCAGACTCGAACGTCTTCAACGCCGAATCAAGCGAGGACGAAAGAGGCTGCAAAGGCTGAATGCAATGAAGCTCAAGAGCTCTACATCACCAGATAGTCATACCCAAGTTGAAACTCCGGTTCATGCAGGCCTGGGAGAGTTTTTGATGACGTTATCAGTTGGTACTCCGGCAAAGAGCTTTTCAGCAATTGTGGACACGGGGAGCGATCTTATATGGACTCAGTGCGAGCCATGCAAGCAATGTTATAAGCAGCCAACCCCGATTTTCAACCCGAAAGAGTCTTCTACTTTCTCAAAGGTGTCATGTACAAGCGAGCTATGTGATGCACTGCCCTCCTCGAAATGCACTAATAAAAGCTGTGAGTATTACTACACTTACGGCGATTCTTCATCAACGGATGGGATTCTCGCAACCGAAACGTTCTCTTTCGGAGACGAAGACTCCAGCGACGTTTCCATTCCCAAAATTAGTTTTGGATGTGGGGGAGATAACGAGGGTGGCGGGTTCAACCAAGGCGCGGGGCTCGTGGGGTTGGGCCGCGGAACCTTGTCCTTGGTTTCGCAGCTCAAGGAACCCAAGTTCTCCTATTGCCTTCCTTCCGTAGACGACACGCAAAGTACGAGCACACTTTTGATGGGGTCATTAGCAAGCTTGAACAGCAGCACATCATCATCTGATGTTGCAAACATCAAAACCACCCCTTTGATCAAAAACCCATCACAGCCTACTTTTTACTATCTTTCCCTTGAAGGAATCACCGTAGGGGGCACTCGCTTGCCTATCGCAAAAGACACATTCACCCTAGGAGATGATGGTGGCGGTGGCCTAATCATAGACTCTGGGACAACCCTTACTTATCTTGCAGAGGATGCTTACGATGCTGTTGTGAAAGAATTCACTTCCCAGATGGAACTTCCGGAGAAAGATGCGATCGACACAGTAGGGCTAGACCTGTGTTTCAAATTGCCAGAGGATGCTACCAAAGTAGAGGTGCCCAAGCTGGTATTTCATTTCAAGGATGCAGATTTGGAACTGCCTAGTGAGAATTATATGATTGCGGATTCGGACGTTGGAGTCATTTGCTTGGCTGCTGGGAGCGCCGGGGATATGTCTGTGTTTGGGAATTATCAGCAGCAGAATATGTTGGTTCTGCATGATCTAGTCAAGGAAACAATCTCGTTTGTTCCTACAAAATGCGACCAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04138 map04138
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

464

Amino Acids

49.91

Weight (kDa)

5.02

Isoelectric Point (pI)

41.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 109 - 276 1.2e-52 Xylanase inhibitor N-terminal
Asp PF00026 109 - 457 6e-18 Eukaryotic aspartyl protease
TAXi_C PF14541 307 - 457 2.2e-33 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017473)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G03200
fragaria_vesca FvH4_1g26890
malus_domestica MD09G1285800.v1.1
prunus_persica Prupe.3G007600_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0487141
rosa_laevigata RLG00000023027
rosa_roxburghii Rroxscaffold_6G00395110
rosa_rugosa Rorug03G0231600
rosa_samantha Rh3BG315700 Rh3CG314000 Rh3DG311000
rosa_wichuraiana Rw3G024780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 432
AasI GACNNNNNNGTC 2 cut(s) 195, 1259
AccB1I GGYRCC 1 cut(s) 1177
AccI GTMKAC 1 cut(s) 789
AccII CGCG 2 cut(s) 704, 726
AccIII TCCGGA 1 cut(s) 1102
AciI CCGC 6 cut(s) 687, 704, 724, 726, 1005, 1244
AclI AACGTT 1 cut(s) 605
AcsI RAATTY 1 cut(s) 1079
AcvI CACGTG 1 cut(s) 163
AfaI GTAC 4 cut(s) 54, 349, 493, 805
AfiI CCNNNNNNNGG 1 cut(s) 703
AflIII ACRYGT 1 cut(s) 160
AjnI CCWGG 1 cut(s) 315
AloI GAACNNNNNNTCC 2 cut(s) 749, 781
AluBI AGCT 8 cut(s) 256, 264, 363, 502, 543, 751, 837, 1186
AluI AGCT 8 cut(s) 256, 264, 363, 502, 543, 751, 837, 1186
Alw21I GWGCWC 4 cut(s) 64, 103, 266, 812
Alw26I GTCTC 1 cut(s) 612
Alw44I GTGCAC 1 cut(s) 60
Aor13HI TCCGGA 1 cut(s) 1102
AoxI GGCC 3 cut(s) 313, 721, 1009
ApaLI GTGCAC 1 cut(s) 60
ApeKI GCWGC 6 cut(s) 232, 436, 748, 846, 1274, 1318
ApoI RAATTY 1 cut(s) 1079
AseI ATTAAT 1 cut(s) 38
Asp700I GAANNNNTTC 2 cut(s) 198, 1079
AspA2I CCTAGG 1 cut(s) 988
AspLEI GCGC 2 cut(s) 704, 1286
AspS9I GGNCC 1 cut(s) 721
AsuC2I CCSGG 1 cut(s) 1288
AsuHPI GGTGA 4 cut(s) 160, 264, 934, 976
AvrII CCTAGG 1 cut(s) 988
BaeGI GKGCMC 3 cut(s) 64, 956, 1182
BanI GGYRCC 1 cut(s) 1177
BanII GRGCYC 2 cut(s) 266, 711
BauI CACGAG 1 cut(s) 710
BbrPI CACGTG 1 cut(s) 163
BbsI GAAGAC 3 cut(s) 191, 459, 630
Bbv12I GWGCWC 4 cut(s) 64, 103, 266, 812
BbvI GCAGC 6 cut(s) 219, 448, 760, 858, 1261, 1330
BccI CCATC 5 cut(s) 578, 814, 910, 992, 1087
BceAI ACGGC 1 cut(s) 580
BciT130I CCWGG 1 cut(s) 317
BclI TGATCA 1 cut(s) 891
BcnI CCSGG 1 cut(s) 1288
BcoDI GTCTC 1 cut(s) 612
BfaI CTAG 6 cut(s) 56, 104, 989, 1133, 1224, 1346
BfoI RGCGCY 1 cut(s) 1287
BglII AGATCT 1 cut(s) 106
BisI GCNGC 7 cut(s) 233, 437, 724, 749, 847, 1275, 1319
BlnI CCTAGG 1 cut(s) 988
BlsI GCNGC 7 cut(s) 234, 438, 725, 750, 848, 1276, 1320
BmcAI AGTACT 1 cut(s) 54
Bme1390I CCNGG 2 cut(s) 317, 1288
BmgT120I GGNCC 1 cut(s) 721
BmiI GGNNCC 3 cut(s) 730, 759, 1179
BmrFI CCNGG 2 cut(s) 317, 1288
BmrI ACTGGG 1 cut(s) 56
BmsI GCATC 6 cut(s) 499, 1045, 1054, 1102, 1150, 1195
BmuI ACTGGG 1 cut(s) 56
BpiI GAAGAC 3 cut(s) 191, 459, 630
BpmI CTGGAG 1 cut(s) 613
BpuEI CTTGAG 2 cut(s) 242, 737
BpuMI CCSGG 1 cut(s) 1288
BsaAI YACGTR 1 cut(s) 163
BsaJI CCNNGG 7 cut(s) 118, 316, 697, 724, 738, 988, 1287
BsaWI WCCGGW 2 cut(s) 301, 1102
BsaXI ACNNNNNCTCC 4 cut(s) 93, 123, 611, 641
Bsc4I CCNNNNNNNGG 1 cut(s) 703
Bse1I ACTGG 2 cut(s) 51, 1387
Bse3DI GCAATG 2 cut(s) 255, 431
BseAI TCCGGA 1 cut(s) 1102
BseBI CCWGG 1 cut(s) 317
BseDI CCNNGG 7 cut(s) 118, 316, 697, 724, 738, 988, 1287
BseGI GGATG 5 cut(s) 589, 668, 1060, 1165, 1210
BseLI CCNNNNNNNGG 1 cut(s) 703
BseMI GCAATG 2 cut(s) 255, 431
BseMII CTCAG 1 cut(s) 419
BseNI ACTGG 2 cut(s) 51, 1387
BseRI GAGGAG 1 cut(s) 511
BseSI GKGCMC 3 cut(s) 64, 956, 1182
BseXI GCAGC 6 cut(s) 219, 448, 760, 858, 1261, 1330
BseYI CCCAGC 1 cut(s) 1277
Bsh1236I CGCG 2 cut(s) 704, 726
Bsh1285I CGRYCG 1 cut(s) 1119
BshFI GGCC 3 cut(s) 315, 723, 1011
BshNI GGYRCC 1 cut(s) 1177
BsiEI CGRYCG 1 cut(s) 1119
BsiHKAI GWGCWC 4 cut(s) 64, 103, 266, 812
BsiSI CCGG 4 cut(s) 302, 353, 1103, 1287
BslFI GGGAC 1 cut(s) 1042
BslI CCNNNNNNNGG 1 cut(s) 703
BsmAI GTCTC 1 cut(s) 612
BsmBI CGTCTC 1 cut(s) 612
BsmFI GGGAC 1 cut(s) 1042
BsmI GAATGC 1 cut(s) 250
BsnI GGCC 3 cut(s) 315, 723, 1011
Bsp1286I GDGCHC 7 cut(s) 64, 103, 266, 711, 812, 956, 1182
Bsp13I TCCGGA 1 cut(s) 1102
Bsp1407I TGTACA 1 cut(s) 491
Bsp143I GATC 5 cut(s) 106, 391, 891, 1116, 1342
Bsp19I CCATGG 1 cut(s) 118
BspACI CCGC 6 cut(s) 687, 704, 724, 726, 1005, 1244
BspANI GGCC 3 cut(s) 315, 723, 1011
BspCNI CTCAG 1 cut(s) 418
BspEI TCCGGA 1 cut(s) 1102
BspFNI CGCG 2 cut(s) 704, 726
BspLI GGNNCC 3 cut(s) 730, 759, 1179
BspQI GCTCTTC 1 cut(s) 91
BspT107I GGYRCC 1 cut(s) 1177
BsrDI GCAATG 2 cut(s) 255, 431
BsrGI TGTACA 1 cut(s) 491
BsrI ACTGG 2 cut(s) 51, 1387
BssECI CCNNGG 7 cut(s) 118, 316, 697, 724, 738, 988, 1287
BssMI GATC 5 cut(s) 106, 391, 891, 1116, 1342
BssSI CACGAG 1 cut(s) 710
BssT1I CCWWGG 4 cut(s) 118, 697, 738, 988
Bst2BI CACGAG 1 cut(s) 710
Bst2UI CCWGG 1 cut(s) 317
Bst4CI ACNGT 3 cut(s) 66, 946, 1126
Bst6I CTCTTC 1 cut(s) 91
BstAPI GCANNNNNTGC 1 cut(s) 1055
BstAUI TGTACA 1 cut(s) 491
BstBAI YACGTR 1 cut(s) 163
BstC8I GCNNGC 6 cut(s) 313, 413, 422, 500, 835, 962
BstDEI CTNAG 1 cut(s) 405
BstDSI CCRYGG 2 cut(s) 118, 724
BstF5I GGATG 5 cut(s) 589, 668, 1060, 1165, 1210
BstFNI CGCG 2 cut(s) 704, 726
BstH2I RGCGCY 1 cut(s) 1287
BstHHI GCGC 2 cut(s) 704, 1286
BstKTI GATC 5 cut(s) 109, 394, 894, 1119, 1345
BstMAI GTCTC 1 cut(s) 612
BstMBI GATC 5 cut(s) 106, 391, 891, 1116, 1342
BstMCI CGRYCG 1 cut(s) 1119
BstMWI GCNNNNNNNGC 7 cut(s) 238, 417, 421, 843, 1055, 1064, 1283
BstNI CCWGG 1 cut(s) 317
BstSCI CCNGG 2 cut(s) 315, 1286
BstSLI GKGCMC 3 cut(s) 64, 956, 1182
BstUI CGCG 2 cut(s) 704, 726
BstV1I GCAGC 6 cut(s) 219, 448, 760, 858, 1261, 1330
BstV2I GAAGAC 3 cut(s) 191, 459, 630
BstX2I RGATCY 1 cut(s) 106
BstXI CCANNNNNNTGG 1 cut(s) 119
BstYI RGATCY 1 cut(s) 106
BsuRI GGCC 3 cut(s) 315, 723, 1011
BtgI CCRYGG 2 cut(s) 118, 724
BtsCI GGATG 5 cut(s) 589, 668, 1060, 1165, 1210
BtsI GCAGTG 1 cut(s) 512
BtsIMutI CAGTG 4 cut(s) 44, 62, 413, 512
Cac8I GCNNGC 6 cut(s) 313, 413, 422, 500, 835, 962
CfoI GCGC 2 cut(s) 704, 1286
Cfr13I GGNCC 1 cut(s) 721
Cfr42I CCGCGG 1 cut(s) 727
Csp6I GTAC 4 cut(s) 53, 348, 492, 804
CviAII CATG 7 cut(s) 21, 81, 119, 308, 417, 489, 1340
CviQI GTAC 4 cut(s) 53, 348, 492, 804
DdeI CTNAG 1 cut(s) 405
DpnI GATC 5 cut(s) 108, 393, 893, 1118, 1344
DpnII GATC 5 cut(s) 106, 391, 891, 1116, 1342
DrdI GACNNNNNNGTC 2 cut(s) 195, 1259
DseDI GACNNNNNNGTC 2 cut(s) 195, 1259
Eam1104I CTCTTC 1 cut(s) 91
EarI CTCTTC 1 cut(s) 91
Ecl136II GAGCTC 1 cut(s) 264
Eco130I CCWWGG 4 cut(s) 118, 697, 738, 988
Eco147I AGGCCT 1 cut(s) 315
Eco24I GRGCYC 2 cut(s) 266, 711
Eco53kI GAGCTC 1 cut(s) 264
Eco72I CACGTG 1 cut(s) 163
EcoICRI GAGCTC 1 cut(s) 264
EcoRI GAATTC 1 cut(s) 1079
EcoRII CCWGG 1 cut(s) 315
EcoT14I CCWWGG 4 cut(s) 118, 697, 738, 988
EcoT38I GRGCYC 2 cut(s) 266, 711
ErhI CCWWGG 4 cut(s) 118, 697, 738, 988
Esp3I CGTCTC 1 cut(s) 612
FaeI CATG 7 cut(s) 24, 84, 122, 311, 420, 492, 1343
FaqI GGGAC 1 cut(s) 1042
FatI CATG 7 cut(s) 20, 80, 118, 307, 416, 488, 1339
FauI CCCGC 2 cut(s) 680, 697
FbaI TGATCA 1 cut(s) 891
FblI GTMKAC 1 cut(s) 789
Fnu4HI GCNGC 7 cut(s) 233, 437, 724, 749, 847, 1275, 1319
FokI GGATG 5 cut(s) 596, 675, 1067, 1172, 1217
FriOI GRGCYC 2 cut(s) 266, 711
Fsp4HI GCNGC 7 cut(s) 233, 437, 724, 749, 847, 1275, 1319
FspBI CTAG 6 cut(s) 56, 104, 989, 1133, 1224, 1346
GlaI GCGC 2 cut(s) 703, 1285
GluI GCNGC 7 cut(s) 233, 437, 724, 749, 847, 1275, 1319
GsaI CCCAGC 1 cut(s) 1281
GsuI CTGGAG 1 cut(s) 613
HaeII RGCGCY 1 cut(s) 1287
HaeIII GGCC 3 cut(s) 315, 723, 1011
HapII CCGG 4 cut(s) 302, 353, 1103, 1287
HhaI GCGC 2 cut(s) 704, 1286
Hin1II CATG 7 cut(s) 24, 84, 122, 311, 420, 492, 1343
Hin6I GCGC 2 cut(s) 702, 1284
HinP1I GCGC 2 cut(s) 702, 1284
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HindIII AAGCTT 1 cut(s) 835
HpaI GTTAAC 1 cut(s) 73
HpaII CCGG 4 cut(s) 302, 353, 1103, 1287
HphI GGTGA 4 cut(s) 160, 264, 934, 976
Hpy166II GTNNAC 4 cut(s) 62, 73, 379, 790
Hpy188I TCNGA 3 cut(s) 617, 862, 1252
Hpy188III TCNNGA 4 cut(s) 93, 171, 259, 1103
Hpy8I GTNNAC 4 cut(s) 62, 73, 379, 790
Hpy99I CGWCG 1 cut(s) 638
HpyAV CCTTC 4 cut(s) 87, 788, 792, 929
HpyCH4III ACNGT 3 cut(s) 66, 946, 1126
HpyCH4IV ACGT 6 cut(s) 162, 196, 335, 605, 636, 1254
HpyF10VI GCNNNNNNNGC 7 cut(s) 238, 417, 421, 843, 1055, 1064, 1283
HpyF3I CTNAG 1 cut(s) 405
HpySE526I ACGT 6 cut(s) 162, 196, 335, 605, 636, 1254
Hsp92II CATG 7 cut(s) 24, 84, 122, 311, 420, 492, 1343
HspAI GCGC 2 cut(s) 702, 1284
Kpn2I TCCGGA 1 cut(s) 1102
Ksp22I TGATCA 1 cut(s) 891
KspAI GTTAAC 1 cut(s) 73
KspI CCGCGG 1 cut(s) 727
Kzo9I GATC 5 cut(s) 106, 391, 891, 1116, 1342
LguI GCTCTTC 1 cut(s) 91
LmnI GCTCC 2 cut(s) 387, 1281
Lsp1109I GCAGC 6 cut(s) 219, 448, 760, 858, 1261, 1330
LweI GCATC 6 cut(s) 499, 1045, 1054, 1102, 1150, 1195
MaeI CTAG 6 cut(s) 56, 104, 989, 1133, 1224, 1346
MaeII ACGT 6 cut(s) 162, 196, 335, 605, 636, 1254
MaeIII GTNAC 1 cut(s) 148
MalI GATC 5 cut(s) 108, 393, 893, 1118, 1344
MboI GATC 5 cut(s) 106, 391, 891, 1116, 1342
MboII GAAGA 5 cut(s) 108, 191, 459, 564, 635
MfeI CAATTG 1 cut(s) 372
MflI RGATCY 1 cut(s) 106
MhlI GDGCHC 7 cut(s) 64, 103, 266, 711, 812, 956, 1182
MluCI AATT 6 cut(s) 372, 651, 1079, 1148, 1231, 1309
MlyI GAGTC 7 cut(s) 145, 183, 397, 473, 620, 1016, 1269
MmeI TCCRAC 1 cut(s) 1237
MnlI CCTC 8 cut(s) 212, 222, 529, 532, 673, 1045, 1150, 1168
MroI TCCGGA 1 cut(s) 1102
MroXI GAANNNNTTC 2 cut(s) 198, 1079
MseI TTAA 2 cut(s) 38, 72
MslI CAYNNNNRTG 1 cut(s) 117
MspA1I CMGCKG 1 cut(s) 726
MspI CCGG 4 cut(s) 302, 353, 1103, 1287
MspR9I CCNGG 2 cut(s) 317, 1288
MunI CAATTG 1 cut(s) 372
Mva1269I GAATGC 1 cut(s) 250
MvaI CCWGG 1 cut(s) 317
MvnI CGCG 2 cut(s) 704, 726
MwoI GCNNNNNNNGC 7 cut(s) 238, 417, 421, 843, 1055, 1064, 1283
NciI CCSGG 1 cut(s) 1288
NcoI CCATGG 1 cut(s) 118
NdeII GATC 5 cut(s) 106, 391, 891, 1116, 1342
NlaIII CATG 7 cut(s) 24, 84, 122, 311, 420, 492, 1343
NlaIV GGNNCC 3 cut(s) 730, 759, 1179
NmuCI GTSAC 1 cut(s) 148
PceI AGGCCT 1 cut(s) 315
PciSI GCTCTTC 1 cut(s) 91
PcsI WCGNNNNNNNCGW 1 cut(s) 803
PctI GAATGC 1 cut(s) 250
PdmI GAANNNNTTC 2 cut(s) 198, 1079
PfeI GAWTC 7 cut(s) 13, 167, 210, 569, 589, 939, 1247
PkrI GCNGC 7 cut(s) 234, 438, 725, 750, 848, 1276, 1320
Ple19I CGATCG 1 cut(s) 1119
PleI GAGTC 7 cut(s) 145, 183, 397, 472, 620, 1016, 1268
PmaCI CACGTG 1 cut(s) 163
PmlI CACGTG 1 cut(s) 163
PpsI GAGTC 7 cut(s) 145, 183, 397, 472, 620, 1016, 1268
Ppu21I YACGTR 1 cut(s) 163
PshBI ATTAAT 1 cut(s) 38
PsiI TTATAA 1 cut(s) 432
Psp124BI GAGCTC 1 cut(s) 266
Psp1406I AACGTT 1 cut(s) 605
Psp6I CCWGG 1 cut(s) 315
PspCI CACGTG 1 cut(s) 163
PspFI CCCAGC 1 cut(s) 1277
PspGI CCWGG 1 cut(s) 315
PspN4I GGNNCC 3 cut(s) 730, 759, 1179
PspPI GGNCC 1 cut(s) 721
PsuI RGATCY 1 cut(s) 106
PvuI CGATCG 1 cut(s) 1119
RsaI GTAC 4 cut(s) 54, 349, 493, 805
RsaNI GTAC 4 cut(s) 53, 348, 492, 804
RseI CAYNNNNRTG 1 cut(s) 117
SacI GAGCTC 1 cut(s) 266
SacII CCGCGG 1 cut(s) 727
SapI GCTCTTC 1 cut(s) 91
SaqAI TTAA 2 cut(s) 38, 72
SatI GCNGC 7 cut(s) 233, 437, 724, 749, 847, 1275, 1319
Sau3AI GATC 5 cut(s) 106, 391, 891, 1116, 1342
Sau96I GGNCC 1 cut(s) 721
ScaI AGTACT 1 cut(s) 54
SchI GAGTC 7 cut(s) 145, 183, 397, 473, 620, 1016, 1269
ScrFI CCNGG 2 cut(s) 317, 1288
SduI GDGCHC 7 cut(s) 64, 103, 266, 711, 812, 956, 1182
SfaNI GCATC 6 cut(s) 499, 1045, 1054, 1102, 1150, 1195
Sfr303I CCGCGG 1 cut(s) 727
SgrBI CCGCGG 1 cut(s) 727
SmiMI CAYNNNNRTG 1 cut(s) 117
SmlI CTYRAG 2 cut(s) 257, 752
SmoI CTYRAG 2 cut(s) 257, 752
Sse9I AATT 6 cut(s) 372, 651, 1079, 1148, 1231, 1309
SseBI AGGCCT 1 cut(s) 315
SsiI CCGC 6 cut(s) 687, 704, 724, 726, 1005, 1244
SspMI CTAG 6 cut(s) 56, 104, 989, 1133, 1224, 1346
SstI GAGCTC 1 cut(s) 266
StuI AGGCCT 1 cut(s) 315
StyD4I CCNGG 2 cut(s) 315, 1286
StyI CCWWGG 4 cut(s) 118, 697, 738, 988
TaaI ACNGT 3 cut(s) 66, 946, 1126
TaiI ACGT 6 cut(s) 165, 199, 338, 608, 639, 1257
TaqI TCGA 3 cut(s) 192, 524, 1119
TasI AATT 6 cut(s) 372, 651, 1079, 1148, 1231, 1309
TatI WGTACW 2 cut(s) 52, 491
TauI GCSGC 1 cut(s) 726
TfiI GAWTC 7 cut(s) 13, 167, 210, 569, 589, 939, 1247
Tru1I TTAA 2 cut(s) 38, 72
Tru9I TTAA 2 cut(s) 38, 72
TscAI CASTG 4 cut(s) 51, 69, 413, 519
TseFI GTSAC 1 cut(s) 148
TseI GCWGC 6 cut(s) 232, 436, 748, 846, 1274, 1318
Tsp45I GTSAC 1 cut(s) 148
TspDTI ATGAA 5 cut(s) 69, 266, 296, 564, 1184
TspGWI ACGGA 2 cut(s) 596, 775
TspRI CASTG 4 cut(s) 51, 69, 413, 519
VneI GTGCAC 1 cut(s) 60
VspI ATTAAT 1 cut(s) 38
XapI RAATTY 1 cut(s) 1079
XmaJI CCTAGG 1 cut(s) 988
XmiI GTMKAC 1 cut(s) 789
XmnI GAANNNNTTC 2 cut(s) 198, 1079
XspI CTAG 6 cut(s) 56, 104, 989, 1133, 1224, 1346
ZrmI AGTACT 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.