Protein of unknown function (DUF2854)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0003270.1_g000031 |
| rosa_samantha | Rh2BG031700 Rh2BG574900 Rh5BG376300 Rh5BG450700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 154 |
| AccBSI | CCGCTC | 1 cut(s) | 132 |
| AciI | CCGC | 1 cut(s) | 132 |
| AclWI | GGATC | 1 cut(s) | 509 |
| AcsI | RAATTY | 1 cut(s) | 113 |
| AcuI | CTGAAG | 1 cut(s) | 83 |
| AfaI | GTAC | 3 cut(s) | 73, 422, 608 |
| AgsI | TTSAA | 5 cut(s) | 83, 463, 518, 545, 592 |
| Alw21I | GWGCWC | 2 cut(s) | 174, 384 |
| Alw26I | GTCTC | 1 cut(s) | 566 |
| AlwI | GGATC | 1 cut(s) | 509 |
| ApeKI | GCWGC | 1 cut(s) | 17 |
| ApoI | RAATTY | 1 cut(s) | 113 |
| AspS9I | GGNCC | 1 cut(s) | 186 |
| AsuHPI | GGTGA | 2 cut(s) | 239, 257 |
| AvaII | GGWCC | 1 cut(s) | 186 |
| BanI | GGYRCC | 1 cut(s) | 154 |
| Bbv12I | GWGCWC | 2 cut(s) | 174, 384 |
| BbvI | GCAGC | 1 cut(s) | 4 |
| BccI | CCATC | 2 cut(s) | 289, 634 |
| BclI | TGATCA | 1 cut(s) | 625 |
| BcoDI | GTCTC | 1 cut(s) | 566 |
| BfaI | CTAG | 1 cut(s) | 287 |
| BisI | GCNGC | 1 cut(s) | 18 |
| BlsI | GCNGC | 1 cut(s) | 19 |
| Bme18I | GGWCC | 1 cut(s) | 186 |
| BmgT120I | GGNCC | 1 cut(s) | 186 |
| BmiI | GGNNCC | 3 cut(s) | 156, 187, 188 |
| BmrI | ACTGGG | 2 cut(s) | 245, 507 |
| BmuI | ACTGGG | 2 cut(s) | 245, 507 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 383, 415 |
| BpuEI | CTTGAG | 1 cut(s) | 302 |
| Bse1I | ACTGG | 2 cut(s) | 251, 502 |
| Bse3DI | GCAATG | 1 cut(s) | 651 |
| BseGI | GGATG | 1 cut(s) | 328 |
| BseMI | GCAATG | 1 cut(s) | 651 |
| BseMII | CTCAG | 2 cut(s) | 372, 378 |
| BseNI | ACTGG | 2 cut(s) | 251, 502 |
| BseRI | GAGGAG | 4 cut(s) | 164, 305, 316, 404 |
| BseXI | GCAGC | 1 cut(s) | 4 |
| BsgI | GTGCAG | 1 cut(s) | 12 |
| BshNI | GGYRCC | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 2 cut(s) | 174, 384 |
| BslFI | GGGAC | 1 cut(s) | 199 |
| BsmAI | GTCTC | 1 cut(s) | 566 |
| BsmFI | GGGAC | 1 cut(s) | 199 |
| BsmI | GAATGC | 1 cut(s) | 598 |
| Bsp1286I | GDGCHC | 2 cut(s) | 174, 384 |
| Bsp1407I | TGTACA | 1 cut(s) | 420 |
| Bsp143I | GATC | 2 cut(s) | 501, 625 |
| BspACI | CCGC | 1 cut(s) | 132 |
| BspCNI | CTCAG | 2 cut(s) | 371, 379 |
| BspLI | GGNNCC | 3 cut(s) | 156, 187, 188 |
| BspPI | GGATC | 1 cut(s) | 509 |
| BspT107I | GGYRCC | 1 cut(s) | 154 |
| BsrBI | CCGCTC | 1 cut(s) | 132 |
| BsrDI | GCAATG | 1 cut(s) | 651 |
| BsrGI | TGTACA | 1 cut(s) | 420 |
| BsrI | ACTGG | 2 cut(s) | 251, 502 |
| BssMI | GATC | 2 cut(s) | 501, 625 |
| Bst4CI | ACNGT | 2 cut(s) | 221, 420 |
| Bst6I | CTCTTC | 1 cut(s) | 609 |
| BstAUI | TGTACA | 1 cut(s) | 420 |
| BstDEI | CTNAG | 2 cut(s) | 358, 387 |
| BstF5I | GGATG | 1 cut(s) | 328 |
| BstKTI | GATC | 2 cut(s) | 504, 628 |
| BstMAI | GTCTC | 1 cut(s) | 566 |
| BstMBI | GATC | 2 cut(s) | 501, 625 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 26, 152, 335 |
| BstV1I | GCAGC | 1 cut(s) | 4 |
| BtsCI | GGATG | 1 cut(s) | 328 |
| BtsIMutI | CAGTG | 2 cut(s) | 59, 226 |
| Cfr13I | GGNCC | 1 cut(s) | 186 |
| Csp6I | GTAC | 3 cut(s) | 72, 421, 607 |
| CviJI | RGCY | 3 cut(s) | 243, 398, 428 |
| CviKI_1 | RGCY | 3 cut(s) | 243, 398, 428 |
| CviQI | GTAC | 3 cut(s) | 72, 421, 607 |
| DdeI | CTNAG | 2 cut(s) | 358, 387 |
| DpnI | GATC | 2 cut(s) | 503, 627 |
| DpnII | GATC | 2 cut(s) | 501, 625 |
| Eam1104I | CTCTTC | 1 cut(s) | 609 |
| EarI | CTCTTC | 1 cut(s) | 609 |
| Eco47I | GGWCC | 1 cut(s) | 186 |
| Eco57I | CTGAAG | 1 cut(s) | 83 |
| EcoO109I | RGGNCCY | 1 cut(s) | 186 |
| EcoT22I | ATGCAT | 1 cut(s) | 556 |
| FaiI | YATR | 3 cut(s) | 77, 210, 284 |
| FaqI | GGGAC | 1 cut(s) | 199 |
| FbaI | TGATCA | 1 cut(s) | 625 |
| Fnu4HI | GCNGC | 1 cut(s) | 18 |
| FokI | GGATG | 1 cut(s) | 335 |
| Fsp4HI | GCNGC | 1 cut(s) | 18 |
| FspBI | CTAG | 1 cut(s) | 287 |
| GluI | GCNGC | 1 cut(s) | 18 |
| HinfI | GANTC | 5 cut(s) | 257, 307, 353, 365, 574 |
| HphI | GGTGA | 2 cut(s) | 239, 257 |
| Hpy166II | GTNNAC | 1 cut(s) | 137 |
| Hpy188I | TCNGA | 4 cut(s) | 35, 361, 370, 388 |
| Hpy8I | GTNNAC | 1 cut(s) | 137 |
| HpyAV | CCTTC | 3 cut(s) | 58, 77, 176 |
| HpyCH4III | ACNGT | 2 cut(s) | 221, 420 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 525, 554, 580 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 26, 152, 335 |
| HpyF3I | CTNAG | 2 cut(s) | 358, 387 |
| KflI | GGGWCCC | 1 cut(s) | 186 |
| Ksp22I | TGATCA | 1 cut(s) | 625 |
| Kzo9I | GATC | 2 cut(s) | 501, 625 |
| LmnI | GCTCC | 1 cut(s) | 207 |
| LpnPI | CCDG | 7 cut(s) | 90, 203, 264, 483, 535, 589, 650 |
| Lsp1109I | GCAGC | 1 cut(s) | 4 |
| MaeI | CTAG | 1 cut(s) | 287 |
| MalI | GATC | 2 cut(s) | 503, 627 |
| MbiI | CCGCTC | 1 cut(s) | 132 |
| MboI | GATC | 2 cut(s) | 501, 625 |
| MboII | GAAGA | 3 cut(s) | 302, 541, 626 |
| MhlI | GDGCHC | 2 cut(s) | 174, 384 |
| MluCI | AATT | 3 cut(s) | 113, 458, 540 |
| MlyI | GAGTC | 2 cut(s) | 362, 568 |
| Mph1103I | ATGCAT | 1 cut(s) | 556 |
| MseI | TTAA | 2 cut(s) | 216, 653 |
| Mva1269I | GAATGC | 1 cut(s) | 598 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 26, 152, 335 |
| NdeII | GATC | 2 cut(s) | 501, 625 |
| NlaIV | GGNNCC | 3 cut(s) | 156, 187, 188 |
| NsiI | ATGCAT | 1 cut(s) | 556 |
| PctI | GAATGC | 1 cut(s) | 598 |
| PfeI | GAWTC | 3 cut(s) | 257, 307, 365 |
| PkrI | GCNGC | 1 cut(s) | 19 |
| PleI | GAGTC | 2 cut(s) | 361, 568 |
| PpsI | GAGTC | 2 cut(s) | 361, 568 |
| PpuMI | RGGWCCY | 1 cut(s) | 186 |
| Psp5II | RGGWCCY | 1 cut(s) | 186 |
| PspN4I | GGNNCC | 3 cut(s) | 156, 187, 188 |
| PspPI | GGNCC | 1 cut(s) | 186 |
| PspPPI | RGGWCCY | 1 cut(s) | 186 |
| RsaI | GTAC | 3 cut(s) | 73, 422, 608 |
| RsaNI | GTAC | 3 cut(s) | 72, 421, 607 |
| SaqAI | TTAA | 2 cut(s) | 216, 653 |
| SatI | GCNGC | 1 cut(s) | 18 |
| Sau3AI | GATC | 2 cut(s) | 501, 625 |
| Sau96I | GGNCC | 1 cut(s) | 186 |
| SchI | GAGTC | 2 cut(s) | 362, 568 |
| SduI | GDGCHC | 2 cut(s) | 174, 384 |
| SetI | ASST | 5 cut(s) | 9, 15, 237, 396, 608 |
| SinI | GGWCC | 1 cut(s) | 186 |
| SmlI | CTYRAG | 2 cut(s) | 8, 317 |
| SmoI | CTYRAG | 2 cut(s) | 8, 317 |
| Sse9I | AATT | 3 cut(s) | 113, 458, 540 |
| SsiI | CCGC | 1 cut(s) | 132 |
| SspMI | CTAG | 1 cut(s) | 287 |
| TaaI | ACNGT | 2 cut(s) | 221, 420 |
| TaqI | TCGA | 3 cut(s) | 180, 255, 411 |
| TasI | AATT | 3 cut(s) | 113, 458, 540 |
| TatI | WGTACW | 1 cut(s) | 420 |
| TfiI | GAWTC | 3 cut(s) | 257, 307, 365 |
| Tru1I | TTAA | 2 cut(s) | 216, 653 |
| Tru9I | TTAA | 2 cut(s) | 216, 653 |
| TscAI | CASTG | 2 cut(s) | 66, 226 |
| TseI | GCWGC | 1 cut(s) | 17 |
| TspDTI | ATGAA | 2 cut(s) | 17, 378 |
| TspGWI | ACGGA | 1 cut(s) | 194 |
| TspRI | CASTG | 2 cut(s) | 66, 226 |
| VpaK11BI | GGWCC | 1 cut(s) | 186 |
| XapI | RAATTY | 1 cut(s) | 113 |
| XspI | CTAG | 1 cut(s) | 287 |
| Zsp2I | ATGCAT | 1 cut(s) | 556 |