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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000033868 |
| rosa_roxburghii | Rroxscaffold_1G00042280 |
| rosa_samantha | Rh5AG261600 Rh5CG298800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 155 |
| AclWI | GGATC | 1 cut(s) | 25 |
| AcsI | RAATTY | 1 cut(s) | 185 |
| AfaI | GTAC | 2 cut(s) | 25, 230 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 206 |
| AgsI | TTSAA | 2 cut(s) | 179, 191 |
| AluBI | AGCT | 2 cut(s) | 182, 194 |
| AluI | AGCT | 2 cut(s) | 182, 194 |
| AlwI | GGATC | 1 cut(s) | 25 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 14 |
| ApoI | RAATTY | 1 cut(s) | 185 |
| BclI | TGATCA | 1 cut(s) | 145 |
| BfaI | CTAG | 2 cut(s) | 164, 206 |
| BisI | GCNGC | 1 cut(s) | 156 |
| BlsI | GCNGC | 1 cut(s) | 157 |
| BpuEI | CTTGAG | 1 cut(s) | 242 |
| BsaAI | YACGTR | 1 cut(s) | 232 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 206 |
| Bse1I | ACTGG | 1 cut(s) | 95 |
| BseGI | GGATG | 1 cut(s) | 118 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BseNI | ACTGG | 1 cut(s) | 95 |
| BslFI | GGGAC | 1 cut(s) | 138 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BsmFI | GGGAC | 1 cut(s) | 138 |
| Bsp143I | GATC | 2 cut(s) | 17, 145 |
| BspACI | CCGC | 1 cut(s) | 155 |
| BspPI | GGATC | 1 cut(s) | 25 |
| BsrI | ACTGG | 1 cut(s) | 95 |
| BssMI | GATC | 2 cut(s) | 17, 145 |
| BstBAI | YACGTR | 1 cut(s) | 232 |
| BstC8I | GCNNGC | 1 cut(s) | 34 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 204 |
| BstF5I | GGATG | 1 cut(s) | 118 |
| BstKTI | GATC | 2 cut(s) | 20, 148 |
| BstMBI | GATC | 2 cut(s) | 17, 145 |
| BtsCI | GGATG | 1 cut(s) | 118 |
| Cac8I | GCNNGC | 1 cut(s) | 34 |
| CaiI | CAGNNNCTG | 1 cut(s) | 14 |
| Csp6I | GTAC | 2 cut(s) | 24, 229 |
| CviAII | CATG | 1 cut(s) | 21 |
| CviJI | RGCY | 5 cut(s) | 32, 143, 158, 182, 194 |
| CviKI_1 | RGCY | 5 cut(s) | 32, 143, 158, 182, 194 |
| CviQI | GTAC | 2 cut(s) | 24, 229 |
| DpnI | GATC | 2 cut(s) | 19, 147 |
| DpnII | GATC | 2 cut(s) | 17, 145 |
| DraI | TTTAAA | 1 cut(s) | 51 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 204 |
| FaeI | CATG | 1 cut(s) | 24 |
| FaiI | YATR | 1 cut(s) | 22 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 204, 236 |
| FaqI | GGGAC | 1 cut(s) | 138 |
| FatI | CATG | 1 cut(s) | 20 |
| FbaI | TGATCA | 1 cut(s) | 145 |
| Fnu4HI | GCNGC | 1 cut(s) | 156 |
| FokI | GGATG | 1 cut(s) | 125 |
| Fsp4HI | GCNGC | 1 cut(s) | 156 |
| FspBI | CTAG | 2 cut(s) | 164, 206 |
| GluI | GCNGC | 1 cut(s) | 156 |
| Hin1II | CATG | 1 cut(s) | 24 |
| HinfI | GANTC | 2 cut(s) | 86, 126 |
| Hpy188I | TCNGA | 1 cut(s) | 91 |
| Hpy188III | TCNNGA | 3 cut(s) | 62, 149, 221 |
| HpyAV | CCTTC | 1 cut(s) | 229 |
| HpyCH4IV | ACGT | 1 cut(s) | 231 |
| HpyCH4V | TGCA | 1 cut(s) | 106 |
| HpySE526I | ACGT | 1 cut(s) | 231 |
| Hsp92II | CATG | 1 cut(s) | 24 |
| Ksp22I | TGATCA | 1 cut(s) | 145 |
| Kzo9I | GATC | 2 cut(s) | 17, 145 |
| LpnPI | CCDG | 3 cut(s) | 42, 46, 108 |
| MaeI | CTAG | 2 cut(s) | 164, 206 |
| MaeII | ACGT | 1 cut(s) | 231 |
| MalI | GATC | 2 cut(s) | 19, 147 |
| MboI | GATC | 2 cut(s) | 17, 145 |
| MboII | GAAGA | 1 cut(s) | 224 |
| MluCI | AATT | 2 cut(s) | 134, 185 |
| MlyI | GAGTC | 1 cut(s) | 120 |
| MmeI | TCCRAC | 1 cut(s) | 154 |
| MnlI | CCTC | 2 cut(s) | 133, 210 |
| MseI | TTAA | 2 cut(s) | 42, 50 |
| NdeII | GATC | 2 cut(s) | 17, 145 |
| NlaIII | CATG | 1 cut(s) | 24 |
| PfeI | GAWTC | 1 cut(s) | 86 |
| PkrI | GCNGC | 1 cut(s) | 157 |
| PleI | GAGTC | 1 cut(s) | 120 |
| PpsI | GAGTC | 1 cut(s) | 120 |
| Ppu21I | YACGTR | 1 cut(s) | 232 |
| PstNI | CAGNNNCTG | 1 cut(s) | 14 |
| RsaI | GTAC | 2 cut(s) | 25, 230 |
| RsaNI | GTAC | 2 cut(s) | 24, 229 |
| SaqAI | TTAA | 2 cut(s) | 42, 50 |
| SatI | GCNGC | 1 cut(s) | 156 |
| Sau3AI | GATC | 2 cut(s) | 17, 145 |
| SchI | GAGTC | 1 cut(s) | 120 |
| SetI | ASST | 5 cut(s) | 184, 196, 202, 234, 240 |
| SmlI | CTYRAG | 1 cut(s) | 221 |
| SmoI | CTYRAG | 1 cut(s) | 221 |
| Sse9I | AATT | 2 cut(s) | 134, 185 |
| SsiI | CCGC | 1 cut(s) | 155 |
| SspMI | CTAG | 2 cut(s) | 164, 206 |
| TaiI | ACGT | 1 cut(s) | 234 |
| TasI | AATT | 2 cut(s) | 134, 185 |
| TauI | GCSGC | 1 cut(s) | 158 |
| TfiI | GAWTC | 1 cut(s) | 86 |
| Tru1I | TTAA | 2 cut(s) | 42, 50 |
| Tru9I | TTAA | 2 cut(s) | 42, 50 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 204 |
| XapI | RAATTY | 1 cut(s) | 185 |
| XspI | CTAG | 2 cut(s) | 164, 206 |