Rorug02G0170200

UDP-glycosyltransferase 91A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000339
Physical Location & Seq
Reverse (-)
15285155 .. 15286147
993 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0170200.1

Sequence Viewer

Length: 993 bp
ATGGAGTCATCATATGATGAGTCAAGATCACCCCACTTGAAGTACAAACCGAGCAAGTGGGACGAAAGCCAAGACAAGCCATTGGGGTCTAAGATGGCAGAACTGATCAAAACCAAGGCAGAGCTCAAGAAAGCTAGAGAGAGCACCATGCAGCTATGGCTAGACTCCAAGCCTCTCATCGACGAGCTTGAAATGCTGAAATCTGGCCTTGCAAGAGCTGAAAACCAGTGTGCCACGCCCAATACTACTATGATATCCGAGCTGAAATCACAGCTCGATGCAACCCATGCATCCATCAAGGCCAAAAAGGAGGACGAACTAAAGGCGAGAAACATGATCGATGAAACAAATCAGGCTTTGGATCAAACACGTCGAGAGATTGTAAGCATCAACTTGGAGACAGATGAAGAACGGAAAGCAATAGCAAGAATGACACAAGACATGCGGCTGAGGAGACAGACTCTACGAACGCTGCATCTTACACTTCGAGCTGTAAGAATCGAAAAGGATGCTATTGCCGCATCAGCAGCAGAAGCTCTTCAGTACATGAACTATTCAGAAATGGATAATTCTACAGTCAACATCAGCCACGAAGAGTACCCTGGCTTGATGAAAAGAGCTCAAGACGAAAACTCTCTTTCAGACTGGCGTATTGTGGTTTGTACAGAACAGAAGCTTACAGCTGAGGCAAGCCGAGACAAAGCTTCGGCAAAACTGAACGAATTGTACTCTCAGCTAACATTAAGAGTAGGAGAAATCAAAGAAGAAGAATATAATGGAGGTGGGCAGACCCCGAGAATTGAGAGCGAAGGCCAAATGATCACAACGGAGAATCAGGGAAGAGTATTACCAAAGCCAACTCCAAGACATCCAAGACAACAGCGGAGAATAAGGCGTGAGAACTACATGAAGCTGGCTGCAAAAGTGAAACCATCTTATTTGCAACAAATAAAACTCTTTTTTGGAGGTGTTTGCCTCAGACCCAAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

330

Amino Acids

37.9

Weight (kDa)

9.0

Isoelectric Point (pI)

51.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WEMBL PF05701 18 - 251 1.4e-12 Weak chloroplast movement under blue light
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000339)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22590
fragaria_vesca FvH4_1g12660 FvH4_1g19380 FvH4_1g19390 FvH4_1g19400 FvH4_1g19402 FvH4_1g19420 FvH4_1g19450 FvH4_1g19460 FvH4_1g19464 FvH4_1g19480
malus_domestica MD01G1041000.v1.1 MD15G1310300.v1.1
prunus_persica Prupe.6G203500_v2.0.a1 Prupe.6G203700_v2.0.a1 Prupe.6G203800_v2.0.a1 Prupe.6G203900_v2.0.a1 Prupe.6G204000_v2.0.a1
pyrus_communis pycom01g06860
rosa_chinensis RchiOBHm_Chr2g0110741 RchiOBHm_Chr2g0110761 RchiOBHm_Chr2g0110781 RchiOBHm_Chr2g0110791 RchiOBHm_Chr2g0110831 RchiOBHm_Chr2g0110841 RchiOBHm_Chr2g0110861 RchiOBHm_Chr2g0110881 RchiOBHm_Chr2g0110901 RchiOBHm_Chr2g0110931 RchiOBHm_Chr2g0111531
rosa_laevigata RLG00000017837 RLG00000017838 RLG00000017839 RLG00000017840 RLG00000017842 RLG00000017843 RLG00000017844 RLG00000017845 RLG00000017846 RLG00000017848 RLG00000017850 RLG00000017854 RLG00000017897
rosa_multiflora Rmu_co8508665.1_g000001 Rmu_sc0003291.1_g000004 Rmu_sc0003291.1_g000015 Rmu_sc0003291.1_g000016 Rmu_sc0003291.1_g000023 Rmu_sc0003291.1_g000029 Rmu_sc0003291.1_g000032 Rmu_sc0003994.1_g000017 Rmu_sc0003994.1_g000019
rosa_roxburghii Rroxscaffold_2G00132240 Rroxscaffold_2G00132800 Rroxscaffold_2G00132810 Rroxscaffold_2G00132830 Rroxscaffold_2G00132850 Rroxscaffold_2G00132900 Rroxscaffold_2G00132930 Rroxscaffold_2G00132940 Rroxscaffold_2G00132950 Rroxscaffold_2G00132970
rosa_rugosa Rorug02G0169400.1 Rorug02G0169500 Rorug02G0169500 Rorug02G0169500 Rorug02G0169600 Rorug02G0169700 Rorug02G0169800 Rorug02G0169900 Rorug02G0170000 Rorug02G0170100 Rorug02G0170200 Rorug02G0174900
rosa_samantha Rh2BG231600 Rh2BG231800 Rh2BG232100 Rh2BG232400 Rh2BG232600 Rh2BG232800 Rh2BG233200 Rh2BG233400 Rh2BG233700 Rh2BG239500 Rh2CG224000 Rh2CG224300 Rh2CG224400 Rh2CG224700 Rh2CG224800 Rh2CG225000 Rh2CG225200 Rh2CG225300 Rh2DG227900 Rh2DG228000 Rh2DG228100 Rh2DG228800 Rh2DG228900 Rh2DG229200 Rh2DG229400 Rh2DG229600 Rh2DG229800 Rh2DG229900 Rh2DG230200
rosa_wichuraiana Rw2G017100 Rw2G017110 Rw2G017130 Rw2G017140 Rw2G017150 Rw2G017170 Rw2G017580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 445, 519, 883
AclWI GGATC 1 cut(s) 369
AcuI CTGAAG 1 cut(s) 524
AfaI GTAC 5 cut(s) 44, 545, 599, 664, 728
AflIII ACRYGT 1 cut(s) 368
AgsI TTSAA 2 cut(s) 40, 191
AjiI CACGTC 1 cut(s) 371
AjnI CCWGG 1 cut(s) 601
Alw21I GWGCWC 3 cut(s) 126, 146, 622
Alw26I GTCTC 3 cut(s) 392, 448, 690
AlwI GGATC 1 cut(s) 369
Ama87I CYCGRG 1 cut(s) 793
AoxI GGCC 3 cut(s) 205, 300, 811
ApeKI GCWGC 4 cut(s) 151, 472, 527, 917
Asp700I GAANNNNTTC 1 cut(s) 537
AsuHPI GGTGA 1 cut(s) 21
AvaI CYCGRG 1 cut(s) 793
BanII GRGCYC 2 cut(s) 126, 622
Bbv12I GWGCWC 3 cut(s) 126, 146, 622
BbvCI CCTCAGC 2 cut(s) 449, 684
BbvI GCAGC 4 cut(s) 163, 459, 539, 904
BccI CCATC 3 cut(s) 88, 302, 940
BcgI CGANNNNNNTGC 2 cut(s) 491, 525
BciT130I CCWGG 1 cut(s) 603
BclI TGATCA 2 cut(s) 105, 819
BcoDI GTCTC 3 cut(s) 392, 448, 690
BfaI CTAG 2 cut(s) 135, 161
BfmI CTRYAG 1 cut(s) 573
BisI GCNGC 6 cut(s) 152, 446, 473, 519, 528, 918
BlsI GCNGC 6 cut(s) 153, 447, 474, 520, 529, 919
Bme1390I CCNGG 1 cut(s) 603
BmeT110I CYCGRG 1 cut(s) 793
BmgBI CACGTC 1 cut(s) 371
BmrFI CCNGG 1 cut(s) 603
BmsI GCATC 6 cut(s) 268, 299, 396, 484, 499, 530
BplI GAGNNNNNCTC 2 cut(s) 445, 477
Bpu10I CCTNAGC 2 cut(s) 449, 684
BpuEI CTTGAG 2 cut(s) 110, 606
Bsa29I ATCGAT 1 cut(s) 339
BsaJI CCNNGG 2 cut(s) 114, 601
Bse1I ACTGG 2 cut(s) 226, 650
BseBI CCWGG 1 cut(s) 603
BseCI ATCGAT 1 cut(s) 339
BseDI CCNNGG 2 cut(s) 114, 601
BseGI GGATG 3 cut(s) 290, 514, 868
BseMII CTCAG 4 cut(s) 440, 675, 746, 991
BseNI ACTGG 2 cut(s) 226, 650
BseRI GAGGAG 1 cut(s) 466
BseXI GCAGC 4 cut(s) 163, 459, 539, 904
BshFI GGCC 3 cut(s) 207, 302, 813
BshVI ATCGAT 1 cut(s) 339
BsiHKAI GWGCWC 3 cut(s) 126, 146, 622
BsiHKCI CYCGRG 1 cut(s) 793
BslFI GGGAC 1 cut(s) 74
BsmAI GTCTC 3 cut(s) 392, 448, 690
BsmFI GGGAC 1 cut(s) 74
BsnI GGCC 3 cut(s) 207, 302, 813
BsoBI CYCGRG 1 cut(s) 793
Bsp1286I GDGCHC 3 cut(s) 126, 146, 622
Bsp1407I TGTACA 1 cut(s) 662
Bsp143I GATC 5 cut(s) 26, 105, 336, 361, 819
BspACI CCGC 3 cut(s) 445, 519, 883
BspANI GGCC 3 cut(s) 207, 302, 813
BspCNI CTCAG 4 cut(s) 441, 676, 745, 990
BspDI ATCGAT 1 cut(s) 339
BspPI GGATC 1 cut(s) 369
BspQI GCTCTTC 1 cut(s) 543
BsrGI TGTACA 1 cut(s) 662
BsrI ACTGG 2 cut(s) 226, 650
BssECI CCNNGG 2 cut(s) 114, 601
BssMI GATC 5 cut(s) 26, 105, 336, 361, 819
BssT1I CCWWGG 1 cut(s) 114
Bst2UI CCWGG 1 cut(s) 603
Bst4CI ACNGT 1 cut(s) 577
Bst6I CTCTTC 3 cut(s) 543, 588, 835
BstAPI GCANNNNNTGC 1 cut(s) 287
BstAUI TGTACA 1 cut(s) 662
BstC8I GCNNGC 2 cut(s) 691, 915
BstDEI CTNAG 5 cut(s) 90, 449, 684, 732, 977
BstF5I GGATG 3 cut(s) 290, 514, 868
BstKTI GATC 5 cut(s) 29, 108, 339, 364, 822
BstMAI GTCTC 3 cut(s) 392, 448, 690
BstMBI GATC 5 cut(s) 26, 105, 336, 361, 819
BstMWI GCNNNNNNNGC 7 cut(s) 157, 193, 287, 518, 524, 527, 533
BstNI CCWGG 1 cut(s) 603
BstNSI RCATGY 1 cut(s) 445
BstSCI CCNGG 1 cut(s) 601
BstSFI CTRYAG 1 cut(s) 573
BstV1I GCAGC 4 cut(s) 163, 459, 539, 904
Bsu15I ATCGAT 1 cut(s) 339
BsuRI GGCC 3 cut(s) 207, 302, 813
BsuTUI ATCGAT 1 cut(s) 339
BtrI CACGTC 1 cut(s) 371
BtsCI GGATG 3 cut(s) 290, 514, 868
BtsIMutI CAGTG 1 cut(s) 233
Cac8I GCNNGC 2 cut(s) 691, 915
ClaI ATCGAT 1 cut(s) 339
Csp6I GTAC 5 cut(s) 43, 544, 598, 663, 727
CviAII CATG 6 cut(s) 148, 287, 334, 442, 547, 907
CviQI GTAC 5 cut(s) 43, 544, 598, 663, 727
DdeI CTNAG 5 cut(s) 90, 449, 684, 732, 977
DpnI GATC 5 cut(s) 28, 107, 338, 363, 821
DpnII GATC 5 cut(s) 26, 105, 336, 361, 819
Eam1104I CTCTTC 3 cut(s) 543, 588, 835
EarI CTCTTC 3 cut(s) 543, 588, 835
Ecl136II GAGCTC 2 cut(s) 124, 620
Eco130I CCWWGG 1 cut(s) 114
Eco24I GRGCYC 2 cut(s) 126, 622
Eco32I GATATC 1 cut(s) 255
Eco53kI GAGCTC 2 cut(s) 124, 620
Eco57I CTGAAG 1 cut(s) 524
Eco88I CYCGRG 1 cut(s) 793
EcoICRI GAGCTC 2 cut(s) 124, 620
EcoRII CCWGG 1 cut(s) 601
EcoRV GATATC 1 cut(s) 255
EcoT14I CCWWGG 1 cut(s) 114
EcoT22I ATGCAT 1 cut(s) 292
EcoT38I GRGCYC 2 cut(s) 126, 622
ErhI CCWWGG 1 cut(s) 114
FaeI CATG 6 cut(s) 151, 290, 337, 445, 550, 910
FaqI GGGAC 1 cut(s) 74
FatI CATG 6 cut(s) 147, 286, 333, 441, 546, 906
FauNDI CATATG 1 cut(s) 13
FbaI TGATCA 2 cut(s) 105, 819
Fnu4HI GCNGC 6 cut(s) 152, 446, 473, 519, 528, 918
FokI GGATG 3 cut(s) 277, 521, 855
FriOI GRGCYC 2 cut(s) 126, 622
Fsp4HI GCNGC 6 cut(s) 152, 446, 473, 519, 528, 918
FspBI CTAG 2 cut(s) 135, 161
GluI GCNGC 6 cut(s) 152, 446, 473, 519, 528, 918
HaeIII GGCC 3 cut(s) 207, 302, 813
Hin1II CATG 6 cut(s) 151, 290, 337, 445, 550, 910
HincII GTYRAC 1 cut(s) 580
HindII GTYRAC 1 cut(s) 580
HindIII AAGCTT 2 cut(s) 674, 702
HinfI GANTC 6 cut(s) 5, 20, 164, 460, 498, 832
HphI GGTGA 1 cut(s) 21
Hpy166II GTNNAC 1 cut(s) 580
Hpy188I TCNGA 4 cut(s) 259, 559, 643, 980
Hpy188III TCNNGA 4 cut(s) 24, 127, 374, 623
Hpy8I GTNNAC 1 cut(s) 580
Hpy99I CGWCG 2 cut(s) 185, 375
HpyAV CCTTC 1 cut(s) 803
HpyCH4III ACNGT 1 cut(s) 577
HpyCH4IV ACGT 1 cut(s) 370
HpyCH4V TGCA 7 cut(s) 151, 212, 281, 290, 475, 920, 943
HpyF10VI GCNNNNNNNGC 7 cut(s) 157, 193, 287, 518, 524, 527, 533
HpyF3I CTNAG 5 cut(s) 90, 449, 684, 732, 977
HpySE526I ACGT 1 cut(s) 370
Hsp92II CATG 6 cut(s) 151, 290, 337, 445, 550, 910
Ksp22I TGATCA 2 cut(s) 105, 819
Kzo9I GATC 5 cut(s) 26, 105, 336, 361, 819
LguI GCTCTTC 1 cut(s) 543
LpnPI CCDG 8 cut(s) 189, 239, 338, 588, 615, 631, 821, 899
Lsp1109I GCAGC 4 cut(s) 163, 459, 539, 904
LweI GCATC 6 cut(s) 268, 299, 396, 484, 499, 530
MaeI CTAG 2 cut(s) 135, 161
MaeII ACGT 1 cut(s) 370
MalI GATC 5 cut(s) 28, 107, 338, 363, 821
MboI GATC 5 cut(s) 26, 105, 336, 361, 819
MboII GAAGA 6 cut(s) 419, 530, 605, 776, 779, 852
MhlI GDGCHC 3 cut(s) 126, 146, 622
MluCI AATT 4 cut(s) 568, 722, 798, 988
MlyI GAGTC 4 cut(s) 14, 29, 158, 454
MnlI CCTC 7 cut(s) 183, 304, 444, 679, 773, 959, 986
Mph1103I ATGCAT 1 cut(s) 292
MroXI GAANNNNTTC 1 cut(s) 537
MseI TTAA 2 cut(s) 743, 991
MspA1I CMGCKG 2 cut(s) 683, 883
MspR9I CCNGG 1 cut(s) 603
MvaI CCWGG 1 cut(s) 603
MwoI GCNNNNNNNGC 7 cut(s) 157, 193, 287, 518, 524, 527, 533
NdeI CATATG 1 cut(s) 13
NdeII GATC 5 cut(s) 26, 105, 336, 361, 819
NlaIII CATG 6 cut(s) 151, 290, 337, 445, 550, 910
NmeAIII GCCGAG 1 cut(s) 719
NsiI ATGCAT 1 cut(s) 292
NspI RCATGY 1 cut(s) 445
PciSI GCTCTTC 1 cut(s) 543
PdmI GAANNNNTTC 1 cut(s) 537
PfeI GAWTC 2 cut(s) 498, 832
PkrI GCNGC 6 cut(s) 153, 447, 474, 520, 529, 919
PleI GAGTC 4 cut(s) 13, 28, 158, 454
PpsI GAGTC 4 cut(s) 13, 28, 158, 454
Psp124BI GAGCTC 2 cut(s) 126, 622
Psp6I CCWGG 1 cut(s) 601
PspGI CCWGG 1 cut(s) 601
PsrI GAACNNNNNNTAC 2 cut(s) 710, 742
PvuII CAGCTG 1 cut(s) 683
RsaI GTAC 5 cut(s) 44, 545, 599, 664, 728
RsaNI GTAC 5 cut(s) 43, 544, 598, 663, 727
SacI GAGCTC 2 cut(s) 126, 622
SapI GCTCTTC 1 cut(s) 543
SaqAI TTAA 2 cut(s) 743, 991
SatI GCNGC 6 cut(s) 152, 446, 473, 519, 528, 918
Sau3AI GATC 5 cut(s) 26, 105, 336, 361, 819
SchI GAGTC 4 cut(s) 14, 29, 158, 454
ScrFI CCNGG 1 cut(s) 603
SduI GDGCHC 3 cut(s) 126, 146, 622
SfaNI GCATC 6 cut(s) 268, 299, 396, 484, 499, 530
SfcI CTRYAG 1 cut(s) 573
SmlI CTYRAG 2 cut(s) 125, 621
SmoI CTYRAG 2 cut(s) 125, 621
Sse9I AATT 4 cut(s) 568, 722, 798, 988
SsiI CCGC 3 cut(s) 445, 519, 883
SspMI CTAG 2 cut(s) 135, 161
SstI GAGCTC 2 cut(s) 126, 622
StyD4I CCNGG 1 cut(s) 601
StyI CCWWGG 1 cut(s) 114
TaaI ACNGT 1 cut(s) 577
TaiI ACGT 1 cut(s) 373
TaqI TCGA 6 cut(s) 180, 276, 339, 373, 487, 501
TasI AATT 4 cut(s) 568, 722, 798, 988
TatI WGTACW 4 cut(s) 42, 543, 662, 726
TauI GCSGC 2 cut(s) 448, 521
TfiI GAWTC 2 cut(s) 498, 832
Tru1I TTAA 2 cut(s) 743, 991
Tru9I TTAA 2 cut(s) 743, 991
TscAI CASTG 1 cut(s) 233
TseI GCWGC 4 cut(s) 151, 472, 527, 917
TspDTI ATGAA 5 cut(s) 357, 420, 563, 626, 923
TspGWI ACGGA 2 cut(s) 427, 842
TspRI CASTG 1 cut(s) 233
XceI RCATGY 1 cut(s) 445
XmnI GAANNNNTTC 1 cut(s) 537
XspI CTAG 2 cut(s) 135, 161
Zsp2I ATGCAT 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.