UBX domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0005098.1_g000014 |
| rosa_rugosa | Rorug04G0430500 |
| rosa_samantha | Rh5CG065500 Rh5CG065600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 322 |
| AclWI | GGATC | 1 cut(s) | 111 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 138 |
| AgsI | TTSAA | 3 cut(s) | 19, 119, 263 |
| AjnI | CCWGG | 2 cut(s) | 289, 304 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 303 |
| AluBI | AGCT | 4 cut(s) | 124, 164, 241, 255 |
| AluI | AGCT | 4 cut(s) | 124, 164, 241, 255 |
| Alw21I | GWGCWC | 1 cut(s) | 257 |
| AlwI | GGATC | 1 cut(s) | 111 |
| ApeKI | GCWGC | 1 cut(s) | 279 |
| AsuHPI | GGTGA | 1 cut(s) | 320 |
| BanII | GRGCYC | 1 cut(s) | 257 |
| Bbv12I | GWGCWC | 1 cut(s) | 257 |
| BbvI | GCAGC | 1 cut(s) | 266 |
| BciT130I | CCWGG | 2 cut(s) | 291, 306 |
| BclI | TGATCA | 1 cut(s) | 46 |
| BisI | GCNGC | 1 cut(s) | 280 |
| BlsI | GCNGC | 1 cut(s) | 281 |
| Bme1390I | CCNGG | 2 cut(s) | 291, 306 |
| BmiI | GGNNCC | 1 cut(s) | 303 |
| BmrFI | CCNGG | 2 cut(s) | 291, 306 |
| BmsI | GCATC | 1 cut(s) | 118 |
| Bpu10I | CCTNAGC | 1 cut(s) | 251 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 138 |
| BseBI | CCWGG | 2 cut(s) | 291, 306 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 138 |
| BseMII | CTCAG | 1 cut(s) | 242 |
| BseXI | GCAGC | 1 cut(s) | 266 |
| BsiHKAI | GWGCWC | 1 cut(s) | 257 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 138 |
| Bsp1286I | GDGCHC | 1 cut(s) | 257 |
| Bsp143I | GATC | 4 cut(s) | 46, 103, 176, 202 |
| BspACI | CCGC | 1 cut(s) | 322 |
| BspCNI | CTCAG | 1 cut(s) | 243 |
| BspHI | TCATGA | 1 cut(s) | 97 |
| BspLI | GGNNCC | 1 cut(s) | 303 |
| BspPI | GGATC | 1 cut(s) | 111 |
| BssMI | GATC | 4 cut(s) | 46, 103, 176, 202 |
| Bst2UI | CCWGG | 2 cut(s) | 291, 306 |
| Bst4CI | ACNGT | 1 cut(s) | 85 |
| BstDEI | CTNAG | 1 cut(s) | 251 |
| BstKTI | GATC | 4 cut(s) | 49, 106, 179, 205 |
| BstMBI | GATC | 4 cut(s) | 46, 103, 176, 202 |
| BstNI | CCWGG | 2 cut(s) | 291, 306 |
| BstSCI | CCNGG | 2 cut(s) | 289, 304 |
| BstV1I | GCAGC | 1 cut(s) | 266 |
| BtsIMutI | CAGTG | 1 cut(s) | 198 |
| CciI | TCATGA | 1 cut(s) | 97 |
| CviAII | CATG | 1 cut(s) | 98 |
| CviJI | RGCY | 6 cut(s) | 124, 164, 241, 255, 279, 302 |
| CviKI_1 | RGCY | 6 cut(s) | 124, 164, 241, 255, 279, 302 |
| DdeI | CTNAG | 1 cut(s) | 251 |
| DpnI | GATC | 4 cut(s) | 48, 105, 178, 204 |
| DpnII | GATC | 4 cut(s) | 46, 103, 176, 202 |
| Ecl136II | GAGCTC | 1 cut(s) | 255 |
| Eco24I | GRGCYC | 1 cut(s) | 257 |
| Eco32I | GATATC | 1 cut(s) | 76 |
| Eco53kI | GAGCTC | 1 cut(s) | 255 |
| EcoICRI | GAGCTC | 1 cut(s) | 255 |
| EcoRII | CCWGG | 2 cut(s) | 289, 304 |
| EcoRV | GATATC | 1 cut(s) | 76 |
| EcoT38I | GRGCYC | 1 cut(s) | 257 |
| FaeI | CATG | 1 cut(s) | 101 |
| FaiI | YATR | 3 cut(s) | 99, 139, 223 |
| FatI | CATG | 1 cut(s) | 97 |
| FbaI | TGATCA | 1 cut(s) | 46 |
| Fnu4HI | GCNGC | 1 cut(s) | 280 |
| FriOI | GRGCYC | 1 cut(s) | 257 |
| Fsp4HI | GCNGC | 1 cut(s) | 280 |
| GluI | GCNGC | 1 cut(s) | 280 |
| Hin1II | CATG | 1 cut(s) | 101 |
| HphI | GGTGA | 1 cut(s) | 320 |
| Hpy166II | GTNNAC | 1 cut(s) | 311 |
| Hpy188I | TCNGA | 2 cut(s) | 148, 181 |
| Hpy188III | TCNNGA | 4 cut(s) | 50, 98, 174, 250 |
| Hpy8I | GTNNAC | 1 cut(s) | 311 |
| Hpy99I | CGWCG | 1 cut(s) | 137 |
| HpyCH4III | ACNGT | 1 cut(s) | 85 |
| HpyCH4IV | ACGT | 1 cut(s) | 135 |
| HpyCH4V | TGCA | 1 cut(s) | 317 |
| HpyF3I | CTNAG | 1 cut(s) | 251 |
| HpySE526I | ACGT | 1 cut(s) | 135 |
| Hsp92II | CATG | 1 cut(s) | 101 |
| Ksp22I | TGATCA | 1 cut(s) | 46 |
| Kzo9I | GATC | 4 cut(s) | 46, 103, 176, 202 |
| LmnI | GCTCC | 2 cut(s) | 260, 307 |
| LpnPI | CCDG | 6 cut(s) | 35, 263, 276, 291, 303, 318 |
| Lsp1109I | GCAGC | 1 cut(s) | 266 |
| LweI | GCATC | 1 cut(s) | 118 |
| MaeII | ACGT | 1 cut(s) | 135 |
| MalI | GATC | 4 cut(s) | 48, 105, 178, 204 |
| MboI | GATC | 4 cut(s) | 46, 103, 176, 202 |
| MhlI | GDGCHC | 1 cut(s) | 257 |
| MluCI | AATT | 1 cut(s) | 59 |
| MmeI | TCCRAC | 1 cut(s) | 89 |
| MnlI | CCTC | 3 cut(s) | 94, 240, 269 |
| MseI | TTAA | 2 cut(s) | 207, 237 |
| MspR9I | CCNGG | 2 cut(s) | 291, 306 |
| MvaI | CCWGG | 2 cut(s) | 291, 306 |
| NdeII | GATC | 4 cut(s) | 46, 103, 176, 202 |
| NlaIII | CATG | 1 cut(s) | 101 |
| NlaIV | GGNNCC | 1 cut(s) | 303 |
| PagI | TCATGA | 1 cut(s) | 97 |
| PfoI | TCCNGGA | 1 cut(s) | 289 |
| PkrI | GCNGC | 1 cut(s) | 281 |
| Psp124BI | GAGCTC | 1 cut(s) | 257 |
| Psp6I | CCWGG | 2 cut(s) | 289, 304 |
| PspGI | CCWGG | 2 cut(s) | 289, 304 |
| PspN4I | GGNNCC | 1 cut(s) | 303 |
| SacI | GAGCTC | 1 cut(s) | 257 |
| SaqAI | TTAA | 2 cut(s) | 207, 237 |
| SatI | GCNGC | 1 cut(s) | 280 |
| Sau3AI | GATC | 4 cut(s) | 46, 103, 176, 202 |
| ScrFI | CCNGG | 2 cut(s) | 291, 306 |
| SduI | GDGCHC | 1 cut(s) | 257 |
| SetI | ASST | 6 cut(s) | 126, 138, 166, 213, 243, 257 |
| SfaNI | GCATC | 1 cut(s) | 118 |
| Sse9I | AATT | 1 cut(s) | 59 |
| SsiI | CCGC | 1 cut(s) | 322 |
| SstI | GAGCTC | 1 cut(s) | 257 |
| StyD4I | CCNGG | 2 cut(s) | 289, 304 |
| TaaI | ACNGT | 1 cut(s) | 85 |
| TaiI | ACGT | 1 cut(s) | 138 |
| TaqI | TCGA | 1 cut(s) | 23 |
| TasI | AATT | 1 cut(s) | 59 |
| Tru1I | TTAA | 2 cut(s) | 207, 237 |
| Tru9I | TTAA | 2 cut(s) | 207, 237 |
| TscAI | CASTG | 1 cut(s) | 205 |
| TseI | GCWGC | 1 cut(s) | 279 |
| TspDTI | ATGAA | 1 cut(s) | 86 |
| TspGWI | ACGGA | 1 cut(s) | 222 |
| TspRI | CASTG | 1 cut(s) | 205 |