Prupe.6G204000_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000339
Physical Location & Seq
Reverse (-)
21169413 .. 21172230
2818 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G204000.1

Sequence Viewer

Length: 996 bp
ATGAGCTCCACAACTGAGCCTAAGAAGCTTCACATAGCCTTGTTTCCATGGCTGGCCTTTGGTCACATAATTCCATTTTTTGAGGTTGCCAAGCACGTGGCTCGAAGAGGTCACAAAGTTTCCTTCATATCCACCCCACGAAACATCCAACGCCTCCCCAAAATCCCTCAACACTTAACCTCTTTGATCAATTTAGTGCAGATCCAGCTGCCACGTGTCAAAAATTTGCCGGAGAATGCAGAGGCCACTATGGGCGTGCCATACCACATAATCCCATACCTCAAAATGGCTCATGATGAACTCGAACAATGTATTTCCAATTTCCTACAAACTCACAAGCCGAATTGGATTATTCACGACTTTGCCCCTTACTGGTTACCACCTATAGCTTCTAGCCTAGGCATTTCACGAGCACATTTCAGTGTTTTCAACGGGTCCTCCCTATGTTTCTATGGACCACAGGGACTAGATTGCTATGGTGTTAGAACACTACCAGAGCAATTTACTGTCCCTGTTGAATGGATTCCTTTTCCTTCAAATATGGTTTTAAAGTCTTTTGAGGCCAAGAACCTGTTTGACAGTATGAAACAAAACGCTTCCAGCGTTTCGGATTGGTTTCGCGTGAAGTCAACAGTCCAAGGTTGCCAAGTCTATTTTATTCGAAGTTGTAGAGAGACTGAGGGGGAGTGGCTCGATTTGCTACAAGAGCTTCAACAAAAACCAGTGGTTCCAACAGGCTTAATGCCACCTGTTGTGCAAGCTAGAGAAGACAAAGAAGATTGGTCTACAATTGCTCAGTGGCTGGACAAAAAGAAGAAAGCGACAGTGGTGTACATTGCCCTTGGAAGTGAGCTTAATCTCAGCCAACAAGACTTCACAGAGTTGGCTCTTGGGTTAGAGCTATCTGGGTTGCCATTTTTTTGGGCCCTGAGAAAACCTAGTTGGTCAGGAAACGGTGGCTCAGGGAAGCTACCAGATGGGTTCAAGGATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

332

Amino Acids

37.55

Weight (kDa)

8.5

Isoelectric Point (pI)

48.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000339)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22590
fragaria_vesca FvH4_1g12660 FvH4_1g19380 FvH4_1g19390 FvH4_1g19400 FvH4_1g19402 FvH4_1g19420 FvH4_1g19450 FvH4_1g19460 FvH4_1g19464 FvH4_1g19480
malus_domestica MD01G1041000.v1.1 MD15G1310300.v1.1
prunus_persica Prupe.6G203500_v2.0.a1 Prupe.6G203700_v2.0.a1 Prupe.6G203800_v2.0.a1 Prupe.6G203900_v2.0.a1 Prupe.6G204000_v2.0.a1
pyrus_communis pycom01g06860
rosa_chinensis RchiOBHm_Chr2g0110741 RchiOBHm_Chr2g0110761 RchiOBHm_Chr2g0110781 RchiOBHm_Chr2g0110791 RchiOBHm_Chr2g0110831 RchiOBHm_Chr2g0110841 RchiOBHm_Chr2g0110861 RchiOBHm_Chr2g0110881 RchiOBHm_Chr2g0110901 RchiOBHm_Chr2g0110931 RchiOBHm_Chr2g0111531
rosa_laevigata RLG00000017837 RLG00000017838 RLG00000017839 RLG00000017840 RLG00000017842 RLG00000017843 RLG00000017844 RLG00000017845 RLG00000017846 RLG00000017848 RLG00000017850 RLG00000017854 RLG00000017897
rosa_multiflora Rmu_co8508665.1_g000001 Rmu_sc0003291.1_g000004 Rmu_sc0003291.1_g000015 Rmu_sc0003291.1_g000016 Rmu_sc0003291.1_g000023 Rmu_sc0003291.1_g000029 Rmu_sc0003291.1_g000032 Rmu_sc0003994.1_g000017 Rmu_sc0003994.1_g000019
rosa_roxburghii Rroxscaffold_2G00132240 Rroxscaffold_2G00132800 Rroxscaffold_2G00132810 Rroxscaffold_2G00132830 Rroxscaffold_2G00132850 Rroxscaffold_2G00132900 Rroxscaffold_2G00132930 Rroxscaffold_2G00132940 Rroxscaffold_2G00132950 Rroxscaffold_2G00132970
rosa_rugosa Rorug02G0169400.1 Rorug02G0169500 Rorug02G0169500 Rorug02G0169500 Rorug02G0169600 Rorug02G0169700 Rorug02G0169800 Rorug02G0169900 Rorug02G0170000 Rorug02G0170100 Rorug02G0170200 Rorug02G0174900
rosa_samantha Rh2BG231600 Rh2BG231800 Rh2BG232100 Rh2BG232400 Rh2BG232600 Rh2BG232800 Rh2BG233200 Rh2BG233400 Rh2BG233700 Rh2BG239500 Rh2CG224000 Rh2CG224300 Rh2CG224400 Rh2CG224700 Rh2CG224800 Rh2CG225000 Rh2CG225200 Rh2CG225300 Rh2DG227900 Rh2DG228000 Rh2DG228100 Rh2DG228800 Rh2DG228900 Rh2DG229200 Rh2DG229400 Rh2DG229600 Rh2DG229800 Rh2DG229900 Rh2DG230200
rosa_wichuraiana Rw2G017100 Rw2G017110 Rw2G017130 Rw2G017140 Rw2G017150 Rw2G017170 Rw2G017580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 785
AccII CGCG 1 cut(s) 621
AclWI GGATC 1 cut(s) 196
AcsI RAATTY 1 cut(s) 223
AcvI CACGTG 2 cut(s) 97, 215
AfaI GTAC 1 cut(s) 833
AfiI CCNNNNNNNGG 2 cut(s) 286, 372
AflIII ACRYGT 1 cut(s) 214
AgsI TTSAA 5 cut(s) 430, 518, 537, 713, 985
AjuI GAANNNNNNNTTGG 2 cut(s) 925, 957
AluBI AGCT 9 cut(s) 6, 28, 208, 389, 709, 761, 853, 901, 970
AluI AGCT 9 cut(s) 6, 28, 208, 389, 709, 761, 853, 901, 970
Alw21I GWGCWC 2 cut(s) 8, 415
Alw26I GTCTC 1 cut(s) 668
AlwI GGATC 1 cut(s) 196
AlwNI CAGNNNCTG 1 cut(s) 802
AoxI GGCC 4 cut(s) 54, 243, 561, 924
ApaI GGGCCC 1 cut(s) 928
ApeKI GCWGC 1 cut(s) 208
ApoI RAATTY 1 cut(s) 223
Asp700I GAANNNNTTC 1 cut(s) 522
AspA2I CCTAGG 1 cut(s) 397
AspS9I GGNCC 4 cut(s) 435, 455, 924, 925
AsuII TTCGAA 1 cut(s) 661
AvaII GGWCC 2 cut(s) 435, 455
AvrII CCTAGG 1 cut(s) 397
BaeGI GKGCMC 1 cut(s) 928
BanII GRGCYC 2 cut(s) 8, 928
BauI CACGAG 1 cut(s) 408
BbrPI CACGTG 2 cut(s) 97, 215
BbsI GAAGAC 1 cut(s) 774
Bbv12I GWGCWC 2 cut(s) 8, 415
BbvI GCAGC 1 cut(s) 195
BccI CCATC 1 cut(s) 971
BcgI CGANNNNNNTGC 2 cut(s) 83, 117
BclI TGATCA 1 cut(s) 186
BcoDI GTCTC 1 cut(s) 668
BfaI CTAG 5 cut(s) 393, 398, 467, 762, 939
BfmI CTRYAG 1 cut(s) 384
BisI GCNGC 1 cut(s) 209
BlnI CCTAGG 1 cut(s) 397
BlsI GCNGC 1 cut(s) 210
Bme18I GGWCC 2 cut(s) 435, 455
BmgT120I GGNCC 4 cut(s) 435, 455, 924, 925
BmiI GGNNCC 3 cut(s) 436, 729, 926
BpiI GAAGAC 1 cut(s) 774
Bpu10I CCTNAGC 1 cut(s) 961
Bpu14I TTCGAA 1 cut(s) 661
BsaAI YACGTR 2 cut(s) 97, 215
BsaJI CCNNGG 4 cut(s) 47, 397, 637, 841
BsaXI ACNNNNNCTCC 2 cut(s) 422, 452
Bsc4I CCNNNNNNNGG 2 cut(s) 286, 372
Bse1I ACTGG 2 cut(s) 377, 722
Bse3DI GCAATG 1 cut(s) 834
BseDI CCNNGG 4 cut(s) 47, 397, 637, 841
BseGI GGATG 1 cut(s) 144
BseLI CCNNNNNNNGG 2 cut(s) 286, 372
BseMI GCAATG 1 cut(s) 834
BseMII CTCAG 6 cut(s) 6, 669, 809, 874, 920, 975
BseNI ACTGG 2 cut(s) 377, 722
BseSI GKGCMC 1 cut(s) 928
BseXI GCAGC 1 cut(s) 195
BsgI GTGCAG 1 cut(s) 218
Bsh1236I CGCG 1 cut(s) 621
BshFI GGCC 4 cut(s) 56, 245, 563, 926
BsiHKAI GWGCWC 2 cut(s) 8, 415
BsiSI CCGG 1 cut(s) 230
BslFI GGGAC 2 cut(s) 477, 494
BslI CCNNNNNNNGG 2 cut(s) 286, 372
BsmAI GTCTC 1 cut(s) 668
BsmFI GGGAC 2 cut(s) 477, 494
BsmI GAATGC 1 cut(s) 241
BsnI GGCC 4 cut(s) 56, 245, 563, 926
Bsp119I TTCGAA 1 cut(s) 661
Bsp120I GGGCCC 1 cut(s) 924
Bsp1286I GDGCHC 3 cut(s) 8, 415, 928
Bsp1407I TGTACA 1 cut(s) 831
Bsp143I GATC 3 cut(s) 186, 201, 988
Bsp19I CCATGG 1 cut(s) 47
BspANI GGCC 4 cut(s) 56, 245, 563, 926
BspCNI CTCAG 6 cut(s) 7, 670, 808, 873, 921, 974
BspFNI CGCG 1 cut(s) 621
BspHI TCATGA 1 cut(s) 292
BspLI GGNNCC 3 cut(s) 436, 729, 926
BspPI GGATC 1 cut(s) 196
BspT104I TTCGAA 1 cut(s) 661
BsrDI GCAATG 1 cut(s) 834
BsrGI TGTACA 1 cut(s) 831
BsrI ACTGG 2 cut(s) 377, 722
BssECI CCNNGG 4 cut(s) 47, 397, 637, 841
BssMI GATC 3 cut(s) 186, 201, 988
BssSI CACGAG 1 cut(s) 408
BssT1I CCWWGG 4 cut(s) 47, 397, 637, 841
Bst2BI CACGAG 1 cut(s) 408
Bst4CI ACNGT 5 cut(s) 508, 581, 634, 826, 956
Bst6I CTCTTC 1 cut(s) 100
BstAUI TGTACA 1 cut(s) 831
BstBAI YACGTR 2 cut(s) 97, 215
BstBI TTCGAA 1 cut(s) 661
BstC8I GCNNGC 3 cut(s) 54, 257, 759
BstDEI CTNAG 7 cut(s) 15, 21, 678, 795, 860, 929, 961
BstDSI CCRYGG 1 cut(s) 47
BstEII GGTNACC 1 cut(s) 375
BstF5I GGATG 1 cut(s) 144
BstFNI CGCG 1 cut(s) 621
BstKTI GATC 3 cut(s) 189, 204, 991
BstMAI GTCTC 1 cut(s) 668
BstMBI GATC 3 cut(s) 186, 201, 988
BstMWI GCNNNNNNNGC 4 cut(s) 25, 205, 697, 706
BstPI GGTNACC 1 cut(s) 375
BstSFI CTRYAG 1 cut(s) 384
BstSLI GKGCMC 1 cut(s) 928
BstUI CGCG 1 cut(s) 621
BstV1I GCAGC 1 cut(s) 195
BstV2I GAAGAC 1 cut(s) 774
BstX2I RGATCY 2 cut(s) 201, 988
BstXI CCANNNNNNTGG 2 cut(s) 97, 921
BstYI RGATCY 2 cut(s) 201, 988
BsuRI GGCC 4 cut(s) 56, 245, 563, 926
BtgI CCRYGG 1 cut(s) 47
BtsCI GGATG 1 cut(s) 144
BtsIMutI CAGTG 4 cut(s) 427, 729, 803, 831
Cac8I GCNNGC 3 cut(s) 54, 257, 759
CaiI CAGNNNCTG 1 cut(s) 802
CciI TCATGA 1 cut(s) 292
Cfr13I GGNCC 4 cut(s) 435, 455, 924, 925
Csp6I GTAC 1 cut(s) 832
CviAII CATG 2 cut(s) 48, 293
CviQI GTAC 1 cut(s) 832
DdeI CTNAG 7 cut(s) 15, 21, 678, 795, 860, 929, 961
DpnI GATC 3 cut(s) 188, 203, 990
DpnII GATC 3 cut(s) 186, 201, 988
DraI TTTAAA 1 cut(s) 549
Eam1104I CTCTTC 1 cut(s) 100
EarI CTCTTC 1 cut(s) 100
Ecl136II GAGCTC 1 cut(s) 6
Eco130I CCWWGG 4 cut(s) 47, 397, 637, 841
Eco24I GRGCYC 2 cut(s) 8, 928
Eco47I GGWCC 2 cut(s) 435, 455
Eco53kI GAGCTC 1 cut(s) 6
Eco72I CACGTG 2 cut(s) 97, 215
Eco91I GGTNACC 1 cut(s) 375
EcoICRI GAGCTC 1 cut(s) 6
EcoO109I RGGNCCY 2 cut(s) 435, 925
EcoO65I GGTNACC 1 cut(s) 375
EcoT14I CCWWGG 4 cut(s) 47, 397, 637, 841
EcoT38I GRGCYC 2 cut(s) 8, 928
ErhI CCWWGG 4 cut(s) 47, 397, 637, 841
FaeI CATG 2 cut(s) 51, 296
FaqI GGGAC 2 cut(s) 477, 494
FatI CATG 2 cut(s) 47, 292
FbaI TGATCA 1 cut(s) 186
FblI GTMKAC 1 cut(s) 785
Fnu4HI GCNGC 1 cut(s) 209
FokI GGATG 1 cut(s) 131
FriOI GRGCYC 2 cut(s) 8, 928
Fsp4HI GCNGC 1 cut(s) 209
FspBI CTAG 5 cut(s) 393, 398, 467, 762, 939
GluI GCNGC 1 cut(s) 209
HaeIII GGCC 4 cut(s) 56, 245, 563, 926
HapII CCGG 1 cut(s) 230
Hin1II CATG 2 cut(s) 51, 296
HincII GTYRAC 1 cut(s) 630
HindII GTYRAC 1 cut(s) 630
HindIII AAGCTT 1 cut(s) 26
HinfI GANTC 1 cut(s) 523
HpaII CCGG 1 cut(s) 230
Hpy166II GTNNAC 3 cut(s) 630, 786, 832
Hpy188I TCNGA 1 cut(s) 610
Hpy188III TCNNGA 4 cut(s) 293, 356, 408, 948
Hpy8I GTNNAC 3 cut(s) 630, 786, 832
HpyAV CCTTC 2 cut(s) 133, 543
HpyCH4III ACNGT 5 cut(s) 508, 581, 634, 826, 956
HpyCH4IV ACGT 2 cut(s) 96, 214
HpyCH4V TGCA 3 cut(s) 199, 239, 757
HpyF10VI GCNNNNNNNGC 4 cut(s) 25, 205, 697, 706
HpyF3I CTNAG 7 cut(s) 15, 21, 678, 795, 860, 929, 961
HpySE526I ACGT 2 cut(s) 96, 214
Hsp92II CATG 2 cut(s) 51, 296
Ksp22I TGATCA 1 cut(s) 186
Kzo9I GATC 3 cut(s) 186, 201, 988
LmnI GCTCC 1 cut(s) 11
Lsp1109I GCAGC 1 cut(s) 195
MaeI CTAG 5 cut(s) 393, 398, 467, 762, 939
MaeII ACGT 2 cut(s) 96, 214
MaeIII GTNAC 3 cut(s) 62, 110, 375
MalI GATC 3 cut(s) 188, 203, 990
MboI GATC 3 cut(s) 186, 201, 988
MboII GAAGA 4 cut(s) 117, 779, 788, 826
MfeI CAATTG 1 cut(s) 789
MflI RGATCY 2 cut(s) 201, 988
MhlI GDGCHC 3 cut(s) 8, 415, 928
MluCI AATT 7 cut(s) 69, 190, 223, 319, 343, 500, 789
MmeI TCCRAC 2 cut(s) 172, 755
MroXI GAANNNNTTC 1 cut(s) 522
MseI TTAA 4 cut(s) 176, 548, 740, 855
MslI CAYNNNNRTG 1 cut(s) 420
MspA1I CMGCKG 1 cut(s) 208
MspI CCGG 1 cut(s) 230
MunI CAATTG 1 cut(s) 789
Mva1269I GAATGC 1 cut(s) 241
MvnI CGCG 1 cut(s) 621
MwoI GCNNNNNNNGC 4 cut(s) 25, 205, 697, 706
NcoI CCATGG 1 cut(s) 47
NdeII GATC 3 cut(s) 186, 201, 988
NlaIII CATG 2 cut(s) 51, 296
NlaIV GGNNCC 3 cut(s) 436, 729, 926
NmuCI GTSAC 2 cut(s) 62, 110
NspV TTCGAA 1 cut(s) 661
PagI TCATGA 1 cut(s) 292
PcsI WCGNNNNNNNCGW 1 cut(s) 600
PctI GAATGC 1 cut(s) 241
PdmI GAANNNNTTC 1 cut(s) 522
PfeI GAWTC 1 cut(s) 523
PkrI GCNGC 1 cut(s) 210
PmaCI CACGTG 2 cut(s) 97, 215
PmlI CACGTG 2 cut(s) 97, 215
Ppu21I YACGTR 2 cut(s) 97, 215
PpuMI RGGWCCY 1 cut(s) 435
Psp124BI GAGCTC 1 cut(s) 8
Psp5II RGGWCCY 1 cut(s) 435
PspCI CACGTG 2 cut(s) 97, 215
PspEI GGTNACC 1 cut(s) 375
PspN4I GGNNCC 3 cut(s) 436, 729, 926
PspOMI GGGCCC 1 cut(s) 924
PspPI GGNCC 4 cut(s) 435, 455, 924, 925
PspPPI RGGWCCY 1 cut(s) 435
PstNI CAGNNNCTG 1 cut(s) 802
PsuI RGATCY 2 cut(s) 201, 988
PvuII CAGCTG 1 cut(s) 208
RsaI GTAC 1 cut(s) 833
RsaNI GTAC 1 cut(s) 832
RseI CAYNNNNRTG 1 cut(s) 420
SacI GAGCTC 1 cut(s) 8
SaqAI TTAA 4 cut(s) 176, 548, 740, 855
SatI GCNGC 1 cut(s) 209
Sau3AI GATC 3 cut(s) 186, 201, 988
Sau96I GGNCC 4 cut(s) 435, 455, 924, 925
SduI GDGCHC 3 cut(s) 8, 415, 928
SfcI CTRYAG 1 cut(s) 384
SfuI TTCGAA 1 cut(s) 661
SinI GGWCC 2 cut(s) 435, 455
SmiMI CAYNNNNRTG 1 cut(s) 420
Sse9I AATT 7 cut(s) 69, 190, 223, 319, 343, 500, 789
SspMI CTAG 5 cut(s) 393, 398, 467, 762, 939
SstI GAGCTC 1 cut(s) 8
StyI CCWWGG 4 cut(s) 47, 397, 637, 841
TaaI ACNGT 5 cut(s) 508, 581, 634, 826, 956
TaiI ACGT 2 cut(s) 99, 217
TaqI TCGA 4 cut(s) 103, 303, 661, 693
TasI AATT 7 cut(s) 69, 190, 223, 319, 343, 500, 789
TatI WGTACW 1 cut(s) 831
TfiI GAWTC 1 cut(s) 523
Tru1I TTAA 4 cut(s) 176, 548, 740, 855
Tru9I TTAA 4 cut(s) 176, 548, 740, 855
TscAI CASTG 4 cut(s) 427, 729, 803, 831
TseFI GTSAC 2 cut(s) 62, 110
TseI GCWGC 1 cut(s) 208
Tsp45I GTSAC 2 cut(s) 62, 110
TspDTI ATGAA 3 cut(s) 115, 312, 599
TspRI CASTG 4 cut(s) 427, 729, 803, 831
VpaK11BI GGWCC 2 cut(s) 435, 455
XapI RAATTY 1 cut(s) 223
XmaJI CCTAGG 1 cut(s) 397
XmiI GTMKAC 1 cut(s) 785
XmnI GAANNNNTTC 1 cut(s) 522
XspI CTAG 5 cut(s) 393, 398, 467, 762, 939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.