Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0106871 RchiOBHm_Chr4g0402291 RchiOBHm_Chr5g0032071 RchiOBHm_Chr5g0038981 |
| rosa_laevigata | RLG00000019627 |
| rosa_samantha | Rh2BG201800 Rh5BG223600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 282 |
| AfaI | GTAC | 1 cut(s) | 279 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 188, 328 |
| AluBI | AGCT | 4 cut(s) | 311, 419, 437, 497 |
| AluI | AGCT | 4 cut(s) | 311, 419, 437, 497 |
| Alw21I | GWGCWC | 1 cut(s) | 499 |
| Alw26I | GTCTC | 1 cut(s) | 203 |
| AlwI | GGATC | 1 cut(s) | 282 |
| AoxI | GGCC | 2 cut(s) | 133, 367 |
| ApeKI | GCWGC | 1 cut(s) | 437 |
| AseI | ATTAAT | 1 cut(s) | 162 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 459 |
| AspS9I | GGNCC | 1 cut(s) | 133 |
| BanII | GRGCYC | 1 cut(s) | 499 |
| BbsI | GAAGAC | 2 cut(s) | 137, 367 |
| Bbv12I | GWGCWC | 1 cut(s) | 499 |
| BbvI | GCAGC | 1 cut(s) | 424 |
| BccI | CCATC | 3 cut(s) | 50, 246, 395 |
| BcoDI | GTCTC | 1 cut(s) | 203 |
| BfaI | CTAG | 5 cut(s) | 51, 114, 273, 357, 467 |
| BisI | GCNGC | 1 cut(s) | 438 |
| BlsI | GCNGC | 1 cut(s) | 439 |
| BmgT120I | GGNCC | 1 cut(s) | 133 |
| BmiI | GGNNCC | 1 cut(s) | 334 |
| BpiI | GAAGAC | 2 cut(s) | 137, 367 |
| BsaJI | CCNNGG | 1 cut(s) | 237 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 188, 328 |
| Bse3DI | GCAATG | 1 cut(s) | 525 |
| BseDI | CCNNGG | 1 cut(s) | 237 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 188, 328 |
| BseMI | GCAATG | 1 cut(s) | 525 |
| BseMII | CTCAG | 2 cut(s) | 86, 491 |
| BseXI | GCAGC | 1 cut(s) | 424 |
| BshFI | GGCC | 2 cut(s) | 135, 369 |
| BsiHKAI | GWGCWC | 1 cut(s) | 499 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 188, 328 |
| BsmAI | GTCTC | 1 cut(s) | 203 |
| BsmI | GAATGC | 1 cut(s) | 358 |
| BsnI | GGCC | 2 cut(s) | 135, 369 |
| Bsp1286I | GDGCHC | 1 cut(s) | 499 |
| Bsp143I | GATC | 1 cut(s) | 287 |
| BspANI | GGCC | 2 cut(s) | 135, 369 |
| BspCNI | CTCAG | 2 cut(s) | 87, 492 |
| BspLI | GGNNCC | 1 cut(s) | 334 |
| BspPI | GGATC | 1 cut(s) | 282 |
| BsrDI | GCAATG | 1 cut(s) | 525 |
| BssECI | CCNNGG | 1 cut(s) | 237 |
| BssMI | GATC | 1 cut(s) | 287 |
| Bst6I | CTCTTC | 1 cut(s) | 268 |
| BstDEI | CTNAG | 2 cut(s) | 95, 500 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 326 |
| BstKTI | GATC | 1 cut(s) | 290 |
| BstMAI | GTCTC | 1 cut(s) | 203 |
| BstMBI | GATC | 1 cut(s) | 287 |
| BstNSI | RCATGY | 1 cut(s) | 181 |
| BstV1I | GCAGC | 1 cut(s) | 424 |
| BstV2I | GAAGAC | 2 cut(s) | 137, 367 |
| BstX2I | RGATCY | 1 cut(s) | 287 |
| BstYI | RGATCY | 1 cut(s) | 287 |
| BsuRI | GGCC | 2 cut(s) | 135, 369 |
| BtgZI | GCGATG | 1 cut(s) | 92 |
| Cfr13I | GGNCC | 1 cut(s) | 133 |
| Csp6I | GTAC | 1 cut(s) | 278 |
| CviAII | CATG | 3 cut(s) | 130, 178, 371 |
| CviQI | GTAC | 1 cut(s) | 278 |
| DdeI | CTNAG | 2 cut(s) | 95, 500 |
| DpnI | GATC | 1 cut(s) | 289 |
| DpnII | GATC | 1 cut(s) | 287 |
| DraI | TTTAAA | 1 cut(s) | 430 |
| Eam1104I | CTCTTC | 1 cut(s) | 268 |
| EarI | CTCTTC | 1 cut(s) | 268 |
| Ecl136II | GAGCTC | 1 cut(s) | 497 |
| Eco24I | GRGCYC | 1 cut(s) | 499 |
| Eco53kI | GAGCTC | 1 cut(s) | 497 |
| EcoICRI | GAGCTC | 1 cut(s) | 497 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 326 |
| EcoT38I | GRGCYC | 1 cut(s) | 499 |
| FaeI | CATG | 3 cut(s) | 133, 181, 374 |
| FaiI | YATR | 7 cut(s) | 105, 131, 179, 317, 342, 372, 483 |
| FatI | CATG | 3 cut(s) | 129, 177, 370 |
| Fnu4HI | GCNGC | 1 cut(s) | 438 |
| FriOI | GRGCYC | 1 cut(s) | 499 |
| Fsp4HI | GCNGC | 1 cut(s) | 438 |
| FspBI | CTAG | 5 cut(s) | 51, 114, 273, 357, 467 |
| GluI | GCNGC | 1 cut(s) | 438 |
| HaeIII | GGCC | 2 cut(s) | 135, 369 |
| Hin1II | CATG | 3 cut(s) | 133, 181, 374 |
| HincII | GTYRAC | 1 cut(s) | 390 |
| HindII | GTYRAC | 1 cut(s) | 390 |
| HpaI | GTTAAC | 1 cut(s) | 390 |
| Hpy166II | GTNNAC | 2 cut(s) | 278, 390 |
| Hpy188I | TCNGA | 3 cut(s) | 96, 241, 501 |
| Hpy188III | TCNNGA | 2 cut(s) | 149, 285 |
| Hpy8I | GTNNAC | 2 cut(s) | 278, 390 |
| HpyAV | CCTTC | 1 cut(s) | 466 |
| HpyCH4V | TGCA | 2 cut(s) | 8, 440 |
| HpyF3I | CTNAG | 2 cut(s) | 95, 500 |
| Hsp92II | CATG | 3 cut(s) | 133, 181, 374 |
| KspAI | GTTAAC | 1 cut(s) | 390 |
| Kzo9I | GATC | 1 cut(s) | 287 |
| LmnI | GCTCC | 1 cut(s) | 494 |
| LpnPI | CCDG | 1 cut(s) | 321 |
| Lsp1109I | GCAGC | 1 cut(s) | 424 |
| MaeI | CTAG | 5 cut(s) | 51, 114, 273, 357, 467 |
| MalI | GATC | 1 cut(s) | 289 |
| MboI | GATC | 1 cut(s) | 287 |
| MboII | GAAGA | 5 cut(s) | 137, 254, 255, 367, 410 |
| MflI | RGATCY | 1 cut(s) | 287 |
| MhlI | GDGCHC | 1 cut(s) | 499 |
| MluCI | AATT | 2 cut(s) | 19, 32 |
| MnlI | CCTC | 5 cut(s) | 60, 146, 247, 353, 495 |
| MroXI | GAANNNNTTC | 1 cut(s) | 459 |
| MseI | TTAA | 7 cut(s) | 15, 123, 162, 324, 389, 429, 532 |
| Mva1269I | GAATGC | 1 cut(s) | 358 |
| NdeII | GATC | 1 cut(s) | 287 |
| NlaIII | CATG | 3 cut(s) | 133, 181, 374 |
| NlaIV | GGNNCC | 1 cut(s) | 334 |
| NspI | RCATGY | 1 cut(s) | 181 |
| PctI | GAATGC | 1 cut(s) | 358 |
| PdmI | GAANNNNTTC | 1 cut(s) | 459 |
| PkrI | GCNGC | 1 cut(s) | 439 |
| PshBI | ATTAAT | 1 cut(s) | 162 |
| Psp124BI | GAGCTC | 1 cut(s) | 499 |
| PspN4I | GGNNCC | 1 cut(s) | 334 |
| PspPI | GGNCC | 1 cut(s) | 133 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 325, 357 |
| PsuI | RGATCY | 1 cut(s) | 287 |
| RsaI | GTAC | 1 cut(s) | 279 |
| RsaNI | GTAC | 1 cut(s) | 278 |
| SacI | GAGCTC | 1 cut(s) | 499 |
| SaqAI | TTAA | 7 cut(s) | 15, 123, 162, 324, 389, 429, 532 |
| SatI | GCNGC | 1 cut(s) | 438 |
| Sau3AI | GATC | 1 cut(s) | 287 |
| Sau96I | GGNCC | 1 cut(s) | 133 |
| SduI | GDGCHC | 1 cut(s) | 499 |
| SetI | ASST | 7 cut(s) | 313, 364, 421, 439, 477, 499, 506 |
| Sse9I | AATT | 2 cut(s) | 19, 32 |
| SspMI | CTAG | 5 cut(s) | 51, 114, 273, 357, 467 |
| SstI | GAGCTC | 1 cut(s) | 499 |
| TasI | AATT | 2 cut(s) | 19, 32 |
| TatI | WGTACW | 1 cut(s) | 277 |
| Tru1I | TTAA | 7 cut(s) | 15, 123, 162, 324, 389, 429, 532 |
| Tru9I | TTAA | 7 cut(s) | 15, 123, 162, 324, 389, 429, 532 |
| TseI | GCWGC | 1 cut(s) | 437 |
| TspDTI | ATGAA | 2 cut(s) | 329, 524 |
| VspI | ATTAAT | 1 cut(s) | 162 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 326 |
| XceI | RCATGY | 1 cut(s) | 181 |
| XmnI | GAANNNNTTC | 1 cut(s) | 459 |
| XspI | CTAG | 5 cut(s) | 51, 114, 273, 357, 467 |