FvH4_1g19464

UDP-glycosyltransferase 91A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000339
Physical Location & Seq
Reverse (-)
11734804 .. 11735267
464 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g19464.t1

Sequence Viewer

Length: 399 bp
ATGGTGTGCAGGAGTTGGGTTCCACAGCTGAAGATTCTAGCACATGACTCGTTCGGTGTGTTTCTCAGTCACTCTGGTTGGAGCTCGGTGGTGGAGGCGTTGACATTTGGAAGACCATTGGTGCTGTTGCCTATGTCGAATGACCAGGGACTTAATGCGAGGTATTTCACGGAAAAGAAGGTGGGTTATGAGTTGCCGAGGGACAAGCAAGACGGGTCGTTTACGAGTGAGGCGGTGGCGGAGTCGCTGAGGATGGTGATAGAGAAAGAGGAGGGGAAGGTTTACAGGGAGAAGGCCAAGGAGTTGAAGCTGTTGATTGGAGATAGGGAGAGGCAAAATGTGTATGTGAATAAGTTTTTGGAGTACCTCACAACCCACAAAAAATGTCGTTCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

133

Amino Acids

15.17

Weight (kDa)

9.1

Isoelectric Point (pI)

40.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 5 - 127 7.6e-15 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 6 - 102 2.5e-06 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Glyco_tran_28_C PF04101 20 - 92 6.2e-07 Glycosyltransferase family 28 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000339)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22590
fragaria_vesca FvH4_1g12660 FvH4_1g19380 FvH4_1g19390 FvH4_1g19400 FvH4_1g19402 FvH4_1g19420 FvH4_1g19450 FvH4_1g19460 FvH4_1g19464 FvH4_1g19480
malus_domestica MD01G1041000.v1.1 MD15G1310300.v1.1
prunus_persica Prupe.6G203500_v2.0.a1 Prupe.6G203700_v2.0.a1 Prupe.6G203800_v2.0.a1 Prupe.6G203900_v2.0.a1 Prupe.6G204000_v2.0.a1
pyrus_communis pycom01g06860
rosa_chinensis RchiOBHm_Chr2g0110741 RchiOBHm_Chr2g0110761 RchiOBHm_Chr2g0110781 RchiOBHm_Chr2g0110791 RchiOBHm_Chr2g0110831 RchiOBHm_Chr2g0110841 RchiOBHm_Chr2g0110861 RchiOBHm_Chr2g0110881 RchiOBHm_Chr2g0110901 RchiOBHm_Chr2g0110931 RchiOBHm_Chr2g0111531
rosa_laevigata RLG00000017837 RLG00000017838 RLG00000017839 RLG00000017840 RLG00000017842 RLG00000017843 RLG00000017844 RLG00000017845 RLG00000017846 RLG00000017848 RLG00000017850 RLG00000017854 RLG00000017897
rosa_multiflora Rmu_co8508665.1_g000001 Rmu_sc0003291.1_g000004 Rmu_sc0003291.1_g000015 Rmu_sc0003291.1_g000016 Rmu_sc0003291.1_g000023 Rmu_sc0003291.1_g000029 Rmu_sc0003291.1_g000032 Rmu_sc0003994.1_g000017 Rmu_sc0003994.1_g000019
rosa_roxburghii Rroxscaffold_2G00132240 Rroxscaffold_2G00132800 Rroxscaffold_2G00132810 Rroxscaffold_2G00132830 Rroxscaffold_2G00132850 Rroxscaffold_2G00132900 Rroxscaffold_2G00132930 Rroxscaffold_2G00132940 Rroxscaffold_2G00132950 Rroxscaffold_2G00132970
rosa_rugosa Rorug02G0169400.1 Rorug02G0169500 Rorug02G0169500 Rorug02G0169500 Rorug02G0169600 Rorug02G0169700 Rorug02G0169800 Rorug02G0169900 Rorug02G0170000 Rorug02G0170100 Rorug02G0170200 Rorug02G0174900
rosa_samantha Rh2BG231600 Rh2BG231800 Rh2BG232100 Rh2BG232400 Rh2BG232600 Rh2BG232800 Rh2BG233200 Rh2BG233400 Rh2BG233700 Rh2BG239500 Rh2CG224000 Rh2CG224300 Rh2CG224400 Rh2CG224700 Rh2CG224800 Rh2CG225000 Rh2CG225200 Rh2CG225300 Rh2DG227900 Rh2DG228000 Rh2DG228100 Rh2DG228800 Rh2DG228900 Rh2DG229200 Rh2DG229400 Rh2DG229600 Rh2DG229800 Rh2DG229900 Rh2DG230200
rosa_wichuraiana Rw2G017100 Rw2G017110 Rw2G017130 Rw2G017140 Rw2G017150 Rw2G017170 Rw2G017580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 233, 239
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 1 cut(s) 365
AgsI TTSAA 1 cut(s) 307
AjnI CCWGG 1 cut(s) 144
AjuI GAANNNNNNNTTGG 2 cut(s) 341, 373
AluBI AGCT 3 cut(s) 28, 84, 310
AluI AGCT 3 cut(s) 28, 84, 310
Alw21I GWGCWC 1 cut(s) 86
AoxI GGCC 1 cut(s) 294
AsuHPI GGTGA 1 cut(s) 268
BanII GRGCYC 1 cut(s) 86
BbsI GAAGAC 1 cut(s) 118
Bbv12I GWGCWC 1 cut(s) 86
BbvCI CCTCAGC 1 cut(s) 248
BccI CCATC 1 cut(s) 247
BcgI CGANNNNNNTGC 2 cut(s) 30, 64
BciT130I CCWGG 1 cut(s) 146
BfaI CTAG 1 cut(s) 38
Bme1390I CCNGG 1 cut(s) 146
BmiI GGNNCC 1 cut(s) 21
BmrFI CCNGG 1 cut(s) 146
BpiI GAAGAC 1 cut(s) 118
Bpu10I CCTNAGC 1 cut(s) 248
BsaJI CCNNGG 3 cut(s) 145, 197, 297
BseBI CCWGG 1 cut(s) 146
BseDI CCNNGG 3 cut(s) 145, 197, 297
BseGI GGATG 1 cut(s) 258
BseMII CTCAG 2 cut(s) 79, 239
BseRI GAGGAG 1 cut(s) 284
BsgI GTGCAG 1 cut(s) 28
BshFI GGCC 1 cut(s) 296
BsiHKAI GWGCWC 1 cut(s) 86
BslFI GGGAC 2 cut(s) 162, 215
BsmFI GGGAC 2 cut(s) 162, 215
BsnI GGCC 1 cut(s) 296
Bsp1286I GDGCHC 1 cut(s) 86
BspACI CCGC 2 cut(s) 233, 239
BspANI GGCC 1 cut(s) 296
BspCNI CTCAG 2 cut(s) 78, 240
BspLI GGNNCC 1 cut(s) 21
BssECI CCNNGG 3 cut(s) 145, 197, 297
BssT1I CCWWGG 1 cut(s) 297
Bst2UI CCWGG 1 cut(s) 146
BstDEI CTNAG 2 cut(s) 65, 248
BstF5I GGATG 1 cut(s) 258
BstNI CCWGG 1 cut(s) 146
BstSCI CCNGG 1 cut(s) 144
BstV2I GAAGAC 1 cut(s) 118
BsuRI GGCC 1 cut(s) 296
BtsCI GGATG 1 cut(s) 258
Csp6I GTAC 1 cut(s) 364
CviAII CATG 2 cut(s) 44, 396
CviJI RGCY 4 cut(s) 28, 84, 296, 310
CviKI_1 RGCY 4 cut(s) 28, 84, 296, 310
CviQI GTAC 1 cut(s) 364
DdeI CTNAG 2 cut(s) 65, 248
EciI GGCGGA 1 cut(s) 254
Ecl136II GAGCTC 1 cut(s) 84
Eco130I CCWWGG 1 cut(s) 297
Eco24I GRGCYC 1 cut(s) 86
Eco53kI GAGCTC 1 cut(s) 84
Eco57I CTGAAG 1 cut(s) 50
EcoICRI GAGCTC 1 cut(s) 84
EcoRII CCWGG 1 cut(s) 144
EcoT14I CCWWGG 1 cut(s) 297
EcoT38I GRGCYC 1 cut(s) 86
ErhI CCWWGG 1 cut(s) 297
FaeI CATG 2 cut(s) 47, 399
FaiI YATR 5 cut(s) 45, 134, 189, 345, 397
FaqI GGGAC 2 cut(s) 162, 215
FatI CATG 2 cut(s) 43, 395
FokI GGATG 1 cut(s) 265
FriOI GRGCYC 1 cut(s) 86
FspBI CTAG 1 cut(s) 38
HaeIII GGCC 1 cut(s) 296
Hin1II CATG 2 cut(s) 47, 399
HincII GTYRAC 1 cut(s) 102
HindII GTYRAC 1 cut(s) 102
HinfI GANTC 3 cut(s) 34, 47, 242
HphI GGTGA 1 cut(s) 268
Hpy166II GTNNAC 3 cut(s) 102, 222, 283
Hpy8I GTNNAC 3 cut(s) 102, 222, 283
HpyAV CCTTC 3 cut(s) 172, 271, 286
HpyCH4V TGCA 1 cut(s) 9
HpyF3I CTNAG 2 cut(s) 65, 248
Hsp92II CATG 2 cut(s) 47, 399
LmnI GCTCC 1 cut(s) 81
LpnPI CCDG 4 cut(s) 60, 131, 158, 271
MaeI CTAG 1 cut(s) 38
MaeIII GTNAC 1 cut(s) 68
MboII GAAGA 2 cut(s) 43, 123
MhlI GDGCHC 1 cut(s) 86
MlyI GAGTC 2 cut(s) 41, 251
MmeI TCCRAC 1 cut(s) 59
MnlI CCTC 9 cut(s) 88, 153, 192, 223, 243, 262, 265, 324, 377
MseI TTAA 1 cut(s) 153
MspA1I CMGCKG 1 cut(s) 28
MspR9I CCNGG 1 cut(s) 146
MvaI CCWGG 1 cut(s) 146
NlaIII CATG 2 cut(s) 47, 399
NlaIV GGNNCC 1 cut(s) 21
NmeAIII GCCGAG 1 cut(s) 222
NmuCI GTSAC 1 cut(s) 68
PfeI GAWTC 1 cut(s) 34
PleI GAGTC 2 cut(s) 41, 250
PpsI GAGTC 2 cut(s) 41, 250
Psp124BI GAGCTC 1 cut(s) 86
Psp6I CCWGG 1 cut(s) 144
PspGI CCWGG 1 cut(s) 144
PspN4I GGNNCC 1 cut(s) 21
PvuII CAGCTG 1 cut(s) 28
RsaI GTAC 1 cut(s) 365
RsaNI GTAC 1 cut(s) 364
SacI GAGCTC 1 cut(s) 86
SaqAI TTAA 1 cut(s) 153
SchI GAGTC 2 cut(s) 41, 251
ScrFI CCNGG 1 cut(s) 146
SduI GDGCHC 1 cut(s) 86
SetI ASST 7 cut(s) 30, 86, 164, 183, 282, 312, 369
SsiI CCGC 2 cut(s) 233, 239
SspMI CTAG 1 cut(s) 38
SstI GAGCTC 1 cut(s) 86
StyD4I CCNGG 1 cut(s) 144
StyI CCWWGG 1 cut(s) 297
TaqI TCGA 1 cut(s) 137
TfiI GAWTC 1 cut(s) 34
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TseFI GTSAC 1 cut(s) 68
Tsp45I GTSAC 1 cut(s) 68
TspGWI ACGGA 1 cut(s) 185
XspI CTAG 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.