transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g26741 |
| prunus_persica | Prupe.1G316600_v2.0.a1 |
| rosa_laevigata | RLG00000023290 |
| rosa_samantha | Rh3CG288000 Rh3DG283800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 242 |
| AfaI | GTAC | 5 cut(s) | 43, 283, 290, 366, 413 |
| AgsI | TTSAA | 1 cut(s) | 35 |
| AjiI | CACGTC | 1 cut(s) | 418 |
| AluBI | AGCT | 1 cut(s) | 14 |
| AluI | AGCT | 1 cut(s) | 14 |
| Alw26I | GTCTC | 1 cut(s) | 243 |
| ApeKI | GCWGC | 1 cut(s) | 257 |
| AspLEI | GCGC | 1 cut(s) | 229 |
| AspS9I | GGNCC | 1 cut(s) | 194 |
| AvaII | GGWCC | 1 cut(s) | 194 |
| BbvI | GCAGC | 1 cut(s) | 244 |
| BccI | CCATC | 1 cut(s) | 166 |
| BcoDI | GTCTC | 1 cut(s) | 243 |
| BfaI | CTAG | 1 cut(s) | 421 |
| BfmI | CTRYAG | 2 cut(s) | 6, 273 |
| BfoI | RGCGCY | 1 cut(s) | 230 |
| BisI | GCNGC | 1 cut(s) | 258 |
| BlsI | GCNGC | 1 cut(s) | 259 |
| BmcAI | AGTACT | 1 cut(s) | 366 |
| Bme18I | GGWCC | 1 cut(s) | 194 |
| BmgBI | CACGTC | 1 cut(s) | 418 |
| BmgT120I | GGNCC | 1 cut(s) | 194 |
| BsaAI | YACGTR | 1 cut(s) | 288 |
| BsaJI | CCNNGG | 2 cut(s) | 81, 353 |
| Bse3DI | GCAATG | 1 cut(s) | 273 |
| BseDI | CCNNGG | 2 cut(s) | 81, 353 |
| BseGI | GGATG | 1 cut(s) | 291 |
| BseMI | GCAATG | 1 cut(s) | 273 |
| BseXI | GCAGC | 1 cut(s) | 244 |
| BseYI | CCCAGC | 1 cut(s) | 223 |
| BsgI | GTGCAG | 1 cut(s) | 243 |
| BsmAI | GTCTC | 1 cut(s) | 243 |
| BsmBI | CGTCTC | 1 cut(s) | 243 |
| BsmI | GAATGC | 1 cut(s) | 22 |
| Bsp19I | CCATGG | 1 cut(s) | 81 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BsrDI | GCAATG | 1 cut(s) | 273 |
| BssECI | CCNNGG | 2 cut(s) | 81, 353 |
| BssT1I | CCWWGG | 2 cut(s) | 81, 353 |
| BstBAI | YACGTR | 1 cut(s) | 288 |
| BstDSI | CCRYGG | 1 cut(s) | 81 |
| BstF5I | GGATG | 1 cut(s) | 291 |
| BstH2I | RGCGCY | 1 cut(s) | 230 |
| BstHHI | GCGC | 1 cut(s) | 229 |
| BstMAI | GTCTC | 1 cut(s) | 243 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 263 |
| BstSFI | CTRYAG | 2 cut(s) | 6, 273 |
| BstV1I | GCAGC | 1 cut(s) | 244 |
| BtgI | CCRYGG | 1 cut(s) | 81 |
| BtrI | CACGTC | 1 cut(s) | 418 |
| BtsCI | GGATG | 1 cut(s) | 291 |
| CfoI | GCGC | 1 cut(s) | 229 |
| Cfr13I | GGNCC | 1 cut(s) | 194 |
| Csp6I | GTAC | 5 cut(s) | 42, 282, 289, 365, 412 |
| CviAII | CATG | 3 cut(s) | 67, 82, 253 |
| CviJI | RGCY | 4 cut(s) | 5, 14, 257, 317 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 14, 257, 317 |
| CviQI | GTAC | 5 cut(s) | 42, 282, 289, 365, 412 |
| EciI | GGCGGA | 1 cut(s) | 231 |
| Eco130I | CCWWGG | 2 cut(s) | 81, 353 |
| Eco47I | GGWCC | 1 cut(s) | 194 |
| EcoT14I | CCWWGG | 2 cut(s) | 81, 353 |
| ErhI | CCWWGG | 2 cut(s) | 81, 353 |
| Esp3I | CGTCTC | 1 cut(s) | 243 |
| FaeI | CATG | 3 cut(s) | 70, 85, 256 |
| FaiI | YATR | 9 cut(s) | 8, 17, 68, 73, 75, 77, 83, 254, 275 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 127, 159 |
| FatI | CATG | 3 cut(s) | 66, 81, 252 |
| Fnu4HI | GCNGC | 1 cut(s) | 258 |
| FokI | GGATG | 1 cut(s) | 278 |
| Fsp4HI | GCNGC | 1 cut(s) | 258 |
| FspBI | CTAG | 1 cut(s) | 421 |
| GlaI | GCGC | 1 cut(s) | 228 |
| GluI | GCNGC | 1 cut(s) | 258 |
| GsaI | CCCAGC | 1 cut(s) | 227 |
| HaeII | RGCGCY | 1 cut(s) | 230 |
| HhaI | GCGC | 1 cut(s) | 229 |
| Hin1II | CATG | 3 cut(s) | 70, 85, 256 |
| Hin6I | GCGC | 1 cut(s) | 227 |
| HinP1I | GCGC | 1 cut(s) | 227 |
| HinfI | GANTC | 1 cut(s) | 326 |
| Hpy188III | TCNNGA | 1 cut(s) | 90 |
| HpyCH4IV | ACGT | 2 cut(s) | 287, 417 |
| HpyCH4V | TGCA | 3 cut(s) | 260, 348, 401 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 263 |
| HpySE526I | ACGT | 2 cut(s) | 287, 417 |
| Hsp92II | CATG | 3 cut(s) | 70, 85, 256 |
| HspAI | GCGC | 1 cut(s) | 227 |
| LpnPI | CCDG | 6 cut(s) | 12, 75, 111, 195, 237, 358 |
| Lsp1109I | GCAGC | 1 cut(s) | 244 |
| MaeI | CTAG | 1 cut(s) | 421 |
| MaeII | ACGT | 2 cut(s) | 287, 417 |
| MaeIII | GTNAC | 1 cut(s) | 205 |
| MluCI | AATT | 3 cut(s) | 62, 118, 218 |
| MnlI | CCTC | 3 cut(s) | 122, 225, 243 |
| MseI | TTAA | 1 cut(s) | 105 |
| Mva1269I | GAATGC | 1 cut(s) | 22 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 263 |
| NcoI | CCATGG | 1 cut(s) | 81 |
| NlaIII | CATG | 3 cut(s) | 70, 85, 256 |
| PctI | GAATGC | 1 cut(s) | 22 |
| PfeI | GAWTC | 1 cut(s) | 326 |
| PkrI | GCNGC | 1 cut(s) | 259 |
| Ppu21I | YACGTR | 1 cut(s) | 288 |
| PspFI | CCCAGC | 1 cut(s) | 223 |
| PspPI | GGNCC | 1 cut(s) | 194 |
| RsaI | GTAC | 5 cut(s) | 43, 283, 290, 366, 413 |
| RsaNI | GTAC | 5 cut(s) | 42, 282, 289, 365, 412 |
| SaqAI | TTAA | 1 cut(s) | 105 |
| SatI | GCNGC | 1 cut(s) | 258 |
| Sau96I | GGNCC | 1 cut(s) | 194 |
| ScaI | AGTACT | 1 cut(s) | 366 |
| SetI | ASST | 4 cut(s) | 16, 235, 290, 420 |
| SfcI | CTRYAG | 2 cut(s) | 6, 273 |
| SinI | GGWCC | 1 cut(s) | 194 |
| Sse9I | AATT | 3 cut(s) | 62, 118, 218 |
| SsiI | CCGC | 1 cut(s) | 242 |
| SspI | AATATT | 1 cut(s) | 109 |
| SspMI | CTAG | 1 cut(s) | 421 |
| StyI | CCWWGG | 2 cut(s) | 81, 353 |
| TaiI | ACGT | 2 cut(s) | 290, 420 |
| TasI | AATT | 3 cut(s) | 62, 118, 218 |
| TatI | WGTACW | 1 cut(s) | 364 |
| TfiI | GAWTC | 1 cut(s) | 326 |
| Tru1I | TTAA | 1 cut(s) | 105 |
| Tru9I | TTAA | 1 cut(s) | 105 |
| TseI | GCWGC | 1 cut(s) | 257 |
| TspDTI | ATGAA | 2 cut(s) | 55, 241 |
| TspGWI | ACGGA | 1 cut(s) | 225 |
| VpaK11BI | GGWCC | 1 cut(s) | 194 |
| XspI | CTAG | 1 cut(s) | 421 |
| ZrmI | AGTACT | 1 cut(s) | 366 |