(E,E)-alpha-farnesene
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1310900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr5g0029191 |
| rosa_roxburghii | Rroxscaffold_1G00070910 |
| rosa_samantha | Rh5CG224900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 368 |
| AclWI | GGATC | 1 cut(s) | 340 |
| AcoI | YGGCCR | 1 cut(s) | 87 |
| AcsI | RAATTY | 2 cut(s) | 8, 240 |
| AcuI | CTGAAG | 1 cut(s) | 135 |
| AfaI | GTAC | 1 cut(s) | 38 |
| AgsI | TTSAA | 1 cut(s) | 365 |
| AhlI | ACTAGT | 1 cut(s) | 358 |
| AluBI | AGCT | 2 cut(s) | 164, 275 |
| AluI | AGCT | 2 cut(s) | 164, 275 |
| AlwI | GGATC | 1 cut(s) | 340 |
| Ama87I | CYCGRG | 2 cut(s) | 276, 336 |
| AoxI | GGCC | 1 cut(s) | 87 |
| ApoI | RAATTY | 2 cut(s) | 8, 240 |
| AsuHPI | GGTGA | 1 cut(s) | 329 |
| AvaI | CYCGRG | 2 cut(s) | 276, 336 |
| BauI | CACGAG | 1 cut(s) | 32 |
| BccI | CCATC | 2 cut(s) | 296, 302 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 317, 351 |
| BclI | TGATCA | 1 cut(s) | 319 |
| BcuI | ACTAGT | 1 cut(s) | 358 |
| BfaI | CTAG | 1 cut(s) | 359 |
| BglII | AGATCT | 1 cut(s) | 28 |
| BmeT110I | CYCGRG | 2 cut(s) | 276, 336 |
| BpuEI | CTTGAG | 1 cut(s) | 213 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BshFI | GGCC | 1 cut(s) | 89 |
| BsiHKCI | CYCGRG | 2 cut(s) | 276, 336 |
| BslFI | GGGAC | 1 cut(s) | 346 |
| BsmFI | GGGAC | 1 cut(s) | 346 |
| BsmI | GAATGC | 1 cut(s) | 151 |
| BsnI | GGCC | 1 cut(s) | 89 |
| BsoBI | CYCGRG | 2 cut(s) | 276, 336 |
| Bsp1407I | TGTACA | 1 cut(s) | 36 |
| Bsp143I | GATC | 4 cut(s) | 28, 70, 319, 345 |
| BspACI | CCGC | 1 cut(s) | 368 |
| BspANI | GGCC | 1 cut(s) | 89 |
| BspPI | GGATC | 1 cut(s) | 340 |
| BsrGI | TGTACA | 1 cut(s) | 36 |
| BssMI | GATC | 4 cut(s) | 28, 70, 319, 345 |
| BssSI | CACGAG | 1 cut(s) | 32 |
| Bst2BI | CACGAG | 1 cut(s) | 32 |
| BstAUI | TGTACA | 1 cut(s) | 36 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstKTI | GATC | 4 cut(s) | 31, 73, 322, 348 |
| BstMBI | GATC | 4 cut(s) | 28, 70, 319, 345 |
| BstX2I | RGATCY | 2 cut(s) | 28, 345 |
| BstYI | RGATCY | 2 cut(s) | 28, 345 |
| BsuRI | GGCC | 1 cut(s) | 89 |
| BtgZI | GCGATG | 1 cut(s) | 120 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| Csp6I | GTAC | 1 cut(s) | 37 |
| CviAII | CATG | 3 cut(s) | 133, 184, 198 |
| CviJI | RGCY | 3 cut(s) | 89, 164, 275 |
| CviKI_1 | RGCY | 3 cut(s) | 89, 164, 275 |
| CviQI | GTAC | 1 cut(s) | 37 |
| DpnI | GATC | 4 cut(s) | 30, 72, 321, 347 |
| DpnII | GATC | 4 cut(s) | 28, 70, 319, 345 |
| EaeI | YGGCCR | 1 cut(s) | 87 |
| Eco57I | CTGAAG | 1 cut(s) | 135 |
| Eco88I | CYCGRG | 2 cut(s) | 276, 336 |
| EcoT22I | ATGCAT | 2 cut(s) | 185, 199 |
| FaeI | CATG | 3 cut(s) | 136, 187, 201 |
| FaiI | YATR | 5 cut(s) | 127, 134, 185, 199, 272 |
| FaqI | GGGAC | 1 cut(s) | 346 |
| FatI | CATG | 3 cut(s) | 132, 183, 197 |
| FbaI | TGATCA | 1 cut(s) | 319 |
| FokI | GGATG | 1 cut(s) | 17 |
| FspBI | CTAG | 1 cut(s) | 359 |
| HaeIII | GGCC | 1 cut(s) | 89 |
| Hin1II | CATG | 3 cut(s) | 136, 187, 201 |
| HinfI | GANTC | 2 cut(s) | 60, 334 |
| HphI | GGTGA | 1 cut(s) | 329 |
| Hpy166II | GTNNAC | 1 cut(s) | 37 |
| Hpy188I | TCNGA | 1 cut(s) | 154 |
| Hpy188III | TCNNGA | 3 cut(s) | 236, 299, 323 |
| Hpy8I | GTNNAC | 1 cut(s) | 37 |
| HpyCH4V | TGCA | 3 cut(s) | 16, 183, 197 |
| Hsp92II | CATG | 3 cut(s) | 136, 187, 201 |
| Ksp22I | TGATCA | 1 cut(s) | 319 |
| Kzo9I | GATC | 4 cut(s) | 28, 70, 319, 345 |
| LpnPI | CCDG | 2 cut(s) | 59, 249 |
| MaeI | CTAG | 1 cut(s) | 359 |
| MaeIII | GTNAC | 1 cut(s) | 284 |
| MalI | GATC | 4 cut(s) | 30, 72, 321, 347 |
| MboI | GATC | 4 cut(s) | 28, 70, 319, 345 |
| MboII | GAAGA | 4 cut(s) | 38, 167, 214, 237 |
| MflI | RGATCY | 2 cut(s) | 28, 345 |
| MluCI | AATT | 2 cut(s) | 8, 240 |
| MlyI | GAGTC | 2 cut(s) | 54, 328 |
| MnlI | CCTC | 1 cut(s) | 95 |
| Mph1103I | ATGCAT | 2 cut(s) | 185, 199 |
| MseI | TTAA | 2 cut(s) | 65, 376 |
| MslI | CAYNNNNRTG | 1 cut(s) | 21 |
| Mva1269I | GAATGC | 1 cut(s) | 151 |
| NdeII | GATC | 4 cut(s) | 28, 70, 319, 345 |
| NlaIII | CATG | 3 cut(s) | 136, 187, 201 |
| NmeAIII | GCCGAG | 1 cut(s) | 115 |
| NmuCI | GTSAC | 1 cut(s) | 284 |
| NsiI | ATGCAT | 2 cut(s) | 185, 199 |
| PaeR7I | CTCGAG | 1 cut(s) | 276 |
| PctI | GAATGC | 1 cut(s) | 151 |
| PleI | GAGTC | 2 cut(s) | 54, 328 |
| PpsI | GAGTC | 2 cut(s) | 54, 328 |
| PspXI | VCTCGAGB | 1 cut(s) | 276 |
| PsuI | RGATCY | 2 cut(s) | 28, 345 |
| RsaI | GTAC | 1 cut(s) | 38 |
| RsaNI | GTAC | 1 cut(s) | 37 |
| RseI | CAYNNNNRTG | 1 cut(s) | 21 |
| SaqAI | TTAA | 2 cut(s) | 65, 376 |
| Sau3AI | GATC | 4 cut(s) | 28, 70, 319, 345 |
| SchI | GAGTC | 2 cut(s) | 54, 328 |
| SetI | ASST | 2 cut(s) | 166, 277 |
| Sfr274I | CTCGAG | 1 cut(s) | 276 |
| SlaI | CTCGAG | 1 cut(s) | 276 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 21 |
| SmlI | CTYRAG | 2 cut(s) | 228, 276 |
| SmoI | CTYRAG | 2 cut(s) | 228, 276 |
| SpeI | ACTAGT | 1 cut(s) | 358 |
| Sse9I | AATT | 2 cut(s) | 8, 240 |
| SsiI | CCGC | 1 cut(s) | 368 |
| SspMI | CTAG | 1 cut(s) | 359 |
| TaqI | TCGA | 3 cut(s) | 58, 166, 277 |
| TasI | AATT | 2 cut(s) | 8, 240 |
| TatI | WGTACW | 1 cut(s) | 36 |
| Tru1I | TTAA | 2 cut(s) | 65, 376 |
| Tru9I | TTAA | 2 cut(s) | 65, 376 |
| TseFI | GTSAC | 1 cut(s) | 284 |
| Tsp45I | GTSAC | 1 cut(s) | 284 |
| TspDTI | ATGAA | 6 cut(s) | 21, 39, 105, 228, 237, 241 |
| XapI | RAATTY | 2 cut(s) | 8, 240 |
| XhoI | CTCGAG | 1 cut(s) | 276 |
| XspI | CTAG | 1 cut(s) | 359 |
| Zsp2I | ATGCAT | 2 cut(s) | 185, 199 |