Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0009365

Physical Location & Seq

Genomic Coordinates Reverse (-)

8318584 .. 8325743

Gene Structure 7160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG092100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGACGGCGATCATCACAACCCCAATTCTGAACTCGAAGCCGACGCTTTGTCTTCTAGGGTTTCCGATTTCTCGCTGCACGAAGACATCCCCAATTCGAAAGTTCAATACCCGCCGATTGATAGAGAAGATAAAAATCGTACAGAGAATAAGTATAGTGATGAACCGAAAATGACAGAATCTAGAGAAGATGACTGTGAGGTACGTGGGAAGGATAACCAGGCATCAGAAGCCTGCCGTTCGGAGCGAAAGAAGTACTTTTATTATGATGCTCCACATTTTGAGGATACGGGGGTTTGGATACCTGTTTCCGTTCCCCCTATGTTGCAAACAGAGCATGAAGAGTGGGCGAAAGGTTTTTCCGCAAATGGGGGGTTCTTTCCTGAGAATGACATGGGTTGGGGCCAGTTTATTGGGGATGAGAAGGAGATGACTATGTGGGATGTGATGGTCGAGATGTTGCTTGCGGCCCGTGGGAAAGTAAGTTCATTGGCTTCCCCTGATATATATGGATGTAGACTTTCATGGATGTCCGACAATCTACTTGAGCAAGCATGGCAGGAAATGGCCCAAACACTCACAGATGCTAACCTGGCTCATGTACACGAAATTCTGGAAGCAGATCCACCAAAGTGGCTGGCCGATAGTTCTGCGTCTTCTTGTATGCTCTGTGGCGTGCAGTTTCATCCAATCATGTGCTCTAGGCATCACTGTCGGTTTTGTGGAGGAATATTTTGTGGTGACTGTTCCAAGGGAAGGAGTCTGTTGCCCAAAAAGTTTCGTGTTGCAGATCCTCAGCGAGTCTGTGATGTATGCTGTGTAAGACTTGAGTCTGTACAGCCGCATTTAATGGACCAAGTAAGTCATGCTGCTCAGGTGCCAACCCATGATCTTACTGACCTTAGCACTTTAAGATCATGGGTTAATATTCCTTGGGGACGGTCCATGGAGTATGAGATATATAAGGCGACAAATGCAATCCAGTGTTATAAGAAGGTATGTGCCCTAAAGCCTGAGAAGTCAATTCCCGATGCCATTCTAAGACAAGCAAAAGGCCTTGCAATAATCACTGCTGTCAAGGTTGGAGTTATGGTTACCTACAATATAGGTACAGGACTAGTGATTGCTCGCAGAGAAGATGGCTCTTGGTCCCCTCCATCTGCTGTTTCAACCTTCGGTGTAGGATGGGGAGCCCAGGCCGGAGGGGAGTTGACGGACTTTATCATTATTTTGAGAACAAGTGATGCTGTAAAGACATTCAGTGGTAATGCTCATCTGTCAGTAGGAGCCGGCTTGAGTGCTGCAGTTGGCCCCTTTGGAAGGGCAGCTGAAGCTGATTTTCGAGCCGGTGATGGTGGTTACGCTGCTTGTTATACGTACAGCTGCAGTAAAGGCGCATTTGTTGGATGTTCCCTTGAAGGCAGCATTGTAACCACCCGCACACAGGTGAATTCACAATTTTATGGCAGCCAGTCACTGAATGCACCAGATATACTTCTTGGCTCGTTGCCTAAGCCACCTGCGGCTGCCACTCTCTATCGTGCACTTTCAGATCTATATCAGAAGCTTGATCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FYVE Ysc84

Protein Analysis

525

Amino Acids

57.73

Weight (kDa)

5.37

Isoelectric Point (pI)

38.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FYVE	PF01363	211 - 277	1.9e-16	FYVE zinc finger
Ysc84	PF04366	393 - 518	7.7e-40	Las17-binding protein actin regulator

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29800 AT1G29800
fragaria_vesca	FvH4_3g07140 FvH4_3g07140 FvH4_3g07140
malus_domestica	MD00G1007600.v1.1 MD10G1274100.v1.1
prunus_persica	Prupe.4G068300_v2.0.a1 Prupe.4G068300_v2.0.a1
pyrus_communis	pycom05g27280 pycom10g22880
rosa_chinensis	RchiOBHm_Chr5g0011981
rosa_laevigata	RLG00000031876
rosa_multiflora	Rmu_sc0028144.1_g000001 Rmu_ssc0000009.1_g000036
rosa_roxburghii	Rroxscaffold_1G00064610
rosa_rugosa	Rorug04G0460200
rosa_samantha	Rh5AG092100 Rh5BG087900 Rh5CG101700 Rh5DG088500
rosa_wichuraiana	Rw5G008040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	990
AarI	CACCTGC	1 cut(s)	1528
Acc36I	ACCTGC	1 cut(s)	1528
AccB1I	GGYRCC	1 cut(s)	877
AccI	GTMKAC	1 cut(s)	517
AciI	CCGC	6 cut(s)	113, 363, 467, 842, 1438, 1523
AclWI	GGATC	2 cut(s)	617, 785
AcoI	YGGCCR	1 cut(s)	639
AcsI	RAATTY	2 cut(s)	609, 1450
AcuI	CTGAAG	1 cut(s)	1350
AfaI	GTAC	7 cut(s)	142, 204, 257, 603, 837, 1111, 1379
AfiI	CCNNNNNNNGG	4 cut(s)	369, 756, 1320, 1444
AgsI	TTSAA	3 cut(s)	107, 1170, 1418
AhdI	GACNNNNNGTC	1 cut(s)	49
AhlI	ACTAGT	1 cut(s)	1117
AjnI	CCWGG	3 cut(s)	219, 591, 1194
AleI	CACNNNNGTG	2 cut(s)	631, 1445
AloI	GAACNNNNNNTCC	2 cut(s)	469, 501
AluBI	AGCT	4 cut(s)	1328, 1334, 1383, 1567
AluI	AGCT	4 cut(s)	1328, 1334, 1383, 1567
Alw21I	GWGCWC	2 cut(s)	701, 1546
Alw44I	GTGCAC	1 cut(s)	1542
AlwI	GGATC	2 cut(s)	617, 785
AlwNI	CAGNNNCTG	1 cut(s)	1477
AoxI	GGCC	7 cut(s)	403, 468, 567, 639, 1054, 1197, 1309
ApaLI	GTGCAC	1 cut(s)	1542
ApeKI	GCWGC	9 cut(s)	76, 869, 1301, 1325, 1364, 1383, 1422, 1467, 1526
ApoI	RAATTY	2 cut(s)	609, 1450
AspLEI	GCGC	1 cut(s)	1397
AspS9I	GGNCC	7 cut(s)	403, 469, 568, 853, 942, 1149, 1310
AsuHPI	GGTGA	3 cut(s)	752, 1361, 1459
AsuII	TTCGAA	1 cut(s)	98
AvaII	GGWCC	3 cut(s)	853, 942, 1149
BaeGI	GKGCMC	2 cut(s)	1006, 1546
BaeI	ACNNNNGTAYC	2 cut(s)	279, 312
BanI	GGYRCC	1 cut(s)	877
BanII	GRGCYC	1 cut(s)	1195
BbsI	GAAGAC	3 cut(s)	45, 90, 648
Bbv12I	GWGCWC	2 cut(s)	701, 1546
BbvCI	CCTCAGC	1 cut(s)	795
BbvI	GCAGC	9 cut(s)	63, 856, 1288, 1337, 1351, 1370, 1434, 1479, 1513
BccI	CCATC	5 cut(s)	442, 1133, 1165, 1179, 1346
BceAI	ACGGC	2 cut(s)	22, 222
BcgI	CGANNNNNNTGC	4 cut(s)	632, 666, 695, 729
BciT130I	CCWGG	3 cut(s)	221, 593, 1196
BciVI	GTATCC	2 cut(s)	280, 294
BclI	TGATCA	1 cut(s)	1570
BcuI	ACTAGT	1 cut(s)	1117
BfaI	CTAG	4 cut(s)	57, 183, 702, 1118
BfmI	CTRYAG	2 cut(s)	1302, 1384
BfuAI	ACCTGC	1 cut(s)	1528
BfuI	GTATCC	2 cut(s)	280, 294
BglII	AGATCT	1 cut(s)	1552
BmcAI	AGTACT	1 cut(s)	257
Bme1390I	CCNGG	3 cut(s)	221, 593, 1196
Bme18I	GGWCC	3 cut(s)	853, 942, 1149
BmeRI	GACNNNNNGTC	1 cut(s)	49
BmgT120I	GGNCC	7 cut(s)	403, 469, 568, 853, 942, 1149, 1310
BmiI	GGNNCC	6 cut(s)	404, 879, 1151, 1192, 1288, 1312
BmrFI	CCNGG	3 cut(s)	221, 593, 1196
BmsI	GCATC	6 cut(s)	233, 259, 574, 715, 1021, 1234
BoxI	GACNNNNGTC	1 cut(s)	829
BpiI	GAAGAC	3 cut(s)	45, 90, 648
Bpu10I	CCTNAGC	4 cut(s)	795, 873, 902, 1512
Bpu14I	TTCGAA	1 cut(s)	98
BpuEI	CTTGAG	3 cut(s)	566, 848, 1315
BsaAI	YACGTR	2 cut(s)	206, 1377
BsaBI	GATNNNNATC	2 cut(s)	135, 1557
BsaJI	CCNNGG	5 cut(s)	472, 750, 932, 945, 1194
BsaXI	ACNNNNNCTCC	2 cut(s)	1077, 1107
Bsc4I	CCNNNNNNNGG	4 cut(s)	369, 756, 1320, 1444
Bse118I	RCCGGY	2 cut(s)	1289, 1346
Bse1I	ACTGG	3 cut(s)	406, 982, 1471
Bse8I	GATNNNNATC	2 cut(s)	135, 1557
BseBI	CCWGG	3 cut(s)	221, 593, 1196
BseDI	CCNNGG	5 cut(s)	472, 750, 932, 945, 1194
BseGI	GGATG	8 cut(s)	87, 424, 448, 518, 534, 685, 1190, 1412
BseJI	GATNNNNATC	2 cut(s)	135, 1557
BseLI	CCNNNNNNNGG	4 cut(s)	369, 756, 1320, 1444
BseMII	CTCAG	4 cut(s)	375, 809, 887, 1005
BseNI	ACTGG	3 cut(s)	406, 982, 1471
BseSI	GKGCMC	2 cut(s)	1006, 1546
BseXI	GCAGC	9 cut(s)	63, 856, 1288, 1337, 1351, 1370, 1434, 1479, 1513
BsgI	GTGCAG	2 cut(s)	62, 698
BshFI	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1311
BshNI	GGYRCC	1 cut(s)	877
BsiHKAI	GWGCWC	2 cut(s)	701, 1546
BsiSI	CCGG	3 cut(s)	1200, 1290, 1347
BslFI	GGGAC	2 cut(s)	951, 1135
BslI	CCNNNNNNNGG	4 cut(s)	369, 756, 1320, 1444
BsmFI	GGGAC	2 cut(s)	951, 1135
BsmI	GAATGC	1 cut(s)	1486
BsnI	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1311
Bsp119I	TTCGAA	1 cut(s)	98
Bsp1286I	GDGCHC	4 cut(s)	701, 1006, 1195, 1546
Bsp1407I	TGTACA	2 cut(s)	601, 835
Bsp143I	GATC	7 cut(s)	10, 622, 790, 889, 914, 1552, 1570
Bsp19I	CCATGG	1 cut(s)	945
BspACI	CCGC	6 cut(s)	113, 363, 467, 842, 1438, 1523
BspANI	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1311
BspCNI	CTCAG	4 cut(s)	376, 808, 886, 1006
BspLI	GGNNCC	6 cut(s)	404, 879, 1151, 1192, 1288, 1312
BspMAI	CTGCAG	2 cut(s)	1306, 1388
BspMI	ACCTGC	1 cut(s)	1528
BspPI	GGATC	2 cut(s)	617, 785
BspT104I	TTCGAA	1 cut(s)	98
BspT107I	GGYRCC	1 cut(s)	877
BsrFI	RCCGGY	2 cut(s)	1289, 1346
BsrGI	TGTACA	2 cut(s)	601, 835
BsrI	ACTGG	3 cut(s)	406, 982, 1471
BssAI	RCCGGY	2 cut(s)	1289, 1346
BssECI	CCNNGG	5 cut(s)	472, 750, 932, 945, 1194
BssMI	GATC	7 cut(s)	10, 622, 790, 889, 914, 1552, 1570
BssT1I	CCWWGG	3 cut(s)	750, 932, 945
Bst2UI	CCWGG	3 cut(s)	221, 593, 1196
Bst4CI	ACNGT	4 cut(s)	197, 713, 746, 942
Bst6I	CTCTTC	1 cut(s)	336
BstAUI	TGTACA	2 cut(s)	601, 835
BstBAI	YACGTR	2 cut(s)	206, 1377
BstBI	TTCGAA	1 cut(s)	98
BstC8I	GCNNGC	7 cut(s)	235, 465, 552, 639, 677, 1129, 1291
BstDEI	CTNAG	7 cut(s)	384, 795, 873, 902, 1014, 1040, 1512
BstDSI	CCRYGG	2 cut(s)	472, 945
BstEII	GGTNACC	1 cut(s)	1093
BstENI	CCTNNNNNAGG	1 cut(s)	1318
BstF5I	GGATG	8 cut(s)	87, 424, 448, 518, 534, 685, 1190, 1412
BstHHI	GCGC	1 cut(s)	1397
BstKTI	GATC	7 cut(s)	13, 625, 793, 892, 917, 1555, 1573
BstMBI	GATC	7 cut(s)	10, 622, 790, 889, 914, 1552, 1570
BstMWI	GCNNNNNNNGC	7 cut(s)	230, 334, 556, 593, 974, 1331, 1392
BstNI	CCWGG	3 cut(s)	221, 593, 1196
BstPAI	GACNNNNGTC	1 cut(s)	829
BstPI	GGTNACC	1 cut(s)	1093
BstSCI	CCNGG	3 cut(s)	219, 591, 1194
BstSFI	CTRYAG	2 cut(s)	1302, 1384
BstSLI	GKGCMC	2 cut(s)	1006, 1546
BstSNI	TACGTA	1 cut(s)	1377
BstV1I	GCAGC	9 cut(s)	63, 856, 1288, 1337, 1351, 1370, 1434, 1479, 1513
BstV2I	GAAGAC	3 cut(s)	45, 90, 648
BstX2I	RGATCY	3 cut(s)	622, 790, 1552
BstXI	CCANNNNNNTGG	2 cut(s)	413, 633
BstYI	RGATCY	3 cut(s)	622, 790, 1552
BsuI	GTATCC	2 cut(s)	280, 294
BsuRI	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1311
BtgI	CCRYGG	2 cut(s)	472, 945
BtsCI	GGATG	8 cut(s)	87, 424, 448, 518, 534, 685, 1190, 1412
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	5 cut(s)	709, 989, 1068, 1267, 1475
BveI	ACCTGC	1 cut(s)	1528
Cac8I	GCNNGC	7 cut(s)	235, 465, 552, 639, 677, 1129, 1291
CaiI	CAGNNNCTG	1 cut(s)	1477
CfoI	GCGC	1 cut(s)	1397
Cfr10I	RCCGGY	2 cut(s)	1289, 1346
Cfr13I	GGNCC	7 cut(s)	403, 469, 568, 853, 942, 1149, 1310
CseI	GACGC	2 cut(s)	53, 642
Csp6I	GTAC	7 cut(s)	141, 203, 256, 602, 836, 1110, 1378
CviQI	GTAC	7 cut(s)	141, 203, 256, 602, 836, 1110, 1378
DdeI	CTNAG	7 cut(s)	384, 795, 873, 902, 1014, 1040, 1512
DpnI	GATC	7 cut(s)	12, 624, 792, 891, 916, 1554, 1572
DpnII	GATC	7 cut(s)	10, 622, 790, 889, 914, 1552, 1570
DriI	GACNNNNNGTC	1 cut(s)	49
EaeI	YGGCCR	1 cut(s)	639
Eam1104I	CTCTTC	1 cut(s)	336
Eam1105I	GACNNNNNGTC	1 cut(s)	49
EarI	CTCTTC	1 cut(s)	336
Eco105I	TACGTA	1 cut(s)	1377
Eco130I	CCWWGG	3 cut(s)	750, 932, 945
Eco147I	AGGCCT	1 cut(s)	1056
Eco24I	GRGCYC	1 cut(s)	1195
Eco47I	GGWCC	3 cut(s)	853, 942, 1149
Eco57I	CTGAAG	1 cut(s)	1350
Eco91I	GGTNACC	1 cut(s)	1093
EcoNI	CCTNNNNNAGG	1 cut(s)	1318
EcoO65I	GGTNACC	1 cut(s)	1093
EcoRI	GAATTC	1 cut(s)	1450
EcoRII	CCWGG	3 cut(s)	219, 591, 1194
EcoT14I	CCWWGG	3 cut(s)	750, 932, 945
EcoT38I	GRGCYC	1 cut(s)	1195
ErhI	CCWWGG	3 cut(s)	750, 932, 945
FalI	AAGNNNNNCTT	2 cut(s)	242, 274
FaqI	GGGAC	2 cut(s)	951, 1135
FauI	CCCGC	2 cut(s)	120, 1445
FbaI	TGATCA	1 cut(s)	1570
FblI	GTMKAC	1 cut(s)	517
FokI	GGATG	8 cut(s)	74, 431, 455, 525, 541, 672, 1197, 1419
FriOI	GRGCYC	1 cut(s)	1195
FspBI	CTAG	4 cut(s)	57, 183, 702, 1118
GlaI	GCGC	1 cut(s)	1396
HaeIII	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1311
HapII	CCGG	3 cut(s)	1200, 1290, 1347
HgaI	GACGC	2 cut(s)	53, 642
HhaI	GCGC	1 cut(s)	1397
Hin6I	GCGC	1 cut(s)	1395
HinP1I	GCGC	1 cut(s)	1395
HincII	GTYRAC	1 cut(s)	1212
HindII	GTYRAC	1 cut(s)	1212
HindIII	AAGCTT	1 cut(s)	1565
HinfI	GANTC	4 cut(s)	179, 760, 801, 830
HpaII	CCGG	3 cut(s)	1200, 1290, 1347
HphI	GGTGA	3 cut(s)	752, 1361, 1459
Hpy166II	GTNNAC	4 cut(s)	518, 604, 1212, 1544
Hpy188I	TCNGA	7 cut(s)	31, 67, 229, 244, 535, 1552, 1563
Hpy188III	TCNNGA	5 cut(s)	183, 383, 454, 614, 1028
Hpy8I	GTNNAC	4 cut(s)	518, 604, 1212, 1544
Hpy99I	CGWCG	1 cut(s)	47
HpyAV	CCTTC	7 cut(s)	205, 418, 750, 988, 1183, 1314, 1412
HpyCH4III	ACNGT	4 cut(s)	197, 713, 746, 942
HpyCH4IV	ACGT	2 cut(s)	205, 1376
HpyF10VI	GCNNNNNNNGC	7 cut(s)	230, 334, 556, 593, 974, 1331, 1392
HpyF3I	CTNAG	7 cut(s)	384, 795, 873, 902, 1014, 1040, 1512
HpySE526I	ACGT	2 cut(s)	205, 1376
HspAI	GCGC	1 cut(s)	1395
KroI	GCCGGC	1 cut(s)	1289
KroNI	GCCGGC	1 cut(s)	1291
Ksp22I	TGATCA	1 cut(s)	1570
Kzo9I	GATC	7 cut(s)	10, 622, 790, 889, 914, 1552, 1570
LmnI	GCTCC	4 cut(s)	244, 277, 1190, 1286
Lsp1109I	GCAGC	9 cut(s)	63, 856, 1288, 1337, 1351, 1370, 1434, 1479, 1513
LweI	GCATC	6 cut(s)	233, 259, 574, 715, 1021, 1234
MaeI	CTAG	4 cut(s)	57, 183, 702, 1118
MaeII	ACGT	2 cut(s)	205, 1376
MaeIII	GTNAC	5 cut(s)	740, 1093, 1358, 1429, 1473
MalI	GATC	7 cut(s)	12, 624, 792, 891, 916, 1554, 1572
MboI	GATC	7 cut(s)	10, 622, 790, 889, 914, 1552, 1570
MboII	GAAGA	7 cut(s)	45, 95, 140, 200, 353, 648, 1148
MflI	RGATCY	3 cut(s)	622, 790, 1552
MhlI	GDGCHC	4 cut(s)	701, 1006, 1195, 1546
MluCI	AATT	6 cut(s)	25, 94, 609, 1023, 1450, 1457
MlyI	GAGTC	3 cut(s)	769, 810, 839
MmeI	TCCRAC	3 cut(s)	558, 1063, 1384
MnlI	CCTC	6 cut(s)	193, 277, 719, 804, 1164, 1196
MroNI	GCCGGC	1 cut(s)	1289
MseI	TTAA	3 cut(s)	848, 911, 924
MslI	CAYNNNNRTG	2 cut(s)	631, 1445
MspA1I	CMGCKG	2 cut(s)	1328, 1383
MspI	CCGG	3 cut(s)	1200, 1290, 1347
MspR9I	CCNGG	3 cut(s)	221, 593, 1196
Mva1269I	GAATGC	1 cut(s)	1486
MvaI	CCWGG	3 cut(s)	221, 593, 1196
MwoI	GCNNNNNNNGC	7 cut(s)	230, 334, 556, 593, 974, 1331, 1392
NaeI	GCCGGC	1 cut(s)	1291
NcoI	CCATGG	1 cut(s)	945
NdeII	GATC	7 cut(s)	10, 622, 790, 889, 914, 1552, 1570
NgoMIV	GCCGGC	1 cut(s)	1289
NlaIV	GGNNCC	6 cut(s)	404, 879, 1151, 1192, 1288, 1312
NmuCI	GTSAC	2 cut(s)	740, 1473
NspV	TTCGAA	1 cut(s)	98
OliI	CACNNNNGTG	2 cut(s)	631, 1445
PaqCI	CACCTGC	1 cut(s)	1528
PceI	AGGCCT	1 cut(s)	1056
PctI	GAATGC	1 cut(s)	1486
PdiI	GCCGGC	1 cut(s)	1291
PfeI	GAWTC	1 cut(s)	179
PleI	GAGTC	3 cut(s)	768, 809, 838
PpsI	GAGTC	3 cut(s)	768, 809, 838
Ppu21I	YACGTR	2 cut(s)	206, 1377
PshAI	GACNNNNGTC	1 cut(s)	829
PsiI	TTATAA	1 cut(s)	990
Psp6I	CCWGG	3 cut(s)	219, 591, 1194
PspEI	GGTNACC	1 cut(s)	1093
PspGI	CCWGG	3 cut(s)	219, 591, 1194
PspN4I	GGNNCC	6 cut(s)	404, 879, 1151, 1192, 1288, 1312
PspPI	GGNCC	7 cut(s)	403, 469, 568, 853, 942, 1149, 1310
PstI	CTGCAG	2 cut(s)	1306, 1388
PstNI	CAGNNNCTG	1 cut(s)	1477
PsuI	RGATCY	3 cut(s)	622, 790, 1552
PvuII	CAGCTG	2 cut(s)	1328, 1383
RsaI	GTAC	7 cut(s)	142, 204, 257, 603, 837, 1111, 1379
RsaNI	GTAC	7 cut(s)	141, 203, 256, 602, 836, 1110, 1378
RseI	CAYNNNNRTG	2 cut(s)	631, 1445
SaqAI	TTAA	3 cut(s)	848, 911, 924
Sau3AI	GATC	7 cut(s)	10, 622, 790, 889, 914, 1552, 1570
Sau96I	GGNCC	7 cut(s)	403, 469, 568, 853, 942, 1149, 1310
ScaI	AGTACT	1 cut(s)	257
SchI	GAGTC	3 cut(s)	769, 810, 839
ScrFI	CCNGG	3 cut(s)	221, 593, 1196
SduI	GDGCHC	4 cut(s)	701, 1006, 1195, 1546
SfaNI	GCATC	6 cut(s)	233, 259, 574, 715, 1021, 1234
SfcI	CTRYAG	2 cut(s)	1302, 1384
SfuI	TTCGAA	1 cut(s)	98
SinI	GGWCC	3 cut(s)	853, 942, 1149
SmiMI	CAYNNNNRTG	2 cut(s)	631, 1445
SmlI	CTYRAG	3 cut(s)	545, 827, 1294
SmoI	CTYRAG	3 cut(s)	545, 827, 1294
SnaBI	TACGTA	1 cut(s)	1377
SpeI	ACTAGT	1 cut(s)	1117
Sse9I	AATT	6 cut(s)	25, 94, 609, 1023, 1450, 1457
SseBI	AGGCCT	1 cut(s)	1056
SsiI	CCGC	6 cut(s)	113, 363, 467, 842, 1438, 1523
SspI	AATATT	2 cut(s)	732, 928
SspMI	CTAG	4 cut(s)	57, 183, 702, 1118
StuI	AGGCCT	1 cut(s)	1056
StyD4I	CCNGG	3 cut(s)	219, 591, 1194
StyI	CCWWGG	3 cut(s)	750, 932, 945
TaaI	ACNGT	4 cut(s)	197, 713, 746, 942
TaiI	ACGT	2 cut(s)	208, 1379
TaqI	TCGA	4 cut(s)	36, 98, 453, 1342
TasI	AATT	6 cut(s)	25, 94, 609, 1023, 1450, 1457
TatI	WGTACW	3 cut(s)	255, 601, 835
TauI	GCSGC	3 cut(s)	470, 844, 1526
TfiI	GAWTC	1 cut(s)	179
Tru1I	TTAA	3 cut(s)	848, 911, 924
Tru9I	TTAA	3 cut(s)	848, 911, 924
TscAI	CASTG	5 cut(s)	716, 989, 1075, 1267, 1482
TseFI	GTSAC	2 cut(s)	740, 1473
TseI	GCWGC	9 cut(s)	76, 869, 1301, 1325, 1364, 1383, 1422, 1467, 1526
Tsp45I	GTSAC	2 cut(s)	740, 1473
TspDTI	ATGAA	5 cut(s)	177, 354, 477, 513, 674
TspGWI	ACGGA	2 cut(s)	301, 1229
TspRI	CASTG	5 cut(s)	716, 989, 1075, 1267, 1482
VneI	GTGCAC	1 cut(s)	1542
VpaK11BI	GGWCC	3 cut(s)	853, 942, 1149
XagI	CCTNNNNNAGG	1 cut(s)	1318
XapI	RAATTY	2 cut(s)	609, 1450
XbaI	TCTAGA	1 cut(s)	182
XmiI	GTMKAC	1 cut(s)	517
XspI	CTAG	4 cut(s)	57, 183, 702, 1118
ZrmI	AGTACT	1 cut(s)	257

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.