Rmu_sc0003291.1_g000032

UDP-glycosyltransferase 91A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003291.1
OG0000339
Physical Location & Seq
Reverse (-)
150272 .. 151234
963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003291.1_g000032.1.cds

Sequence Viewer

Length: 963 bp
ctggctgcctgcgtcgttttcttagggcccacctcgtcggcagtaccttgtgacgatcgcaagttaccggatgattacactgtctctcccaaatgggtcccttttccagccaccgtggcgtttaggctattcgaggtgcttcggctctataaaagaataaccggagacgaagccaacgtttcggacatttatcggttcatggagacggcgcgaggctgtgacgtcattgctgtgaggagctgtgctgagttcgagccggaatggttgaaccttctaggagttgtacatggaaaaccggtcgtacctgttggtctactttcgactacggctaacgacgaggagaatgatacgtggtggtcaataaaggactggttagaccggcagagcaaaaacagggtggtgtatgttgcattcggaacggaagcgatgccgagtcaagaggaagtgacggaaatagccctaggtttggagaagtccggtttgcccttcttttgggtgctgagaaccaaacatggcgaggatgcggtaaagttgccggagggttttgaggagagaaatgaagggcggggagtggtatgcaggagttgggtcccacagctgaagatactggcgcacgactcgttcggtgtgtttctgagtcactcgggttggagttcggtggtggaggcattaacatttggaagaccgctggtgttgttgcctatgtcgaatgaccaaggactgaatgcgaggtattttggggagaagaaggtcgggtatgagttgccgagggacgagcaagacggattgtttactagtgaggcggtggcggagtcgctgaggatggtgatagagaaggaagagggtaaggtttatagggagaaggccaaggagttgaaggcgttgtttggagacaggaagaggcaaaatatgtacgtggacaagtttttggagtacctcacaactcacaaaggatgtcgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

320

Amino Acids

36.24

Weight (kDa)

5.48

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000339)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22590
fragaria_vesca FvH4_1g12660 FvH4_1g19380 FvH4_1g19390 FvH4_1g19400 FvH4_1g19402 FvH4_1g19420 FvH4_1g19450 FvH4_1g19460 FvH4_1g19464 FvH4_1g19480
malus_domestica MD01G1041000.v1.1 MD15G1310300.v1.1
prunus_persica Prupe.6G203500_v2.0.a1 Prupe.6G203700_v2.0.a1 Prupe.6G203800_v2.0.a1 Prupe.6G203900_v2.0.a1 Prupe.6G204000_v2.0.a1
pyrus_communis pycom01g06860
rosa_chinensis RchiOBHm_Chr2g0110741 RchiOBHm_Chr2g0110761 RchiOBHm_Chr2g0110781 RchiOBHm_Chr2g0110791 RchiOBHm_Chr2g0110831 RchiOBHm_Chr2g0110841 RchiOBHm_Chr2g0110861 RchiOBHm_Chr2g0110881 RchiOBHm_Chr2g0110901 RchiOBHm_Chr2g0110931 RchiOBHm_Chr2g0111531
rosa_laevigata RLG00000017837 RLG00000017838 RLG00000017839 RLG00000017840 RLG00000017842 RLG00000017843 RLG00000017844 RLG00000017845 RLG00000017846 RLG00000017848 RLG00000017850 RLG00000017854 RLG00000017897
rosa_multiflora Rmu_co8508665.1_g000001 Rmu_sc0003291.1_g000004 Rmu_sc0003291.1_g000015 Rmu_sc0003291.1_g000016 Rmu_sc0003291.1_g000023 Rmu_sc0003291.1_g000029 Rmu_sc0003291.1_g000032 Rmu_sc0003994.1_g000017 Rmu_sc0003994.1_g000019
rosa_roxburghii Rroxscaffold_2G00132240 Rroxscaffold_2G00132800 Rroxscaffold_2G00132810 Rroxscaffold_2G00132830 Rroxscaffold_2G00132850 Rroxscaffold_2G00132900 Rroxscaffold_2G00132930 Rroxscaffold_2G00132940 Rroxscaffold_2G00132950 Rroxscaffold_2G00132970
rosa_rugosa Rorug02G0169400.1 Rorug02G0169500 Rorug02G0169500 Rorug02G0169500 Rorug02G0169600 Rorug02G0169700 Rorug02G0169800 Rorug02G0169900 Rorug02G0170000 Rorug02G0170100 Rorug02G0170200 Rorug02G0174900
rosa_samantha Rh2BG231600 Rh2BG231800 Rh2BG232100 Rh2BG232400 Rh2BG232600 Rh2BG232800 Rh2BG233200 Rh2BG233400 Rh2BG233700 Rh2BG239500 Rh2CG224000 Rh2CG224300 Rh2CG224400 Rh2CG224700 Rh2CG224800 Rh2CG225000 Rh2CG225200 Rh2CG225300 Rh2DG227900 Rh2DG228000 Rh2DG228100 Rh2DG228800 Rh2DG228900 Rh2DG229200 Rh2DG229400 Rh2DG229600 Rh2DG229800 Rh2DG229900 Rh2DG230200
rosa_wichuraiana Rw2G017100 Rw2G017110 Rw2G017130 Rw2G017140 Rw2G017150 Rw2G017170 Rw2G017580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 225
AccI GTMKAC 1 cut(s) 313
AccII CGCG 1 cut(s) 211
AciI CCGC 5 cut(s) 524, 565, 686, 803, 809
AclI AACGTT 1 cut(s) 177
AcuI CTGAAG 1 cut(s) 620
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 5 cut(s) 45, 285, 303, 914, 935
AfiI CCNNNNNNNGG 2 cut(s) 466, 492
AgeI ACCGGT 1 cut(s) 295
AgsI TTSAA 2 cut(s) 268, 877
AhlI ACTAGT 1 cut(s) 794
AluBI AGCT 2 cut(s) 240, 598
AluI AGCT 2 cut(s) 240, 598
Alw26I GTCTC 4 cut(s) 88, 159, 197, 885
Ama87I CYCGRG 1 cut(s) 643
AoxI GGCC 2 cut(s) 26, 864
ApaI GGGCCC 1 cut(s) 30
ApeKI GCWGC 1 cut(s) 5
AsiGI ACCGGT 1 cut(s) 295
AspA2I CCTAGG 1 cut(s) 460
AspLEI GCGC 2 cut(s) 211, 613
AspS9I GGNCC 4 cut(s) 26, 27, 97, 589
AsuHPI GGTGA 1 cut(s) 838
AvaI CYCGRG 1 cut(s) 643
AvaII GGWCC 2 cut(s) 97, 589
AvrII CCTAGG 1 cut(s) 460
BaeGI GKGCMC 1 cut(s) 30
BanII GRGCYC 1 cut(s) 30
BbsI GAAGAC 1 cut(s) 688
BbvCI CCTCAGC 1 cut(s) 818
BccI CCATC 1 cut(s) 817
BceAI ACGGC 2 cut(s) 222, 342
BcoDI GTCTC 4 cut(s) 88, 159, 197, 885
BcuI ACTAGT 1 cut(s) 794
BfaI CTAG 3 cut(s) 275, 461, 795
BglI GCCNNNNNGGC 1 cut(s) 116
BisI GCNGC 1 cut(s) 6
BlnI CCTAGG 1 cut(s) 460
BlsI GCNGC 1 cut(s) 7
Bme18I GGWCC 2 cut(s) 97, 589
BmeT110I CYCGRG 1 cut(s) 643
BmgT120I GGNCC 4 cut(s) 26, 27, 97, 589
BmiI GGNNCC 5 cut(s) 28, 98, 99, 590, 591
BmsI GCATC 2 cut(s) 417, 511
BpiI GAAGAC 1 cut(s) 688
Bpu10I CCTNAGC 1 cut(s) 818
BsaAI YACGTR 2 cut(s) 351, 916
BsaHI GRCGYC 1 cut(s) 222
BsaJI CCNNGG 5 cut(s) 114, 460, 715, 767, 867
BsaWI WCCGGW 4 cut(s) 67, 161, 295, 476
BsaXI ACNNNNNCTCC 2 cut(s) 70, 100
Bsc4I CCNNNNNNNGG 2 cut(s) 466, 492
Bse118I RCCGGY 2 cut(s) 295, 378
Bse1I ACTGG 2 cut(s) 374, 612
Bse3DI GCAATG 1 cut(s) 225
BseDI CCNNGG 5 cut(s) 114, 460, 715, 767, 867
BseGI GGATG 4 cut(s) 76, 526, 828, 959
BseLI CCNNNNNNNGG 2 cut(s) 466, 492
BseMI GCAATG 1 cut(s) 225
BseMII CTCAG 4 cut(s) 237, 491, 626, 809
BseNI ACTGG 2 cut(s) 374, 612
BseRI GAGGAG 3 cut(s) 250, 353, 563
BseSI GKGCMC 1 cut(s) 30
Bsh1236I CGCG 1 cut(s) 211
Bsh1285I CGRYCG 2 cut(s) 58, 300
BshFI GGCC 2 cut(s) 28, 866
BshTI ACCGGT 1 cut(s) 295
BsiEI CGRYCG 2 cut(s) 58, 300
BsiHKCI CYCGRG 1 cut(s) 643
BsiSI CCGG 7 cut(s) 68, 162, 257, 296, 379, 477, 536
BslFI GGGAC 3 cut(s) 83, 575, 785
BslI CCNNNNNNNGG 2 cut(s) 466, 492
BsmAI GTCTC 4 cut(s) 88, 159, 197, 885
BsmBI CGTCTC 2 cut(s) 159, 197
BsmFI GGGAC 3 cut(s) 83, 575, 785
BsmI GAATGC 2 cut(s) 410, 730
BsnI GGCC 2 cut(s) 28, 866
BsoBI CYCGRG 1 cut(s) 643
Bsp120I GGGCCC 1 cut(s) 26
Bsp1286I GDGCHC 1 cut(s) 30
Bsp1407I TGTACA 1 cut(s) 283
Bsp143I GATC 1 cut(s) 55
BspACI CCGC 5 cut(s) 524, 565, 686, 803, 809
BspANI GGCC 2 cut(s) 28, 866
BspCNI CTCAG 4 cut(s) 238, 492, 627, 810
BspFNI CGCG 1 cut(s) 211
BspLI GGNNCC 5 cut(s) 28, 98, 99, 590, 591
BsrDI GCAATG 1 cut(s) 225
BsrFI RCCGGY 2 cut(s) 295, 378
BsrGI TGTACA 1 cut(s) 283
BsrI ACTGG 2 cut(s) 374, 612
BssAI RCCGGY 2 cut(s) 295, 378
BssECI CCNNGG 5 cut(s) 114, 460, 715, 767, 867
BssMI GATC 1 cut(s) 55
BssNI GRCGYC 1 cut(s) 222
BssT1I CCWWGG 3 cut(s) 460, 715, 867
Bst4CI ACNGT 2 cut(s) 82, 115
Bst6I CTCTTC 2 cut(s) 834, 893
BstACI GRCGYC 1 cut(s) 222
BstAUI TGTACA 1 cut(s) 283
BstBAI YACGTR 2 cut(s) 351, 916
BstC8I GCNNGC 1 cut(s) 10
BstDEI CTNAG 5 cut(s) 22, 246, 500, 635, 818
BstDSI CCRYGG 1 cut(s) 114
BstF5I GGATG 4 cut(s) 76, 526, 828, 959
BstFNI CGCG 1 cut(s) 211
BstHHI GCGC 2 cut(s) 211, 613
BstKTI GATC 1 cut(s) 58
BstMAI GTCTC 4 cut(s) 88, 159, 197, 885
BstMBI GATC 1 cut(s) 55
BstMCI CGRYCG 2 cut(s) 58, 300
BstMWI GCNNNNNNNGC 1 cut(s) 116
BstSLI GKGCMC 1 cut(s) 30
BstUI CGCG 1 cut(s) 211
BstV2I GAAGAC 1 cut(s) 688
BsuRI GGCC 2 cut(s) 28, 866
BtgI CCRYGG 1 cut(s) 114
BtgZI GCGATG 1 cut(s) 440
BtsCI GGATG 4 cut(s) 76, 526, 828, 959
BtsIMutI CAGTG 1 cut(s) 78
Cac8I GCNNGC 1 cut(s) 10
CfoI GCGC 2 cut(s) 211, 613
Cfr10I RCCGGY 2 cut(s) 295, 378
Cfr13I GGNCC 4 cut(s) 26, 27, 97, 589
Csp6I GTAC 5 cut(s) 44, 284, 302, 913, 934
CspAI ACCGGT 1 cut(s) 295
CviAII CATG 3 cut(s) 199, 287, 512
CviQI GTAC 5 cut(s) 44, 284, 302, 913, 934
DdeI CTNAG 5 cut(s) 22, 246, 500, 635, 818
DpnI GATC 1 cut(s) 57
DpnII GATC 1 cut(s) 55
Eam1104I CTCTTC 2 cut(s) 834, 893
EarI CTCTTC 2 cut(s) 834, 893
EciI GGCGGA 1 cut(s) 824
Eco130I CCWWGG 3 cut(s) 460, 715, 867
Eco24I GRGCYC 1 cut(s) 30
Eco47I GGWCC 2 cut(s) 97, 589
Eco57I CTGAAG 1 cut(s) 620
Eco88I CYCGRG 1 cut(s) 643
EcoO109I RGGNCCY 3 cut(s) 26, 97, 589
EcoT14I CCWWGG 3 cut(s) 460, 715, 867
EcoT38I GRGCYC 1 cut(s) 30
ErhI CCWWGG 3 cut(s) 460, 715, 867
Esp3I CGTCTC 2 cut(s) 159, 197
FaeI CATG 3 cut(s) 202, 290, 515
FaqI GGGAC 3 cut(s) 83, 575, 785
FatI CATG 3 cut(s) 198, 286, 511
FauI CCCGC 1 cut(s) 558
FblI GTMKAC 1 cut(s) 313
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 3 cut(s) 83, 533, 835
FriOI GRGCYC 1 cut(s) 30
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 3 cut(s) 275, 461, 795
GlaI GCGC 2 cut(s) 210, 612
GluI GCNGC 1 cut(s) 6
HaeIII GGCC 2 cut(s) 28, 866
HapII CCGG 7 cut(s) 68, 162, 257, 296, 379, 477, 536
HhaI GCGC 2 cut(s) 211, 613
Hin1I GRCGYC 1 cut(s) 222
Hin1II CATG 3 cut(s) 202, 290, 515
Hin6I GCGC 2 cut(s) 209, 611
HinP1I GCGC 2 cut(s) 209, 611
HinfI GANTC 4 cut(s) 433, 617, 637, 812
HpaII CCGG 7 cut(s) 68, 162, 257, 296, 379, 477, 536
HphI GGTGA 1 cut(s) 838
Hpy166II GTNNAC 3 cut(s) 314, 792, 919
Hpy188I TCNGA 3 cut(s) 184, 416, 636
Hpy188III TCNNGA 1 cut(s) 437
Hpy8I GTNNAC 3 cut(s) 314, 792, 919
Hpy99I CGWCG 3 cut(s) 17, 40, 338
HpyAV CCTTC 7 cut(s) 281, 496, 554, 742, 829, 856, 871
HpyCH4III ACNGT 2 cut(s) 82, 115
HpyCH4IV ACGT 4 cut(s) 177, 222, 350, 915
HpyCH4V TGCA 2 cut(s) 410, 579
HpyF10VI GCNNNNNNNGC 1 cut(s) 116
HpyF3I CTNAG 5 cut(s) 22, 246, 500, 635, 818
HpySE526I ACGT 4 cut(s) 177, 222, 350, 915
Hsp92I GRCGYC 1 cut(s) 222
Hsp92II CATG 3 cut(s) 202, 290, 515
HspAI GCGC 2 cut(s) 209, 611
KflI GGGWCCC 2 cut(s) 97, 589
Kzo9I GATC 1 cut(s) 55
LmnI GCTCC 1 cut(s) 237
LweI GCATC 2 cut(s) 417, 511
MaeI CTAG 3 cut(s) 275, 461, 795
MaeII ACGT 4 cut(s) 177, 222, 350, 915
MaeIII GTNAC 5 cut(s) 50, 63, 218, 445, 638
MalI GATC 1 cut(s) 57
MboI GATC 1 cut(s) 55
MboII GAAGA 5 cut(s) 613, 693, 757, 851, 910
MhlI GDGCHC 1 cut(s) 30
MlyI GAGTC 4 cut(s) 442, 611, 646, 821
MmeI TCCRAC 1 cut(s) 629
MseI TTAA 2 cut(s) 671, 961
MslI CAYNNNNRTG 1 cut(s) 230
MspA1I CMGCKG 2 cut(s) 598, 688
MspI CCGG 7 cut(s) 68, 162, 257, 296, 379, 477, 536
Mva1269I GAATGC 2 cut(s) 410, 730
MvnI CGCG 1 cut(s) 211
MwoI GCNNNNNNNGC 1 cut(s) 116
NdeII GATC 1 cut(s) 55
NlaIII CATG 3 cut(s) 202, 290, 515
NlaIV GGNNCC 5 cut(s) 28, 98, 99, 590, 591
NmeAIII GCCGAG 2 cut(s) 456, 792
NmuCI GTSAC 4 cut(s) 50, 218, 445, 638
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 2 cut(s) 410, 730
PinAI ACCGGT 1 cut(s) 295
PkrI GCNGC 1 cut(s) 7
Ple19I CGATCG 1 cut(s) 58
PleI GAGTC 4 cut(s) 441, 611, 645, 820
PpsI GAGTC 4 cut(s) 441, 611, 645, 820
Ppu21I YACGTR 2 cut(s) 351, 916
PpuMI RGGWCCY 2 cut(s) 97, 589
Psp1406I AACGTT 1 cut(s) 177
Psp5II RGGWCCY 2 cut(s) 97, 589
PspN4I GGNNCC 5 cut(s) 28, 98, 99, 590, 591
PspOMI GGGCCC 1 cut(s) 26
PspPI GGNCC 4 cut(s) 26, 27, 97, 589
PspPPI RGGWCCY 2 cut(s) 97, 589
PvuI CGATCG 1 cut(s) 58
PvuII CAGCTG 1 cut(s) 598
RsaI GTAC 5 cut(s) 45, 285, 303, 914, 935
RsaNI GTAC 5 cut(s) 44, 284, 302, 913, 934
RseI CAYNNNNRTG 1 cut(s) 230
SaqAI TTAA 2 cut(s) 671, 961
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 55
Sau96I GGNCC 4 cut(s) 26, 27, 97, 589
SchI GAGTC 4 cut(s) 442, 611, 646, 821
SduI GDGCHC 1 cut(s) 30
SfaNI GCATC 2 cut(s) 417, 511
SinI GGWCC 2 cut(s) 97, 589
SmiMI CAYNNNNRTG 1 cut(s) 230
SpeI ACTAGT 1 cut(s) 794
SsiI CCGC 5 cut(s) 524, 565, 686, 803, 809
SspMI CTAG 3 cut(s) 275, 461, 795
StyI CCWWGG 3 cut(s) 460, 715, 867
TaaI ACNGT 2 cut(s) 82, 115
TaiI ACGT 4 cut(s) 180, 225, 353, 918
TaqI TCGA 4 cut(s) 132, 252, 320, 707
TatI WGTACW 1 cut(s) 283
Tru1I TTAA 2 cut(s) 671, 961
Tru9I TTAA 2 cut(s) 671, 961
TscAI CASTG 1 cut(s) 85
TseFI GTSAC 4 cut(s) 50, 218, 445, 638
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 4 cut(s) 50, 218, 445, 638
TspDTI ATGAA 2 cut(s) 187, 573
TspGWI ACGGA 3 cut(s) 434, 464, 798
TspRI CASTG 1 cut(s) 85
VpaK11BI GGWCC 2 cut(s) 97, 589
XmaJI CCTAGG 1 cut(s) 460
XmiI GTMKAC 1 cut(s) 313
XspI CTAG 3 cut(s) 275, 461, 795
ZraI GACGTC 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.