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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G097700_v2.0.a1 |
| pyrus_communis | pycom16g23040 |
| rosa_chinensis | RchiOBHm_Chr4g0404971 |
| rosa_roxburghii | Rroxscaffold_5G00349100 |
| rosa_rugosa | Rorug04G0050600 |
| rosa_samantha | Rh4AG126300 Rh4BG120500 Rh4CG134500 Rh4DG120800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 137 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 105 |
| AgsI | TTSAA | 2 cut(s) | 18, 209 |
| AluBI | AGCT | 3 cut(s) | 52, 58, 121 |
| AluI | AGCT | 3 cut(s) | 52, 58, 121 |
| AlwI | GGATC | 1 cut(s) | 137 |
| Ama87I | CYCGRG | 1 cut(s) | 137 |
| AsuC2I | CCSGG | 2 cut(s) | 138, 139 |
| AvaI | CYCGRG | 1 cut(s) | 137 |
| BccI | CCATC | 1 cut(s) | 109 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 68, 102 |
| BcnI | CCSGG | 2 cut(s) | 138, 139 |
| Bme1390I | CCNGG | 2 cut(s) | 138, 139 |
| BmeT110I | CYCGRG | 1 cut(s) | 137 |
| BmrFI | CCNGG | 2 cut(s) | 138, 139 |
| BpuMI | CCSGG | 2 cut(s) | 138, 139 |
| BsaBI | GATNNNNATC | 1 cut(s) | 235 |
| BsaJI | CCNNGG | 4 cut(s) | 23, 136, 137, 178 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 105 |
| Bse1I | ACTGG | 1 cut(s) | 87 |
| Bse8I | GATNNNNATC | 1 cut(s) | 235 |
| BseDI | CCNNGG | 4 cut(s) | 23, 136, 137, 178 |
| BseGI | GGATG | 1 cut(s) | 132 |
| BseJI | GATNNNNATC | 1 cut(s) | 235 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 105 |
| BseMII | CTCAG | 1 cut(s) | 241 |
| BseNI | ACTGG | 1 cut(s) | 87 |
| BseYI | CCCAGC | 1 cut(s) | 121 |
| BsiHKCI | CYCGRG | 1 cut(s) | 137 |
| BsiSI | CCGG | 1 cut(s) | 138 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 105 |
| BsmI | GAATGC | 1 cut(s) | 226 |
| BsoBI | CYCGRG | 1 cut(s) | 137 |
| Bsp143I | GATC | 1 cut(s) | 129 |
| Bsp19I | CCATGG | 1 cut(s) | 23 |
| BspCNI | CTCAG | 1 cut(s) | 240 |
| BspPI | GGATC | 1 cut(s) | 137 |
| BsrI | ACTGG | 1 cut(s) | 87 |
| BssECI | CCNNGG | 4 cut(s) | 23, 136, 137, 178 |
| BssMI | GATC | 1 cut(s) | 129 |
| BssT1I | CCWWGG | 2 cut(s) | 23, 178 |
| Bst6I | CTCTTC | 1 cut(s) | 38 |
| BstDEI | CTNAG | 1 cut(s) | 227 |
| BstDSI | CCRYGG | 1 cut(s) | 23 |
| BstF5I | GGATG | 1 cut(s) | 132 |
| BstKTI | GATC | 1 cut(s) | 132 |
| BstMBI | GATC | 1 cut(s) | 129 |
| BstSCI | CCNGG | 2 cut(s) | 136, 137 |
| BtgI | CCRYGG | 1 cut(s) | 23 |
| BtsCI | GGATG | 1 cut(s) | 132 |
| Cfr9I | CCCGGG | 1 cut(s) | 137 |
| CviAII | CATG | 1 cut(s) | 24 |
| CviJI | RGCY | 3 cut(s) | 52, 58, 121 |
| CviKI_1 | RGCY | 3 cut(s) | 52, 58, 121 |
| DdeI | CTNAG | 1 cut(s) | 227 |
| DpnI | GATC | 1 cut(s) | 131 |
| DpnII | GATC | 1 cut(s) | 129 |
| Eam1104I | CTCTTC | 1 cut(s) | 38 |
| EarI | CTCTTC | 1 cut(s) | 38 |
| Eco130I | CCWWGG | 2 cut(s) | 23, 178 |
| Eco88I | CYCGRG | 1 cut(s) | 137 |
| EcoT14I | CCWWGG | 2 cut(s) | 23, 178 |
| ErhI | CCWWGG | 2 cut(s) | 23, 178 |
| FaeI | CATG | 1 cut(s) | 27 |
| FaiI | YATR | 3 cut(s) | 25, 101, 247 |
| FatI | CATG | 1 cut(s) | 23 |
| FokI | GGATG | 1 cut(s) | 119 |
| GsaI | CCCAGC | 1 cut(s) | 125 |
| HapII | CCGG | 1 cut(s) | 138 |
| Hin1II | CATG | 1 cut(s) | 27 |
| HincII | GTYRAC | 1 cut(s) | 151 |
| HindII | GTYRAC | 1 cut(s) | 151 |
| HinfI | GANTC | 2 cut(s) | 109, 252 |
| HpaII | CCGG | 1 cut(s) | 138 |
| Hpy166II | GTNNAC | 1 cut(s) | 151 |
| Hpy188I | TCNGA | 3 cut(s) | 79, 114, 230 |
| Hpy8I | GTNNAC | 1 cut(s) | 151 |
| HpyAV | CCTTC | 1 cut(s) | 120 |
| HpyCH4V | TGCA | 1 cut(s) | 144 |
| HpyF3I | CTNAG | 1 cut(s) | 227 |
| Hsp92II | CATG | 1 cut(s) | 27 |
| Kzo9I | GATC | 1 cut(s) | 129 |
| LmnI | GCTCC | 1 cut(s) | 118 |
| LpnPI | CCDG | 3 cut(s) | 68, 107, 151 |
| MalI | GATC | 1 cut(s) | 131 |
| MboI | GATC | 1 cut(s) | 129 |
| MboII | GAAGA | 2 cut(s) | 52, 55 |
| MluCI | AATT | 4 cut(s) | 18, 30, 183, 190 |
| MlyI | GAGTC | 1 cut(s) | 118 |
| MseI | TTAA | 1 cut(s) | 33 |
| MspI | CCGG | 1 cut(s) | 138 |
| MspR9I | CCNGG | 2 cut(s) | 138, 139 |
| Mva1269I | GAATGC | 1 cut(s) | 226 |
| NciI | CCSGG | 2 cut(s) | 138, 139 |
| NcoI | CCATGG | 1 cut(s) | 23 |
| NdeII | GATC | 1 cut(s) | 129 |
| NlaIII | CATG | 1 cut(s) | 27 |
| PctI | GAATGC | 1 cut(s) | 226 |
| PleI | GAGTC | 1 cut(s) | 117 |
| PpsI | GAGTC | 1 cut(s) | 117 |
| PspFI | CCCAGC | 1 cut(s) | 121 |
| SaqAI | TTAA | 1 cut(s) | 33 |
| Sau3AI | GATC | 1 cut(s) | 129 |
| SchI | GAGTC | 1 cut(s) | 118 |
| ScrFI | CCNGG | 2 cut(s) | 138, 139 |
| SetI | ASST | 5 cut(s) | 54, 60, 123, 173, 237 |
| SmaI | CCCGGG | 1 cut(s) | 139 |
| Sse9I | AATT | 4 cut(s) | 18, 30, 183, 190 |
| StyD4I | CCNGG | 2 cut(s) | 136, 137 |
| StyI | CCWWGG | 2 cut(s) | 23, 178 |
| TaqI | TCGA | 1 cut(s) | 38 |
| TasI | AATT | 4 cut(s) | 18, 30, 183, 190 |
| Tru1I | TTAA | 1 cut(s) | 33 |
| Tru9I | TTAA | 1 cut(s) | 33 |
| TspDTI | ATGAA | 1 cut(s) | 234 |
| TspMI | CCCGGG | 1 cut(s) | 137 |
| XmaI | CCCGGG | 1 cut(s) | 137 |