Rh2BG233700

UDP-glycosyltransferase 91A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000339
Physical Location & Seq
Reverse (-)
23256807 .. 23263577
6771 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG233700.1

Sequence Viewer

Length: 939 bp
ATGGAGTACTCCATCACTGTCCCCCCCACCATGGCCAACAATAACAAAGACAGTAAGCTTCACATAGCCATGTTCCCATGGCTAGCCTTTGGCCACATGATCCCATATCTCGAATTCGCCAAGCTGATCGCCGGAAAAGGCCACAAAATCTCATTCATCTCCACCCCACGAAACATTTATCGCCTCCCCCCTCTCCCGCCAAACCTCTCCACCCTAATCACCTTTGTGAAGCTTGCACTGCCTGAGAATCCGAACCTTCCAGAAGGTGCCGAGGCCACCGCGGACTTACCCGAAGACCAAGTCCCGCATCTCAAGATAGCCTACGACTCTCTTCAAGAACCGATCACCCAATTCCTCAAGACTTCAAAACCGGATTGGCTACTCTTCGACTTCGCCCCTTACTGGGTACCAGAGATAGCCCAAACTCTCGGGATTCCGACCGCCTTCTTCAGCATTATGATAGCCGCCGTTTTGTCCTTCCTCGGGCCCACATCGCCTGGAATTCCTCCTGATGACCGTAAGGTACCGGAGGATTACGTAGTCCCGCCCAAGTGGGTGCCATTTTCAGCCACCGTGTGCTTGAGGTTGTTTGAGGTGCTTTGGCTCTTTAAAGAAATAACCGGAGACGAAACAAACGTCTCGGTCGTGTATCGGTTCATGGAAACACTGCGAGGCTACGACTTGATCGCTGGGTTGAATGCGAGGTATTTCGGGGAGAAGAAGGTCGGATATGAGTTGCCGAGGGATGAACAAGACGGGTCGTTTACGAGTGAGGCGGTGGTGGAGTCGCTGAGGATGATAGAGAAGGAGGAGGGGAGGGTTTACAGGGACAAAGCCAAGGAGTTGAAGCCGTTGTTTGGAGACAGGGAGAGGCAAAATGTGTACGTGGATAAGTTTTTGGAGTACCTTACAACCCACAGAGGATGTAGAACGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

312

Amino Acids

35.54

Weight (kDa)

5.53

Isoelectric Point (pI)

34.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000339)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22590
fragaria_vesca FvH4_1g12660 FvH4_1g19380 FvH4_1g19390 FvH4_1g19400 FvH4_1g19402 FvH4_1g19420 FvH4_1g19450 FvH4_1g19460 FvH4_1g19464 FvH4_1g19480
malus_domestica MD01G1041000.v1.1 MD15G1310300.v1.1
prunus_persica Prupe.6G203500_v2.0.a1 Prupe.6G203700_v2.0.a1 Prupe.6G203800_v2.0.a1 Prupe.6G203900_v2.0.a1 Prupe.6G204000_v2.0.a1
pyrus_communis pycom01g06860
rosa_chinensis RchiOBHm_Chr2g0110741 RchiOBHm_Chr2g0110761 RchiOBHm_Chr2g0110781 RchiOBHm_Chr2g0110791 RchiOBHm_Chr2g0110831 RchiOBHm_Chr2g0110841 RchiOBHm_Chr2g0110861 RchiOBHm_Chr2g0110881 RchiOBHm_Chr2g0110901 RchiOBHm_Chr2g0110931 RchiOBHm_Chr2g0111531
rosa_laevigata RLG00000017837 RLG00000017838 RLG00000017839 RLG00000017840 RLG00000017842 RLG00000017843 RLG00000017844 RLG00000017845 RLG00000017846 RLG00000017848 RLG00000017850 RLG00000017854 RLG00000017897
rosa_multiflora Rmu_co8508665.1_g000001 Rmu_sc0003291.1_g000004 Rmu_sc0003291.1_g000015 Rmu_sc0003291.1_g000016 Rmu_sc0003291.1_g000023 Rmu_sc0003291.1_g000029 Rmu_sc0003291.1_g000032 Rmu_sc0003994.1_g000017 Rmu_sc0003994.1_g000019
rosa_roxburghii Rroxscaffold_2G00132240 Rroxscaffold_2G00132800 Rroxscaffold_2G00132810 Rroxscaffold_2G00132830 Rroxscaffold_2G00132850 Rroxscaffold_2G00132900 Rroxscaffold_2G00132930 Rroxscaffold_2G00132940 Rroxscaffold_2G00132950 Rroxscaffold_2G00132970
rosa_rugosa Rorug02G0169400.1 Rorug02G0169500 Rorug02G0169500 Rorug02G0169500 Rorug02G0169600 Rorug02G0169700 Rorug02G0169800 Rorug02G0169900 Rorug02G0170000 Rorug02G0170100 Rorug02G0170200 Rorug02G0174900
rosa_samantha Rh2BG231600 Rh2BG231800 Rh2BG232100 Rh2BG232400 Rh2BG232600 Rh2BG232800 Rh2BG233200 Rh2BG233400 Rh2BG233700 Rh2BG239500 Rh2CG224000 Rh2CG224300 Rh2CG224400 Rh2CG224700 Rh2CG224800 Rh2CG225000 Rh2CG225200 Rh2CG225300 Rh2DG227900 Rh2DG228000 Rh2DG228100 Rh2DG228800 Rh2DG228900 Rh2DG229200 Rh2DG229400 Rh2DG229600 Rh2DG229800 Rh2DG229900 Rh2DG230200
rosa_wichuraiana Rw2G017100 Rw2G017110 Rw2G017130 Rw2G017140 Rw2G017150 Rw2G017170 Rw2G017580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 406, 523
AccB1I GGYRCC 4 cut(s) 266, 406, 523, 556
AccII CGCG 1 cut(s) 281
AciI CCGC 8 cut(s) 197, 279, 281, 305, 441, 465, 545, 776
AclWI GGATC 1 cut(s) 94
AcoI YGGCCR 2 cut(s) 33, 91
AcsI RAATTY 2 cut(s) 113, 501
AcuI CTGAAG 1 cut(s) 433
AdeI CACNNNGTG 1 cut(s) 576
AfaI GTAC 5 cut(s) 8, 408, 525, 884, 905
AfiI CCNNNNNNNGG 5 cut(s) 31, 402, 403, 483, 857
AgsI TTSAA 4 cut(s) 335, 366, 697, 847
AjnI CCWGG 1 cut(s) 496
AleI CACNNNNGTG 1 cut(s) 224
AluBI AGCT 3 cut(s) 58, 124, 232
AluI AGCT 3 cut(s) 58, 124, 232
Alw26I GTCTC 3 cut(s) 618, 643, 855
AlwI GGATC 1 cut(s) 94
Ama87I CYCGRG 2 cut(s) 428, 482
AoxI GGCC 5 cut(s) 33, 91, 139, 273, 485
ApaI GGGCCC 1 cut(s) 489
ApoI RAATTY 2 cut(s) 113, 501
ArsI GACNNNNNNTTYG 4 cut(s) 285, 317, 621, 653
Asp718I GGTACC 2 cut(s) 406, 523
AspS9I GGNCC 2 cut(s) 485, 486
AsuHPI GGTGA 2 cut(s) 211, 337
AsuNHI GCTAGC 1 cut(s) 82
AvaI CYCGRG 2 cut(s) 428, 482
BaeGI GKGCMC 1 cut(s) 489
BalI TGGCCA 2 cut(s) 35, 93
BanI GGYRCC 4 cut(s) 266, 406, 523, 556
BanII GRGCYC 1 cut(s) 489
BbsI GAAGAC 1 cut(s) 300
BbvCI CCTCAGC 1 cut(s) 791
BccI CCATC 1 cut(s) 20
BceAI ACGGC 2 cut(s) 452, 835
BciT130I CCWGG 1 cut(s) 498
BcoDI GTCTC 3 cut(s) 618, 643, 855
BfaI CTAG 1 cut(s) 83
BisI GCNGC 1 cut(s) 465
BlsI GCNGC 1 cut(s) 466
BmcAI AGTACT 1 cut(s) 8
Bme1390I CCNGG 1 cut(s) 498
BmeT110I CYCGRG 2 cut(s) 428, 482
BmgT120I GGNCC 2 cut(s) 485, 486
BmiI GGNNCC 5 cut(s) 268, 408, 487, 525, 558
BmrFI CCNGG 1 cut(s) 498
BmrI ACTGGG 1 cut(s) 412
BmsI GCATC 1 cut(s) 316
BmtI GCTAGC 1 cut(s) 86
BmuI ACTGGG 1 cut(s) 412
BpiI GAAGAC 1 cut(s) 300
Bpu10I CCTNAGC 1 cut(s) 791
BpuEI CTTGAG 3 cut(s) 296, 341, 601
BsaAI YACGTR 2 cut(s) 538, 886
BsaJI CCNNGG 7 cut(s) 30, 77, 270, 279, 481, 740, 837
BsaWI WCCGGW 3 cut(s) 370, 526, 620
Bsc4I CCNNNNNNNGG 5 cut(s) 31, 402, 403, 483, 857
Bse1I ACTGG 1 cut(s) 407
BseBI CCWGG 1 cut(s) 498
BseDI CCNNGG 7 cut(s) 30, 77, 270, 279, 481, 740, 837
BseGI GGATG 3 cut(s) 751, 801, 929
BseLI CCNNNNNNNGG 5 cut(s) 31, 402, 403, 483, 857
BseMII CTCAG 2 cut(s) 234, 782
BseNI ACTGG 1 cut(s) 407
BseRI GAGGAG 1 cut(s) 824
BseSI GKGCMC 1 cut(s) 489
BseYI CCCAGC 1 cut(s) 689
Bsh1236I CGCG 1 cut(s) 281
Bsh1285I CGRYCG 2 cut(s) 441, 645
BshFI GGCC 5 cut(s) 35, 93, 141, 275, 487
BshNI GGYRCC 4 cut(s) 266, 406, 523, 556
BsiEI CGRYCG 2 cut(s) 441, 645
BsiHKCI CYCGRG 2 cut(s) 428, 482
BsiSI CCGG 4 cut(s) 132, 371, 527, 621
BslFI GGGAC 4 cut(s) 5, 287, 527, 842
BslI CCNNNNNNNGG 5 cut(s) 31, 402, 403, 483, 857
BsmAI GTCTC 3 cut(s) 618, 643, 855
BsmBI CGTCTC 2 cut(s) 618, 643
BsmFI GGGAC 4 cut(s) 5, 287, 527, 842
BsmI GAATGC 1 cut(s) 703
BsnI GGCC 5 cut(s) 35, 93, 141, 275, 487
BsoBI CYCGRG 2 cut(s) 428, 482
Bsp120I GGGCCC 1 cut(s) 485
Bsp1286I GDGCHC 1 cut(s) 489
Bsp143I GATC 4 cut(s) 99, 126, 342, 684
Bsp19I CCATGG 2 cut(s) 30, 77
BspACI CCGC 8 cut(s) 197, 279, 281, 305, 441, 465, 545, 776
BspANI GGCC 5 cut(s) 35, 93, 141, 275, 487
BspCNI CTCAG 2 cut(s) 235, 783
BspFNI CGCG 1 cut(s) 281
BspLI GGNNCC 5 cut(s) 268, 408, 487, 525, 558
BspOI GCTAGC 1 cut(s) 86
BspPI GGATC 1 cut(s) 94
BspT107I GGYRCC 4 cut(s) 266, 406, 523, 556
BsrI ACTGG 1 cut(s) 407
BssECI CCNNGG 7 cut(s) 30, 77, 270, 279, 481, 740, 837
BssMI GATC 4 cut(s) 99, 126, 342, 684
BssT1I CCWWGG 3 cut(s) 30, 77, 837
Bst2UI CCWGG 1 cut(s) 498
Bst4CI ACNGT 4 cut(s) 19, 53, 518, 574
Bst6I CTCTTC 2 cut(s) 336, 389
BstBAI YACGTR 2 cut(s) 538, 886
BstC8I GCNNGC 2 cut(s) 84, 234
BstDEI CTNAG 2 cut(s) 243, 791
BstDSI CCRYGG 3 cut(s) 30, 77, 279
BstF5I GGATG 3 cut(s) 751, 801, 929
BstFNI CGCG 1 cut(s) 281
BstKTI GATC 4 cut(s) 102, 129, 345, 687
BstMAI GTCTC 3 cut(s) 618, 643, 855
BstMBI GATC 4 cut(s) 99, 126, 342, 684
BstMCI CGRYCG 2 cut(s) 441, 645
BstMWI GCNNNNNNNGC 2 cut(s) 238, 493
BstNI CCWGG 1 cut(s) 498
BstSCI CCNGG 1 cut(s) 496
BstSLI GKGCMC 1 cut(s) 489
BstSNI TACGTA 1 cut(s) 538
BstUI CGCG 1 cut(s) 281
BstV2I GAAGAC 1 cut(s) 300
BsuRI GGCC 5 cut(s) 35, 93, 141, 275, 487
BtgI CCRYGG 3 cut(s) 30, 77, 279
BtgZI GCGATG 1 cut(s) 477
BtsCI GGATG 3 cut(s) 751, 801, 929
BtsI GCAGTG 2 cut(s) 236, 665
BtsIMutI CAGTG 3 cut(s) 15, 236, 665
Cac8I GCNNGC 2 cut(s) 84, 234
Cfr13I GGNCC 2 cut(s) 485, 486
Cfr42I CCGCGG 1 cut(s) 282
Csp6I GTAC 5 cut(s) 7, 407, 524, 883, 904
CviAII CATG 6 cut(s) 31, 70, 78, 97, 658, 936
CviQI GTAC 5 cut(s) 7, 407, 524, 883, 904
DdeI CTNAG 2 cut(s) 243, 791
DpnI GATC 4 cut(s) 101, 128, 344, 686
DpnII GATC 4 cut(s) 99, 126, 342, 684
DraI TTTAAA 1 cut(s) 610
DraIII CACNNNGTG 1 cut(s) 576
EaeI YGGCCR 2 cut(s) 33, 91
Eam1104I CTCTTC 2 cut(s) 336, 389
EarI CTCTTC 2 cut(s) 336, 389
Eco105I TACGTA 1 cut(s) 538
Eco130I CCWWGG 3 cut(s) 30, 77, 837
Eco24I GRGCYC 1 cut(s) 489
Eco57I CTGAAG 1 cut(s) 433
Eco88I CYCGRG 2 cut(s) 428, 482
EcoRI GAATTC 2 cut(s) 113, 501
EcoRII CCWGG 1 cut(s) 496
EcoT14I CCWWGG 3 cut(s) 30, 77, 837
EcoT38I GRGCYC 1 cut(s) 489
ErhI CCWWGG 3 cut(s) 30, 77, 837
Esp3I CGTCTC 2 cut(s) 618, 643
FaeI CATG 6 cut(s) 34, 73, 81, 100, 661, 939
FaqI GGGAC 4 cut(s) 5, 287, 527, 842
FatI CATG 6 cut(s) 30, 69, 77, 96, 657, 935
FauI CCCGC 3 cut(s) 204, 312, 552
Fnu4HI GCNGC 1 cut(s) 465
FokI GGATG 2 cut(s) 758, 808
FriOI GRGCYC 1 cut(s) 489
Fsp4HI GCNGC 1 cut(s) 465
FspBI CTAG 1 cut(s) 83
GluI GCNGC 1 cut(s) 465
GsaI CCCAGC 1 cut(s) 693
HaeIII GGCC 5 cut(s) 35, 93, 141, 275, 487
HapII CCGG 4 cut(s) 132, 371, 527, 621
Hin1II CATG 6 cut(s) 34, 73, 81, 100, 661, 939
HindIII AAGCTT 2 cut(s) 56, 230
HinfI GANTC 4 cut(s) 247, 326, 433, 785
HpaII CCGG 4 cut(s) 132, 371, 527, 621
HphI GGTGA 2 cut(s) 211, 337
Hpy166II GTNNAC 3 cut(s) 765, 823, 883
Hpy188I TCNGA 3 cut(s) 252, 438, 728
Hpy188III TCNNGA 7 cut(s) 110, 260, 313, 335, 358, 430, 509
Hpy8I GTNNAC 3 cut(s) 765, 823, 883
HpyAV CCTTC 6 cut(s) 257, 266, 454, 487, 715, 799
HpyCH4III ACNGT 4 cut(s) 19, 53, 518, 574
HpyCH4IV ACGT 3 cut(s) 537, 636, 885
HpyCH4V TGCA 1 cut(s) 236
HpyF10VI GCNNNNNNNGC 2 cut(s) 238, 493
HpyF3I CTNAG 2 cut(s) 243, 791
HpySE526I ACGT 3 cut(s) 537, 636, 885
Hsp92II CATG 6 cut(s) 34, 73, 81, 100, 661, 939
KpnI GGTACC 2 cut(s) 410, 527
KspI CCGCGG 1 cut(s) 282
Kzo9I GATC 4 cut(s) 99, 126, 342, 684
LweI GCATC 1 cut(s) 316
MaeI CTAG 1 cut(s) 83
MaeII ACGT 3 cut(s) 537, 636, 885
MalI GATC 4 cut(s) 101, 128, 344, 686
MboI GATC 4 cut(s) 99, 126, 342, 684
MboII GAAGA 5 cut(s) 305, 323, 376, 439, 730
MhlI GDGCHC 1 cut(s) 489
MlsI TGGCCA 2 cut(s) 35, 93
MluCI AATT 3 cut(s) 113, 350, 501
MluNI TGGCCA 2 cut(s) 35, 93
MlyI GAGTC 2 cut(s) 320, 794
MmeI TCCRAC 2 cut(s) 461, 706
Mox20I TGGCCA 2 cut(s) 35, 93
MscI TGGCCA 2 cut(s) 35, 93
MseI TTAA 1 cut(s) 609
MslI CAYNNNNRTG 2 cut(s) 68, 224
Msp20I TGGCCA 2 cut(s) 35, 93
MspA1I CMGCKG 1 cut(s) 281
MspI CCGG 4 cut(s) 132, 371, 527, 621
MspR9I CCNGG 1 cut(s) 498
Mva1269I GAATGC 1 cut(s) 703
MvaI CCWGG 1 cut(s) 498
MvnI CGCG 1 cut(s) 281
MwoI GCNNNNNNNGC 2 cut(s) 238, 493
NcoI CCATGG 2 cut(s) 30, 77
NdeII GATC 4 cut(s) 99, 126, 342, 684
NheI GCTAGC 1 cut(s) 82
NlaIII CATG 6 cut(s) 34, 73, 81, 100, 661, 939
NlaIV GGNNCC 5 cut(s) 268, 408, 487, 525, 558
NmeAIII GCCGAG 2 cut(s) 295, 765
OliI CACNNNNGTG 1 cut(s) 224
PcsI WCGNNNNNNNCGW 2 cut(s) 633, 642
PctI GAATGC 1 cut(s) 703
PfeI GAWTC 2 cut(s) 247, 433
PflFI GACNNNGTC 1 cut(s) 299
PkrI GCNGC 1 cut(s) 466
PleI GAGTC 2 cut(s) 320, 793
PpsI GAGTC 2 cut(s) 320, 793
Ppu21I YACGTR 2 cut(s) 538, 886
Psp6I CCWGG 1 cut(s) 496
PspFI CCCAGC 1 cut(s) 689
PspGI CCWGG 1 cut(s) 496
PspN4I GGNNCC 5 cut(s) 268, 408, 487, 525, 558
PspOMI GGGCCC 1 cut(s) 485
PspPI GGNCC 2 cut(s) 485, 486
PsyI GACNNNGTC 1 cut(s) 299
RsaI GTAC 5 cut(s) 8, 408, 525, 884, 905
RsaNI GTAC 5 cut(s) 7, 407, 524, 883, 904
RseI CAYNNNNRTG 2 cut(s) 68, 224
SacII CCGCGG 1 cut(s) 282
SaqAI TTAA 1 cut(s) 609
SatI GCNGC 1 cut(s) 465
Sau3AI GATC 4 cut(s) 99, 126, 342, 684
Sau96I GGNCC 2 cut(s) 485, 486
ScaI AGTACT 1 cut(s) 8
SchI GAGTC 2 cut(s) 320, 794
ScrFI CCNGG 1 cut(s) 498
SduI GDGCHC 1 cut(s) 489
SfaNI GCATC 1 cut(s) 316
Sfr303I CCGCGG 1 cut(s) 282
SgrBI CCGCGG 1 cut(s) 282
SmiMI CAYNNNNRTG 2 cut(s) 68, 224
SmlI CTYRAG 3 cut(s) 311, 356, 580
SmoI CTYRAG 3 cut(s) 311, 356, 580
SnaBI TACGTA 1 cut(s) 538
Sse9I AATT 3 cut(s) 113, 350, 501
SsiI CCGC 8 cut(s) 197, 279, 281, 305, 441, 465, 545, 776
SspMI CTAG 1 cut(s) 83
StyD4I CCNGG 1 cut(s) 496
StyI CCWWGG 3 cut(s) 30, 77, 837
TaaI ACNGT 4 cut(s) 19, 53, 518, 574
TaiI ACGT 3 cut(s) 540, 639, 888
TaqI TCGA 2 cut(s) 111, 387
TaqII GACCGA 1 cut(s) 631
TasI AATT 3 cut(s) 113, 350, 501
TatI WGTACW 1 cut(s) 6
TauI GCSGC 1 cut(s) 467
TfiI GAWTC 2 cut(s) 247, 433
Tru1I TTAA 1 cut(s) 609
Tru9I TTAA 1 cut(s) 609
TscAI CASTG 3 cut(s) 22, 243, 672
TspDTI ATGAA 3 cut(s) 145, 646, 762
TspRI CASTG 3 cut(s) 22, 243, 672
Tth111I GACNNNGTC 1 cut(s) 299
XapI RAATTY 2 cut(s) 113, 501
XspI CTAG 1 cut(s) 83
ZrmI AGTACT 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.