60S ribosomal Protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0182031 |
| rosa_roxburghii | Rroxscaffold_3G00220910 Rroxscaffold_6G00388730 |
| rosa_samantha | Rh5BG256800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 61 |
| AclWI | GGATC | 1 cut(s) | 28 |
| AcvI | CACGTG | 1 cut(s) | 99 |
| AfaI | GTAC | 1 cut(s) | 133 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 43 |
| AgsI | TTSAA | 2 cut(s) | 16, 167 |
| AjnI | CCWGG | 1 cut(s) | 42 |
| AluBI | AGCT | 1 cut(s) | 196 |
| AluI | AGCT | 1 cut(s) | 196 |
| AlwI | GGATC | 1 cut(s) | 28 |
| Ama87I | CYCGRG | 1 cut(s) | 135 |
| AoxI | GGCC | 2 cut(s) | 27, 81 |
| ApeKI | GCWGC | 1 cut(s) | 196 |
| AvaI | CYCGRG | 1 cut(s) | 135 |
| BbrPI | CACGTG | 1 cut(s) | 99 |
| BbvI | GCAGC | 1 cut(s) | 183 |
| BccI | CCATC | 1 cut(s) | 92 |
| BceAI | ACGGC | 2 cut(s) | 14, 167 |
| BciT130I | CCWGG | 1 cut(s) | 44 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 66 |
| BisI | GCNGC | 2 cut(s) | 61, 197 |
| BlsI | GCNGC | 2 cut(s) | 62, 198 |
| BmcAI | AGTACT | 1 cut(s) | 133 |
| Bme1390I | CCNGG | 1 cut(s) | 44 |
| BmeT110I | CYCGRG | 1 cut(s) | 135 |
| BmrFI | CCNGG | 1 cut(s) | 44 |
| BmsI | GCATC | 1 cut(s) | 78 |
| BsaAI | YACGTR | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 1 cut(s) | 43 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 43 |
| BseBI | CCWGG | 1 cut(s) | 44 |
| BseDI | CCNNGG | 1 cut(s) | 43 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BseXI | GCAGC | 1 cut(s) | 183 |
| BshFI | GGCC | 2 cut(s) | 29, 83 |
| BsiHKCI | CYCGRG | 1 cut(s) | 135 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BsnI | GGCC | 2 cut(s) | 29, 83 |
| BsoBI | CYCGRG | 1 cut(s) | 135 |
| Bsp143I | GATC | 1 cut(s) | 33 |
| BspACI | CCGC | 1 cut(s) | 61 |
| BspANI | GGCC | 2 cut(s) | 29, 83 |
| BspPI | GGATC | 1 cut(s) | 28 |
| BssECI | CCNNGG | 1 cut(s) | 43 |
| BssMI | GATC | 1 cut(s) | 33 |
| Bst2UI | CCWGG | 1 cut(s) | 44 |
| Bst6I | CTCTTC | 1 cut(s) | 44 |
| BstBAI | YACGTR | 1 cut(s) | 99 |
| BstC8I | GCNNGC | 1 cut(s) | 58 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 41 |
| BstKTI | GATC | 1 cut(s) | 36 |
| BstMBI | GATC | 1 cut(s) | 33 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 57, 66 |
| BstNI | CCWGG | 1 cut(s) | 44 |
| BstSCI | CCNGG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 1 cut(s) | 183 |
| BsuRI | GGCC | 2 cut(s) | 29, 83 |
| Cac8I | GCNNGC | 1 cut(s) | 58 |
| Csp6I | GTAC | 1 cut(s) | 132 |
| CviAII | CATG | 2 cut(s) | 160, 200 |
| CviJI | RGCY | 5 cut(s) | 19, 29, 60, 83, 196 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 29, 60, 83, 196 |
| CviQI | GTAC | 1 cut(s) | 132 |
| DpnI | GATC | 1 cut(s) | 35 |
| DpnII | GATC | 1 cut(s) | 33 |
| Eam1104I | CTCTTC | 1 cut(s) | 44 |
| EarI | CTCTTC | 1 cut(s) | 44 |
| Eco72I | CACGTG | 1 cut(s) | 99 |
| Eco88I | CYCGRG | 1 cut(s) | 135 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 41 |
| EcoRII | CCWGG | 1 cut(s) | 42 |
| FaeI | CATG | 2 cut(s) | 163, 203 |
| FaiI | YATR | 2 cut(s) | 161, 201 |
| FatI | CATG | 2 cut(s) | 159, 199 |
| Fnu4HI | GCNGC | 2 cut(s) | 61, 197 |
| Fsp4HI | GCNGC | 2 cut(s) | 61, 197 |
| GluI | GCNGC | 2 cut(s) | 61, 197 |
| HaeIII | GGCC | 2 cut(s) | 29, 83 |
| Hin1II | CATG | 2 cut(s) | 163, 203 |
| HinfI | GANTC | 3 cut(s) | 122, 145, 163 |
| Hpy188III | TCNNGA | 1 cut(s) | 126 |
| Hpy99I | CGWCG | 2 cut(s) | 118, 153 |
| HpyAV | CCTTC | 2 cut(s) | 73, 86 |
| HpyCH4IV | ACGT | 1 cut(s) | 98 |
| HpyCH4V | TGCA | 2 cut(s) | 175, 199 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 57, 66 |
| HpySE526I | ACGT | 1 cut(s) | 98 |
| Hsp92II | CATG | 2 cut(s) | 163, 203 |
| Kzo9I | GATC | 1 cut(s) | 33 |
| LpnPI | CCDG | 4 cut(s) | 29, 56, 70, 132 |
| Lsp1109I | GCAGC | 1 cut(s) | 183 |
| LweI | GCATC | 1 cut(s) | 78 |
| MaeII | ACGT | 1 cut(s) | 98 |
| MalI | GATC | 1 cut(s) | 35 |
| MboI | GATC | 1 cut(s) | 33 |
| MboII | GAAGA | 2 cut(s) | 31, 190 |
| MlyI | GAGTC | 1 cut(s) | 139 |
| MnlI | CCTC | 2 cut(s) | 47, 121 |
| MslI | CAYNNNNRTG | 2 cut(s) | 74, 204 |
| MspR9I | CCNGG | 1 cut(s) | 44 |
| MvaI | CCWGG | 1 cut(s) | 44 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 57, 66 |
| NdeII | GATC | 1 cut(s) | 33 |
| NlaIII | CATG | 2 cut(s) | 163, 203 |
| PaeR7I | CTCGAG | 1 cut(s) | 135 |
| PfeI | GAWTC | 2 cut(s) | 122, 163 |
| PkrI | GCNGC | 2 cut(s) | 62, 198 |
| PleI | GAGTC | 1 cut(s) | 139 |
| PmaCI | CACGTG | 1 cut(s) | 99 |
| PmlI | CACGTG | 1 cut(s) | 99 |
| PpsI | GAGTC | 1 cut(s) | 139 |
| Ppu21I | YACGTR | 1 cut(s) | 99 |
| Psp6I | CCWGG | 1 cut(s) | 42 |
| PspCI | CACGTG | 1 cut(s) | 99 |
| PspGI | CCWGG | 1 cut(s) | 42 |
| PspXI | VCTCGAGB | 1 cut(s) | 135 |
| RsaI | GTAC | 1 cut(s) | 133 |
| RsaNI | GTAC | 1 cut(s) | 132 |
| RseI | CAYNNNNRTG | 2 cut(s) | 74, 204 |
| SatI | GCNGC | 2 cut(s) | 61, 197 |
| Sau3AI | GATC | 1 cut(s) | 33 |
| ScaI | AGTACT | 1 cut(s) | 133 |
| SchI | GAGTC | 1 cut(s) | 139 |
| ScrFI | CCNGG | 1 cut(s) | 44 |
| SetI | ASST | 2 cut(s) | 101, 198 |
| SfaNI | GCATC | 1 cut(s) | 78 |
| Sfr274I | CTCGAG | 1 cut(s) | 135 |
| SlaI | CTCGAG | 1 cut(s) | 135 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 74, 204 |
| SmlI | CTYRAG | 1 cut(s) | 135 |
| SmoI | CTYRAG | 1 cut(s) | 135 |
| SsiI | CCGC | 1 cut(s) | 61 |
| StyD4I | CCNGG | 1 cut(s) | 42 |
| TaiI | ACGT | 1 cut(s) | 101 |
| TaqI | TCGA | 2 cut(s) | 136, 148 |
| TatI | WGTACW | 1 cut(s) | 131 |
| TauI | GCSGC | 1 cut(s) | 63 |
| TfiI | GAWTC | 2 cut(s) | 122, 163 |
| TseI | GCWGC | 1 cut(s) | 196 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 41 |
| XhoI | CTCGAG | 1 cut(s) | 135 |
| ZrmI | AGTACT | 1 cut(s) | 133 |