Rh4DG410300

clathrin assembly protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0008006
Physical Location & Seq
Reverse (-)
62221620 .. 62226255
4636 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG410300.1

Sequence Viewer

Length: 1683 bp
ATGGGGACGCTTCAGTCGTGGAGAAAAGCCTACGGCGCCCTCAAGGACACCACCAAAGTCGGACTCGCCCACGTCAACAGCGATTACGCCGATTTGGATGTTGCTATAGTGAAGGCGACGAACCACGTCGAGTGTCCTCCCAAGGAGAGACACCTCAGAAAAATTCTGTTTGCCACGTCGGCGATTCGTCCCCGGGCAGATGTTGCTTATTGCATTCACGCTCTTTCGAGACGATTGAGCAAGACTCACAATTGGACGGTGGCTTTAAAAACACTGATAGTTATTCATAGGACTTTGAGGGAGGGTGATCCTACCTTCAGAGAAGAACTTGTAAATTTCTCTCAGAGAGGACGTATTCTCCAGCTTTCTAATTTTAAAGACGACTCCAGTCCCATTGCTTGGGATTGCTCTGCCTGGGTGCGTACATATGCATTGTTTTTAGAGGAACGACTTGAATGCTTTAGGGTTCTGAAGTATGACATTGAAGCTGAACGTCTTCCAAGACCTGCCCAGGCGCAGGAGAAGGGATACAGTAGAACTCGAGAACTGGATAGTGAAGAACTGTTGGACCACTTGCCTGCTTTACAGCAGCTGTTGTATCGCCTCATTGGTTGCCGGCCAGAAGGAGCAGCTGTCATGAATTATGTTATACAGTATGCACTGGCACTGGTACTGAAAGAGAGCTTTAAAATATATTGTGCTGTCAATGATGGAATTATAAATCTTATTGATAAGTTTTTTGAGATGCCAAGACATGAAGCGGTTAAAGCCCTTGATGTTTATAAGCGAGCTGGCCAACAGGCTGCCGGTCTCTCTGATTTTTATGAAATTTGCAAAGGGTTGGAACTTGCTAGGAATTTCCAGTTTCCTGTCTTGAGAGAGCCTCCTCAGTCCTTCCTTACAACAATGGAAGAATATATAAGAGAAGCACCGCGGGCTGTTAATGTTCCAACTGAGCCATTGCTTCTTTTGACATATAGACCAGAGGAGCCTCAACCTGAAGACACAAACTTATCTAGTGATGAACCTGAGCAGCTACCTTCAGACTTTCTAGCACAATCTGATGTTGAGACAGCGACTCCACCACCACCACCTCCTCCTCCTGCTCCTCAAAGTAACCTGGCTACTGGAGATTTACTGGGATTGGATTTTGCTACAGGTGATGCATCTGCCATTGAGGAAAGCAATGCTTTGGCTCTAGCCATAGTACCATCTGAAACTGCTCCAACATTCAATGTGCAATCAAAAGATTTTGATCCTAGTGGATGGGAACTTGCCCTGGTCACAACTCCAAGTACCGACATTTCATCAGCTAATGACAGGCAATTGGCTGGCGGGTTGGACTCCCTTACCCTGAACAGCTTATACGATGAAGGACAGTACAGGGCTTCTCAACAACCTGTTTATGGACAACCTGCCCCAAATCCATTCGAGGTACAAGATCCGTTTGCTTTGTCAAACAATGTTGCTGCCCCTCCTGCAGTTCAAATGGCGGCAATGGCTCAACAACAGTCCAATCCCTTTGGTCCGTTCCAACCCACCTATCCGCCGCCACATCAGAATGTGATGATGGGCGCAGCATCAAATCCTTTTGGTGATACTACTGGGTTTGGGACATTTCCTGTAAATCCTGTTCATCAACCGCAGACTAGCAACCCCTTTGGAAGCACAGGCCTACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

560

Amino Acids

62.0

Weight (kDa)

5.01

Isoelectric Point (pI)

54.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 309 7.2e-95 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 719, 783
AasI GACNNNNNNGTC 1 cut(s) 13
Acc36I ACCTGC 2 cut(s) 514, 1423
AccB1I GGYRCC 1 cut(s) 35
AccB7I CCANNNNNTGG 1 cut(s) 399
AccII CGCG 1 cut(s) 934
AciI CCGC 8 cut(s) 761, 932, 934, 1335, 1493, 1547, 1550, 1643
AclWI GGATC 3 cut(s) 302, 1250, 1436
AcoI YGGCCR 2 cut(s) 617, 793
AcsI RAATTY 4 cut(s) 162, 334, 828, 856
AcuI CTGAAG 4 cut(s) 301, 491, 1020, 1026
AcyI GRCGYC 1 cut(s) 36
AfaI GTAC 6 cut(s) 424, 672, 1209, 1297, 1382, 1437
AfiI CCNNNNNNNGG 3 cut(s) 399, 517, 1406
AgsI TTSAA 4 cut(s) 455, 485, 1234, 1487
AjiI CACGTC 3 cut(s) 73, 127, 177
AjnI CCWGG 4 cut(s) 413, 510, 1119, 1278
AluBI AGCT 9 cut(s) 364, 488, 592, 632, 684, 791, 1036, 1313, 1362
AluI AGCT 9 cut(s) 364, 488, 592, 632, 684, 791, 1036, 1313, 1362
Alw26I GTCTC 4 cut(s) 142, 223, 815, 1064
AlwI GGATC 3 cut(s) 302, 1250, 1436
AlwNI CAGNNNCTG 1 cut(s) 592
Ama87I CYCGRG 2 cut(s) 192, 540
AoxI GGCC 3 cut(s) 617, 793, 1672
ApeKI GCWGC 6 cut(s) 589, 629, 803, 1033, 1469, 1577
ApoI RAATTY 4 cut(s) 162, 334, 828, 856
Asp700I GAANNNNTTC 1 cut(s) 495
AspLEI GCGC 3 cut(s) 38, 517, 1577
AspS9I GGNCC 2 cut(s) 568, 1526
AsuC2I CCSGG 2 cut(s) 193, 194
AsuHPI GGTGA 3 cut(s) 317, 1172, 1607
AvaI CYCGRG 2 cut(s) 192, 540
AvaII GGWCC 2 cut(s) 568, 1526
BalI TGGCCA 1 cut(s) 795
BanI GGYRCC 1 cut(s) 35
BbsI GAAGAC 2 cut(s) 488, 1008
BbvI GCAGC 6 cut(s) 601, 641, 790, 1045, 1456, 1589
BccI CCATC 4 cut(s) 704, 1219, 1260, 1564
BceAI ACGGC 1 cut(s) 49
BcgI CGANNNNNNTGC 2 cut(s) 438, 472
BciT130I CCWGG 4 cut(s) 415, 512, 1121, 1280
BciVI GTATCC 1 cut(s) 521
BcnI CCSGG 2 cut(s) 193, 194
BcoDI GTCTC 4 cut(s) 142, 223, 815, 1064
BfaI CTAG 6 cut(s) 852, 1017, 1052, 1199, 1260, 1650
BfmI CTRYAG 3 cut(s) 105, 1155, 1479
BfoI RGCGCY 1 cut(s) 39
BfuAI ACCTGC 2 cut(s) 514, 1423
BfuI GTATCC 1 cut(s) 521
BglI GCCNNNNNGGC 1 cut(s) 179
BisI GCNGC 8 cut(s) 590, 630, 804, 1034, 1470, 1494, 1550, 1578
BlsI GCNGC 8 cut(s) 591, 631, 805, 1035, 1471, 1495, 1551, 1579
Bme1390I CCNGG 6 cut(s) 193, 194, 415, 512, 1121, 1280
Bme18I GGWCC 2 cut(s) 568, 1526
BmeT110I CYCGRG 2 cut(s) 192, 540
BmgBI CACGTC 3 cut(s) 73, 127, 177
BmgT120I GGNCC 2 cut(s) 568, 1526
BmiI GGNNCC 2 cut(s) 37, 990
BmrFI CCNGG 6 cut(s) 193, 194, 415, 512, 1121, 1280
BmrI ACTGGG 2 cut(s) 1148, 1614
BmsI GCATC 4 cut(s) 735, 1153, 1175, 1589
BmuI ACTGGG 2 cut(s) 1148, 1614
BoxI GACNNNNGTC 1 cut(s) 387
BpiI GAAGAC 2 cut(s) 488, 1008
BplI GAGNNNNNCTC 4 cut(s) 229, 261, 868, 900
BpmI CTGGAG 3 cut(s) 344, 370, 1149
Bpu10I CCTNAGC 1 cut(s) 1029
BpuEI CTTGAG 2 cut(s) 26, 895
BpuMI CCSGG 2 cut(s) 193, 194
BsaBI GATNNNNATC 1 cut(s) 1254
BsaHI GRCGYC 1 cut(s) 36
BsaI GGTCTC 1 cut(s) 815
BsaJI CCNNGG 7 cut(s) 141, 191, 192, 414, 510, 932, 1278
BsaXI ACNNNNNCTCC 6 cut(s) 342, 372, 618, 648, 1063, 1093
Bsc4I CCNNNNNNNGG 3 cut(s) 399, 517, 1406
Bse118I RCCGGY 2 cut(s) 615, 806
Bse1I ACTGG 8 cut(s) 387, 552, 666, 672, 862, 1132, 1143, 1609
Bse3DI GCAATG 4 cut(s) 393, 959, 1192, 1503
Bse8I GATNNNNATC 1 cut(s) 1254
BseBI CCWGG 4 cut(s) 415, 512, 1121, 1280
BseDI CCNNGG 7 cut(s) 141, 191, 192, 414, 510, 932, 1278
BseGI GGATG 2 cut(s) 103, 1271
BseJI GATNNNNATC 1 cut(s) 1254
BseLI CCNNNNNNNGG 3 cut(s) 399, 517, 1406
BseMI GCAATG 4 cut(s) 393, 959, 1192, 1503
BseMII CTCAG 5 cut(s) 169, 356, 902, 945, 1020
BseNI ACTGG 8 cut(s) 387, 552, 666, 672, 862, 1132, 1143, 1609
BseRI GAGGAG 5 cut(s) 876, 1001, 1086, 1089, 1098
BseXI GCAGC 6 cut(s) 601, 641, 790, 1045, 1456, 1589
Bsh1236I CGCG 1 cut(s) 934
BshFI GGCC 3 cut(s) 619, 795, 1674
BshNI GGYRCC 1 cut(s) 35
BsiHKCI CYCGRG 2 cut(s) 192, 540
BsiSI CCGG 3 cut(s) 193, 616, 807
BslFI GGGAC 4 cut(s) 19, 174, 375, 1627
BslI CCNNNNNNNGG 3 cut(s) 399, 517, 1406
BsmAI GTCTC 4 cut(s) 142, 223, 815, 1064
BsmBI CGTCTC 1 cut(s) 223
BsmFI GGGAC 4 cut(s) 19, 174, 375, 1627
BsmI GAATGC 2 cut(s) 213, 461
BsnI GGCC 3 cut(s) 619, 795, 1674
Bso31I GGTCTC 1 cut(s) 815
BsoBI CYCGRG 2 cut(s) 192, 540
Bsp143I GATC 3 cut(s) 307, 1255, 1441
BspACI CCGC 8 cut(s) 761, 932, 934, 1335, 1493, 1547, 1550, 1643
BspANI GGCC 3 cut(s) 619, 795, 1674
BspCNI CTCAG 5 cut(s) 168, 355, 901, 946, 1021
BspFNI CGCG 1 cut(s) 934
BspHI TCATGA 1 cut(s) 636
BspLI GGNNCC 2 cut(s) 37, 990
BspMAI CTGCAG 1 cut(s) 1483
BspMI ACCTGC 2 cut(s) 514, 1423
BspPI GGATC 3 cut(s) 302, 1250, 1436
BspT107I GGYRCC 1 cut(s) 35
BspTNI GGTCTC 1 cut(s) 815
BsrDI GCAATG 4 cut(s) 393, 959, 1192, 1503
BsrFI RCCGGY 2 cut(s) 615, 806
BsrI ACTGG 8 cut(s) 387, 552, 666, 672, 862, 1132, 1143, 1609
BssAI RCCGGY 2 cut(s) 615, 806
BssECI CCNNGG 7 cut(s) 141, 191, 192, 414, 510, 932, 1278
BssMI GATC 3 cut(s) 307, 1255, 1441
BssNI GRCGYC 1 cut(s) 36
BssT1I CCWWGG 1 cut(s) 141
Bst2UI CCWGG 4 cut(s) 415, 512, 1121, 1280
Bst4CI ACNGT 6 cut(s) 259, 533, 564, 654, 1380, 1512
BstACI GRCGYC 1 cut(s) 36
BstAPI GCANNNNNTGC 1 cut(s) 203
BstC8I GCNNGC 6 cut(s) 579, 617, 789, 793, 936, 1333
BstDEI CTNAG 5 cut(s) 155, 342, 888, 954, 1029
BstDSI CCRYGG 1 cut(s) 932
BstF5I GGATG 2 cut(s) 103, 1271
BstFNI CGCG 1 cut(s) 934
BstH2I RGCGCY 1 cut(s) 39
BstHHI GCGC 3 cut(s) 38, 517, 1577
BstKTI GATC 3 cut(s) 310, 1258, 1444
BstMAI GTCTC 4 cut(s) 142, 223, 815, 1064
BstMBI GATC 3 cut(s) 307, 1255, 1441
BstMWI GCNNNNNNNGC 7 cut(s) 35, 179, 203, 767, 935, 1478, 1499
BstNI CCWGG 4 cut(s) 415, 512, 1121, 1280
BstPAI GACNNNNGTC 1 cut(s) 387
BstSCI CCNGG 6 cut(s) 191, 192, 413, 510, 1119, 1278
BstSFI CTRYAG 3 cut(s) 105, 1155, 1479
BstUI CGCG 1 cut(s) 934
BstV1I GCAGC 6 cut(s) 601, 641, 790, 1045, 1456, 1589
BstV2I GAAGAC 2 cut(s) 488, 1008
BstX2I RGATCY 1 cut(s) 1441
BstYI RGATCY 1 cut(s) 1441
BsuI GTATCC 1 cut(s) 521
BsuRI GGCC 3 cut(s) 619, 795, 1674
BtgI CCRYGG 1 cut(s) 932
BtrI CACGTC 3 cut(s) 73, 127, 177
BtsCI GGATG 2 cut(s) 103, 1271
BtsIMutI CAGTG 3 cut(s) 272, 659, 665
BveI ACCTGC 2 cut(s) 514, 1423
Cac8I GCNNGC 6 cut(s) 579, 617, 789, 793, 936, 1333
CaiI CAGNNNCTG 1 cut(s) 592
CciI TCATGA 1 cut(s) 636
CfoI GCGC 3 cut(s) 38, 517, 1577
Cfr10I RCCGGY 2 cut(s) 615, 806
Cfr13I GGNCC 2 cut(s) 568, 1526
Cfr42I CCGCGG 1 cut(s) 935
Cfr9I CCCGGG 1 cut(s) 192
CseI GACGC 1 cut(s) 16
Csp6I GTAC 6 cut(s) 423, 671, 1208, 1296, 1381, 1436
CviAII CATG 2 cut(s) 637, 755
CviQI GTAC 6 cut(s) 423, 671, 1208, 1296, 1381, 1436
DdeI CTNAG 5 cut(s) 155, 342, 888, 954, 1029
DinI GGCGCC 1 cut(s) 37
DpnI GATC 3 cut(s) 309, 1257, 1443
DpnII GATC 3 cut(s) 307, 1255, 1441
DraI TTTAAA 3 cut(s) 267, 376, 688
DrdI GACNNNNNNGTC 1 cut(s) 13
DseDI GACNNNNNNGTC 1 cut(s) 13
EaeI YGGCCR 2 cut(s) 617, 793
EciI GGCGGA 1 cut(s) 1536
Eco130I CCWWGG 1 cut(s) 141
Eco147I AGGCCT 1 cut(s) 1674
Eco31I GGTCTC 1 cut(s) 815
Eco47I GGWCC 2 cut(s) 568, 1526
Eco57I CTGAAG 4 cut(s) 301, 491, 1020, 1026
Eco88I CYCGRG 2 cut(s) 192, 540
EcoRII CCWGG 4 cut(s) 413, 510, 1119, 1278
EcoT14I CCWWGG 1 cut(s) 141
EcoT22I ATGCAT 2 cut(s) 433, 1168
EgeI GGCGCC 1 cut(s) 37
EheI GGCGCC 1 cut(s) 37
ErhI CCWWGG 1 cut(s) 141
Esp3I CGTCTC 1 cut(s) 223
FaeI CATG 2 cut(s) 640, 758
FalI AAGNNNNNCTT 2 cut(s) 1174, 1206
FaqI GGGAC 4 cut(s) 19, 174, 375, 1627
FatI CATG 2 cut(s) 636, 754
FauI CCCGC 2 cut(s) 927, 1328
FauNDI CATATG 1 cut(s) 427
Fnu4HI GCNGC 8 cut(s) 590, 630, 804, 1034, 1470, 1494, 1550, 1578
FokI GGATG 2 cut(s) 110, 1278
Fsp4HI GCNGC 8 cut(s) 590, 630, 804, 1034, 1470, 1494, 1550, 1578
FspBI CTAG 6 cut(s) 852, 1017, 1052, 1199, 1260, 1650
GlaI GCGC 3 cut(s) 37, 516, 1576
GluI GCNGC 8 cut(s) 590, 630, 804, 1034, 1470, 1494, 1550, 1578
GsuI CTGGAG 3 cut(s) 344, 370, 1149
HaeII RGCGCY 1 cut(s) 39
HaeIII GGCC 3 cut(s) 619, 795, 1674
HapII CCGG 3 cut(s) 193, 616, 807
HgaI GACGC 1 cut(s) 16
HhaI GCGC 3 cut(s) 38, 517, 1577
Hin1I GRCGYC 1 cut(s) 36
Hin1II CATG 2 cut(s) 640, 758
Hin6I GCGC 3 cut(s) 36, 515, 1575
HinP1I GCGC 3 cut(s) 36, 515, 1575
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HinfI GANTC 6 cut(s) 63, 184, 244, 383, 1078, 1343
HpaII CCGG 3 cut(s) 193, 616, 807
HphI GGTGA 3 cut(s) 317, 1172, 1607
Hpy166II GTNNAC 1 cut(s) 76
Hpy188III TCNNGA 4 cut(s) 228, 542, 637, 874
Hpy8I GTNNAC 1 cut(s) 76
Hpy99I CGWCG 3 cut(s) 121, 131, 181
HpyAV CCTTC 7 cut(s) 106, 325, 517, 617, 904, 1050, 1367
HpyCH4III ACNGT 6 cut(s) 259, 533, 564, 654, 1380, 1512
HpyCH4IV ACGT 5 cut(s) 72, 126, 176, 352, 493
HpyCH4V TGCA 7 cut(s) 213, 431, 659, 834, 1166, 1240, 1481
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 179, 203, 767, 935, 1478, 1499
HpyF3I CTNAG 5 cut(s) 155, 342, 888, 954, 1029
HpySE526I ACGT 5 cut(s) 72, 126, 176, 352, 493
Hsp92I GRCGYC 1 cut(s) 36
Hsp92II CATG 2 cut(s) 640, 758
HspAI GCGC 3 cut(s) 36, 515, 1575
KasI GGCGCC 1 cut(s) 35
KroI GCCGGC 1 cut(s) 615
KroNI GCCGGC 1 cut(s) 617
KspI CCGCGG 1 cut(s) 935
Kzo9I GATC 3 cut(s) 307, 1255, 1441
LmnI GCTCC 4 cut(s) 626, 988, 1111, 1228
Lsp1109I GCAGC 6 cut(s) 601, 641, 790, 1045, 1456, 1589
LweI GCATC 4 cut(s) 735, 1153, 1175, 1589
MaeI CTAG 6 cut(s) 852, 1017, 1052, 1199, 1260, 1650
MaeII ACGT 5 cut(s) 72, 126, 176, 352, 493
MaeIII GTNAC 2 cut(s) 1115, 1282
MalI GATC 3 cut(s) 309, 1257, 1443
MboI GATC 3 cut(s) 307, 1255, 1441
MboII GAAGA 5 cut(s) 335, 488, 569, 923, 1013
MfeI CAATTG 2 cut(s) 250, 1325
MflI RGATCY 1 cut(s) 1441
MlsI TGGCCA 1 cut(s) 795
MluCI AATT 9 cut(s) 162, 250, 334, 370, 640, 714, 828, 856, 1325
MluNI TGGCCA 1 cut(s) 795
Mly113I GGCGCC 1 cut(s) 36
MlyI GAGTC 5 cut(s) 57, 238, 377, 1072, 1337
MmeI TCCRAC 7 cut(s) 40, 546, 822, 974, 1250, 1320, 1558
Mox20I TGGCCA 1 cut(s) 795
Mph1103I ATGCAT 2 cut(s) 433, 1168
MroNI GCCGGC 1 cut(s) 615
MroXI GAANNNNTTC 1 cut(s) 495
MscI TGGCCA 1 cut(s) 795
MseI TTAA 5 cut(s) 266, 375, 687, 765, 942
MslI CAYNNNNRTG 1 cut(s) 1560
Msp20I TGGCCA 1 cut(s) 795
MspA1I CMGCKG 3 cut(s) 592, 632, 934
MspI CCGG 3 cut(s) 193, 616, 807
MspR9I CCNGG 6 cut(s) 193, 194, 415, 512, 1121, 1280
MunI CAATTG 2 cut(s) 250, 1325
Mva1269I GAATGC 2 cut(s) 213, 461
MvaI CCWGG 4 cut(s) 415, 512, 1121, 1280
MvnI CGCG 1 cut(s) 934
MwoI GCNNNNNNNGC 7 cut(s) 35, 179, 203, 767, 935, 1478, 1499
NaeI GCCGGC 1 cut(s) 617
NarI GGCGCC 1 cut(s) 36
NciI CCSGG 2 cut(s) 193, 194
NdeI CATATG 1 cut(s) 427
NdeII GATC 3 cut(s) 307, 1255, 1441
NgoMIV GCCGGC 1 cut(s) 615
NlaIII CATG 2 cut(s) 640, 758
NlaIV GGNNCC 2 cut(s) 37, 990
NmuCI GTSAC 1 cut(s) 1282
NsiI ATGCAT 2 cut(s) 433, 1168
PaeR7I CTCGAG 1 cut(s) 540
PagI TCATGA 1 cut(s) 636
PceI AGGCCT 1 cut(s) 1674
PcsI WCGNNNNNNNCGW 2 cut(s) 14, 78
PctI GAATGC 2 cut(s) 213, 461
PdiI GCCGGC 1 cut(s) 617
PdmI GAANNNNTTC 1 cut(s) 495
PfeI GAWTC 1 cut(s) 184
PflMI CCANNNNNTGG 1 cut(s) 399
PkrI GCNGC 8 cut(s) 591, 631, 805, 1035, 1471, 1495, 1551, 1579
PleI GAGTC 5 cut(s) 57, 238, 377, 1072, 1337
PluTI GGCGCC 1 cut(s) 39
PpsI GAGTC 5 cut(s) 57, 238, 377, 1072, 1337
PshAI GACNNNNGTC 1 cut(s) 387
PsiI TTATAA 2 cut(s) 719, 783
Psp6I CCWGG 4 cut(s) 413, 510, 1119, 1278
PspGI CCWGG 4 cut(s) 413, 510, 1119, 1278
PspN4I GGNNCC 2 cut(s) 37, 990
PspPI GGNCC 2 cut(s) 568, 1526
PsrI GAACNNNNNNTAC 4 cut(s) 1349, 1381, 1617, 1649
PstI CTGCAG 1 cut(s) 1483
PstNI CAGNNNCTG 1 cut(s) 592
PsuI RGATCY 1 cut(s) 1441
PvuII CAGCTG 2 cut(s) 592, 632
RsaI GTAC 6 cut(s) 424, 672, 1209, 1297, 1382, 1437
RsaNI GTAC 6 cut(s) 423, 671, 1208, 1296, 1381, 1436
RseI CAYNNNNRTG 1 cut(s) 1560
SacII CCGCGG 1 cut(s) 935
SaqAI TTAA 5 cut(s) 266, 375, 687, 765, 942
SatI GCNGC 8 cut(s) 590, 630, 804, 1034, 1470, 1494, 1550, 1578
Sau3AI GATC 3 cut(s) 307, 1255, 1441
Sau96I GGNCC 2 cut(s) 568, 1526
SchI GAGTC 5 cut(s) 57, 238, 377, 1072, 1337
ScrFI CCNGG 6 cut(s) 193, 194, 415, 512, 1121, 1280
SfaNI GCATC 4 cut(s) 735, 1153, 1175, 1589
SfcI CTRYAG 3 cut(s) 105, 1155, 1479
SfoI GGCGCC 1 cut(s) 37
Sfr274I CTCGAG 1 cut(s) 540
Sfr303I CCGCGG 1 cut(s) 935
SgrBI CCGCGG 1 cut(s) 935
SinI GGWCC 2 cut(s) 568, 1526
SlaI CTCGAG 1 cut(s) 540
SmaI CCCGGG 1 cut(s) 194
SmiMI CAYNNNNRTG 1 cut(s) 1560
SmlI CTYRAG 3 cut(s) 41, 540, 874
SmoI CTYRAG 3 cut(s) 41, 540, 874
Sse9I AATT 9 cut(s) 162, 250, 334, 370, 640, 714, 828, 856, 1325
SseBI AGGCCT 1 cut(s) 1674
SsiI CCGC 8 cut(s) 761, 932, 934, 1335, 1493, 1547, 1550, 1643
SspDI GGCGCC 1 cut(s) 35
SspMI CTAG 6 cut(s) 852, 1017, 1052, 1199, 1260, 1650
StuI AGGCCT 1 cut(s) 1674
StyD4I CCNGG 6 cut(s) 191, 192, 413, 510, 1119, 1278
StyI CCWWGG 1 cut(s) 141
TaaI ACNGT 6 cut(s) 259, 533, 564, 654, 1380, 1512
TaiI ACGT 5 cut(s) 75, 129, 179, 355, 496
TaqI TCGA 4 cut(s) 129, 227, 541, 1431
TasI AATT 9 cut(s) 162, 250, 334, 370, 640, 714, 828, 856, 1325
TatI WGTACW 1 cut(s) 1380
TauI GCSGC 2 cut(s) 1496, 1552
TfiI GAWTC 1 cut(s) 184
Tru1I TTAA 5 cut(s) 266, 375, 687, 765, 942
Tru9I TTAA 5 cut(s) 266, 375, 687, 765, 942
TscAI CASTG 3 cut(s) 279, 666, 672
TseFI GTSAC 1 cut(s) 1282
TseI GCWGC 6 cut(s) 589, 629, 803, 1033, 1469, 1577
Tsp45I GTSAC 1 cut(s) 1282
TspDTI ATGAA 8 cut(s) 275, 653, 771, 840, 1038, 1296, 1386, 1625
TspGWI ACGGA 2 cut(s) 1434, 1518
TspMI CCCGGG 1 cut(s) 192
TspRI CASTG 3 cut(s) 279, 666, 672
Van91I CCANNNNNTGG 1 cut(s) 399
VpaK11BI GGWCC 2 cut(s) 568, 1526
XapI RAATTY 4 cut(s) 162, 334, 828, 856
XhoI CTCGAG 1 cut(s) 540
XmaI CCCGGG 1 cut(s) 192
XmnI GAANNNNTTC 1 cut(s) 495
XspI CTAG 6 cut(s) 852, 1017, 1052, 1199, 1260, 1650
Zsp2I ATGCAT 2 cut(s) 433, 1168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.