XH XS domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom11g08770 |
| rosa_multiflora | Rmu_sc0002915.1_g000017 |
| rosa_samantha | Rh5BG441200 Rh5BG441300 Rh5CG463800 Rh5CG463900 |
| rosa_wichuraiana | Rw5G040020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 215, 935 |
| Acc36I | ACCTGC | 2 cut(s) | 215, 935 |
| AccBSI | CCGCTC | 1 cut(s) | 664 |
| AccII | CGCG | 1 cut(s) | 1149 |
| AccIII | TCCGGA | 1 cut(s) | 1245 |
| AciI | CCGC | 1 cut(s) | 664 |
| AclWI | GGATC | 1 cut(s) | 1278 |
| AcoI | YGGCCR | 1 cut(s) | 1380 |
| AcsI | RAATTY | 3 cut(s) | 1210, 1344, 1496 |
| AcuI | CTGAAG | 5 cut(s) | 126, 194, 434, 674, 914 |
| AfaI | GTAC | 1 cut(s) | 1473 |
| AflII | CTTAAG | 5 cut(s) | 254, 377, 617, 857, 974 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 525, 765 |
| Alw21I | GWGCWC | 2 cut(s) | 561, 1245 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| AlwI | GGATC | 1 cut(s) | 1278 |
| Aor13HI | TCCGGA | 1 cut(s) | 1245 |
| AoxI | GGCC | 2 cut(s) | 69, 1380 |
| ApeKI | GCWGC | 3 cut(s) | 424, 904, 1144 |
| ApoI | RAATTY | 3 cut(s) | 1210, 1344, 1496 |
| AspLEI | GCGC | 5 cut(s) | 388, 628, 868, 1108, 1149 |
| AsuHPI | GGTGA | 5 cut(s) | 239, 479, 719, 959, 1537 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 473, 506, 713, 746 |
| BalI | TGGCCA | 1 cut(s) | 1382 |
| BanII | GRGCYC | 1 cut(s) | 1245 |
| BauI | CACGAG | 4 cut(s) | 51, 272, 752, 992 |
| Bbv12I | GWGCWC | 2 cut(s) | 561, 1245 |
| BbvI | GCAGC | 3 cut(s) | 436, 916, 1156 |
| BccI | CCATC | 2 cut(s) | 66, 1330 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1433, 1467 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfaI | CTAG | 1 cut(s) | 962 |
| BfmI | CTRYAG | 2 cut(s) | 167, 1442 |
| BfoI | RGCGCY | 4 cut(s) | 389, 629, 869, 1109 |
| BfrI | CTTAAG | 5 cut(s) | 254, 377, 617, 857, 974 |
| BfuAI | ACCTGC | 2 cut(s) | 215, 935 |
| BglII | AGATCT | 3 cut(s) | 163, 655, 895 |
| BisI | GCNGC | 4 cut(s) | 425, 665, 905, 1145 |
| BlsI | GCNGC | 4 cut(s) | 426, 666, 906, 1146 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 525, 765 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 271, 303, 991, 1023 |
| BsaAI | YACGTR | 1 cut(s) | 1475 |
| BsaWI | WCCGGW | 1 cut(s) | 1245 |
| BseAI | TCCGGA | 1 cut(s) | 1245 |
| BseGI | GGATG | 2 cut(s) | 1297, 1345 |
| BseMII | CTCAG | 4 cut(s) | 302, 1022, 1251, 1308 |
| BseRI | GAGGAG | 2 cut(s) | 1253, 1310 |
| BseXI | GCAGC | 3 cut(s) | 436, 916, 1156 |
| Bsh1236I | CGCG | 1 cut(s) | 1149 |
| BshFI | GGCC | 2 cut(s) | 71, 1382 |
| BsiHKAI | GWGCWC | 2 cut(s) | 561, 1245 |
| BsiSI | CCGG | 1 cut(s) | 1246 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| BsnI | GGCC | 2 cut(s) | 71, 1382 |
| Bsp1286I | GDGCHC | 2 cut(s) | 561, 1245 |
| Bsp13I | TCCGGA | 1 cut(s) | 1245 |
| Bsp143I | GATC | 7 cut(s) | 11, 121, 163, 655, 895, 1254, 1270 |
| BspACI | CCGC | 1 cut(s) | 664 |
| BspANI | GGCC | 2 cut(s) | 71, 1382 |
| BspCNI | CTCAG | 4 cut(s) | 301, 1021, 1252, 1309 |
| BspEI | TCCGGA | 1 cut(s) | 1245 |
| BspFNI | CGCG | 1 cut(s) | 1149 |
| BspMAI | CTGCAG | 2 cut(s) | 171, 1446 |
| BspMI | ACCTGC | 2 cut(s) | 215, 935 |
| BspPI | GGATC | 1 cut(s) | 1278 |
| BspQI | GCTCTTC | 1 cut(s) | 1368 |
| BspTI | CTTAAG | 5 cut(s) | 254, 377, 617, 857, 974 |
| BsrBI | CCGCTC | 1 cut(s) | 664 |
| BssMI | GATC | 7 cut(s) | 11, 121, 163, 655, 895, 1254, 1270 |
| BssSI | CACGAG | 4 cut(s) | 51, 272, 752, 992 |
| Bst2BI | CACGAG | 4 cut(s) | 51, 272, 752, 992 |
| Bst4CI | ACNGT | 3 cut(s) | 486, 563, 726 |
| Bst6I | CTCTTC | 3 cut(s) | 1049, 1326, 1368 |
| BstAFI | CTTAAG | 5 cut(s) | 254, 377, 617, 857, 974 |
| BstBAI | YACGTR | 1 cut(s) | 1475 |
| BstC8I | GCNNGC | 1 cut(s) | 1380 |
| BstDEI | CTNAG | 4 cut(s) | 288, 1008, 1260, 1317 |
| BstF5I | GGATG | 2 cut(s) | 1297, 1345 |
| BstFNI | CGCG | 1 cut(s) | 1149 |
| BstH2I | RGCGCY | 4 cut(s) | 389, 629, 869, 1109 |
| BstHHI | GCGC | 5 cut(s) | 388, 628, 868, 1108, 1149 |
| BstKTI | GATC | 7 cut(s) | 14, 124, 166, 658, 898, 1257, 1273 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMBI | GATC | 7 cut(s) | 11, 121, 163, 655, 895, 1254, 1270 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 175 |
| BstNSI | RCATGY | 1 cut(s) | 960 |
| BstSFI | CTRYAG | 2 cut(s) | 167, 1442 |
| BstSNI | TACGTA | 1 cut(s) | 1475 |
| BstUI | CGCG | 1 cut(s) | 1149 |
| BstV1I | GCAGC | 3 cut(s) | 436, 916, 1156 |
| BstX2I | RGATCY | 3 cut(s) | 163, 655, 895 |
| BstYI | RGATCY | 3 cut(s) | 163, 655, 895 |
| BsuRI | GGCC | 2 cut(s) | 71, 1382 |
| BtsCI | GGATG | 2 cut(s) | 1297, 1345 |
| BtsIMutI | CAGTG | 3 cut(s) | 568, 1257, 1434 |
| BveI | ACCTGC | 2 cut(s) | 215, 935 |
| Cac8I | GCNNGC | 1 cut(s) | 1380 |
| CfoI | GCGC | 5 cut(s) | 388, 628, 868, 1108, 1149 |
| Csp6I | GTAC | 1 cut(s) | 1472 |
| CviAII | CATG | 3 cut(s) | 957, 1328, 1551 |
| CviQI | GTAC | 1 cut(s) | 1472 |
| DdeI | CTNAG | 4 cut(s) | 288, 1008, 1260, 1317 |
| DpnI | GATC | 7 cut(s) | 13, 123, 165, 657, 897, 1256, 1272 |
| DpnII | GATC | 7 cut(s) | 11, 121, 163, 655, 895, 1254, 1270 |
| DraI | TTTAAA | 1 cut(s) | 99 |
| DriI | GACNNNNNGTC | 2 cut(s) | 525, 765 |
| EaeI | YGGCCR | 1 cut(s) | 1380 |
| Eam1104I | CTCTTC | 3 cut(s) | 1049, 1326, 1368 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 525, 765 |
| EarI | CTCTTC | 3 cut(s) | 1049, 1326, 1368 |
| Ecl136II | GAGCTC | 1 cut(s) | 1243 |
| Eco105I | TACGTA | 1 cut(s) | 1475 |
| Eco147I | AGGCCT | 1 cut(s) | 71 |
| Eco24I | GRGCYC | 1 cut(s) | 1245 |
| Eco32I | GATATC | 1 cut(s) | 28 |
| Eco53kI | GAGCTC | 1 cut(s) | 1243 |
| Eco57I | CTGAAG | 5 cut(s) | 126, 194, 434, 674, 914 |
| EcoICRI | GAGCTC | 1 cut(s) | 1243 |
| EcoRV | GATATC | 1 cut(s) | 28 |
| EcoT22I | ATGCAT | 2 cut(s) | 1552, 1562 |
| EcoT38I | GRGCYC | 1 cut(s) | 1245 |
| FaeI | CATG | 3 cut(s) | 960, 1331, 1554 |
| FaiI | YATR | 7 cut(s) | 958, 1329, 1478, 1482, 1484, 1548, 1552 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 59, 91 |
| FatI | CATG | 3 cut(s) | 956, 1327, 1550 |
| Fnu4HI | GCNGC | 4 cut(s) | 425, 665, 905, 1145 |
| FokI | GGATG | 2 cut(s) | 1304, 1352 |
| FriOI | GRGCYC | 1 cut(s) | 1245 |
| Fsp4HI | GCNGC | 4 cut(s) | 425, 665, 905, 1145 |
| FspBI | CTAG | 1 cut(s) | 962 |
| GlaI | GCGC | 5 cut(s) | 387, 627, 867, 1107, 1148 |
| GluI | GCNGC | 4 cut(s) | 425, 665, 905, 1145 |
| HaeII | RGCGCY | 4 cut(s) | 389, 629, 869, 1109 |
| HaeIII | GGCC | 2 cut(s) | 71, 1382 |
| HapII | CCGG | 1 cut(s) | 1246 |
| HhaI | GCGC | 5 cut(s) | 388, 628, 868, 1108, 1149 |
| Hin1II | CATG | 3 cut(s) | 960, 1331, 1554 |
| Hin6I | GCGC | 5 cut(s) | 386, 626, 866, 1106, 1147 |
| HinP1I | GCGC | 5 cut(s) | 386, 626, 866, 1106, 1147 |
| HindIII | AAGCTT | 7 cut(s) | 134, 176, 311, 551, 791, 1031, 1537 |
| HpaII | CCGG | 1 cut(s) | 1246 |
| HphI | GGTGA | 5 cut(s) | 239, 479, 719, 959, 1537 |
| Hpy166II | GTNNAC | 8 cut(s) | 191, 230, 431, 470, 671, 710, 911, 950 |
| Hpy8I | GTNNAC | 8 cut(s) | 191, 230, 431, 470, 671, 710, 911, 950 |
| HpyCH4III | ACNGT | 3 cut(s) | 486, 563, 726 |
| HpyCH4IV | ACGT | 1 cut(s) | 1474 |
| HpyCH4V | TGCA | 8 cut(s) | 40, 169, 224, 944, 1171, 1444, 1550, 1560 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 175 |
| HpyF3I | CTNAG | 4 cut(s) | 288, 1008, 1260, 1317 |
| HpySE526I | ACGT | 1 cut(s) | 1474 |
| Hsp92II | CATG | 3 cut(s) | 960, 1331, 1554 |
| HspAI | GCGC | 5 cut(s) | 386, 626, 866, 1106, 1147 |
| Kpn2I | TCCGGA | 1 cut(s) | 1245 |
| Kzo9I | GATC | 7 cut(s) | 11, 121, 163, 655, 895, 1254, 1270 |
| LguI | GCTCTTC | 1 cut(s) | 1368 |
| LmnI | GCTCC | 4 cut(s) | 79, 1240, 1248, 1420 |
| Lsp1109I | GCAGC | 3 cut(s) | 436, 916, 1156 |
| MaeI | CTAG | 1 cut(s) | 962 |
| MaeII | ACGT | 1 cut(s) | 1474 |
| MaeIII | GTNAC | 1 cut(s) | 53 |
| MalI | GATC | 7 cut(s) | 13, 123, 165, 657, 897, 1256, 1272 |
| MbiI | CCGCTC | 1 cut(s) | 664 |
| MboI | GATC | 7 cut(s) | 11, 121, 163, 655, 895, 1254, 1270 |
| MflI | RGATCY | 3 cut(s) | 163, 655, 895 |
| MhlI | GDGCHC | 2 cut(s) | 561, 1245 |
| MlsI | TGGCCA | 1 cut(s) | 1382 |
| MluCI | AATT | 4 cut(s) | 1157, 1210, 1344, 1496 |
| MluNI | TGGCCA | 1 cut(s) | 1382 |
| MlyI | GAGTC | 1 cut(s) | 1322 |
| MmeI | TCCRAC | 1 cut(s) | 1245 |
| Mox20I | TGGCCA | 1 cut(s) | 1382 |
| Mph1103I | ATGCAT | 2 cut(s) | 1552, 1562 |
| MroI | TCCGGA | 1 cut(s) | 1245 |
| MscI | TGGCCA | 1 cut(s) | 1382 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1555 |
| Msp20I | TGGCCA | 1 cut(s) | 1382 |
| MspCI | CTTAAG | 5 cut(s) | 254, 377, 617, 857, 974 |
| MspI | CCGG | 1 cut(s) | 1246 |
| MvnI | CGCG | 1 cut(s) | 1149 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 175 |
| NdeII | GATC | 7 cut(s) | 11, 121, 163, 655, 895, 1254, 1270 |
| NlaIII | CATG | 3 cut(s) | 960, 1331, 1554 |
| NmuCI | GTSAC | 1 cut(s) | 53 |
| NsiI | ATGCAT | 2 cut(s) | 1552, 1562 |
| NspI | RCATGY | 1 cut(s) | 960 |
| PaqCI | CACCTGC | 2 cut(s) | 215, 935 |
| PceI | AGGCCT | 1 cut(s) | 71 |
| PciSI | GCTCTTC | 1 cut(s) | 1368 |
| PfeI | GAWTC | 9 cut(s) | 301, 326, 541, 566, 781, 806, 1021, 1046, 1279 |
| PkrI | GCNGC | 4 cut(s) | 426, 666, 906, 1146 |
| PleI | GAGTC | 1 cut(s) | 1321 |
| PpsI | GAGTC | 1 cut(s) | 1321 |
| Ppu21I | YACGTR | 1 cut(s) | 1475 |
| Psp124BI | GAGCTC | 1 cut(s) | 1245 |
| PstI | CTGCAG | 2 cut(s) | 171, 1446 |
| PsuI | RGATCY | 3 cut(s) | 163, 655, 895 |
| RsaI | GTAC | 1 cut(s) | 1473 |
| RsaNI | GTAC | 1 cut(s) | 1472 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1555 |
| SacI | GAGCTC | 1 cut(s) | 1245 |
| SapI | GCTCTTC | 1 cut(s) | 1368 |
| SatI | GCNGC | 4 cut(s) | 425, 665, 905, 1145 |
| Sau3AI | GATC | 7 cut(s) | 11, 121, 163, 655, 895, 1254, 1270 |
| SchI | GAGTC | 1 cut(s) | 1322 |
| SduI | GDGCHC | 2 cut(s) | 561, 1245 |
| SfcI | CTRYAG | 2 cut(s) | 167, 1442 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1555 |
| SnaBI | TACGTA | 1 cut(s) | 1475 |
| Sse9I | AATT | 4 cut(s) | 1157, 1210, 1344, 1496 |
| SseBI | AGGCCT | 1 cut(s) | 71 |
| SsiI | CCGC | 1 cut(s) | 664 |
| SspI | AATATT | 1 cut(s) | 1186 |
| SspMI | CTAG | 1 cut(s) | 962 |
| SstI | GAGCTC | 1 cut(s) | 1245 |
| StuI | AGGCCT | 1 cut(s) | 71 |
| TaaI | ACNGT | 3 cut(s) | 486, 563, 726 |
| TaiI | ACGT | 1 cut(s) | 1477 |
| TaqI | TCGA | 1 cut(s) | 1348 |
| TasI | AATT | 4 cut(s) | 1157, 1210, 1344, 1496 |
| TauI | GCSGC | 1 cut(s) | 667 |
| TfiI | GAWTC | 9 cut(s) | 301, 326, 541, 566, 781, 806, 1021, 1046, 1279 |
| TscAI | CASTG | 3 cut(s) | 568, 1264, 1441 |
| TseFI | GTSAC | 1 cut(s) | 53 |
| TseI | GCWGC | 3 cut(s) | 424, 904, 1144 |
| Tsp45I | GTSAC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 9 cut(s) | 308, 548, 788, 1028, 1169, 1221, 1344, 1356, 1499 |
| TspRI | CASTG | 3 cut(s) | 568, 1264, 1441 |
| Vha464I | CTTAAG | 5 cut(s) | 254, 377, 617, 857, 974 |
| XapI | RAATTY | 3 cut(s) | 1210, 1344, 1496 |
| XbaI | TCTAGA | 1 cut(s) | 961 |
| XceI | RCATGY | 1 cut(s) | 960 |
| XspI | CTAG | 1 cut(s) | 962 |
| Zsp2I | ATGCAT | 2 cut(s) | 1552, 1562 |