Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0006611

Physical Location & Seq

Genomic Coordinates Forward (+)

20994501 .. 20998958

Gene Structure 4458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG208300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGATAGGATTTTCACTTACATCTCCTGATTTGGTTATGTGTGCCGGGTCACCGGATATACCCCGAACCAGCTGTGCGGAGTCCCCTGAGTTCTTGGAGAGTCGATGCCATCAGAAGCTGGATACTTCGATGGAGCTCTCTTTCGAGAATGGAATCGATGCGTCTCAAGTTAAGGATACTAATAGGACCCCAACTGTGAAGTTCTCCACCACGTTGTGCGAAACCTATAAGGAGGATTTGTCTCCTGAAGCTTCATTTGAGCTTCTTCCGCCTACGGTGATTGAGGACAAGTCGAAGGAAGGTCCCCTTCTTGATGTAAACAACAATGTAGGTTCTGCAGATGGCTTCCTGGGCAGTGAATCACCTAAAGATGATGGCAATGCCATGTGTGAAGGAGACTATCAGAAGTTGCTAATCGGTTATAAGAACCAGGGAAAGGAATTAGCAGAGATGAGGAGTGCATTCGAGGAGCTCAAAAAGCAGAACCAATCCAAGAGTAATGAATGCCAAGAAGCTTGGAAGTCTTTAAAGGACCTCCAAAATGAACTCATGCGCAAGTCGATGCATGTTGGATCCTTGGGTATGATGGACCACATTAAGCTATCAGAGGAGGCATCGGCTTATAAGAACTGTCTTGCAGATATGAACGAGATGAGGTGTAGGCCTCTAAACACTGAGGAAGTTTCAGCAGGAGCTTCAATGGCTATTGACTTTGAATCTGAGAAAGATGGTGAGCTTGCTGTCAAGTCAAATGGGGTTACAAGAAGGACCTTTAAGTTTGATGCAGTATTCGGCCCTCAAGCAGACCAAGCTGATGTCTTCGAAGACACAGCTCCATTTGCAACCTCAGTTCTAGATGGGTACAATGTCTGCATATTTGCTTATGGACAGACTGGAAGTGGAAAAACCTTTACAATGGAGGGAACGGAAGAAGCTCGGGGAGTCAATTTTAGGACTCTTGAGCAACTGTTTCGCATAATAAAAGAGCGAGAAAAGTTGCATAGATATGATGTGTCTGTTAGTGTTTTAGAAGTGTACAACGAGCAAATAAGGGATCTACTTGTTCCAGGGAATCAATCAGGAGCAGCTGCCAAAAGCATACACTGTGTAATGGTGAAGGGGGAGAACTTGTTGAATGGGGAATGCACAAGAAGCAAGCTCTGGTTGGTGGATCTAGCAGGGAGTGAGCGTATAGCAAAGACAGAGGTGCAAGGAGAACGACTCAAGGAAACTCAAAATATCAATAGATCTCTATCTGCACTAGGTGATGTCATATCTGCACTTGCAACTAAAACCTCACACATACCCTTCAGGAACTCCAAGCTAACCCACTTGCTTCAAGACTCTCTAGGTGGAGACTCCAAGACGCTTATGTTTCTTCAAATTAGTCCTAATGAAAATGACTTGAGTGAGACCCTTTGCTCACTGAACTTTGCGAGTAGAGTTAGAGGGATAGAGTTGGGTCCTGCAAAGAGACAAATGGACACTTCTGAACTTTTAAGATACAAACAGATGTTTGAGAAAACAAAGCTAGACATCAAGAGCAAAGATGTACAGATAAGGAAGATGGAGGAAACAGTCCATGGGTTAGAACTGAAGATAAGAGAGAGAGACCTGAAAAATAAATGCCTGCAAGACAAGGTGAAAGAATTGGAATCACAACTTTTAATTGAGAGAAAGCTAGCACGTCAGCATGTGGACACAAAAATAGCCGAGCAGCACCTGCAGCAACTGAAACATCAACAAGACGAGCAAACTACTGCACTTGCAAGACCACCTCTAACAAACCGACCATTAACAACTCACAAGATTCTCAATGAGACAGCCATTAATACATTGGAGAAGGACCAAGTAAACCCCACGCAACAACTAACTGAGAAGGCCAACAACAAAATTCCAGTACCTACAATGGATGGTTTTGTCAAGTATATTGATCCTATAGAGAAAGAAAACAACCCCGACATGGCTGAACAATTTGTTCTACCAAAGAGAACTGGAAGAGCCTCTATCTGCCCGACAGTTCAGCGGATTCCTGCTACATCTGCTCCAAGACGCAACTCTCTAATTCCACTCCCTACTGTACCAAACCGCCTCCAATCCCCAATGCCTGTATTATCATTAGCACCAATATCAGCATACCATGCTGATAAGAAAGCTGAAATGGATTATGTGTCTGAAATTGACTGCTTGCCTGAACAGACACCATGTAGTAGTCCTAAAGTTACCAGAACTGGTGGCAAGAAATTCAACAGCATACTGAGACGAAGCATCCAAAAGAAAGCTCAGATGAAGTCCCCAATGCCTCCACACATGAGAAAAGGTGTGAATGTAGGGATGGAGAAGGTTAGAGTATCTATTGGAAGTCGAGGCAGGATGCCACACAGGGTTTTACTTGGAAATGGTAGAAGGGCAGGTACTAAAGAAGGTCAGAAGCAGATTAGGGAAAAGGAGAGGGGGTGGAACATTGGTACAGCAGGGAGAAATGCTATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin Malectin

Protein Analysis

830

Amino Acids

92.75

Weight (kDa)

8.16

Isoelectric Point (pI)

44.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	219 - 359	1.2e-44	Kinesin motor domain
Microtub_bd	PF16796	221 - 354	7e-33	Microtubule binding
Kinesin	PF00225	366 - 485	2.1e-45	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006611)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72250 AT1G72250 AT1G72250 AT1G72250
fragaria_vesca	FvH4_3g16110 FvH4_3g16110 FvH4_3g16110
malus_domestica	MD05G1213600.v1.1 MD10G1197400.v1.1
prunus_persica	Prupe.4G144400_v2.0.a1 Prupe.4G144400_v2.0.a1
pyrus_communis	pycom05g19730 pycom10g17030
rosa_chinensis	RchiOBHm_Chr5g0027091
rosa_laevigata	RLG00000032989 RLG00000032991
rosa_multiflora	Rmu_sc0000882.1_g000027 Rmu_sc0006065.1_g000024
rosa_roxburghii	Rroxscaffold_1G00052400
rosa_rugosa	Rorug05G0097200 Rorug05G0097200
rosa_samantha	Rh5AG190900 Rh5BG188500 Rh5CG208300 Rh5DG190300
rosa_wichuraiana	Rw5G017390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	423, 624
AarI	CACCTGC	1 cut(s)	1731
Acc16I	TGCGCA	1 cut(s)	554
Acc36I	ACCTGC	2 cut(s)	1731, 2402
AciI	CCGC	4 cut(s)	77, 269, 2026, 2089
AclWI	GGATC	5 cut(s)	567, 580, 1062, 1179, 1928
AcsI	RAATTY	2 cut(s)	1893, 2243
AcuI	CTGAAG	3 cut(s)	267, 1294, 1616
AdeI	CACNNNGTG	2 cut(s)	216, 1265
AfaI	GTAC	7 cut(s)	863, 1037, 1554, 1902, 2082, 2416, 2470
AfiI	CCNNNNNNNGG	2 cut(s)	436, 1963
AgsI	TTSAA	6 cut(s)	699, 716, 1135, 1340, 1382, 2248
AjiI	CACGTC	1 cut(s)	1688
AjnI	CCWGG	3 cut(s)	348, 429, 1066
Alw21I	GWGCWC	2 cut(s)	138, 474
Alw26I	GTCTC	9 cut(s)	168, 246, 390, 1350, 1406, 1468, 1605, 1814, 2254
AlwI	GGATC	5 cut(s)	567, 580, 1062, 1179, 1928
AlwNI	CAGNNNCTG	3 cut(s)	118, 1723, 1732
Ama87I	CYCGRG	1 cut(s)	936
AoxI	GGCC	3 cut(s)	662, 793, 1881
ApeKI	GCWGC	4 cut(s)	1085, 1088, 1717, 1726
ApoI	RAATTY	2 cut(s)	1893, 2243
AseI	ATTAAT	1 cut(s)	1830
AspLEI	GCGC	1 cut(s)	555
AspS9I	GGNCC	8 cut(s)	186, 302, 532, 589, 768, 794, 1463, 1846
AsuC2I	CCSGG	1 cut(s)	46
AsuHPI	GGTGA	7 cut(s)	42, 289, 354, 743, 1126, 1277, 1654
AsuII	TTCGAA	1 cut(s)	822
AsuNHI	GCTAGC	1 cut(s)	1681
AvaI	CYCGRG	1 cut(s)	936
AvaII	GGWCC	7 cut(s)	186, 302, 532, 589, 768, 1463, 1846
BamHI	GGATCC	1 cut(s)	572
BanII	GRGCYC	2 cut(s)	138, 474
BarI	GAAGNNNNNNTAC	2 cut(s)	2398, 2430
BbsI	GAAGAC	2 cut(s)	811, 831
Bbv12I	GWGCWC	2 cut(s)	138, 474
BbvI	GCAGC	4 cut(s)	1075, 1097, 1729, 1738
BcgI	CGANNNNNNTGC	2 cut(s)	953, 987
BciT130I	CCWGG	3 cut(s)	350, 431, 1068
BciVI	GTATCC	2 cut(s)	115, 169
BcnI	CCSGG	1 cut(s)	46
BcoDI	GTCTC	9 cut(s)	168, 246, 390, 1350, 1406, 1468, 1605, 1814, 2254
BfaI	CTAG	6 cut(s)	854, 1175, 1262, 1349, 1532, 1682
BfmI	CTRYAG	3 cut(s)	336, 1724, 1938
BfuAI	ACCTGC	2 cut(s)	1731, 2402
BfuI	GTATCC	2 cut(s)	115, 169
BglII	AGATCT	1 cut(s)	1247
BisI	GCNGC	4 cut(s)	1086, 1089, 1718, 1727
BlsI	GCNGC	4 cut(s)	1087, 1090, 1719, 1728
Bme1390I	CCNGG	4 cut(s)	46, 350, 431, 1068
Bme18I	GGWCC	7 cut(s)	186, 302, 532, 589, 768, 1463, 1846
BmeT110I	CYCGRG	1 cut(s)	936
BmgBI	CACGTC	1 cut(s)	1688
BmgT120I	GGNCC	8 cut(s)	186, 302, 532, 589, 768, 794, 1463, 1846
BmiI	GGNNCC	4 cut(s)	188, 304, 574, 1464
BmrFI	CCNGG	4 cut(s)	46, 350, 431, 1068
BmsI	GCATC	7 cut(s)	95, 148, 552, 623, 772, 2277, 2364
BmtI	GCTAGC	1 cut(s)	1685
BpiI	GAAGAC	2 cut(s)	811, 831
BplI	GAGNNNNNCTC	2 cut(s)	1206, 1238
Bpu14I	TTCGAA	1 cut(s)	822
BpuEI	CTTGAG	5 cut(s)	150, 783, 980, 1208, 1426
BpuMI	CCSGG	1 cut(s)	46
Bsa29I	ATCGAT	1 cut(s)	156
BsaBI	GATNNNNATC	1 cut(s)	1252
BsaI	GGTCTC	2 cut(s)	1406, 1605
BsaJI	CCNNGG	5 cut(s)	349, 430, 576, 1067, 1582
BsaWI	WCCGGW	1 cut(s)	52
Bsc4I	CCNNNNNNNGG	2 cut(s)	436, 1963
Bse1I	ACTGG	4 cut(s)	898, 1898, 1999, 2236
Bse3DI	GCAATG	1 cut(s)	385
Bse8I	GATNNNNATC	1 cut(s)	1252
BseBI	CCWGG	3 cut(s)	350, 431, 1068
BseCI	ATCGAT	1 cut(s)	156
BseDI	CCNNGG	5 cut(s)	349, 430, 576, 1067, 1582
BseGI	GGATG	4 cut(s)	1918, 2268, 2340, 2379
BseJI	GATNNNNATC	1 cut(s)	1252
BseLI	CCNNNNNNNGG	2 cut(s)	436, 1963
BseMI	GCAATG	1 cut(s)	385
BseMII	CTCAG	7 cut(s)	78, 666, 711, 861, 1866, 2249, 2297
BseNI	ACTGG	4 cut(s)	898, 1898, 1999, 2236
BseRI	GAGGAG	3 cut(s)	469, 482, 623
BseXI	GCAGC	4 cut(s)	1075, 1097, 1729, 1738
BsgI	GTGCAG	3 cut(s)	1242, 1263, 1746
BshFI	GGCC	3 cut(s)	664, 795, 1883
BshVI	ATCGAT	1 cut(s)	156
BsiHKAI	GWGCWC	2 cut(s)	138, 474
BsiHKCI	CYCGRG	1 cut(s)	936
BsiSI	CCGG	2 cut(s)	45, 53
BslFI	GGGAC	3 cut(s)	67, 288, 2278
BslI	CCNNNNNNNGG	2 cut(s)	436, 1963
BsmAI	GTCTC	9 cut(s)	168, 246, 390, 1350, 1406, 1468, 1605, 1814, 2254
BsmBI	CGTCTC	2 cut(s)	168, 2254
BsmFI	GGGAC	3 cut(s)	67, 288, 2278
BsmI	GAATGC	3 cut(s)	461, 509, 1148
BsnI	GGCC	3 cut(s)	664, 795, 1883
Bso31I	GGTCTC	2 cut(s)	1406, 1605
BsoBI	CYCGRG	1 cut(s)	936
Bsp119I	TTCGAA	1 cut(s)	822
Bsp1286I	GDGCHC	2 cut(s)	138, 474
Bsp1407I	TGTACA	2 cut(s)	1035, 1552
Bsp143I	GATC	5 cut(s)	572, 1054, 1171, 1247, 1933
Bsp19I	CCATGG	1 cut(s)	1582
BspACI	CCGC	4 cut(s)	77, 269, 2026, 2089
BspANI	GGCC	3 cut(s)	664, 795, 1883
BspCNI	CTCAG	7 cut(s)	79, 667, 712, 860, 1867, 2250, 2296
BspDI	ATCGAT	1 cut(s)	156
BspLI	GGNNCC	4 cut(s)	188, 304, 574, 1464
BspMAI	CTGCAG	2 cut(s)	340, 1728
BspMI	ACCTGC	2 cut(s)	1731, 2402
BspOI	GCTAGC	1 cut(s)	1685
BspPI	GGATC	5 cut(s)	567, 580, 1062, 1179, 1928
BspQI	GCTCTTC	1 cut(s)	1993
BspT104I	TTCGAA	1 cut(s)	822
BspTNI	GGTCTC	2 cut(s)	1406, 1605
BsrDI	GCAATG	1 cut(s)	385
BsrGI	TGTACA	2 cut(s)	1035, 1552
BsrI	ACTGG	4 cut(s)	898, 1898, 1999, 2236
BssECI	CCNNGG	5 cut(s)	349, 430, 576, 1067, 1582
BssMI	GATC	5 cut(s)	572, 1054, 1171, 1247, 1933
BssT1I	CCWWGG	2 cut(s)	576, 1582
Bst2UI	CCWGG	3 cut(s)	350, 431, 1068
Bst4CI	ACNGT	8 cut(s)	196, 277, 632, 969, 1106, 1579, 2020, 2080
Bst6I	CTCTTC	1 cut(s)	1993
BstAPI	GCANNNNNTGC	2 cut(s)	1723, 2141
BstAUI	TGTACA	2 cut(s)	1035, 1552
BstBI	TTCGAA	1 cut(s)	822
BstC8I	GCNNGC	5 cut(s)	738, 1157, 1631, 1683, 2189
BstDEI	CTNAG	7 cut(s)	87, 675, 720, 847, 1875, 2258, 2283
BstDSI	CCRYGG	1 cut(s)	1582
BstEII	GGTNACC	1 cut(s)	48
BstF5I	GGATG	4 cut(s)	1918, 2268, 2340, 2379
BstHHI	GCGC	1 cut(s)	555
BstKTI	GATC	5 cut(s)	575, 1057, 1174, 1250, 1936
BstMAI	GTCTC	9 cut(s)	168, 246, 390, 1350, 1406, 1468, 1605, 1814, 2254
BstMBI	GATC	5 cut(s)	572, 1054, 1171, 1247, 1933
BstNI	CCWGG	3 cut(s)	350, 431, 1068
BstNSI	RCATGY	2 cut(s)	569, 1697
BstPI	GGTNACC	1 cut(s)	48
BstSCI	CCNGG	4 cut(s)	44, 348, 429, 1066
BstSFI	CTRYAG	3 cut(s)	336, 1724, 1938
BstV1I	GCAGC	4 cut(s)	1075, 1097, 1729, 1738
BstV2I	GAAGAC	2 cut(s)	811, 831
BstX2I	RGATCY	4 cut(s)	572, 1054, 1171, 1247
BstYI	RGATCY	4 cut(s)	572, 1054, 1171, 1247
Bsu15I	ATCGAT	1 cut(s)	156
BsuI	GTATCC	2 cut(s)	115, 169
BsuRI	GGCC	3 cut(s)	664, 795, 1883
BsuTUI	ATCGAT	1 cut(s)	156
BtgI	CCRYGG	1 cut(s)	1582
BtrI	CACGTC	1 cut(s)	1688
BtsCI	GGATG	4 cut(s)	1918, 2268, 2340, 2379
BtsI	GCAGTG	1 cut(s)	361
BtsIMutI	CAGTG	4 cut(s)	361, 672, 1102, 1424
BveI	ACCTGC	2 cut(s)	1731, 2402
Cac8I	GCNNGC	5 cut(s)	738, 1157, 1631, 1683, 2189
CaiI	CAGNNNCTG	3 cut(s)	118, 1723, 1732
CfoI	GCGC	1 cut(s)	555
Cfr13I	GGNCC	8 cut(s)	186, 302, 532, 589, 768, 794, 1463, 1846
ClaI	ATCGAT	1 cut(s)	156
CseI	GACGC	3 cut(s)	150, 1375, 2061
Csp6I	GTAC	7 cut(s)	862, 1036, 1553, 1901, 2081, 2415, 2469
CviAII	CATG	9 cut(s)	385, 550, 566, 1583, 1694, 1963, 2141, 2205, 2311
CviQI	GTAC	7 cut(s)	862, 1036, 1553, 1901, 2081, 2415, 2469
DdeI	CTNAG	7 cut(s)	87, 675, 720, 847, 1875, 2258, 2283
DpnI	GATC	5 cut(s)	574, 1056, 1173, 1249, 1935
DpnII	GATC	5 cut(s)	572, 1054, 1171, 1247, 1933
DraI	TTTAAA	1 cut(s)	528
DraIII	CACNNNGTG	2 cut(s)	216, 1265
Eam1104I	CTCTTC	1 cut(s)	1993
EarI	CTCTTC	1 cut(s)	1993
EciI	GGCGGA	1 cut(s)	258
Ecl136II	GAGCTC	2 cut(s)	136, 472
Eco130I	CCWWGG	2 cut(s)	576, 1582
Eco147I	AGGCCT	1 cut(s)	664
Eco24I	GRGCYC	2 cut(s)	138, 474
Eco31I	GGTCTC	2 cut(s)	1406, 1605
Eco47I	GGWCC	7 cut(s)	186, 302, 532, 589, 768, 1463, 1846
Eco53kI	GAGCTC	2 cut(s)	136, 472
Eco57I	CTGAAG	3 cut(s)	267, 1294, 1616
Eco88I	CYCGRG	1 cut(s)	936
Eco91I	GGTNACC	1 cut(s)	48
EcoICRI	GAGCTC	2 cut(s)	136, 472
EcoO109I	RGGNCCY	5 cut(s)	186, 302, 532, 768, 1463
EcoO65I	GGTNACC	1 cut(s)	48
EcoRII	CCWGG	3 cut(s)	348, 429, 1066
EcoT14I	CCWWGG	2 cut(s)	576, 1582
EcoT22I	ATGCAT	1 cut(s)	567
EcoT38I	GRGCYC	2 cut(s)	138, 474
ErhI	CCWWGG	2 cut(s)	576, 1582
Esp3I	CGTCTC	2 cut(s)	168, 2254
FaeI	CATG	9 cut(s)	388, 553, 569, 1586, 1697, 1966, 2144, 2208, 2314
FalI	AAGNNNNNCTT	2 cut(s)	291, 323
FaqI	GGGAC	3 cut(s)	67, 288, 2278
FatI	CATG	9 cut(s)	384, 549, 565, 1582, 1693, 1962, 2140, 2204, 2310
Fnu4HI	GCNGC	4 cut(s)	1086, 1089, 1718, 1727
FokI	GGATG	4 cut(s)	1925, 2255, 2347, 2386
FriOI	GRGCYC	2 cut(s)	138, 474
Fsp4HI	GCNGC	4 cut(s)	1086, 1089, 1718, 1727
FspBI	CTAG	6 cut(s)	854, 1175, 1262, 1349, 1532, 1682
FspI	TGCGCA	1 cut(s)	554
GlaI	GCGC	1 cut(s)	554
GluI	GCNGC	4 cut(s)	1086, 1089, 1718, 1727
HaeIII	GGCC	3 cut(s)	664, 795, 1883
HapII	CCGG	2 cut(s)	45, 53
HgaI	GACGC	3 cut(s)	150, 1375, 2061
HhaI	GCGC	1 cut(s)	555
Hin1II	CATG	9 cut(s)	388, 553, 569, 1586, 1697, 1966, 2144, 2208, 2314
Hin6I	GCGC	1 cut(s)	553
HinP1I	GCGC	1 cut(s)	553
HindIII	AAGCTT	2 cut(s)	249, 513
HpaII	CCGG	2 cut(s)	45, 53
HphI	GGTGA	7 cut(s)	42, 289, 354, 743, 1126, 1277, 1654
Hpy166II	GTNNAC	4 cut(s)	319, 1036, 1699, 1855
Hpy188I	TCNGA	8 cut(s)	114, 405, 607, 721, 1492, 2176, 2286, 2430
Hpy8I	GTNNAC	4 cut(s)	319, 1036, 1699, 1855
HpyCH4III	ACNGT	8 cut(s)	196, 277, 632, 969, 1106, 1579, 2020, 2080
HpyCH4IV	ACGT	2 cut(s)	212, 1687
HpyF3I	CTNAG	7 cut(s)	87, 675, 720, 847, 1875, 2258, 2283
HpySE526I	ACGT	2 cut(s)	212, 1687
Hsp92II	CATG	9 cut(s)	388, 553, 569, 1586, 1697, 1966, 2144, 2208, 2314
HspAI	GCGC	1 cut(s)	553
Kzo9I	GATC	5 cut(s)	572, 1054, 1171, 1247, 1933
LguI	GCTCTTC	1 cut(s)	1993
LmnI	GCTCC	6 cut(s)	133, 469, 692, 838, 1082, 2050
Lsp1109I	GCAGC	4 cut(s)	1075, 1097, 1729, 1738
LweI	GCATC	7 cut(s)	95, 148, 552, 623, 772, 2277, 2364
MaeI	CTAG	6 cut(s)	854, 1175, 1262, 1349, 1532, 1682
MaeII	ACGT	2 cut(s)	212, 1687
MaeIII	GTNAC	3 cut(s)	48, 757, 2221
MalI	GATC	5 cut(s)	574, 1056, 1173, 1249, 1935
MboI	GATC	5 cut(s)	572, 1054, 1171, 1247, 1933
MboII	GAAGA	8 cut(s)	257, 811, 836, 941, 1370, 1576, 1609, 2010
MflI	RGATCY	4 cut(s)	572, 1054, 1171, 1247
MhlI	GDGCHC	2 cut(s)	138, 474
MlyI	GAGTC	7 cut(s)	89, 109, 949, 951, 1215, 1337, 1352
MmeI	TCCRAC	1 cut(s)	550
Mph1103I	ATGCAT	1 cut(s)	567
MseI	TTAA	9 cut(s)	171, 527, 597, 774, 1499, 1667, 1796, 1830, 2491
MslI	CAYNNNNRTG	1 cut(s)	1005
MspA1I	CMGCKG	3 cut(s)	72, 1088, 2026
MspI	CCGG	2 cut(s)	45, 53
MspR9I	CCNGG	4 cut(s)	46, 350, 431, 1068
Mva1269I	GAATGC	3 cut(s)	461, 509, 1148
MvaI	CCWGG	3 cut(s)	350, 431, 1068
NciI	CCSGG	1 cut(s)	46
NcoI	CCATGG	1 cut(s)	1582
NdeII	GATC	5 cut(s)	572, 1054, 1171, 1247, 1933
NheI	GCTAGC	1 cut(s)	1681
NlaIII	CATG	9 cut(s)	388, 553, 569, 1586, 1697, 1966, 2144, 2208, 2314
NlaIV	GGNNCC	4 cut(s)	188, 304, 574, 1464
NmeAIII	GCCGAG	1 cut(s)	1738
NmuCI	GTSAC	1 cut(s)	48
NsbI	TGCGCA	1 cut(s)	554
NsiI	ATGCAT	1 cut(s)	567
NspI	RCATGY	2 cut(s)	569, 1697
NspV	TTCGAA	1 cut(s)	822
PaqCI	CACCTGC	1 cut(s)	1731
PceI	AGGCCT	1 cut(s)	664
PciSI	GCTCTTC	1 cut(s)	1993
PctI	GAATGC	3 cut(s)	461, 509, 1148
PfeI	GAWTC	7 cut(s)	153, 359, 716, 1072, 1655, 1810, 2029
PkrI	GCNGC	4 cut(s)	1087, 1090, 1719, 1728
PleI	GAGTC	7 cut(s)	88, 108, 949, 950, 1215, 1337, 1352
PpsI	GAGTC	7 cut(s)	88, 108, 949, 950, 1215, 1337, 1352
PpuMI	RGGWCCY	5 cut(s)	186, 302, 532, 768, 1463
PshBI	ATTAAT	1 cut(s)	1830
PsiI	TTATAA	2 cut(s)	423, 624
Psp124BI	GAGCTC	2 cut(s)	138, 474
Psp5II	RGGWCCY	5 cut(s)	186, 302, 532, 768, 1463
Psp6I	CCWGG	3 cut(s)	348, 429, 1066
PspEI	GGTNACC	1 cut(s)	48
PspGI	CCWGG	3 cut(s)	348, 429, 1066
PspN4I	GGNNCC	4 cut(s)	188, 304, 574, 1464
PspPI	GGNCC	8 cut(s)	186, 302, 532, 589, 768, 794, 1463, 1846
PspPPI	RGGWCCY	5 cut(s)	186, 302, 532, 768, 1463
PstI	CTGCAG	2 cut(s)	340, 1728
PstNI	CAGNNNCTG	3 cut(s)	118, 1723, 1732
PsuI	RGATCY	4 cut(s)	572, 1054, 1171, 1247
PvuII	CAGCTG	2 cut(s)	72, 1088
RsaI	GTAC	7 cut(s)	863, 1037, 1554, 1902, 2082, 2416, 2470
RsaNI	GTAC	7 cut(s)	862, 1036, 1553, 1901, 2081, 2415, 2469
RseI	CAYNNNNRTG	1 cut(s)	1005
SacI	GAGCTC	2 cut(s)	138, 474
SapI	GCTCTTC	1 cut(s)	1993
SaqAI	TTAA	9 cut(s)	171, 527, 597, 774, 1499, 1667, 1796, 1830, 2491
SatI	GCNGC	4 cut(s)	1086, 1089, 1718, 1727
Sau3AI	GATC	5 cut(s)	572, 1054, 1171, 1247, 1933
Sau96I	GGNCC	8 cut(s)	186, 302, 532, 589, 768, 794, 1463, 1846
SchI	GAGTC	7 cut(s)	89, 109, 949, 951, 1215, 1337, 1352
ScrFI	CCNGG	4 cut(s)	46, 350, 431, 1068
SduI	GDGCHC	2 cut(s)	138, 474
SfaNI	GCATC	7 cut(s)	95, 148, 552, 623, 772, 2277, 2364
SfcI	CTRYAG	3 cut(s)	336, 1724, 1938
SfuI	TTCGAA	1 cut(s)	822
SinI	GGWCC	7 cut(s)	186, 302, 532, 589, 768, 1463, 1846
SmiMI	CAYNNNNRTG	1 cut(s)	1005
SmlI	CTYRAG	5 cut(s)	165, 798, 959, 1223, 1405
SmoI	CTYRAG	5 cut(s)	165, 798, 959, 1223, 1405
SseBI	AGGCCT	1 cut(s)	664
SsiI	CCGC	4 cut(s)	77, 269, 2026, 2089
SspMI	CTAG	6 cut(s)	854, 1175, 1262, 1349, 1532, 1682
SstI	GAGCTC	2 cut(s)	138, 474
StuI	AGGCCT	1 cut(s)	664
StyD4I	CCNGG	4 cut(s)	44, 348, 429, 1066
StyI	CCWWGG	2 cut(s)	576, 1582
TaaI	ACNGT	8 cut(s)	196, 277, 632, 969, 1106, 1579, 2020, 2080
TaiI	ACGT	2 cut(s)	215, 1690
TaqI	TCGA	9 cut(s)	103, 128, 144, 156, 293, 465, 560, 822, 2365
TatI	WGTACW	2 cut(s)	1035, 1552
TfiI	GAWTC	7 cut(s)	153, 359, 716, 1072, 1655, 1810, 2029
Tru1I	TTAA	9 cut(s)	171, 527, 597, 774, 1499, 1667, 1796, 1830, 2491
Tru9I	TTAA	9 cut(s)	171, 527, 597, 774, 1499, 1667, 1796, 1830, 2491
TscAI	CASTG	4 cut(s)	361, 679, 1109, 1431
TseFI	GTSAC	1 cut(s)	48
TseI	GCWGC	4 cut(s)	1085, 1088, 1717, 1726
Tsp45I	GTSAC	1 cut(s)	48
TspDTI	ATGAA	6 cut(s)	243, 516, 558, 659, 1410, 2303
TspGWI	ACGGA	1 cut(s)	941
TspRI	CASTG	4 cut(s)	361, 679, 1109, 1431
VpaK11BI	GGWCC	7 cut(s)	186, 302, 532, 589, 768, 1463, 1846
VspI	ATTAAT	1 cut(s)	1830
XapI	RAATTY	2 cut(s)	1893, 2243
XbaI	TCTAGA	1 cut(s)	853
XceI	RCATGY	2 cut(s)	569, 1697
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1834
XspI	CTAG	6 cut(s)	854, 1175, 1262, 1349, 1532, 1682
Zsp2I	ATGCAT	1 cut(s)	567

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.