Rroxscaffold_2G00132970

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000339
Physical Location & Seq
Reverse (-)
70059371 .. 70061094
1724 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00132970.1

Sequence Viewer

Length: 1338 bp
ATGAGCTCTGCCTCTGCAACTAAGCCTGAGAAGCTCCACATAGCTTTGTTCCCATGGCTTGCCTTCGGTCACATAATCCCATTTCTTGAGGTAGCCAAGCACATAGCTCGCAGAGGCCACAAGGTTTCCTTCATTTCCACACCTAGAAACATCCAACGACTCCCGAAAATCCCACAAAACCTAGCCCCTCTGATCACTCTAGTCCAAATCCCACTCCCCCGCGTCGAAAACCTCCCTGAAAAAGCAGAGGCCACCACAGACGTCCCACACGACCTTATCCCATACCTCAAAATAGCTCATGATGGACTCGAACAGGGAATCTCTGAATTCCTACAAGCACACGCTCCGGATTGGATTATTCACGACTTTGCCCCTCACTGGTTGCCACCAATAGCTATCAAGCTCGGCATCTCACGAGCCCATTTCAGTGTCTACTATGCATCAGCTCTATGTTTCGGTGGACCAACATCACCAGTTCTAGTGTCCCGCTATGGTCTTAGAACACATCCCAAGCATTTCACTGTCTCTCCCGAATGGATTCCCTTTCCGTCCAAAGTATATTATAGGCCTTTCGAGGCCAAGAGACTGGTGGATGGTATTATGAAACCAAATGCTTCTGGCGTGTCTGATTCGTTTCGTTCGGAATCAACTATCCAAGGTTGTCAAGTCTACTTCATTCGAAGTTGTAGAGAGATCGAGGGTGAGTGGCTCGATTTGCTTGAAGACCTTCACCAAAAACCTGTAGTGCTTCCAACGGGCTTATTGCCACCCTCTATACCAACAAGTGATGAAGACGGAAAAGATAGTAATTGGTCCAAAATTGCAGGTTGGCTGGACAAACAAGAGAAAGGCAAAGTAGTTTATGTTGCATTTGGGAGTGAGCCTAATTTAAGCCAAGAAGAGTTCAATGAGTTGGCTCTTGGATTGGAGCTATGTGGATTGCCTTTTTTTTGGGTGCTCAGGAAACCGAGTCATGGATCCGGGGAAGGTGATTCGGTTAATTTACCATATGGGTTCGAGGACCGGACCAAAGATCGTGGGCTTGTCTGGCCTACATGGGCTCCTCAGCTCAAAATTTTGGCCCACGAGTCCATCGGGGGTTTCTTGACTCATTGCGGTTCGAGTTCCCTCATTGAGTCACTTCAATTCGGGCGTCCTCTAATCATGCTGCCATTTATGTATGATCAAGGGCTAATTGCTAGGTTTTGGGACAAGAAGATCGGGATAGAGGTACCGAGAGACGAAGAGAGTGGACGGTTTACAAGGAACGATTTGGCAAATTCATTGAATTTGGTTGTGGTGGTTGAGGAGGGGGAAGCCATACAGAGATGGAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

445

Amino Acids

49.96

Weight (kDa)

6.25

Isoelectric Point (pI)

49.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 283 - 433 4.3e-13 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000339)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22590
fragaria_vesca FvH4_1g12660 FvH4_1g19380 FvH4_1g19390 FvH4_1g19400 FvH4_1g19402 FvH4_1g19420 FvH4_1g19450 FvH4_1g19460 FvH4_1g19464 FvH4_1g19480
malus_domestica MD01G1041000.v1.1 MD15G1310300.v1.1
prunus_persica Prupe.6G203500_v2.0.a1 Prupe.6G203700_v2.0.a1 Prupe.6G203800_v2.0.a1 Prupe.6G203900_v2.0.a1 Prupe.6G204000_v2.0.a1
pyrus_communis pycom01g06860
rosa_chinensis RchiOBHm_Chr2g0110741 RchiOBHm_Chr2g0110761 RchiOBHm_Chr2g0110781 RchiOBHm_Chr2g0110791 RchiOBHm_Chr2g0110831 RchiOBHm_Chr2g0110841 RchiOBHm_Chr2g0110861 RchiOBHm_Chr2g0110881 RchiOBHm_Chr2g0110901 RchiOBHm_Chr2g0110931 RchiOBHm_Chr2g0111531
rosa_laevigata RLG00000017837 RLG00000017838 RLG00000017839 RLG00000017840 RLG00000017842 RLG00000017843 RLG00000017844 RLG00000017845 RLG00000017846 RLG00000017848 RLG00000017850 RLG00000017854 RLG00000017897
rosa_multiflora Rmu_co8508665.1_g000001 Rmu_sc0003291.1_g000004 Rmu_sc0003291.1_g000015 Rmu_sc0003291.1_g000016 Rmu_sc0003291.1_g000023 Rmu_sc0003291.1_g000029 Rmu_sc0003291.1_g000032 Rmu_sc0003994.1_g000017 Rmu_sc0003994.1_g000019
rosa_roxburghii Rroxscaffold_2G00132240 Rroxscaffold_2G00132800 Rroxscaffold_2G00132810 Rroxscaffold_2G00132830 Rroxscaffold_2G00132850 Rroxscaffold_2G00132900 Rroxscaffold_2G00132930 Rroxscaffold_2G00132940 Rroxscaffold_2G00132950 Rroxscaffold_2G00132970
rosa_rugosa Rorug02G0169400.1 Rorug02G0169500 Rorug02G0169500 Rorug02G0169500 Rorug02G0169600 Rorug02G0169700 Rorug02G0169800 Rorug02G0169900 Rorug02G0170000 Rorug02G0170100 Rorug02G0170200 Rorug02G0174900
rosa_samantha Rh2BG231600 Rh2BG231800 Rh2BG232100 Rh2BG232400 Rh2BG232600 Rh2BG232800 Rh2BG233200 Rh2BG233400 Rh2BG233700 Rh2BG239500 Rh2CG224000 Rh2CG224300 Rh2CG224400 Rh2CG224700 Rh2CG224800 Rh2CG225000 Rh2CG225200 Rh2CG225300 Rh2DG227900 Rh2DG228000 Rh2DG228100 Rh2DG228800 Rh2DG228900 Rh2DG229200 Rh2DG229400 Rh2DG229600 Rh2DG229800 Rh2DG229900 Rh2DG230200
rosa_wichuraiana Rw2G017100 Rw2G017110 Rw2G017130 Rw2G017140 Rw2G017150 Rw2G017170 Rw2G017580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 264
Acc36I ACCTGC 1 cut(s) 815
Acc65I GGTACC 1 cut(s) 1231
AccB1I GGYRCC 1 cut(s) 1231
AccI GTMKAC 2 cut(s) 432, 669
AccII CGCG 1 cut(s) 222
AccIII TCCGGA 1 cut(s) 346
AciI CCGC 3 cut(s) 220, 487, 1116
AclWI GGATC 2 cut(s) 972, 985
AcsI RAATTY 4 cut(s) 326, 1074, 1279, 1288
AcyI GRCGYC 2 cut(s) 261, 1153
AfaI GTAC 1 cut(s) 1233
AfiI CCNNNNNNNGG 2 cut(s) 378, 974
AgsI TTSAA 4 cut(s) 722, 907, 1145, 1288
Alw21I GWGCWC 2 cut(s) 8, 960
Alw26I GTCTC 3 cut(s) 529, 577, 1233
AlwI GGATC 2 cut(s) 972, 985
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 6 cut(s) 115, 249, 566, 576, 1049, 1080
ApeKI GCWGC 1 cut(s) 1168
ApoI RAATTY 4 cut(s) 326, 1074, 1279, 1288
Asp700I GAANNNNTTC 2 cut(s) 537, 726
Asp718I GGTACC 1 cut(s) 1231
AspS9I GGNCC 5 cut(s) 461, 813, 1021, 1026, 1081
AsuC2I CCSGG 1 cut(s) 982
AsuHPI GGTGA 4 cut(s) 462, 713, 722, 1001
AsuII TTCGAA 1 cut(s) 679
AvaII GGWCC 4 cut(s) 461, 813, 1021, 1026
BamHI GGATCC 1 cut(s) 977
BanI GGYRCC 1 cut(s) 1231
BanII GRGCYC 3 cut(s) 8, 421, 1063
BauI CACGAG 2 cut(s) 414, 1085
BbsI GAAGAC 2 cut(s) 729, 798
Bbv12I GWGCWC 2 cut(s) 8, 960
BbvCI CCTCAGC 1 cut(s) 1065
BbvI GCAGC 1 cut(s) 1155
BccI CCATC 4 cut(s) 296, 587, 1100, 1323
BcgI CGANNNNNNTGC 2 cut(s) 89, 123
BclI TGATCA 2 cut(s) 192, 1183
BcnI CCSGG 1 cut(s) 982
BcoDI GTCTC 3 cut(s) 529, 577, 1233
BfaI CTAG 5 cut(s) 144, 182, 200, 479, 1200
BfmI CTRYAG 1 cut(s) 741
BfuAI ACCTGC 1 cut(s) 815
BisI GCNGC 1 cut(s) 1169
BlsI GCNGC 1 cut(s) 1170
Bme1390I CCNGG 1 cut(s) 982
Bme18I GGWCC 4 cut(s) 461, 813, 1021, 1026
BmgT120I GGNCC 5 cut(s) 461, 813, 1021, 1026, 1081
BmiI GGNNCC 3 cut(s) 979, 1062, 1233
BmrFI CCNGG 1 cut(s) 982
BmsI GCATC 2 cut(s) 417, 449
BpiI GAAGAC 2 cut(s) 729, 798
Bpu10I CCTNAGC 2 cut(s) 959, 1065
Bpu14I TTCGAA 1 cut(s) 679
BpuEI CTTGAG 1 cut(s) 107
BpuMI CCSGG 1 cut(s) 982
BsaHI GRCGYC 2 cut(s) 261, 1153
BsaJI CCNNGG 3 cut(s) 53, 655, 981
BsaWI WCCGGW 2 cut(s) 346, 1023
BsaXI ACNNNNNCTCC 4 cut(s) 511, 541, 1045, 1075
Bsc4I CCNNNNNNNGG 2 cut(s) 378, 974
Bse1I ACTGG 3 cut(s) 383, 473, 591
Bse3DI GCAATG 1 cut(s) 1111
BseAI TCCGGA 1 cut(s) 346
BseDI CCNNGG 3 cut(s) 53, 655, 981
BseGI GGATG 3 cut(s) 150, 505, 598
BseLI CCNNNNNNNGG 2 cut(s) 378, 974
BseMI GCAATG 1 cut(s) 1111
BseMII CTCAG 3 cut(s) 18, 973, 1079
BseNI ACTGG 3 cut(s) 383, 473, 591
BseRI GAGGAG 2 cut(s) 1053, 1322
BseXI GCAGC 1 cut(s) 1155
Bsh1236I CGCG 1 cut(s) 222
BshFI GGCC 6 cut(s) 117, 251, 568, 578, 1051, 1082
BshNI GGYRCC 1 cut(s) 1231
BsiHKAI GWGCWC 2 cut(s) 8, 960
BsiSI CCGG 3 cut(s) 347, 981, 1024
BslFI GGGAC 3 cut(s) 248, 469, 1223
BslI CCNNNNNNNGG 2 cut(s) 378, 974
BsmAI GTCTC 3 cut(s) 529, 577, 1233
BsmBI CGTCTC 1 cut(s) 1233
BsmFI GGGAC 3 cut(s) 248, 469, 1223
BsnI GGCC 6 cut(s) 117, 251, 568, 578, 1051, 1082
Bsp119I TTCGAA 1 cut(s) 679
Bsp1286I GDGCHC 4 cut(s) 8, 421, 960, 1063
Bsp13I TCCGGA 1 cut(s) 346
Bsp143I GATC 6 cut(s) 192, 693, 977, 1033, 1183, 1218
Bsp19I CCATGG 1 cut(s) 53
BspACI CCGC 3 cut(s) 220, 487, 1116
BspANI GGCC 6 cut(s) 117, 251, 568, 578, 1051, 1082
BspCNI CTCAG 3 cut(s) 19, 972, 1078
BspEI TCCGGA 1 cut(s) 346
BspFNI CGCG 1 cut(s) 222
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 3 cut(s) 979, 1062, 1233
BspMI ACCTGC 1 cut(s) 815
BspPI GGATC 2 cut(s) 972, 985
BspT104I TTCGAA 1 cut(s) 679
BspT107I GGYRCC 1 cut(s) 1231
BsrDI GCAATG 1 cut(s) 1111
BsrI ACTGG 3 cut(s) 383, 473, 591
BssECI CCNNGG 3 cut(s) 53, 655, 981
BssMI GATC 6 cut(s) 192, 693, 977, 1033, 1183, 1218
BssNI GRCGYC 2 cut(s) 261, 1153
BssSI CACGAG 2 cut(s) 414, 1085
BssT1I CCWWGG 2 cut(s) 53, 655
Bst2BI CACGAG 2 cut(s) 414, 1085
Bst4CI ACNGT 2 cut(s) 523, 1257
Bst6I CTCTTC 2 cut(s) 894, 1239
BstACI GRCGYC 2 cut(s) 261, 1153
BstBI TTCGAA 1 cut(s) 679
BstC8I GCNNGC 2 cut(s) 60, 109
BstDEI CTNAG 5 cut(s) 21, 27, 497, 959, 1065
BstDSI CCRYGG 1 cut(s) 53
BstF5I GGATG 3 cut(s) 150, 505, 598
BstFNI CGCG 1 cut(s) 222
BstKTI GATC 6 cut(s) 195, 696, 980, 1036, 1186, 1221
BstMAI GTCTC 3 cut(s) 529, 577, 1233
BstMBI GATC 6 cut(s) 192, 693, 977, 1033, 1183, 1218
BstMWI GCNNNNNNNGC 3 cut(s) 31, 715, 1048
BstSCI CCNGG 1 cut(s) 980
BstSFI CTRYAG 1 cut(s) 741
BstUI CGCG 1 cut(s) 222
BstV1I GCAGC 1 cut(s) 1155
BstV2I GAAGAC 2 cut(s) 729, 798
BstX2I RGATCY 1 cut(s) 977
BstXI CCANNNNNNTGG 1 cut(s) 586
BstYI RGATCY 1 cut(s) 977
BsuRI GGCC 6 cut(s) 117, 251, 568, 578, 1051, 1082
BtgI CCRYGG 1 cut(s) 53
BtsCI GGATG 3 cut(s) 150, 505, 598
BtsIMutI CAGTG 3 cut(s) 376, 433, 519
BveI ACCTGC 1 cut(s) 815
Cac8I GCNNGC 2 cut(s) 60, 109
CciI TCATGA 1 cut(s) 298
Cfr13I GGNCC 5 cut(s) 461, 813, 1021, 1026, 1081
CseI GACGC 2 cut(s) 211, 1142
Csp6I GTAC 1 cut(s) 1232
CspCI CAANNNNNGTGG 2 cut(s) 1018, 1053
CviAII CATG 5 cut(s) 54, 299, 974, 1056, 1165
CviQI GTAC 1 cut(s) 1232
DdeI CTNAG 5 cut(s) 21, 27, 497, 959, 1065
DpnI GATC 6 cut(s) 194, 695, 979, 1035, 1185, 1220
DpnII GATC 6 cut(s) 192, 693, 977, 1033, 1183, 1218
Eam1104I CTCTTC 2 cut(s) 894, 1239
EarI CTCTTC 2 cut(s) 894, 1239
Ecl136II GAGCTC 1 cut(s) 6
Eco130I CCWWGG 2 cut(s) 53, 655
Eco147I AGGCCT 1 cut(s) 568
Eco24I GRGCYC 3 cut(s) 8, 421, 1063
Eco47I GGWCC 4 cut(s) 461, 813, 1021, 1026
Eco53kI GAGCTC 1 cut(s) 6
EcoICRI GAGCTC 1 cut(s) 6
EcoRI GAATTC 1 cut(s) 326
EcoT14I CCWWGG 2 cut(s) 53, 655
EcoT22I ATGCAT 1 cut(s) 442
EcoT38I GRGCYC 3 cut(s) 8, 421, 1063
ErhI CCWWGG 2 cut(s) 53, 655
Esp3I CGTCTC 1 cut(s) 1233
FaeI CATG 5 cut(s) 57, 302, 977, 1059, 1168
FalI AAGNNNNNCTT 2 cut(s) 113, 145
FaqI GGGAC 3 cut(s) 248, 469, 1223
FatI CATG 5 cut(s) 53, 298, 973, 1055, 1164
FauI CCCGC 2 cut(s) 227, 494
FauNDI CATATG 1 cut(s) 1009
FbaI TGATCA 2 cut(s) 192, 1183
FblI GTMKAC 2 cut(s) 432, 669
Fnu4HI GCNGC 1 cut(s) 1169
FokI GGATG 3 cut(s) 137, 492, 605
FriOI GRGCYC 3 cut(s) 8, 421, 1063
Fsp4HI GCNGC 1 cut(s) 1169
FspBI CTAG 5 cut(s) 144, 182, 200, 479, 1200
GluI GCNGC 1 cut(s) 1169
HaeIII GGCC 6 cut(s) 117, 251, 568, 578, 1051, 1082
HapII CCGG 3 cut(s) 347, 981, 1024
HgaI GACGC 2 cut(s) 211, 1142
Hin1I GRCGYC 2 cut(s) 261, 1153
Hin1II CATG 5 cut(s) 57, 302, 977, 1059, 1168
HpaII CCGG 3 cut(s) 347, 981, 1024
HphI GGTGA 4 cut(s) 462, 713, 722, 1001
Hpy166II GTNNAC 5 cut(s) 433, 461, 670, 1253, 1260
Hpy188I TCNGA 4 cut(s) 192, 325, 628, 643
Hpy8I GTNNAC 5 cut(s) 433, 461, 670, 1253, 1260
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 4 cut(s) 73, 139, 737, 980
HpyCH4III ACNGT 2 cut(s) 523, 1257
HpyCH4IV ACGT 1 cut(s) 261
HpyCH4V TGCA 4 cut(s) 17, 440, 824, 869
HpyF10VI GCNNNNNNNGC 3 cut(s) 31, 715, 1048
HpyF3I CTNAG 5 cut(s) 21, 27, 497, 959, 1065
HpySE526I ACGT 1 cut(s) 261
Hsp92I GRCGYC 2 cut(s) 261, 1153
Hsp92II CATG 5 cut(s) 57, 302, 977, 1059, 1168
Kpn2I TCCGGA 1 cut(s) 346
KpnI GGTACC 1 cut(s) 1235
Ksp22I TGATCA 2 cut(s) 192, 1183
Kzo9I GATC 6 cut(s) 192, 693, 977, 1033, 1183, 1218
LmnI GCTCC 5 cut(s) 39, 349, 928, 1066, 1332
Lsp1109I GCAGC 1 cut(s) 1155
LweI GCATC 2 cut(s) 417, 449
MaeI CTAG 5 cut(s) 144, 182, 200, 479, 1200
MaeII ACGT 1 cut(s) 261
MaeIII GTNAC 2 cut(s) 68, 1137
MalI GATC 6 cut(s) 194, 695, 979, 1035, 1185, 1220
MboI GATC 6 cut(s) 192, 693, 977, 1033, 1183, 1218
MboII GAAGA 5 cut(s) 734, 803, 911, 1228, 1256
MflI RGATCY 1 cut(s) 977
MhlI GDGCHC 4 cut(s) 8, 421, 960, 1063
MlyI GAGTC 6 cut(s) 153, 300, 979, 1097, 1102, 1145
MmeI TCCRAC 2 cut(s) 178, 776
Mph1103I ATGCAT 1 cut(s) 442
MroI TCCGGA 1 cut(s) 346
MroXI GAANNNNTTC 2 cut(s) 537, 726
MseI TTAA 2 cut(s) 890, 999
MslI CAYNNNNRTG 1 cut(s) 426
MspI CCGG 3 cut(s) 347, 981, 1024
MspR9I CCNGG 1 cut(s) 982
MvnI CGCG 1 cut(s) 222
MwoI GCNNNNNNNGC 3 cut(s) 31, 715, 1048
NciI CCSGG 1 cut(s) 982
NcoI CCATGG 1 cut(s) 53
NdeI CATATG 1 cut(s) 1009
NdeII GATC 6 cut(s) 192, 693, 977, 1033, 1183, 1218
NlaIII CATG 5 cut(s) 57, 302, 977, 1059, 1168
NlaIV GGNNCC 3 cut(s) 979, 1062, 1233
NmeAIII GCCGAG 1 cut(s) 384
NmuCI GTSAC 2 cut(s) 68, 1137
NsiI ATGCAT 1 cut(s) 442
NspV TTCGAA 1 cut(s) 679
PagI TCATGA 1 cut(s) 298
PceI AGGCCT 1 cut(s) 568
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PdmI GAANNNNTTC 2 cut(s) 537, 726
PfeI GAWTC 5 cut(s) 318, 538, 629, 644, 992
PkrI GCNGC 1 cut(s) 1170
PleI GAGTC 6 cut(s) 153, 300, 978, 1096, 1102, 1144
PpsI GAGTC 6 cut(s) 153, 300, 978, 1096, 1102, 1144
Psp124BI GAGCTC 1 cut(s) 8
PspN4I GGNNCC 3 cut(s) 979, 1062, 1233
PspPI GGNCC 5 cut(s) 461, 813, 1021, 1026, 1081
PsuI RGATCY 1 cut(s) 977
RsaI GTAC 1 cut(s) 1233
RsaNI GTAC 1 cut(s) 1232
RseI CAYNNNNRTG 1 cut(s) 426
SacI GAGCTC 1 cut(s) 8
SaqAI TTAA 2 cut(s) 890, 999
SatI GCNGC 1 cut(s) 1169
Sau3AI GATC 6 cut(s) 192, 693, 977, 1033, 1183, 1218
Sau96I GGNCC 5 cut(s) 461, 813, 1021, 1026, 1081
SchI GAGTC 6 cut(s) 153, 300, 979, 1097, 1102, 1145
ScrFI CCNGG 1 cut(s) 982
SduI GDGCHC 4 cut(s) 8, 421, 960, 1063
SfaNI GCATC 2 cut(s) 417, 449
SfcI CTRYAG 1 cut(s) 741
SfuI TTCGAA 1 cut(s) 679
SinI GGWCC 4 cut(s) 461, 813, 1021, 1026
SmiMI CAYNNNNRTG 1 cut(s) 426
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
SseBI AGGCCT 1 cut(s) 568
SsiI CCGC 3 cut(s) 220, 487, 1116
SspMI CTAG 5 cut(s) 144, 182, 200, 479, 1200
SstI GAGCTC 1 cut(s) 8
StuI AGGCCT 1 cut(s) 568
StyD4I CCNGG 1 cut(s) 980
StyI CCWWGG 2 cut(s) 53, 655
TaaI ACNGT 2 cut(s) 523, 1257
TaiI ACGT 1 cut(s) 264
TaqI TCGA 8 cut(s) 225, 309, 573, 679, 696, 711, 1017, 1121
TaqII GACCGA 1 cut(s) 56
TfiI GAWTC 5 cut(s) 318, 538, 629, 644, 992
Tru1I TTAA 2 cut(s) 890, 999
Tru9I TTAA 2 cut(s) 890, 999
TscAI CASTG 3 cut(s) 383, 433, 526
TseFI GTSAC 2 cut(s) 68, 1137
TseI GCWGC 1 cut(s) 1168
Tsp45I GTSAC 2 cut(s) 68, 1137
TspDTI ATGAA 5 cut(s) 121, 617, 664, 804, 1272
TspGWI ACGGA 2 cut(s) 537, 810
TspRI CASTG 3 cut(s) 383, 433, 526
VpaK11BI GGWCC 4 cut(s) 461, 813, 1021, 1026
XapI RAATTY 4 cut(s) 326, 1074, 1279, 1288
XcmI CCANNNNNNNNNTGG 1 cut(s) 586
XmiI GTMKAC 2 cut(s) 432, 669
XmnI GAANNNNTTC 2 cut(s) 537, 726
XspI CTAG 5 cut(s) 144, 182, 200, 479, 1200
ZraI GACGTC 1 cut(s) 262
Zsp2I ATGCAT 1 cut(s) 442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.