Rorug02G0169900

UDP-glycosyltransferase 91A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000339
Physical Location & Seq
Forward (+)
15234683 .. 15237316
2634 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0169900.1

Sequence Viewer

Length: 957 bp
ATGGCCGGAGGTGAGCTTGTTGCAGGGGCAGCTCTGGGATTACCATTTAATATCCTGTATGATGTGATTAAGGATGTGATGAACAAGACTACAATGTTTAAACCCCTTCTCGGAGATCTCAGCTCCACCATGGAATCGTTACAACCACTGATCACTGACATAGCCAAGCACAACAGGGACTTGGGACGTCCAGAGGAGGAGCTACAAAGTTTCAAGAAGCAAATGGAGAAGGGGGCAGAGCTTGTTCGAAAGTGCTCCAAGGTTGGTTTATGGACCAGCTACAAGAAATATGGATACGCCAACAAGTTAATGGACCTAGACAAATCTCTCAACAGATTGTTGGCTATACTCAGCGTGCAGGGAATAAGGGCCGGGATGGAGACCTTGGTGGTGGTGAAGGAAACACTGACTACGGTGAGGAGAATTGAAGACAATGGTGTTGGTAAAGAAGAGAAAGTTGTGGTGCATAATCTGATCGAGTTTCAAAAGGGAAAGCTTATTGGGAGTGGCCCGTTCGGACCTCGCTATGTTGCCAGCAATAGAGTAACTGGAGCTTTATGTTCAATGAAGGAAGTTGACTTATCTCCCAATGGCTCAATTTCTGCAAAATGTTTAGAGACGGAAATTAGAGTGCTCACCAAGCTGAGGCATCCTAACATTGTGGAGTTTTATGGAAGCCAAATGGTTGGTGATCGATTTTATATATATCAGGAGTATGTCCACCCTGGCTCTTTGAGCAGATATATGAATGAACGTTATGGAGCCATAACAGAATCTATTGTTCGTAATTTTACTCGGCAGATAATGTCTGGGTTGGCTTACATGCATAGCAAACACATAGCACACAGGAGCATCAAAGGGGCTAATTTGCTTGTCGATTCAAGTGGAATTGTCAAGCTAGCTGACTTTGGGATGGCACGATTATTGTTGCCATTTCGAGTAGCTTTCAGGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

318

Amino Acids

35.48

Weight (kDa)

9.5

Isoelectric Point (pI)

43.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 5 - 139 1.1e-32 Arabidopsis broad-spectrum mildew resistance protein RPW8
Pkinase PF00069 161 - 309 2.5e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 164 - 309 6.1e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000339)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22590
fragaria_vesca FvH4_1g12660 FvH4_1g19380 FvH4_1g19390 FvH4_1g19400 FvH4_1g19402 FvH4_1g19420 FvH4_1g19450 FvH4_1g19460 FvH4_1g19464 FvH4_1g19480
malus_domestica MD01G1041000.v1.1 MD15G1310300.v1.1
prunus_persica Prupe.6G203500_v2.0.a1 Prupe.6G203700_v2.0.a1 Prupe.6G203800_v2.0.a1 Prupe.6G203900_v2.0.a1 Prupe.6G204000_v2.0.a1
pyrus_communis pycom01g06860
rosa_chinensis RchiOBHm_Chr2g0110741 RchiOBHm_Chr2g0110761 RchiOBHm_Chr2g0110781 RchiOBHm_Chr2g0110791 RchiOBHm_Chr2g0110831 RchiOBHm_Chr2g0110841 RchiOBHm_Chr2g0110861 RchiOBHm_Chr2g0110881 RchiOBHm_Chr2g0110901 RchiOBHm_Chr2g0110931 RchiOBHm_Chr2g0111531
rosa_laevigata RLG00000017837 RLG00000017838 RLG00000017839 RLG00000017840 RLG00000017842 RLG00000017843 RLG00000017844 RLG00000017845 RLG00000017846 RLG00000017848 RLG00000017850 RLG00000017854 RLG00000017897
rosa_multiflora Rmu_co8508665.1_g000001 Rmu_sc0003291.1_g000004 Rmu_sc0003291.1_g000015 Rmu_sc0003291.1_g000016 Rmu_sc0003291.1_g000023 Rmu_sc0003291.1_g000029 Rmu_sc0003291.1_g000032 Rmu_sc0003994.1_g000017 Rmu_sc0003994.1_g000019
rosa_roxburghii Rroxscaffold_2G00132240 Rroxscaffold_2G00132800 Rroxscaffold_2G00132810 Rroxscaffold_2G00132830 Rroxscaffold_2G00132850 Rroxscaffold_2G00132900 Rroxscaffold_2G00132930 Rroxscaffold_2G00132940 Rroxscaffold_2G00132950 Rroxscaffold_2G00132970
rosa_rugosa Rorug02G0169400.1 Rorug02G0169500 Rorug02G0169500 Rorug02G0169500 Rorug02G0169600 Rorug02G0169700 Rorug02G0169800 Rorug02G0169900 Rorug02G0170000 Rorug02G0170100 Rorug02G0170200 Rorug02G0174900
rosa_samantha Rh2BG231600 Rh2BG231800 Rh2BG232100 Rh2BG232400 Rh2BG232600 Rh2BG232800 Rh2BG233200 Rh2BG233400 Rh2BG233700 Rh2BG239500 Rh2CG224000 Rh2CG224300 Rh2CG224400 Rh2CG224700 Rh2CG224800 Rh2CG225000 Rh2CG225200 Rh2CG225300 Rh2DG227900 Rh2DG228000 Rh2DG228100 Rh2DG228800 Rh2DG228900 Rh2DG229200 Rh2DG229400 Rh2DG229600 Rh2DG229800 Rh2DG229900 Rh2DG230200
rosa_wichuraiana Rw2G017100 Rw2G017110 Rw2G017130 Rw2G017140 Rw2G017150 Rw2G017170 Rw2G017580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 190
AclI AACGTT 1 cut(s) 754
AcoI YGGCCR 1 cut(s) 3
AcyI GRCGYC 1 cut(s) 187
AfiI CCNNNNNNNGG 2 cut(s) 110, 645
AgsI TTSAA 5 cut(s) 214, 428, 485, 564, 882
AjnI CCWGG 1 cut(s) 724
Alw21I GWGCWC 2 cut(s) 257, 636
Alw26I GTCTC 2 cut(s) 374, 611
AoxI GGCC 3 cut(s) 3, 369, 508
ApeKI GCWGC 1 cut(s) 29
AspS9I GGNCC 5 cut(s) 273, 313, 369, 509, 518
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 5 cut(s) 23, 406, 427, 628, 701
AsuII TTCGAA 1 cut(s) 247
AsuNHI GCTAGC 1 cut(s) 898
AvaII GGWCC 3 cut(s) 273, 313, 518
BbsI GAAGAC 1 cut(s) 435
Bbv12I GWGCWC 2 cut(s) 257, 636
BbvCI CCTCAGC 1 cut(s) 644
BbvI GCAGC 1 cut(s) 41
BccI CCATC 2 cut(s) 370, 907
BciT130I CCWGG 1 cut(s) 726
BciVI GTATCC 1 cut(s) 287
BclI TGATCA 1 cut(s) 150
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 2 cut(s) 374, 611
BfaI CTAG 2 cut(s) 317, 899
BfuI GTATCC 1 cut(s) 287
BglII AGATCT 1 cut(s) 115
BisI GCNGC 1 cut(s) 30
BlsI GCNGC 1 cut(s) 31
Bme1390I CCNGG 2 cut(s) 373, 726
Bme18I GGWCC 3 cut(s) 273, 313, 518
BmgT120I GGNCC 5 cut(s) 273, 313, 369, 509, 518
BmiI GGNNCC 1 cut(s) 763
BmrFI CCNGG 2 cut(s) 373, 726
BmsI GCATC 2 cut(s) 658, 861
BmtI GCTAGC 1 cut(s) 902
BpiI GAAGAC 1 cut(s) 435
BpmI CTGGAG 1 cut(s) 570
Bpu10I CCTNAGC 1 cut(s) 644
Bpu14I TTCGAA 1 cut(s) 247
BpuMI CCSGG 1 cut(s) 373
Bsa29I ATCGAT 1 cut(s) 694
BsaHI GRCGYC 1 cut(s) 187
BsaI GGTCTC 1 cut(s) 374
BsaJI CCNNGG 4 cut(s) 129, 258, 384, 724
Bsc4I CCNNNNNNNGG 2 cut(s) 110, 645
Bse1I ACTGG 1 cut(s) 553
BseBI CCWGG 1 cut(s) 726
BseCI ATCGAT 1 cut(s) 694
BseDI CCNNGG 4 cut(s) 129, 258, 384, 724
BseGI GGATG 4 cut(s) 79, 381, 649, 918
BseLI CCNNNNNNNGG 2 cut(s) 110, 645
BseMII CTCAG 3 cut(s) 133, 364, 635
BseNI ACTGG 1 cut(s) 553
BseRI GAGGAG 3 cut(s) 209, 212, 433
BseXI GCAGC 1 cut(s) 41
BsgI GTGCAG 1 cut(s) 377
BshFI GGCC 3 cut(s) 5, 371, 510
BshVI ATCGAT 1 cut(s) 694
BsiHKAI GWGCWC 2 cut(s) 257, 636
BsiSI CCGG 2 cut(s) 6, 372
BslFI GGGAC 2 cut(s) 191, 198
BslI CCNNNNNNNGG 2 cut(s) 110, 645
BsmAI GTCTC 2 cut(s) 374, 611
BsmBI CGTCTC 1 cut(s) 611
BsmFI GGGAC 2 cut(s) 191, 198
BsnI GGCC 3 cut(s) 5, 371, 510
Bso31I GGTCTC 1 cut(s) 374
Bsp119I TTCGAA 1 cut(s) 247
Bsp1286I GDGCHC 2 cut(s) 257, 636
Bsp143I GATC 4 cut(s) 115, 150, 474, 691
Bsp19I CCATGG 1 cut(s) 129
BspANI GGCC 3 cut(s) 5, 371, 510
BspCNI CTCAG 3 cut(s) 132, 363, 636
BspDI ATCGAT 1 cut(s) 694
BspLI GGNNCC 1 cut(s) 763
BspOI GCTAGC 1 cut(s) 902
BspT104I TTCGAA 1 cut(s) 247
BspTNI GGTCTC 1 cut(s) 374
BsrI ACTGG 1 cut(s) 553
BssECI CCNNGG 4 cut(s) 129, 258, 384, 724
BssMI GATC 4 cut(s) 115, 150, 474, 691
BssNI GRCGYC 1 cut(s) 187
BssT1I CCWWGG 3 cut(s) 129, 258, 384
Bst2UI CCWGG 1 cut(s) 726
Bst4CI ACNGT 1 cut(s) 415
Bst6I CTCTTC 1 cut(s) 444
BstACI GRCGYC 1 cut(s) 187
BstBI TTCGAA 1 cut(s) 247
BstC8I GCNNGC 3 cut(s) 356, 535, 900
BstDEI CTNAG 3 cut(s) 119, 350, 644
BstDSI CCRYGG 1 cut(s) 129
BstF5I GGATG 4 cut(s) 79, 381, 649, 918
BstKTI GATC 4 cut(s) 118, 153, 477, 694
BstMAI GTCTC 2 cut(s) 374, 611
BstMBI GATC 4 cut(s) 115, 150, 474, 691
BstMWI GCNNNNNNNGC 4 cut(s) 29, 640, 735, 950
BstNI CCWGG 1 cut(s) 726
BstNSI RCATGY 1 cut(s) 826
BstSCI CCNGG 2 cut(s) 371, 724
BstV1I GCAGC 1 cut(s) 41
BstV2I GAAGAC 1 cut(s) 435
BstX2I RGATCY 1 cut(s) 115
BstXI CCANNNNNNTGG 1 cut(s) 686
BstYI RGATCY 1 cut(s) 115
Bsu15I ATCGAT 1 cut(s) 694
BsuI GTATCC 1 cut(s) 287
BsuRI GGCC 3 cut(s) 5, 371, 510
BsuTUI ATCGAT 1 cut(s) 694
BtgI CCRYGG 1 cut(s) 129
BtsCI GGATG 4 cut(s) 79, 381, 649, 918
BtsIMutI CAGTG 3 cut(s) 146, 153, 404
Cac8I GCNNGC 3 cut(s) 356, 535, 900
Cfr13I GGNCC 5 cut(s) 273, 313, 369, 509, 518
ClaI ATCGAT 1 cut(s) 694
CviAII CATG 3 cut(s) 130, 823, 954
DdeI CTNAG 3 cut(s) 119, 350, 644
DpnI GATC 4 cut(s) 117, 152, 476, 693
DpnII GATC 4 cut(s) 115, 150, 474, 691
DraI TTTAAA 1 cut(s) 100
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 444
EarI CTCTTC 1 cut(s) 444
Eco130I CCWWGG 3 cut(s) 129, 258, 384
Eco31I GGTCTC 1 cut(s) 374
Eco47I GGWCC 3 cut(s) 273, 313, 518
EcoRII CCWGG 1 cut(s) 724
EcoT14I CCWWGG 3 cut(s) 129, 258, 384
EcoT22I ATGCAT 1 cut(s) 828
ErhI CCWWGG 3 cut(s) 129, 258, 384
Esp3I CGTCTC 1 cut(s) 611
FaeI CATG 3 cut(s) 133, 826, 957
FaqI GGGAC 2 cut(s) 191, 198
FatI CATG 3 cut(s) 129, 822, 953
FbaI TGATCA 1 cut(s) 150
Fnu4HI GCNGC 1 cut(s) 30
FokI GGATG 4 cut(s) 86, 388, 636, 925
Fsp4HI GCNGC 1 cut(s) 30
FspBI CTAG 2 cut(s) 317, 899
GluI GCNGC 1 cut(s) 30
GsuI CTGGAG 1 cut(s) 570
HaeIII GGCC 3 cut(s) 5, 371, 510
HapII CCGG 2 cut(s) 6, 372
Hin1I GRCGYC 1 cut(s) 187
Hin1II CATG 3 cut(s) 133, 826, 957
HincII GTYRAC 1 cut(s) 577
HindII GTYRAC 1 cut(s) 577
HindIII AAGCTT 1 cut(s) 494
HinfI GANTC 3 cut(s) 134, 773, 878
HpaII CCGG 2 cut(s) 6, 372
HphI GGTGA 5 cut(s) 23, 406, 427, 628, 701
Hpy166II GTNNAC 2 cut(s) 577, 721
Hpy188I TCNGA 3 cut(s) 113, 474, 518
Hpy188III TCNNGA 3 cut(s) 191, 214, 710
Hpy8I GTNNAC 2 cut(s) 577, 721
HpyAV CCTTC 4 cut(s) 116, 223, 391, 562
HpyCH4III ACNGT 1 cut(s) 415
HpyCH4IV ACGT 2 cut(s) 187, 754
HpyCH4V TGCA 5 cut(s) 23, 358, 466, 605, 826
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 640, 735, 950
HpyF3I CTNAG 3 cut(s) 119, 350, 644
HpySE526I ACGT 2 cut(s) 187, 754
Hsp92I GRCGYC 1 cut(s) 187
Hsp92II CATG 3 cut(s) 133, 826, 957
Ksp22I TGATCA 1 cut(s) 150
Kzo9I GATC 4 cut(s) 115, 150, 474, 691
LmnI GCTCC 6 cut(s) 128, 199, 260, 551, 761, 849
Lsp1109I GCAGC 1 cut(s) 41
LweI GCATC 2 cut(s) 658, 861
MaeI CTAG 2 cut(s) 317, 899
MaeII ACGT 2 cut(s) 187, 754
MaeIII GTNAC 2 cut(s) 138, 544
MalI GATC 4 cut(s) 117, 152, 476, 693
MboI GATC 4 cut(s) 115, 150, 474, 691
MboII GAAGA 2 cut(s) 440, 461
MflI RGATCY 1 cut(s) 115
MhlI GDGCHC 2 cut(s) 257, 636
MluCI AATT 6 cut(s) 423, 597, 624, 787, 865, 888
MnlI CCTC 5 cut(s) 187, 190, 411, 531, 639
Mph1103I ATGCAT 1 cut(s) 828
MseI TTAA 4 cut(s) 48, 69, 99, 308
MspI CCGG 2 cut(s) 6, 372
MspR9I CCNGG 2 cut(s) 373, 726
MssI GTTTAAAC 1 cut(s) 100
MvaI CCWGG 1 cut(s) 726
MwoI GCNNNNNNNGC 4 cut(s) 29, 640, 735, 950
NciI CCSGG 1 cut(s) 373
NcoI CCATGG 1 cut(s) 129
NdeII GATC 4 cut(s) 115, 150, 474, 691
NheI GCTAGC 1 cut(s) 898
NlaIII CATG 3 cut(s) 133, 826, 957
NlaIV GGNNCC 1 cut(s) 763
NmeAIII GCCGAG 1 cut(s) 775
NsiI ATGCAT 1 cut(s) 828
NspI RCATGY 1 cut(s) 826
NspV TTCGAA 1 cut(s) 247
PfeI GAWTC 3 cut(s) 134, 773, 878
PkrI GCNGC 1 cut(s) 31
PmeI GTTTAAAC 1 cut(s) 100
Psp1406I AACGTT 1 cut(s) 754
Psp6I CCWGG 1 cut(s) 724
PspGI CCWGG 1 cut(s) 724
PspN4I GGNNCC 1 cut(s) 763
PspPI GGNCC 5 cut(s) 273, 313, 369, 509, 518
PsuI RGATCY 1 cut(s) 115
SaqAI TTAA 4 cut(s) 48, 69, 99, 308
SatI GCNGC 1 cut(s) 30
Sau3AI GATC 4 cut(s) 115, 150, 474, 691
Sau96I GGNCC 5 cut(s) 273, 313, 369, 509, 518
ScrFI CCNGG 2 cut(s) 373, 726
SduI GDGCHC 2 cut(s) 257, 636
SfaNI GCATC 2 cut(s) 658, 861
SfuI TTCGAA 1 cut(s) 247
SinI GGWCC 3 cut(s) 273, 313, 518
Sse9I AATT 6 cut(s) 423, 597, 624, 787, 865, 888
SspMI CTAG 2 cut(s) 317, 899
StyD4I CCNGG 2 cut(s) 371, 724
StyI CCWWGG 3 cut(s) 129, 258, 384
TaaI ACNGT 1 cut(s) 415
TaiI ACGT 2 cut(s) 190, 757
TaqI TCGA 5 cut(s) 247, 477, 694, 876, 937
TasI AATT 6 cut(s) 423, 597, 624, 787, 865, 888
TfiI GAWTC 3 cut(s) 134, 773, 878
Tru1I TTAA 4 cut(s) 48, 69, 99, 308
Tru9I TTAA 4 cut(s) 48, 69, 99, 308
TscAI CASTG 3 cut(s) 153, 160, 411
TseI GCWGC 1 cut(s) 29
TspDTI ATGAA 4 cut(s) 95, 581, 761, 765
TspGWI ACGGA 1 cut(s) 635
TspRI CASTG 3 cut(s) 153, 160, 411
VpaK11BI GGWCC 3 cut(s) 273, 313, 518
XceI RCATGY 1 cut(s) 826
XcmI CCANNNNNNNNNTGG 1 cut(s) 307
XspI CTAG 2 cut(s) 317, 899
ZraI GACGTC 1 cut(s) 188
Zsp2I ATGCAT 1 cut(s) 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.