Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0006154

Physical Location & Seq

Genomic Coordinates Forward (+)

56686699 .. 56692840

Gene Structure 6142 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG422200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGGGCACCAGCCCTTTATATGTCTTCACTGATGTGTTCAGCAGGGTGAAAATTGATTCAGATGTTGATGTCTTGGGGGCTTTATCACTAGTGATGTACACAATTGCCATTATACCTTTAGCAAAATATGTTTTTGTAGTTCTCAAAGCCAATGACAATGGAGAAGGAGGAACATTTGCCTTGTATTCACTGATATGCAGATATGCAAAGGTTAATATGTTGCCAAATCAACAGCCAGCTGATGAACATATCTCAAGCTTTAGACTAAAATTACCCACTCCAGAATTGAAGAGGGCTTTGCGTATAAAAGAGACTTTAGAAAAGAGATCAGCCTCAAAAACTCTCCTCTTGTTGTTCGTTTTGATGGGAACTTCAATGATTATAGGAGATGGTATTCTAACCCCTGCAATATCAGTGATGTCCGCTGTCAGTGGCCTGCAGGGTGAAGTTCCCGGATTTGGCACAAATGCTGTCGTTGTTGTTTCAATCCTAATCCTCGTGGTATTGTTCGGCATACAGCGGTTTGGGACTAGTAAAGTGGGTGTCATGTTTTCTCCTATCCTTGCTTTGTGGTTTCTCTCTCTGGGATCTATTGGACTTTACAATCTACTGAAGCATGATATCACTGTCCTGAGGGCATTCAATCCTATTTATATTTATCTATTCTTCAAGAAGCACGATAAAGAAGCGTGGTATGCTCTTGGTGGTTGTGTTCTATGCATAACAGGAGCTGAAGCTATGTTTGCTGATCTAGGACATTTCTCTGTACGAGCCATACAGATTGCCTTCTCTTTTGTGGTGTTCCCATGCCTCCTCTTTGCATACATGGGTCAAGCTGCTTATCTTATGAAATACCCTGATTCTTCTCGTAGAATATTCTATGATTCTGTACCAGATAGTCTTTTTTGGCCAGTCATTGTGATAGCCACACTTGCAGCGATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCATGTGTCAAGCAATCTATGGCTCTTGGATGTTTTCCAAGGCTGAAGATAGTGCACACCTCAAGGAGGATGATGGGCCAAATTTACATCCCTGTTATCAATTGGTTTTTGATGGTCATGTGCATAGTTGTAGTTGCCATCTTTCGGAGCACCACAGAGATTGCCAATGCATATGGCATAGCTGAGGTTGGTGTGATGATAGTTACCACTAGCTTGGTGACACTCGTTATGCTTCTCATTTGGCAGACCAACTTGTTTCTGGCTTTGTGTTTCCCACTTGTATTTGGTTCAGTAGAGCTCATCTACTTGTCTGCGGTTTTATCAAAGTTTTATCAGGGTGGTTGGCTGCCACTTGTTTTTGCTTCTTTCTTCCTCTGTGTAATGTACATTTGGAACTATGGGAGTGTGTTGAAGTACCGAAGTGAAGTCAGGGAGAAGATATCCATGGACTTCATGACTGAGCTTGGCTCCACCCTTGGGACTGTGAGAGTGCCAGGAATCGGAATGATGTATAGTGAGCTTGTCCAAGGCATCCCATCCATTCTTGGGCAATTCCTTCTCAACTTACCAGCTATCCACTCTGTTCTAGTTGTTGTTTGCATCAAGTATGTCCCGGTGCCTGTGGTTCCTCAGGAAGAGAGGTTTCTGTTCCGAAGACTTTGCCCAAAAGACTATCATATGTTCCGTTGTATTGCTCGGTATGGTTACACAGATATTCGGAAGGAAGATCACCATTCATTTGAGCAACTTCTTGTTGAAAGCCTGGAGAAGTTTTTGAGGAGGGAGGCTCAAGATCTTGCATTGGAGAACTGGAATGAATCAGACAGTGAGAGCGTTTCCGTTGGGTTCCCAGAAGGCGATGGGATTGATGAATTTAAAATCCCATTGATGCGTGATTCAAGACTCCAAGGATCTTCTACTGCCTCGGAAGAAACTGGTATTAGTGCAGCGTTGCCGTCTAGTATGATGTCATCAGATGAAGACCCTGGTCTGGAGTACGAGCTCTCAGCTCTGCGAGAAGCAACCGAATCAGGATTCACTTATCTGCTTGCACATGCGGATGTGAGGGCAAAGAAGAACTCTTTTTTTTTGAAGAAGCTAGTCATAAACTACTTGTACGGATTCTTGAGGAGGAACTGTCGAGCTGGTGCTGCAAATTACACCGTCCCTCACATGAACATCATTGAAGTGGGAATGACTTACATGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009507 GO:0009536 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

728

Amino Acids

81.27

Weight (kDa)

7.85

Isoelectric Point (pI)

39.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	1 - 478	4.4e-158	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	490 - 726	2.7e-23	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60160
fragaria_vesca	FvH4_4g34780 FvH4_4g34780 FvH4_4g34780 FvH4_4g34780 FvH4_4g34780 FvH4_4g34780
malus_domestica	MD13G1089800.v1.1 MD16G1090100.v1.1
prunus_persica	Prupe.1G256000_v2.0.a1 Prupe.1G256000_v2.0.a1
pyrus_communis	pycom13g07830 pycom16g07720
rosa_chinensis	RchiOBHm_Chr4g0444121
rosa_laevigata	RLG00000005854
rosa_multiflora	Rmu_sc0012638.1_g000008
rosa_roxburghii	Rroxscaffold_5G00384710
rosa_rugosa	Rorug04G0349800 Rorug04G0349900 Rorug04G0350000 Rorug04G0350100.1 Rorug04G0350200
rosa_samantha	Rh4AG410800 Rh4BG422200 Rh4CG436600 Rh4DG417500
rosa_wichuraiana	Rw4G035290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	5, 1591
AciI	CCGC	4 cut(s)	423, 520, 1289, 2033
AclWI	GGATC	2 cut(s)	595, 1894
AcoI	YGGCCR	1 cut(s)	908
AcsI	RAATTY	2 cut(s)	1056, 1847
AcuI	CTGAAG	3 cut(s)	632, 753, 1040
AfaI	GTAC	7 cut(s)	98, 768, 891, 1361, 1391, 1973, 2093
AfiI	CCNNNNNNNGG	7 cut(s)	458, 1041, 1119, 1452, 1475, 1521, 1966
AhlI	ACTAGT	2 cut(s)	88, 530
AjnI	CCWGG	3 cut(s)	1468, 1737, 1960
AleI	CACNNNNGTG	1 cut(s)	32
Alw21I	GWGCWC	4 cut(s)	1032, 1127, 1275, 1980
Alw26I	GTCTC	1 cut(s)	305
Alw44I	GTGCAC	1 cut(s)	1028
AlwI	GGATC	2 cut(s)	595, 1894
AlwNI	CAGNNNCTG	1 cut(s)	731
AoxI	GGCC	3 cut(s)	433, 908, 1051
ApaLI	GTGCAC	1 cut(s)	1028
ApeKI	GCWGC	5 cut(s)	836, 935, 1321, 1922, 2126
ApoI	RAATTY	2 cut(s)	1056, 1847
AspS9I	GGNCC	1 cut(s)	1051
AsuC2I	CCSGG	2 cut(s)	453, 1589
AsuHPI	GGTGA	4 cut(s)	58, 455, 1204, 1697
AxyI	CCTNAGG	2 cut(s)	632, 1605
BaeGI	GKGCMC	2 cut(s)	8, 1032
BalI	TGGCCA	1 cut(s)	910
BanI	GGYRCC	2 cut(s)	5, 1591
BanII	GRGCYC	2 cut(s)	1275, 1980
BauI	CACGAG	1 cut(s)	497
BbsI	GAAGAC	3 cut(s)	16, 1636, 1962
Bbv12I	GWGCWC	4 cut(s)	1032, 1127, 1275, 1980
BbvCI	CCTCAGC	1 cut(s)	1158
BbvI	GCAGC	5 cut(s)	823, 947, 1308, 1934, 2113
BccI	CCATC	7 cut(s)	358, 383, 1042, 1081, 1121, 1519, 1829
BceAI	ACGGC	1 cut(s)	1915
BcgI	CGANNNNNNTGC	2 cut(s)	1617, 1651
BciT130I	CCWGG	3 cut(s)	1470, 1739, 1962
BcnI	CCSGG	2 cut(s)	453, 1589
BcoDI	GTCTC	1 cut(s)	305
BcuI	ACTAGT	2 cut(s)	88, 530
BfaI	CTAG	7 cut(s)	89, 531, 752, 1185, 1562, 1935, 2075
BfmI	CTRYAG	1 cut(s)	437
BglII	AGATCT	1 cut(s)	1768
BisI	GCNGC	5 cut(s)	837, 936, 1322, 1923, 2127
BlsI	GCNGC	5 cut(s)	838, 937, 1323, 1924, 2128
Bme1390I	CCNGG	5 cut(s)	453, 1470, 1589, 1739, 1962
BmgT120I	GGNCC	1 cut(s)	1051
BmiI	GGNNCC	5 cut(s)	7, 1444, 1593, 1602, 1823
BmrFI	CCNGG	5 cut(s)	453, 1470, 1589, 1739, 1962
BmsI	GCATC	3 cut(s)	1515, 1584, 1854
BoxI	GACNNNNGTC	1 cut(s)	1962
BpiI	GAAGAC	3 cut(s)	16, 1636, 1962
BplI	GAGNNNNNCTC	4 cut(s)	1427, 1459, 1747, 1779
BpmI	CTGGAG	3 cut(s)	264, 1760, 1988
Bpu10I	CCTNAGC	1 cut(s)	1158
BpuEI	CTTGAG	4 cut(s)	238, 1021, 1749, 2122
BpuMI	CCSGG	2 cut(s)	453, 1589
BsaJI	CCNNGG	7 cut(s)	1013, 1419, 1450, 1501, 1882, 1899, 1960
BsaXI	ACNNNNNCTCC	2 cut(s)	2098, 2128
Bsc4I	CCNNNNNNNGG	7 cut(s)	458, 1041, 1119, 1452, 1475, 1521, 1966
Bse1I	ACTGG	3 cut(s)	911, 1790, 1915
Bse21I	CCTNAGG	2 cut(s)	632, 1605
Bse3DI	GCAATG	1 cut(s)	963
BseBI	CCWGG	3 cut(s)	1470, 1739, 1962
BseDI	CCNNGG	7 cut(s)	1013, 1419, 1450, 1501, 1882, 1899, 1960
BseGI	GGATG	6 cut(s)	1010, 1050, 1062, 1506, 1511, 2041
BseLI	CCNNNNNNNGG	7 cut(s)	458, 1041, 1119, 1452, 1475, 1521, 1966
BseMI	GCAATG	1 cut(s)	963
BseMII	CTCAG	5 cut(s)	623, 1149, 1425, 1619, 1995
BseNI	ACTGG	3 cut(s)	911, 1790, 1915
BseRI	GAGGAG	4 cut(s)	335, 803, 1768, 2119
BseSI	GKGCMC	2 cut(s)	8, 1032
BseXI	GCAGC	5 cut(s)	823, 947, 1308, 1934, 2113
BsgI	GTGCAG	1 cut(s)	1941
BshFI	GGCC	3 cut(s)	435, 910, 1053
BshNI	GGYRCC	2 cut(s)	5, 1591
BsiHKAI	GWGCWC	4 cut(s)	1032, 1127, 1275, 1980
BsiSI	CCGG	2 cut(s)	453, 1589
BslFI	GGGAC	4 cut(s)	541, 1468, 1571, 2126
BslI	CCNNNNNNNGG	7 cut(s)	458, 1041, 1119, 1452, 1475, 1521, 1966
BsmAI	GTCTC	1 cut(s)	305
BsmFI	GGGAC	4 cut(s)	541, 1468, 1571, 2126
BsmI	GAATGC	1 cut(s)	638
BsnI	GGCC	3 cut(s)	435, 910, 1053
Bsp1286I	GDGCHC	5 cut(s)	8, 1032, 1127, 1275, 1980
Bsp1407I	TGTACA	2 cut(s)	96, 1359
Bsp143I	GATC	6 cut(s)	326, 587, 748, 1702, 1768, 1886
Bsp19I	CCATGG	1 cut(s)	1419
BspACI	CCGC	4 cut(s)	423, 520, 1289, 2033
BspANI	GGCC	3 cut(s)	435, 910, 1053
BspCNI	CTCAG	5 cut(s)	624, 1150, 1426, 1618, 1994
BspHI	TCATGA	1 cut(s)	1428
BspLI	GGNNCC	5 cut(s)	7, 1444, 1593, 1602, 1823
BspMAI	CTGCAG	1 cut(s)	441
BspPI	GGATC	2 cut(s)	595, 1894
BspT107I	GGYRCC	2 cut(s)	5, 1591
BsrDI	GCAATG	1 cut(s)	963
BsrGI	TGTACA	2 cut(s)	96, 1359
BsrI	ACTGG	3 cut(s)	911, 1790, 1915
BssECI	CCNNGG	7 cut(s)	1013, 1419, 1450, 1501, 1882, 1899, 1960
BssMI	GATC	6 cut(s)	326, 587, 748, 1702, 1768, 1886
BssSI	CACGAG	1 cut(s)	497
BssT1I	CCWWGG	5 cut(s)	1013, 1419, 1450, 1501, 1882
Bst2BI	CACGAG	1 cut(s)	497
Bst2UI	CCWGG	3 cut(s)	1470, 1739, 1962
Bst4CI	ACNGT	5 cut(s)	628, 1459, 1802, 2114, 2140
Bst6I	CTCTTC	2 cut(s)	284, 1605
BstAUI	TGTACA	2 cut(s)	96, 1359
BstC8I	GCNNGC	4 cut(s)	237, 437, 949, 2025
BstDEI	CTNAG	5 cut(s)	632, 1158, 1434, 1605, 1981
BstDSI	CCRYGG	1 cut(s)	1419
BstENI	CCTNNNNNAGG	1 cut(s)	1039
BstF5I	GGATG	6 cut(s)	1010, 1050, 1062, 1506, 1511, 2041
BstKTI	GATC	6 cut(s)	329, 590, 751, 1705, 1771, 1889
BstMAI	GTCTC	1 cut(s)	305
BstMBI	GATC	6 cut(s)	326, 587, 748, 1702, 1768, 1886
BstMWI	GCNNNNNNNGC	6 cut(s)	695, 743, 932, 944, 953, 2126
BstNI	CCWGG	3 cut(s)	1470, 1739, 1962
BstNSI	RCATGY	1 cut(s)	2033
BstPAI	GACNNNNGTC	1 cut(s)	1962
BstSCI	CCNGG	5 cut(s)	451, 1468, 1587, 1737, 1960
BstSFI	CTRYAG	1 cut(s)	437
BstSLI	GKGCMC	2 cut(s)	8, 1032
BstV1I	GCAGC	5 cut(s)	823, 947, 1308, 1934, 2113
BstV2I	GAAGAC	3 cut(s)	16, 1636, 1962
BstX2I	RGATCY	3 cut(s)	587, 1768, 1886
BstXI	CCANNNNNNTGG	1 cut(s)	1189
BstYI	RGATCY	3 cut(s)	587, 1768, 1886
Bsu36I	CCTNAGG	2 cut(s)	632, 1605
BsuRI	GGCC	3 cut(s)	435, 910, 1053
BtgI	CCRYGG	1 cut(s)	1419
BtgZI	GCGATG	2 cut(s)	953, 1848
BtsCI	GGATG	6 cut(s)	1010, 1050, 1062, 1506, 1511, 2041
BtsIMutI	CAGTG	6 cut(s)	27, 188, 420, 436, 624, 1807
Cac8I	GCNNGC	4 cut(s)	237, 437, 949, 2025
CaiI	CAGNNNCTG	1 cut(s)	731
CciI	TCATGA	1 cut(s)	1428
Cfr13I	GGNCC	1 cut(s)	1051
Csp6I	GTAC	7 cut(s)	97, 767, 890, 1360, 1390, 1972, 2092
CspCI	CAANNNNNGTGG	2 cut(s)	1117, 1152
CviQI	GTAC	7 cut(s)	97, 767, 890, 1360, 1390, 1972, 2092
DdeI	CTNAG	5 cut(s)	632, 1158, 1434, 1605, 1981
DpnI	GATC	6 cut(s)	328, 589, 750, 1704, 1770, 1888
DpnII	GATC	6 cut(s)	326, 587, 748, 1702, 1768, 1886
DraI	TTTAAA	1 cut(s)	1852
EaeI	YGGCCR	1 cut(s)	908
Eam1104I	CTCTTC	2 cut(s)	284, 1605
EarI	CTCTTC	2 cut(s)	284, 1605
Ecl136II	GAGCTC	2 cut(s)	1273, 1978
Eco130I	CCWWGG	5 cut(s)	1013, 1419, 1450, 1501, 1882
Eco24I	GRGCYC	2 cut(s)	1275, 1980
Eco32I	GATATC	3 cut(s)	622, 963, 1416
Eco53kI	GAGCTC	2 cut(s)	1273, 1978
Eco57I	CTGAAG	3 cut(s)	632, 753, 1040
Eco81I	CCTNAGG	2 cut(s)	632, 1605
EcoICRI	GAGCTC	2 cut(s)	1273, 1978
EcoNI	CCTNNNNNAGG	1 cut(s)	1039
EcoRII	CCWGG	3 cut(s)	1468, 1737, 1960
EcoRV	GATATC	3 cut(s)	622, 963, 1416
EcoT14I	CCWWGG	5 cut(s)	1013, 1419, 1450, 1501, 1882
EcoT22I	ATGCAT	2 cut(s)	722, 1147
EcoT38I	GRGCYC	2 cut(s)	1275, 1980
ErhI	CCWWGG	5 cut(s)	1013, 1419, 1450, 1501, 1882
FaqI	GGGAC	4 cut(s)	541, 1468, 1571, 2126
FauNDI	CATATG	2 cut(s)	1147, 1653
Fnu4HI	GCNGC	5 cut(s)	837, 936, 1322, 1923, 2127
FokI	GGATG	6 cut(s)	1017, 1049, 1057, 1493, 1498, 2048
FriOI	GRGCYC	2 cut(s)	1275, 1980
Fsp4HI	GCNGC	5 cut(s)	837, 936, 1322, 1923, 2127
FspBI	CTAG	7 cut(s)	89, 531, 752, 1185, 1562, 1935, 2075
GluI	GCNGC	5 cut(s)	837, 936, 1322, 1923, 2127
GsuI	CTGGAG	3 cut(s)	264, 1760, 1988
HaeIII	GGCC	3 cut(s)	435, 910, 1053
HapII	CCGG	2 cut(s)	453, 1589
HindIII	AAGCTT	1 cut(s)	256
HpaII	CCGG	2 cut(s)	453, 1589
HphI	GGTGA	4 cut(s)	58, 455, 1204, 1697
Hpy166II	GTNNAC	2 cut(s)	99, 1030
Hpy188I	TCNGA	8 cut(s)	61, 1122, 1478, 1628, 1695, 1798, 1903, 1951
Hpy8I	GTNNAC	2 cut(s)	99, 1030
HpyAV	CCTTC	5 cut(s)	158, 796, 1541, 1690, 1823
HpyCH4III	ACNGT	5 cut(s)	628, 1459, 1802, 2114, 2140
HpyF10VI	GCNNNNNNNGC	6 cut(s)	695, 743, 932, 944, 953, 2126
HpyF3I	CTNAG	5 cut(s)	632, 1158, 1434, 1605, 1981
Kzo9I	GATC	6 cut(s)	326, 587, 748, 1702, 1768, 1886
LmnI	GCTCC	3 cut(s)	728, 1122, 1448
Lsp1109I	GCAGC	5 cut(s)	823, 947, 1308, 1934, 2113
LweI	GCATC	3 cut(s)	1515, 1584, 1854
MaeI	CTAG	7 cut(s)	89, 531, 752, 1185, 1562, 1935, 2075
MaeIII	GTNAC	3 cut(s)	1177, 1192, 1679
MalI	GATC	6 cut(s)	328, 589, 750, 1704, 1770, 1888
MboI	GATC	6 cut(s)	326, 587, 748, 1702, 1768, 1886
MfeI	CAATTG	2 cut(s)	102, 1075
MflI	RGATCY	3 cut(s)	587, 1768, 1886
MhlI	GDGCHC	5 cut(s)	8, 1032, 1127, 1275, 1980
MlsI	TGGCCA	1 cut(s)	910
MluCI	AATT	9 cut(s)	51, 102, 269, 284, 1056, 1075, 1526, 1847, 2131
MluNI	TGGCCA	1 cut(s)	910
MlyI	GAGTC	1 cut(s)	1872
Mox20I	TGGCCA	1 cut(s)	910
Mph1103I	ATGCAT	2 cut(s)	722, 1147
MscI	TGGCCA	1 cut(s)	910
MseI	TTAA	2 cut(s)	213, 1851
MslI	CAYNNNNRTG	5 cut(s)	32, 193, 976, 2034, 2162
Msp20I	TGGCCA	1 cut(s)	910
MspA1I	CMGCKG	3 cut(s)	239, 425, 520
MspI	CCGG	2 cut(s)	453, 1589
MspR9I	CCNGG	5 cut(s)	453, 1470, 1589, 1739, 1962
MunI	CAATTG	2 cut(s)	102, 1075
Mva1269I	GAATGC	1 cut(s)	638
MvaI	CCWGG	3 cut(s)	1470, 1739, 1962
MwoI	GCNNNNNNNGC	6 cut(s)	695, 743, 932, 944, 953, 2126
NciI	CCSGG	2 cut(s)	453, 1589
NcoI	CCATGG	1 cut(s)	1419
NdeI	CATATG	2 cut(s)	1147, 1653
NdeII	GATC	6 cut(s)	326, 587, 748, 1702, 1768, 1886
NlaIV	GGNNCC	5 cut(s)	7, 1444, 1593, 1602, 1823
NmuCI	GTSAC	1 cut(s)	1192
NsiI	ATGCAT	2 cut(s)	722, 1147
NspI	RCATGY	1 cut(s)	2033
OliI	CACNNNNGTG	1 cut(s)	32
PagI	TCATGA	1 cut(s)	1428
PctI	GAATGC	1 cut(s)	638
PfeI	GAWTC	9 cut(s)	56, 860, 884, 1473, 1793, 1871, 2003, 2010, 2097
PfoI	TCCNGGA	1 cut(s)	451
PkrI	GCNGC	5 cut(s)	838, 937, 1323, 1924, 2128
PleI	GAGTC	1 cut(s)	1872
PpsI	GAGTC	1 cut(s)	1872
PshAI	GACNNNNGTC	1 cut(s)	1962
Psp124BI	GAGCTC	2 cut(s)	1275, 1980
Psp6I	CCWGG	3 cut(s)	1468, 1737, 1960
PspGI	CCWGG	3 cut(s)	1468, 1737, 1960
PspN4I	GGNNCC	5 cut(s)	7, 1444, 1593, 1602, 1823
PspPI	GGNCC	1 cut(s)	1051
PstI	CTGCAG	1 cut(s)	441
PstNI	CAGNNNCTG	1 cut(s)	731
PsuI	RGATCY	3 cut(s)	587, 1768, 1886
PvuII	CAGCTG	1 cut(s)	239
RsaI	GTAC	7 cut(s)	98, 768, 891, 1361, 1391, 1973, 2093
RsaNI	GTAC	7 cut(s)	97, 767, 890, 1360, 1390, 1972, 2092
RseI	CAYNNNNRTG	5 cut(s)	32, 193, 976, 2034, 2162
SacI	GAGCTC	2 cut(s)	1275, 1980
SaqAI	TTAA	2 cut(s)	213, 1851
SatI	GCNGC	5 cut(s)	837, 936, 1322, 1923, 2127
Sau3AI	GATC	6 cut(s)	326, 587, 748, 1702, 1768, 1886
Sau96I	GGNCC	1 cut(s)	1051
SbfI	CCTGCAGG	1 cut(s)	441
SchI	GAGTC	1 cut(s)	1872
ScrFI	CCNGG	5 cut(s)	453, 1470, 1589, 1739, 1962
SdaI	CCTGCAGG	1 cut(s)	441
SduI	GDGCHC	5 cut(s)	8, 1032, 1127, 1275, 1980
SfaNI	GCATC	3 cut(s)	1515, 1584, 1854
SfcI	CTRYAG	1 cut(s)	437
SmiMI	CAYNNNNRTG	5 cut(s)	32, 193, 976, 2034, 2162
SmlI	CTYRAG	4 cut(s)	253, 1036, 1764, 2101
SmoI	CTYRAG	4 cut(s)	253, 1036, 1764, 2101
SpeI	ACTAGT	2 cut(s)	88, 530
Sse8387I	CCTGCAGG	1 cut(s)	441
Sse9I	AATT	9 cut(s)	51, 102, 269, 284, 1056, 1075, 1526, 1847, 2131
SsiI	CCGC	4 cut(s)	423, 520, 1289, 2033
SspI	AATATT	1 cut(s)	876
SspMI	CTAG	7 cut(s)	89, 531, 752, 1185, 1562, 1935, 2075
SstI	GAGCTC	2 cut(s)	1275, 1980
StyD4I	CCNGG	5 cut(s)	451, 1468, 1587, 1737, 1960
StyI	CCWWGG	5 cut(s)	1013, 1419, 1450, 1501, 1882
TaaI	ACNGT	5 cut(s)	628, 1459, 1802, 2114, 2140
TaqI	TCGA	1 cut(s)	2116
TasI	AATT	9 cut(s)	51, 102, 269, 284, 1056, 1075, 1526, 1847, 2131
TatI	WGTACW	2 cut(s)	96, 1359
TfiI	GAWTC	9 cut(s)	56, 860, 884, 1473, 1793, 1871, 2003, 2010, 2097
Tru1I	TTAA	2 cut(s)	213, 1851
Tru9I	TTAA	2 cut(s)	213, 1851
TscAI	CASTG	6 cut(s)	34, 195, 420, 436, 631, 1807
TseFI	GTSAC	1 cut(s)	1192
TseI	GCWGC	5 cut(s)	836, 935, 1321, 1922, 2126
Tsp45I	GTSAC	1 cut(s)	1192
TspDTI	ATGAA	9 cut(s)	258, 863, 966, 1417, 1701, 1806, 1860, 1968, 2165
TspGWI	ACGGA	3 cut(s)	1649, 1804, 2109
TspRI	CASTG	6 cut(s)	34, 195, 420, 436, 631, 1807
VneI	GTGCAC	1 cut(s)	1028
XagI	CCTNNNNNAGG	1 cut(s)	1039
XapI	RAATTY	2 cut(s)	1056, 1847
XceI	RCATGY	1 cut(s)	2033
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1231
XspI	CTAG	7 cut(s)	89, 531, 752, 1185, 1562, 1935, 2075
Zsp2I	ATGCAT	2 cut(s)	722, 1147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.