L-type lectin-domain containing receptor kinase IX.1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0001217.1_g000024 |
| rosa_roxburghii | Rroxscaffold_4G00298830 |
| rosa_rugosa | Rorug05G0567300 |
| rosa_samantha | Rh4CG201600 Rh4DG188400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 66 |
| AgsI | TTSAA | 1 cut(s) | 20 |
| AluBI | AGCT | 1 cut(s) | 16 |
| AluI | AGCT | 1 cut(s) | 16 |
| AoxI | GGCC | 1 cut(s) | 142 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| AspS9I | GGNCC | 1 cut(s) | 142 |
| BbvI | GCAGC | 1 cut(s) | 82 |
| BceAI | ACGGC | 1 cut(s) | 129 |
| BclI | TGATCA | 1 cut(s) | 55 |
| BfaI | CTAG | 1 cut(s) | 126 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| BmgT120I | GGNCC | 1 cut(s) | 142 |
| BsaJI | CCNNGG | 1 cut(s) | 41 |
| Bse3DI | GCAATG | 1 cut(s) | 26 |
| BseDI | CCNNGG | 1 cut(s) | 41 |
| BseMI | GCAATG | 1 cut(s) | 26 |
| BseMII | CTCAG | 2 cut(s) | 104, 119 |
| BseXI | GCAGC | 1 cut(s) | 82 |
| BshFI | GGCC | 1 cut(s) | 144 |
| BslFI | GGGAC | 1 cut(s) | 59 |
| BsmFI | GGGAC | 1 cut(s) | 59 |
| BsnI | GGCC | 1 cut(s) | 144 |
| Bsp143I | GATC | 1 cut(s) | 55 |
| BspANI | GGCC | 1 cut(s) | 144 |
| BspCNI | CTCAG | 2 cut(s) | 103, 118 |
| BsrDI | GCAATG | 1 cut(s) | 26 |
| BssECI | CCNNGG | 1 cut(s) | 41 |
| BssMI | GATC | 1 cut(s) | 55 |
| BssT1I | CCWWGG | 1 cut(s) | 41 |
| Bst4CI | ACNGT | 1 cut(s) | 139 |
| BstDEI | CTNAG | 2 cut(s) | 90, 105 |
| BstKTI | GATC | 1 cut(s) | 58 |
| BstMBI | GATC | 1 cut(s) | 55 |
| BstNSI | RCATGY | 1 cut(s) | 52 |
| BstV1I | GCAGC | 1 cut(s) | 82 |
| BsuRI | GGCC | 1 cut(s) | 144 |
| Cfr13I | GGNCC | 1 cut(s) | 142 |
| Csp6I | GTAC | 1 cut(s) | 65 |
| CviAII | CATG | 2 cut(s) | 49, 53 |
| CviJI | RGCY | 4 cut(s) | 16, 95, 129, 144 |
| CviKI_1 | RGCY | 4 cut(s) | 16, 95, 129, 144 |
| CviQI | GTAC | 1 cut(s) | 65 |
| DdeI | CTNAG | 2 cut(s) | 90, 105 |
| DpnI | GATC | 1 cut(s) | 57 |
| DpnII | GATC | 1 cut(s) | 55 |
| Eco130I | CCWWGG | 1 cut(s) | 41 |
| Eco32I | GATATC | 1 cut(s) | 111 |
| EcoRV | GATATC | 1 cut(s) | 111 |
| EcoT14I | CCWWGG | 1 cut(s) | 41 |
| EcoT22I | ATGCAT | 1 cut(s) | 54 |
| ErhI | CCWWGG | 1 cut(s) | 41 |
| FaeI | CATG | 2 cut(s) | 52, 56 |
| FaiI | YATR | 2 cut(s) | 50, 54 |
| FaqI | GGGAC | 1 cut(s) | 59 |
| FatI | CATG | 2 cut(s) | 48, 52 |
| FbaI | TGATCA | 1 cut(s) | 55 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| FspBI | CTAG | 1 cut(s) | 126 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HaeIII | GGCC | 1 cut(s) | 144 |
| Hin1II | CATG | 2 cut(s) | 52, 56 |
| Hpy188I | TCNGA | 1 cut(s) | 108 |
| HpyCH4III | ACNGT | 1 cut(s) | 139 |
| HpyCH4V | TGCA | 1 cut(s) | 52 |
| HpyF3I | CTNAG | 2 cut(s) | 90, 105 |
| Hsp92II | CATG | 2 cut(s) | 52, 56 |
| Ksp22I | TGATCA | 1 cut(s) | 55 |
| Kzo9I | GATC | 1 cut(s) | 55 |
| LpnPI | CCDG | 3 cut(s) | 45, 77, 84 |
| Lsp1109I | GCAGC | 1 cut(s) | 82 |
| MaeI | CTAG | 1 cut(s) | 126 |
| MaeIII | GTNAC | 1 cut(s) | 133 |
| MalI | GATC | 1 cut(s) | 57 |
| MboI | GATC | 1 cut(s) | 55 |
| MboII | GAAGA | 1 cut(s) | 114 |
| MnlI | CCTC | 1 cut(s) | 112 |
| Mph1103I | ATGCAT | 1 cut(s) | 54 |
| MseI | TTAA | 2 cut(s) | 116, 148 |
| NdeII | GATC | 1 cut(s) | 55 |
| NlaIII | CATG | 2 cut(s) | 52, 56 |
| NsiI | ATGCAT | 1 cut(s) | 54 |
| NspI | RCATGY | 1 cut(s) | 52 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| PspPI | GGNCC | 1 cut(s) | 142 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 66, 98 |
| RsaI | GTAC | 1 cut(s) | 66 |
| RsaNI | GTAC | 1 cut(s) | 65 |
| SaqAI | TTAA | 2 cut(s) | 116, 148 |
| SatI | GCNGC | 1 cut(s) | 96 |
| Sau3AI | GATC | 1 cut(s) | 55 |
| Sau96I | GGNCC | 1 cut(s) | 142 |
| SetI | ASST | 3 cut(s) | 9, 18, 73 |
| SgeI | CNNG | 9 cut(s) | 29, 44, 54, 61, 65, 83, 104, 138, 143 |
| SspMI | CTAG | 1 cut(s) | 126 |
| StyI | CCWWGG | 1 cut(s) | 41 |
| TaaI | ACNGT | 1 cut(s) | 139 |
| TatI | WGTACW | 1 cut(s) | 64 |
| Tru1I | TTAA | 2 cut(s) | 116, 148 |
| Tru9I | TTAA | 2 cut(s) | 116, 148 |
| TseI | GCWGC | 1 cut(s) | 95 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XceI | RCATGY | 1 cut(s) | 52 |
| XspI | CTAG | 1 cut(s) | 126 |
| Zsp2I | ATGCAT | 1 cut(s) | 54 |