Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0009120

Physical Location & Seq

Genomic Coordinates Reverse (-)

43646744 .. 43655779

Gene Structure 9036 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG230400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGGACGTCCCCAAGGATCAAATCGCTACTCTTATGGAGCATGGCCTCTACACCTCGGCTCAAATGCTCGGTTGCTTTCTTGTTTCTTCACCAGCTGCTAATGCCGAAGTCACTCCGCACCTCAAAGCTGATAGCCTGGTACTTCTTGGAGATTCGCTGTTTCGGGAGAGGGAGTTTCGCAGAGCAATTCATACATACAAGCAAGCATTGCAAGTTTGCAAGCTTATTTCCAAAACAAATCCAACATCGTCGAGAAGTTCATTGGTCTCAAATCGGTCATCTTCTCCAAATGTTTTTAACGCTTCAGGAATTAATGAGAATGAGGTGAAGTTCAAAATTGCGTCTTGTCAATGTGCGCTTAGTGAGTACGGAGCAGCCCTTGCTGAGATGGATAATATTCCAAGCAAAATGAGAAACTTGCAGATGAATTTGTTGATGGGAAAACTCTATCGTTATTCTAGACAGAATCGTTCTGCTGTTTCTTGTTTCAAAGAATGTCTAAGGTCTTGCCCTTATGTCTTCGAGGCTATCATAGCTTTGGCAGAATTAGGAGTTTCTGCTAAAGACATTATTTCCTTGATTCCGCAGACTCCAAATAGAAGTGGGAGGGCATCATTTGATCATTTGGACTCGAGTCGTTGGCTGCCACGCTATGTTGAGGCCCAGTGTTCCGTTGCTTCTAATGATTACAAAGGTGGTCTGGAACTCTTTACAGATCTTTTGCAACGTTTCCCGAACAATTTACACTTGTTACTTGAAATTGCAAAGGTTGAAGCTATTGTTGGGAAGAATGATGAGGCTATAATGAATTTTGATAAGGCTCGATTAATTGATCCATATGTTGTGACATATATGGATGAGTATGCAATGCTTCTGAAGATAAAGTCTGACTTTTCAAAGCTAAACAAATTAGTGCATGATTTGTTGATCACTGATTCTACGAGGCCAGAAGTTTTTGTGGCCTTATCTGTGCTTTGGGAAAGAAAAGATGAGAGAGGAGCTTTATCTTATGCTGAGAAGAGCATACGTATCGACGAGAGGCATATACCAGGTTATATAATGAAGGGTAACCTGCTGTTATCAATGAAGCGAGCAGAAGCAGCTGTAAGTGCCTTCAGGGTAGCTCAAGAGTTGAGACCTGATATTCGTTCATATCAAGGTTTGGTTCAGTCTTATCTAGCTCTCTCTAAAATTAAAGAGGCTTTATATGCTTCAAGGGAGGCTATGAAGGCCATGCCTCAATCTGCGAAGGCTCTAAAATTAGTAGGGGATGTACATGCGAGTAACTCTGGTGGCAGGGAGAAGGCAAAAAAGTTCTATGAGTCAGCCCTTAGGCTAGAACCTGGTTATCTCGGAGCTGCATTAGCTCTGGCTGAGCTCCATGTTATTGAAGGCCGTAACGTGGATGCTGTGTCTCTGCTAGAGCGATATCTCAAGGATTGGGCCGATGACTCTCTACATGTCAAGCTCGCTCAAGTATTTGCTGCAACAAATATGCTGCAAGATGCATTATCACATTTTCAAGCTGCATTGAGGCGCAAGAAGATAGCATTCAAAGATAGAGAGGGAGCAGGAGATCATATTGACCGGTCTGCTCGGTCTGTCCTTATTGGGGCTGGCAGTTTGTTGAGGGTTGGGCACCAAGCACTTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

TPR_16 TPR_19 TPR_7 TPR_8

Protein Analysis

551

Amino Acids

61.31

Weight (kDa)

9.06

Isoelectric Point (pI)

40.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39090 AT2G39090
fragaria_vesca	FvH4_4g17530 FvH4_4g17530 FvH4_4g17530
malus_domestica	MD13G1171800.v1.1 MD16G1173300.v1.1
prunus_persica	Prupe.1G140200_v2.0.a1 Prupe.1G140200_v2.0.a1 Prupe.1G140200_v2.0.a1
pyrus_communis	pycom16g14530
rosa_chinensis	RchiOBHm_Chr4g0421441
rosa_laevigata	RLG00000007684
rosa_multiflora	Rmu_sc0001962.1_g000013
rosa_roxburghii	Rroxscaffold_5G00363710
rosa_rugosa	Rorug04G0171200 Rorug04G0171200
rosa_samantha	Rh4AG231900 Rh4BG234800 Rh4CG246400 Rh4DG230400
rosa_wichuraiana	Rw4G020220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	9
Acc36I	ACCTGC	1 cut(s)	1080
AccB1I	GGYRCC	1 cut(s)	1638
AciI	CCGC	2 cut(s)	116, 584
AclI	AACGTT	1 cut(s)	727
AclWI	GGATC	2 cut(s)	24, 827
AcsI	RAATTY	2 cut(s)	427, 808
AcuI	CTGAAG	3 cut(s)	288, 896, 1099
AcyI	GRCGYC	1 cut(s)	6
AfaI	GTAC	3 cut(s)	141, 368, 1275
AfiI	CCNNNNNNNGG	2 cut(s)	1402, 1612
AflIII	ACRYGT	1 cut(s)	1459
AgeI	ACCGGT	1 cut(s)	1587
AgsI	TTSAA	9 cut(s)	334, 490, 758, 773, 897, 1215, 1391, 1523, 1555
AjnI	CCWGG	3 cut(s)	135, 1048, 1342
AjuI	GAANNNNNNNTTGG	2 cut(s)	765, 797
Alw21I	GWGCWC	1 cut(s)	1380
Alw26I	GTCTC	3 cut(s)	271, 1129, 1419
AlwI	GGATC	2 cut(s)	24, 827
Ama87I	CYCGRG	1 cut(s)	631
AoxI	GGCC	7 cut(s)	43, 660, 944, 960, 1230, 1393, 1443
ApeKI	GCWGC	8 cut(s)	95, 374, 643, 1100, 1358, 1484, 1498, 1526
ApoI	RAATTY	2 cut(s)	427, 808
ArsI	GACNNNNNNTTYG	2 cut(s)	1128, 1160
AseI	ATTAAT	2 cut(s)	312, 827
AsiGI	ACCGGT	1 cut(s)	1587
AspLEI	GCGC	2 cut(s)	358, 1539
AspS9I	GGNCC	2 cut(s)	661, 1443
AsuHPI	GGTGA	2 cut(s)	81, 337
AvaI	CYCGRG	1 cut(s)	631
AxyI	CCTNAGG	1 cut(s)	1331
BaeGI	GKGCMC	1 cut(s)	1641
BanI	GGYRCC	1 cut(s)	1638
BanII	GRGCYC	1 cut(s)	1380
BbsI	GAAGAC	1 cut(s)	511
Bbv12I	GWGCWC	1 cut(s)	1380
BbvI	GCAGC	8 cut(s)	82, 386, 630, 1112, 1345, 1471, 1485, 1513
BccI	CCATC	2 cut(s)	382, 430
BceAI	ACGGC	1 cut(s)	1380
BcgI	CGANNNNNNTGC	2 cut(s)	1012, 1046
BciT130I	CCWGG	3 cut(s)	137, 1050, 1344
BclI	TGATCA	2 cut(s)	619, 927
BcoDI	GTCTC	3 cut(s)	271, 1129, 1419
BfaI	CTAG	4 cut(s)	459, 1178, 1337, 1421
BfuAI	ACCTGC	1 cut(s)	1080
BglII	AGATCT	1 cut(s)	715
BisI	GCNGC	8 cut(s)	96, 375, 644, 1101, 1359, 1485, 1499, 1527
BlpI	GCTNAGC	1 cut(s)	1374
BlsI	GCNGC	8 cut(s)	97, 376, 645, 1102, 1360, 1486, 1500, 1528
Bme1390I	CCNGG	3 cut(s)	137, 1050, 1344
BmeT110I	CYCGRG	1 cut(s)	631
BmgT120I	GGNCC	2 cut(s)	661, 1443
BmiI	GGNNCC	1 cut(s)	1640
BmrFI	CCNGG	3 cut(s)	137, 1050, 1344
BmrI	ACTGGG	1 cut(s)	658
BmsI	GCATC	3 cut(s)	620, 1396, 1495
BmuI	ACTGGG	1 cut(s)	658
BoxI	GACNNNNGTC	1 cut(s)	633
BpiI	GAAGAC	1 cut(s)	511
Bpu1102I	GCTNAGC	1 cut(s)	1374
BpuEI	CTTGAG	3 cut(s)	1110, 1418, 1458
BsaAI	YACGTR	1 cut(s)	1028
BsaHI	GRCGYC	1 cut(s)	6
BsaI	GGTCTC	2 cut(s)	271, 1129
BsaJI	CCNNGG	2 cut(s)	12, 54
BsaWI	WCCGGW	1 cut(s)	1587
BsaXI	ACNNNNNCTCC	2 cut(s)	158, 188
Bsc4I	CCNNNNNNNGG	2 cut(s)	1402, 1612
Bse118I	RCCGGY	1 cut(s)	1587
Bse1I	ACTGG	1 cut(s)	664
Bse21I	CCTNAGG	1 cut(s)	1331
Bse3DI	GCAATG	2 cut(s)	206, 873
BseBI	CCWGG	3 cut(s)	137, 1050, 1344
BseDI	CCNNGG	2 cut(s)	12, 54
BseGI	GGATG	3 cut(s)	862, 1276, 1411
BseLI	CCNNNNNNNGG	2 cut(s)	1402, 1612
BseMI	GCAATG	2 cut(s)	206, 873
BseMII	CTCAG	3 cut(s)	375, 1005, 1365
BseNI	ACTGG	1 cut(s)	664
BseRI	GAGGAG	1 cut(s)	1011
BseSI	GKGCMC	1 cut(s)	1641
BseXI	GCAGC	8 cut(s)	82, 386, 630, 1112, 1345, 1471, 1485, 1513
BshFI	GGCC	7 cut(s)	45, 662, 946, 962, 1232, 1395, 1445
BshNI	GGYRCC	1 cut(s)	1638
BshTI	ACCGGT	1 cut(s)	1587
BsiHKAI	GWGCWC	1 cut(s)	1380
BsiHKCI	CYCGRG	1 cut(s)	631
BsiSI	CCGG	1 cut(s)	1588
BslI	CCNNNNNNNGG	2 cut(s)	1402, 1612
BsmAI	GTCTC	3 cut(s)	271, 1129, 1419
BsmI	GAATGC	1 cut(s)	1550
BsnI	GGCC	7 cut(s)	45, 662, 946, 962, 1232, 1395, 1445
Bso31I	GGTCTC	2 cut(s)	271, 1129
BsoBI	CYCGRG	1 cut(s)	631
Bsp1286I	GDGCHC	2 cut(s)	1380, 1641
Bsp1407I	TGTACA	1 cut(s)	1273
Bsp143I	GATC	6 cut(s)	16, 619, 715, 832, 927, 1576
Bsp1720I	GCTNAGC	1 cut(s)	1374
BspACI	CCGC	2 cut(s)	116, 584
BspANI	GGCC	7 cut(s)	45, 662, 946, 962, 1232, 1395, 1445
BspCNI	CTCAG	3 cut(s)	376, 1006, 1366
BspLI	GGNNCC	1 cut(s)	1640
BspMI	ACCTGC	1 cut(s)	1080
BspPI	GGATC	2 cut(s)	24, 827
BspQI	GCTCTTC	1 cut(s)	1013
BspT107I	GGYRCC	1 cut(s)	1638
BspTNI	GGTCTC	2 cut(s)	271, 1129
BsrDI	GCAATG	2 cut(s)	206, 873
BsrFI	RCCGGY	1 cut(s)	1587
BsrGI	TGTACA	1 cut(s)	1273
BsrI	ACTGG	1 cut(s)	664
BssAI	RCCGGY	1 cut(s)	1587
BssECI	CCNNGG	2 cut(s)	12, 54
BssMI	GATC	6 cut(s)	16, 619, 715, 832, 927, 1576
BssNI	GRCGYC	1 cut(s)	6
BssT1I	CCWWGG	1 cut(s)	12
Bst2UI	CCWGG	3 cut(s)	137, 1050, 1344
Bst6I	CTCTTC	1 cut(s)	1013
BstACI	GRCGYC	1 cut(s)	6
BstAPI	GCANNNNNTGC	2 cut(s)	208, 380
BstAUI	TGTACA	1 cut(s)	1273
BstBAI	YACGTR	1 cut(s)	1028
BstC8I	GCNNGC	5 cut(s)	204, 221, 1092, 1470, 1618
BstDEI	CTNAG	6 cut(s)	359, 384, 500, 1014, 1331, 1374
BstEII	GGTNACC	1 cut(s)	1067
BstF5I	GGATG	3 cut(s)	862, 1276, 1411
BstHHI	GCGC	2 cut(s)	358, 1539
BstKTI	GATC	6 cut(s)	19, 622, 718, 835, 930, 1579
BstMAI	GTCTC	3 cut(s)	271, 1129, 1419
BstMBI	GATC	6 cut(s)	16, 619, 715, 832, 927, 1576
BstMWI	GCNNNNNNNGC	9 cut(s)	101, 208, 380, 533, 1100, 1109, 1208, 1229, 1364
BstNI	CCWGG	3 cut(s)	137, 1050, 1344
BstNSI	RCATGY	2 cut(s)	1280, 1463
BstPAI	GACNNNNGTC	1 cut(s)	633
BstPI	GGTNACC	1 cut(s)	1067
BstSCI	CCNGG	3 cut(s)	135, 1048, 1342
BstSLI	GKGCMC	1 cut(s)	1641
BstSNI	TACGTA	1 cut(s)	1028
BstV1I	GCAGC	8 cut(s)	82, 386, 630, 1112, 1345, 1471, 1485, 1513
BstV2I	GAAGAC	1 cut(s)	511
BstX2I	RGATCY	1 cut(s)	715
BstYI	RGATCY	1 cut(s)	715
Bsu36I	CCTNAGG	1 cut(s)	1331
BsuRI	GGCC	7 cut(s)	45, 662, 946, 962, 1232, 1395, 1445
BtsCI	GGATG	3 cut(s)	862, 1276, 1411
BtsIMutI	CAGTG	2 cut(s)	671, 930
BveI	ACCTGC	1 cut(s)	1080
Cac8I	GCNNGC	5 cut(s)	204, 221, 1092, 1470, 1618
CfoI	GCGC	2 cut(s)	358, 1539
Cfr10I	RCCGGY	1 cut(s)	1587
Cfr13I	GGNCC	2 cut(s)	661, 1443
CseI	GACGC	1 cut(s)	330
CsiI	ACCWGGT	2 cut(s)	1048, 1342
Csp6I	GTAC	3 cut(s)	140, 367, 1274
CspAI	ACCGGT	1 cut(s)	1587
CviAII	CATG	6 cut(s)	41, 917, 1234, 1277, 1382, 1460
CviQI	GTAC	3 cut(s)	140, 367, 1274
DdeI	CTNAG	6 cut(s)	359, 384, 500, 1014, 1331, 1374
DpnI	GATC	6 cut(s)	18, 621, 717, 834, 929, 1578
DpnII	GATC	6 cut(s)	16, 619, 715, 832, 927, 1576
Eam1104I	CTCTTC	1 cut(s)	1013
EarI	CTCTTC	1 cut(s)	1013
Ecl136II	GAGCTC	1 cut(s)	1378
Eco105I	TACGTA	1 cut(s)	1028
Eco130I	CCWWGG	1 cut(s)	12
Eco24I	GRGCYC	1 cut(s)	1380
Eco31I	GGTCTC	2 cut(s)	271, 1129
Eco32I	GATATC	1 cut(s)	1430
Eco53kI	GAGCTC	1 cut(s)	1378
Eco57I	CTGAAG	3 cut(s)	288, 896, 1099
Eco81I	CCTNAGG	1 cut(s)	1331
Eco88I	CYCGRG	1 cut(s)	631
Eco91I	GGTNACC	1 cut(s)	1067
EcoICRI	GAGCTC	1 cut(s)	1378
EcoO65I	GGTNACC	1 cut(s)	1067
EcoRII	CCWGG	3 cut(s)	135, 1048, 1342
EcoRV	GATATC	1 cut(s)	1430
EcoT14I	CCWWGG	1 cut(s)	12
EcoT22I	ATGCAT	1 cut(s)	1510
EcoT38I	GRGCYC	1 cut(s)	1380
ErhI	CCWWGG	1 cut(s)	12
FaeI	CATG	6 cut(s)	44, 920, 1237, 1280, 1385, 1463
FalI	AAGNNNNNCTT	2 cut(s)	875, 907
FatI	CATG	6 cut(s)	40, 916, 1233, 1276, 1381, 1459
FauNDI	CATATG	1 cut(s)	838
FbaI	TGATCA	2 cut(s)	619, 927
Fnu4HI	GCNGC	8 cut(s)	96, 375, 644, 1101, 1359, 1485, 1499, 1527
FokI	GGATG	3 cut(s)	869, 1283, 1418
FriOI	GRGCYC	1 cut(s)	1380
Fsp4HI	GCNGC	8 cut(s)	96, 375, 644, 1101, 1359, 1485, 1499, 1527
FspBI	CTAG	4 cut(s)	459, 1178, 1337, 1421
GlaI	GCGC	2 cut(s)	357, 1538
GluI	GCNGC	8 cut(s)	96, 375, 644, 1101, 1359, 1485, 1499, 1527
HaeIII	GGCC	7 cut(s)	45, 662, 946, 962, 1232, 1395, 1445
HapII	CCGG	1 cut(s)	1588
HgaI	GACGC	1 cut(s)	330
HhaI	GCGC	2 cut(s)	358, 1539
Hin1I	GRCGYC	1 cut(s)	6
Hin1II	CATG	6 cut(s)	44, 920, 1237, 1280, 1385, 1463
Hin6I	GCGC	2 cut(s)	356, 1537
HinP1I	GCGC	2 cut(s)	356, 1537
HindIII	AAGCTT	1 cut(s)	221
HinfI	GANTC	9 cut(s)	152, 466, 580, 589, 629, 634, 935, 1322, 1451
HpaII	CCGG	1 cut(s)	1588
HphI	GGTGA	2 cut(s)	81, 337
Hpy188I	TCNGA	3 cut(s)	876, 889, 1355
Hpy188III	TCNNGA	7 cut(s)	164, 252, 306, 459, 701, 733, 1127
Hpy99I	CGWCG	2 cut(s)	253, 1037
HpyAV	CCTTC	6 cut(s)	1057, 1123, 1222, 1243, 1297, 1385
HpyCH4IV	ACGT	4 cut(s)	6, 727, 1027, 1401
HpyF10VI	GCNNNNNNNGC	9 cut(s)	101, 208, 380, 533, 1100, 1109, 1208, 1229, 1364
HpyF3I	CTNAG	6 cut(s)	359, 384, 500, 1014, 1331, 1374
HpySE526I	ACGT	4 cut(s)	6, 727, 1027, 1401
Hsp92I	GRCGYC	1 cut(s)	6
Hsp92II	CATG	6 cut(s)	44, 920, 1237, 1280, 1385, 1463
HspAI	GCGC	2 cut(s)	356, 1537
Ksp22I	TGATCA	2 cut(s)	619, 927
Kzo9I	GATC	6 cut(s)	16, 619, 715, 832, 927, 1576
LguI	GCTCTTC	1 cut(s)	1013
LmnI	GCTCC	6 cut(s)	37, 371, 998, 1355, 1383, 1568
Lsp1109I	GCAGC	8 cut(s)	82, 386, 630, 1112, 1345, 1471, 1485, 1513
LweI	GCATC	3 cut(s)	620, 1396, 1495
MabI	ACCWGGT	2 cut(s)	1048, 1342
MaeI	CTAG	4 cut(s)	459, 1178, 1337, 1421
MaeII	ACGT	4 cut(s)	6, 727, 1027, 1401
MaeIII	GTNAC	6 cut(s)	109, 750, 844, 1067, 1283, 1397
MalI	GATC	6 cut(s)	18, 621, 717, 834, 929, 1578
MboI	GATC	6 cut(s)	16, 619, 715, 832, 927, 1576
MboII	GAAGA	7 cut(s)	78, 273, 511, 799, 889, 1030, 1555
MflI	RGATCY	1 cut(s)	715
MhlI	GDGCHC	2 cut(s)	1380, 1641
MlyI	GAGTC	5 cut(s)	583, 623, 643, 1331, 1445
MmeI	TCCRAC	1 cut(s)	266
Mph1103I	ATGCAT	1 cut(s)	1510
MseI	TTAA	4 cut(s)	297, 312, 827, 1194
MspA1I	CMGCKG	2 cut(s)	95, 1103
MspI	CCGG	1 cut(s)	1588
MspR9I	CCNGG	3 cut(s)	137, 1050, 1344
Mva1269I	GAATGC	1 cut(s)	1550
MvaI	CCWGG	3 cut(s)	137, 1050, 1344
MwoI	GCNNNNNNNGC	9 cut(s)	101, 208, 380, 533, 1100, 1109, 1208, 1229, 1364
NdeI	CATATG	1 cut(s)	838
NdeII	GATC	6 cut(s)	16, 619, 715, 832, 927, 1576
NlaIII	CATG	6 cut(s)	44, 920, 1237, 1280, 1385, 1463
NlaIV	GGNNCC	1 cut(s)	1640
NmeAIII	GCCGAG	1 cut(s)	35
NmuCI	GTSAC	2 cut(s)	109, 844
NsiI	ATGCAT	1 cut(s)	1510
NspI	RCATGY	2 cut(s)	1280, 1463
PaeR7I	CTCGAG	1 cut(s)	631
PciI	ACATGT	1 cut(s)	1459
PciSI	GCTCTTC	1 cut(s)	1013
PctI	GAATGC	1 cut(s)	1550
PfeI	GAWTC	4 cut(s)	152, 466, 580, 935
PinAI	ACCGGT	1 cut(s)	1587
PkrI	GCNGC	8 cut(s)	97, 376, 645, 1102, 1360, 1486, 1500, 1528
PleI	GAGTC	5 cut(s)	583, 623, 642, 1330, 1445
PpsI	GAGTC	5 cut(s)	583, 623, 642, 1330, 1445
Ppu21I	YACGTR	1 cut(s)	1028
PscI	ACATGT	1 cut(s)	1459
PshAI	GACNNNNGTC	1 cut(s)	633
PshBI	ATTAAT	2 cut(s)	312, 827
Psp124BI	GAGCTC	1 cut(s)	1380
Psp1406I	AACGTT	1 cut(s)	727
Psp6I	CCWGG	3 cut(s)	135, 1048, 1342
PspEI	GGTNACC	1 cut(s)	1067
PspGI	CCWGG	3 cut(s)	135, 1048, 1342
PspN4I	GGNNCC	1 cut(s)	1640
PspPI	GGNCC	2 cut(s)	661, 1443
PspXI	VCTCGAGB	1 cut(s)	631
PsuI	RGATCY	1 cut(s)	715
PvuII	CAGCTG	2 cut(s)	95, 1103
RsaI	GTAC	3 cut(s)	141, 368, 1275
RsaNI	GTAC	3 cut(s)	140, 367, 1274
SacI	GAGCTC	1 cut(s)	1380
SapI	GCTCTTC	1 cut(s)	1013
SaqAI	TTAA	4 cut(s)	297, 312, 827, 1194
SatI	GCNGC	8 cut(s)	96, 375, 644, 1101, 1359, 1485, 1499, 1527
Sau3AI	GATC	6 cut(s)	16, 619, 715, 832, 927, 1576
Sau96I	GGNCC	2 cut(s)	661, 1443
SchI	GAGTC	5 cut(s)	583, 623, 643, 1331, 1445
ScrFI	CCNGG	3 cut(s)	137, 1050, 1344
SduI	GDGCHC	2 cut(s)	1380, 1641
SexAI	ACCWGGT	2 cut(s)	1048, 1342
SfaNI	GCATC	3 cut(s)	620, 1396, 1495
Sfr274I	CTCGAG	1 cut(s)	631
SlaI	CTCGAG	1 cut(s)	631
SmlI	CTYRAG	4 cut(s)	631, 1125, 1433, 1473
SmoI	CTYRAG	4 cut(s)	631, 1125, 1433, 1473
SnaBI	TACGTA	1 cut(s)	1028
SsiI	CCGC	2 cut(s)	116, 584
SspI	AATATT	1 cut(s)	397
SspMI	CTAG	4 cut(s)	459, 1178, 1337, 1421
SstI	GAGCTC	1 cut(s)	1380
StyD4I	CCNGG	3 cut(s)	135, 1048, 1342
StyI	CCWWGG	1 cut(s)	12
TaiI	ACGT	4 cut(s)	9, 730, 1030, 1404
TaqI	TCGA	5 cut(s)	251, 522, 632, 823, 1032
TaqII	GACCGA	2 cut(s)	264, 1587
TatI	WGTACW	1 cut(s)	1273
TfiI	GAWTC	4 cut(s)	152, 466, 580, 935
Tru1I	TTAA	4 cut(s)	297, 312, 827, 1194
Tru9I	TTAA	4 cut(s)	297, 312, 827, 1194
TscAI	CASTG	2 cut(s)	671, 937
TseFI	GTSAC	2 cut(s)	109, 844
TseI	GCWGC	8 cut(s)	95, 374, 643, 1100, 1358, 1484, 1498, 1526
Tsp45I	GTSAC	2 cut(s)	109, 844
TspDTI	ATGAA	8 cut(s)	179, 249, 440, 821, 1076, 1100, 1140, 1241
TspGWI	ACGGA	2 cut(s)	384, 661
TspRI	CASTG	2 cut(s)	671, 937
VspI	ATTAAT	2 cut(s)	312, 827
XapI	RAATTY	2 cut(s)	427, 808
XbaI	TCTAGA	1 cut(s)	458
XceI	RCATGY	2 cut(s)	1280, 1463
XhoI	CTCGAG	1 cut(s)	631
XspI	CTAG	4 cut(s)	459, 1178, 1337, 1421
ZraI	GACGTC	1 cut(s)	7
Zsp2I	ATGCAT	1 cut(s)	1510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.