Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0010900

Physical Location & Seq

Genomic Coordinates Forward (+)

61071961 .. 61076079

Gene Structure 4119 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG391100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGGCCCTCACCCCATGCCCTCACCTCTTCCACCTCCCACTTCACTCTTCATCCTCTTCCTCTTCCTCTTCCTCTCACCTCTTCTTCTTCTCCCAATCGCCGTCTTCTCCGCCGCCGATTGCCCTGCGAATCAGCGATGTCTCCGCCGCGTTCTCTCCGGCGAAGCTGTCGTCGGCGAGAGCCAAGTGCTTCAAATCCGCGACCGAGGAGGACCGCTTCAGCGAGCCGGAGACCGTCTCCGATGACGAAGCTGGAGATCGCGATAATGTTAAGACCGCGTCGACGGCGACCGGTGGATCGTTGAACGTTACGACGTCGTTCACCGGTGACTCTCTGTTTCTCGGGATTCGCGAGCCGGTCTACGAGGTGGAAGAAGTGAAGGCTAATGGGACGATATCTATTAGAAAAATTAACAGGCGTCAGCTACTGAAGTCAAGTGGTCTTCGTCCACGTGATATCCGAAGTGTTGATCCTTCATTGTTTCTGACAAATTCGATGCCTTCTTTGCTGGTCCGCGAGCGTGCTCTTCTGTTAAATTTGGGGTCATTACGTGCAATTGCAATGCAAGAGCGTGTCCTTATATTTGACTACAACCGTAAAGGAGGAAAAGCTTTCATAGAAGCACTACTGCCTCGACTGAACCCCAAAAATATGAATGGAGGACCATCTATGCCATTTGAACTTGAGGTTGTTGAAGCAGCATTGCTCTCAAGAATACAGCGCTTGGAACGAAGATTAATGGATTTAGAACCTCGTGTTCAAAATATTCTAGCGGTTTTACCCAACAAGTTAACAGCTGACATACTGGAGCAACTTCGTATCAGCAAGCAAACCTTGGTTGAATTGGGTTCAAGGGCAGGGGCCCTTAGACAAATGTTGTTTGATCTTTTGGAGGACCCTGAAGAAATACGCCGTATATGTATTATGGGAAGAAACTGCATACTCAAGAGGGGAAGTGATGTTGTTGAATGCTCTGTTCCTTTAGAGAAGCAGATTGCTGAGCAAGAAGAGGAAGAAATTGAGATGCTTTTGGAAAATTATCTTCAAAGATGTGAATCTTGCCATGGCCAGGCTGAAAGGCTTCTTGATTCTGCTAAAGAAATGGAAGATTCTATAGCTGTTAACTTGAGTTCTCGGAGGCTTGAGGTTAGCAGAGTGGAATTGCTCCTTCAGGTTGGTACCTTTTGTGTGGCACTGGGTGCTCTGGTTGCAGGTATATTTGGCATGAACTTAAGATCCTATCTTGAAGAACATGTGTTCGCATTTTGGTTTACGACAGCTGGGATAATTGTTGGTGCTGTTGTGGGATTTTATCTAATGTATTCATATCTCAAGATGCGAAAAATATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006996 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009657 GO:0009668 GO:0009941 GO:0009987 GO:0010027 GO:0010117 GO:0010960 GO:0015075 GO:0015095 GO:0015318 GO:0015693 GO:0016043 GO:0022857 GO:0022890 GO:0030001 GO:0031967 GO:0031975 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055065 GO:0055080 GO:0055085 GO:0061024 GO:0065007 GO:0065008 GO:0070838 GO:0071840 GO:0072507 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:1903830

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CorA

Protein Analysis

450

Amino Acids

50.1

Weight (kDa)

6.18

Isoelectric Point (pI)

59.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MRS2-like	PF22099	131 - 380	3.6e-36	Magnesium transporter MRS2-like
CorA	PF01544	262 - 439	5.8e-06	CorA-like Mg2+ transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22830 AT5G22830
fragaria_vesca	FvH4_3g30160 FvH4_3g30160 FvH4_3g30160
malus_domestica	MD03G1131000.v1.1 MD11G1153500.v1.1
prunus_persica	Prupe.6G116100_v2.0.a1
pyrus_communis	pycom11g12530
rosa_chinensis	RchiOBHm_Chr5g0055951
rosa_laevigata	RLG00000035036
rosa_multiflora	Rmu_sc0000604.1_g000004 Rmu_sc0014108.1_g000002
rosa_roxburghii	Rroxscaffold_1G00024350
rosa_rugosa	Rorug05G0296400
rosa_samantha	Rh5AG367700 Rh5BG378000 Rh5CG401300 Rh5DG391100
rosa_wichuraiana	Rw5G034490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	317
Acc36I	ACCTGC	1 cut(s)	1202
Acc65I	GGTACC	1 cut(s)	1178
AccB1I	GGYRCC	1 cut(s)	1178
AccI	GTMKAC	2 cut(s)	281, 360
AccII	CGCG	6 cut(s)	149, 200, 261, 278, 351, 516
AciI	CCGC	9 cut(s)	110, 113, 144, 147, 198, 214, 276, 514, 773
AclI	AACGTT	1 cut(s)	306
AclWI	GGATC	3 cut(s)	304, 464, 1230
AcoI	YGGCCR	1 cut(s)	1066
AcsI	RAATTY	2 cut(s)	490, 535
AcuI	CTGAAG	4 cut(s)	202, 449, 921, 1154
AcvI	CACGTG	1 cut(s)	452
AcyI	GRCGYC	2 cut(s)	314, 418
AdeI	CACNNNGTG	1 cut(s)	1199
AfaI	GTAC	1 cut(s)	1180
AfeI	AGCGCT	1 cut(s)	722
AfiI	CCNNNNNNNGG	1 cut(s)	1069
AflII	CTTAAG	1 cut(s)	1231
AflIII	ACRYGT	1 cut(s)	1252
AgeI	ACCGGT	2 cut(s)	290, 323
AjnI	CCWGG	1 cut(s)	1068
AloI	GAACNNNNNNTCC	2 cut(s)	1220, 1252
AluBI	AGCT	7 cut(s)	166, 251, 424, 611, 797, 1118, 1280
AluI	AGCT	7 cut(s)	166, 251, 424, 611, 797, 1118, 1280
Alw21I	GWGCWC	2 cut(s)	526, 1204
Alw26I	GTCTC	3 cut(s)	145, 224, 241
AlwI	GGATC	3 cut(s)	304, 464, 1230
AlwNI	CAGNNNCTG	1 cut(s)	427
Ama87I	CYCGRG	1 cut(s)	341
Aor51HI	AGCGCT	1 cut(s)	722
AoxI	GGCC	3 cut(s)	3, 861, 1066
ApaI	GGGCCC	1 cut(s)	865
ApeKI	GCWGC	1 cut(s)	698
ApoI	RAATTY	2 cut(s)	490, 535
ArsI	GACNNNNNNTTYG	2 cut(s)	155, 187
AseI	ATTAAT	1 cut(s)	737
AsiGI	ACCGGT	2 cut(s)	290, 323
Asp700I	GAANNNNTTC	1 cut(s)	1080
Asp718I	GGTACC	1 cut(s)	1178
AspLEI	GCGC	1 cut(s)	723
AspS9I	GGNCC	7 cut(s)	4, 211, 511, 662, 861, 862, 895
AsuHPI	GGTGA	4 cut(s)	14, 68, 313, 338
AvaI	CYCGRG	1 cut(s)	341
AvaII	GGWCC	4 cut(s)	211, 511, 662, 895
BaeGI	GKGCMC	1 cut(s)	865
BalI	TGGCCA	1 cut(s)	1068
BanI	GGYRCC	1 cut(s)	1178
BanII	GRGCYC	1 cut(s)	865
BauI	CACGAG	1 cut(s)	753
BbrPI	CACGTG	1 cut(s)	452
BbsI	GAAGAC	2 cut(s)	96, 434
Bbv12I	GWGCWC	2 cut(s)	526, 1204
BbvI	GCAGC	1 cut(s)	710
BccI	CCATC	1 cut(s)	673
BceAI	ACGGC	3 cut(s)	85, 300, 897
BcgI	CGANNNNNNTGC	2 cut(s)	106, 140
BciT130I	CCWGG	1 cut(s)	1070
BcoDI	GTCTC	3 cut(s)	145, 224, 241
BfaI	CTAG	1 cut(s)	770
BfmI	CTRYAG	1 cut(s)	1113
BfoI	RGCGCY	1 cut(s)	724
BfrI	CTTAAG	1 cut(s)	1231
BfuAI	ACCTGC	1 cut(s)	1202
BisI	GCNGC	3 cut(s)	113, 147, 699
BlpI	GCTNAGC	1 cut(s)	999
BlsI	GCNGC	3 cut(s)	114, 148, 700
Bme1390I	CCNGG	1 cut(s)	1070
Bme18I	GGWCC	4 cut(s)	211, 511, 662, 895
BmeT110I	CYCGRG	1 cut(s)	341
BmgT120I	GGNCC	7 cut(s)	4, 211, 511, 662, 861, 862, 895
BmiI	GGNNCC	4 cut(s)	862, 863, 897, 1180
BmrFI	CCNGG	1 cut(s)	1070
BmrI	ACTGGG	1 cut(s)	1205
BmsI	GCATC	3 cut(s)	486, 1014, 1326
BmuI	ACTGGG	1 cut(s)	1205
BpiI	GAAGAC	2 cut(s)	96, 434
BplI	GAGNNNNNCTC	2 cut(s)	221, 253
BpmI	CTGGAG	2 cut(s)	273, 827
Bpu1102I	GCTNAGC	1 cut(s)	999
BpuEI	CTTGAG	6 cut(s)	694, 704, 929, 1147, 1163, 1316
BsaAI	YACGTR	2 cut(s)	452, 551
BsaBI	GATNNNNATC	1 cut(s)	1054
BsaHI	GRCGYC	2 cut(s)	314, 418
BsaI	GGTCTC	1 cut(s)	224
BsaJI	CCNNGG	3 cut(s)	204, 834, 1063
BsaWI	WCCGGW	2 cut(s)	290, 323
Bsc4I	CCNNNNNNNGG	1 cut(s)	1069
Bse118I	RCCGGY	3 cut(s)	290, 323, 355
Bse1I	ACTGG	2 cut(s)	810, 1200
Bse3DI	GCAATG	2 cut(s)	567, 701
Bse8I	GATNNNNATC	1 cut(s)	1054
BseBI	CCWGG	1 cut(s)	1070
BseDI	CCNNGG	3 cut(s)	204, 834, 1063
BseGI	GGATG	1 cut(s)	50
BseJI	GATNNNNATC	1 cut(s)	1054
BseLI	CCNNNNNNNGG	1 cut(s)	1069
BseMI	GCAATG	2 cut(s)	567, 701
BseMII	CTCAG	1 cut(s)	990
BseNI	ACTGG	2 cut(s)	810, 1200
BseRI	GAGGAG	1 cut(s)	221
BseSI	GKGCMC	1 cut(s)	865
BseXI	GCAGC	1 cut(s)	710
BseYI	CCCAGC	1 cut(s)	1280
Bsh1236I	CGCG	6 cut(s)	149, 200, 261, 278, 351, 516
Bsh1285I	CGRYCG	2 cut(s)	204, 291
BshFI	GGCC	3 cut(s)	5, 863, 1068
BshNI	GGYRCC	1 cut(s)	1178
BshTI	ACCGGT	2 cut(s)	290, 323
BsiEI	CGRYCG	2 cut(s)	204, 291
BsiHKAI	GWGCWC	2 cut(s)	526, 1204
BsiHKCI	CYCGRG	1 cut(s)	341
BsiSI	CCGG	5 cut(s)	158, 227, 291, 324, 356
BslFI	GGGAC	1 cut(s)	403
BslI	CCNNNNNNNGG	1 cut(s)	1069
BsmAI	GTCTC	3 cut(s)	145, 224, 241
BsmBI	CGTCTC	1 cut(s)	241
BsmFI	GGGAC	1 cut(s)	403
BsmI	GAATGC	1 cut(s)	974
BsnI	GGCC	3 cut(s)	5, 863, 1068
Bso31I	GGTCTC	1 cut(s)	224
BsoBI	CYCGRG	1 cut(s)	341
Bsp120I	GGGCCC	1 cut(s)	861
Bsp1286I	GDGCHC	3 cut(s)	526, 865, 1204
Bsp143I	GATC	5 cut(s)	256, 296, 469, 883, 1235
Bsp1720I	GCTNAGC	1 cut(s)	999
Bsp19I	CCATGG	1 cut(s)	1063
Bsp68I	TCGCGA	2 cut(s)	261, 351
BspACI	CCGC	9 cut(s)	110, 113, 144, 147, 198, 214, 276, 514, 773
BspANI	GGCC	3 cut(s)	5, 863, 1068
BspCNI	CTCAG	1 cut(s)	991
BspFNI	CGCG	6 cut(s)	149, 200, 261, 278, 351, 516
BspLI	GGNNCC	4 cut(s)	862, 863, 897, 1180
BspMI	ACCTGC	1 cut(s)	1202
BspPI	GGATC	3 cut(s)	304, 464, 1230
BspQI	GCTCTTC	1 cut(s)	531
BspT107I	GGYRCC	1 cut(s)	1178
BspTI	CTTAAG	1 cut(s)	1231
BspTNI	GGTCTC	1 cut(s)	224
BsrDI	GCAATG	2 cut(s)	567, 701
BsrFI	RCCGGY	3 cut(s)	290, 323, 355
BsrI	ACTGG	2 cut(s)	810, 1200
BssAI	RCCGGY	3 cut(s)	290, 323, 355
BssECI	CCNNGG	3 cut(s)	204, 834, 1063
BssMI	GATC	5 cut(s)	256, 296, 469, 883, 1235
BssNI	GRCGYC	2 cut(s)	314, 418
BssSI	CACGAG	1 cut(s)	753
BssT1I	CCWWGG	2 cut(s)	834, 1063
Bst2BI	CACGAG	1 cut(s)	753
Bst2UI	CCWGG	1 cut(s)	1070
Bst4CI	ACNGT	2 cut(s)	235, 596
Bst6I	CTCTTC	8 cut(s)	32, 52, 61, 67, 73, 86, 531, 1002
BstACI	GRCGYC	2 cut(s)	314, 418
BstAFI	CTTAAG	1 cut(s)	1231
BstAPI	GCANNNNNTGC	1 cut(s)	1199
BstBAI	YACGTR	2 cut(s)	452, 551
BstC8I	GCNNGC	5 cut(s)	224, 353, 518, 522, 827
BstDEI	CTNAG	2 cut(s)	866, 999
BstDSI	CCRYGG	1 cut(s)	1063
BstF5I	GGATG	1 cut(s)	50
BstFNI	CGCG	6 cut(s)	149, 200, 261, 278, 351, 516
BstH2I	RGCGCY	1 cut(s)	724
BstHHI	GCGC	1 cut(s)	723
BstKTI	GATC	5 cut(s)	259, 299, 472, 886, 1238
BstMAI	GTCTC	3 cut(s)	145, 224, 241
BstMBI	GATC	5 cut(s)	256, 296, 469, 883, 1235
BstMCI	CGRYCG	2 cut(s)	204, 291
BstMWI	GCNNNNNNNGC	4 cut(s)	284, 505, 1199, 1208
BstNI	CCWGG	1 cut(s)	1070
BstNSI	RCATGY	1 cut(s)	1256
BstSCI	CCNGG	1 cut(s)	1068
BstSFI	CTRYAG	1 cut(s)	1113
BstSLI	GKGCMC	1 cut(s)	865
BstUI	CGCG	6 cut(s)	149, 200, 261, 278, 351, 516
BstV1I	GCAGC	1 cut(s)	710
BstV2I	GAAGAC	2 cut(s)	96, 434
BstX2I	RGATCY	1 cut(s)	1235
BstYI	RGATCY	1 cut(s)	1235
BsuRI	GGCC	3 cut(s)	5, 863, 1068
BtgI	CCRYGG	1 cut(s)	1063
BtgZI	GCGATG	1 cut(s)	150
BtsCI	GGATG	1 cut(s)	50
BtsIMutI	CAGTG	1 cut(s)	1193
BtuMI	TCGCGA	2 cut(s)	261, 351
BveI	ACCTGC	1 cut(s)	1202
Cac8I	GCNNGC	5 cut(s)	224, 353, 518, 522, 827
CaiI	CAGNNNCTG	1 cut(s)	427
CfoI	GCGC	1 cut(s)	723
Cfr10I	RCCGGY	3 cut(s)	290, 323, 355
Cfr13I	GGNCC	7 cut(s)	4, 211, 511, 662, 861, 862, 895
CseI	GACGC	2 cut(s)	267, 407
Csp6I	GTAC	1 cut(s)	1179
CspAI	ACCGGT	2 cut(s)	290, 323
CviAII	CATG	4 cut(s)	15, 1064, 1225, 1253
CviQI	GTAC	1 cut(s)	1179
DdeI	CTNAG	2 cut(s)	866, 999
DpnI	GATC	5 cut(s)	258, 298, 471, 885, 1237
DpnII	GATC	5 cut(s)	256, 296, 469, 883, 1235
DraIII	CACNNNGTG	1 cut(s)	1199
EaeI	YGGCCR	1 cut(s)	1066
Eam1104I	CTCTTC	8 cut(s)	32, 52, 61, 67, 73, 86, 531, 1002
EarI	CTCTTC	8 cut(s)	32, 52, 61, 67, 73, 86, 531, 1002
EciI	GGCGGA	2 cut(s)	99, 133
Eco130I	CCWWGG	2 cut(s)	834, 1063
Eco24I	GRGCYC	1 cut(s)	865
Eco31I	GGTCTC	1 cut(s)	224
Eco32I	GATATC	2 cut(s)	396, 457
Eco47I	GGWCC	4 cut(s)	211, 511, 662, 895
Eco47III	AGCGCT	1 cut(s)	722
Eco57I	CTGAAG	4 cut(s)	202, 449, 921, 1154
Eco72I	CACGTG	1 cut(s)	452
Eco88I	CYCGRG	1 cut(s)	341
EcoO109I	RGGNCCY	3 cut(s)	861, 862, 895
EcoRII	CCWGG	1 cut(s)	1068
EcoRV	GATATC	2 cut(s)	396, 457
EcoT14I	CCWWGG	2 cut(s)	834, 1063
EcoT38I	GRGCYC	1 cut(s)	865
ErhI	CCWWGG	2 cut(s)	834, 1063
Esp3I	CGTCTC	1 cut(s)	241
FaeI	CATG	4 cut(s)	18, 1067, 1228, 1256
FalI	AAGNNNNNCTT	2 cut(s)	818, 850
FaqI	GGGAC	1 cut(s)	403
FatI	CATG	4 cut(s)	14, 1063, 1224, 1252
FblI	GTMKAC	2 cut(s)	281, 360
Fnu4HI	GCNGC	3 cut(s)	113, 147, 699
FokI	GGATG	1 cut(s)	37
FriOI	GRGCYC	1 cut(s)	865
Fsp4HI	GCNGC	3 cut(s)	113, 147, 699
FspBI	CTAG	1 cut(s)	770
GlaI	GCGC	1 cut(s)	722
GluI	GCNGC	3 cut(s)	113, 147, 699
GsaI	CCCAGC	1 cut(s)	1284
GsuI	CTGGAG	2 cut(s)	273, 827
HaeII	RGCGCY	1 cut(s)	724
HaeIII	GGCC	3 cut(s)	5, 863, 1068
HapII	CCGG	5 cut(s)	158, 227, 291, 324, 356
HgaI	GACGC	2 cut(s)	267, 407
HhaI	GCGC	1 cut(s)	723
Hin1I	GRCGYC	2 cut(s)	314, 418
Hin1II	CATG	4 cut(s)	18, 1067, 1228, 1256
Hin6I	GCGC	1 cut(s)	721
HinP1I	GCGC	1 cut(s)	721
HincII	GTYRAC	3 cut(s)	282, 792, 1123
HindII	GTYRAC	3 cut(s)	282, 792, 1123
HindIII	AAGCTT	1 cut(s)	609
HinfI	GANTC	6 cut(s)	129, 329, 346, 1055, 1088, 1109
HpaI	GTTAAC	2 cut(s)	792, 1123
HpaII	CCGG	5 cut(s)	158, 227, 291, 324, 356
HphI	GGTGA	4 cut(s)	14, 68, 313, 338
Hpy166II	GTNNAC	7 cut(s)	282, 321, 361, 449, 792, 1123, 1272
Hpy188I	TCNGA	4 cut(s)	241, 461, 486, 1137
Hpy188III	TCNNGA	8 cut(s)	260, 343, 350, 711, 946, 1085, 1244, 1333
Hpy8I	GTNNAC	7 cut(s)	282, 321, 361, 449, 792, 1123, 1272
Hpy99I	CGWCG	5 cut(s)	175, 283, 286, 316, 319
HpyAV	CCTTC	4 cut(s)	373, 483, 510, 1178
HpyCH4III	ACNGT	2 cut(s)	235, 596
HpyCH4IV	ACGT	4 cut(s)	306, 314, 451, 550
HpyCH4V	TGCA	5 cut(s)	554, 560, 565, 939, 1211
HpyF10VI	GCNNNNNNNGC	4 cut(s)	284, 505, 1199, 1208
HpyF3I	CTNAG	2 cut(s)	866, 999
HpySE526I	ACGT	4 cut(s)	306, 314, 451, 550
Hsp92I	GRCGYC	2 cut(s)	314, 418
Hsp92II	CATG	4 cut(s)	18, 1067, 1228, 1256
HspAI	GCGC	1 cut(s)	721
KpnI	GGTACC	1 cut(s)	1182
KspAI	GTTAAC	2 cut(s)	792, 1123
Kzo9I	GATC	5 cut(s)	256, 296, 469, 883, 1235
LguI	GCTCTTC	1 cut(s)	531
LmnI	GCTCC	2 cut(s)	808, 1170
Lsp1109I	GCAGC	1 cut(s)	710
LweI	GCATC	3 cut(s)	486, 1014, 1326
MaeI	CTAG	1 cut(s)	770
MaeII	ACGT	4 cut(s)	306, 314, 451, 550
MaeIII	GTNAC	2 cut(s)	307, 326
MalI	GATC	5 cut(s)	258, 298, 471, 885, 1237
MboI	GATC	5 cut(s)	256, 296, 469, 883, 1235
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	1 cut(s)	1235
MhlI	GDGCHC	3 cut(s)	526, 865, 1204
MlsI	TGGCCA	1 cut(s)	1068
MluCI	AATT	9 cut(s)	408, 490, 535, 555, 842, 1017, 1036, 1160, 1287
MluNI	TGGCCA	1 cut(s)	1068
MlyI	GAGTC	1 cut(s)	323
Mox20I	TGGCCA	1 cut(s)	1068
MroXI	GAANNNNTTC	1 cut(s)	1080
MscI	TGGCCA	1 cut(s)	1068
MseI	TTAA	7 cut(s)	270, 411, 533, 737, 791, 1122, 1232
Msp20I	TGGCCA	1 cut(s)	1068
MspA1I	CMGCKG	2 cut(s)	797, 1280
MspCI	CTTAAG	1 cut(s)	1231
MspI	CCGG	5 cut(s)	158, 227, 291, 324, 356
MspR9I	CCNGG	1 cut(s)	1070
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	1 cut(s)	974
MvaI	CCWGG	1 cut(s)	1070
MvnI	CGCG	6 cut(s)	149, 200, 261, 278, 351, 516
MwoI	GCNNNNNNNGC	4 cut(s)	284, 505, 1199, 1208
NcoI	CCATGG	1 cut(s)	1063
NdeII	GATC	5 cut(s)	256, 296, 469, 883, 1235
NlaIII	CATG	4 cut(s)	18, 1067, 1228, 1256
NlaIV	GGNNCC	4 cut(s)	862, 863, 897, 1180
NmuCI	GTSAC	1 cut(s)	326
NruI	TCGCGA	2 cut(s)	261, 351
NspI	RCATGY	1 cut(s)	1256
PciI	ACATGT	1 cut(s)	1252
PciSI	GCTCTTC	1 cut(s)	531
PcsI	WCGNNNNNNNCGW	2 cut(s)	348, 457
PctI	GAATGC	1 cut(s)	974
PdmI	GAANNNNTTC	1 cut(s)	1080
PfeI	GAWTC	5 cut(s)	129, 346, 1055, 1088, 1109
PflFI	GACNNNGTC	1 cut(s)	277
PinAI	ACCGGT	2 cut(s)	290, 323
PkrI	GCNGC	3 cut(s)	114, 148, 700
PleI	GAGTC	1 cut(s)	323
PmaCI	CACGTG	1 cut(s)	452
PmlI	CACGTG	1 cut(s)	452
PpsI	GAGTC	1 cut(s)	323
Ppu21I	YACGTR	2 cut(s)	452, 551
PpuMI	RGGWCCY	1 cut(s)	895
PscI	ACATGT	1 cut(s)	1252
PshBI	ATTAAT	1 cut(s)	737
Psp1406I	AACGTT	1 cut(s)	306
Psp5II	RGGWCCY	1 cut(s)	895
Psp6I	CCWGG	1 cut(s)	1068
PspCI	CACGTG	1 cut(s)	452
PspFI	CCCAGC	1 cut(s)	1280
PspGI	CCWGG	1 cut(s)	1068
PspN4I	GGNNCC	4 cut(s)	862, 863, 897, 1180
PspOMI	GGGCCC	1 cut(s)	861
PspPI	GGNCC	7 cut(s)	4, 211, 511, 662, 861, 862, 895
PspPPI	RGGWCCY	1 cut(s)	895
PstNI	CAGNNNCTG	1 cut(s)	427
PsuI	RGATCY	1 cut(s)	1235
PsyI	GACNNNGTC	1 cut(s)	277
PvuII	CAGCTG	2 cut(s)	797, 1280
RruI	TCGCGA	2 cut(s)	261, 351
RsaI	GTAC	1 cut(s)	1180
RsaNI	GTAC	1 cut(s)	1179
SalI	GTCGAC	1 cut(s)	280
SapI	GCTCTTC	1 cut(s)	531
SaqAI	TTAA	7 cut(s)	270, 411, 533, 737, 791, 1122, 1232
SatI	GCNGC	3 cut(s)	113, 147, 699
Sau3AI	GATC	5 cut(s)	256, 296, 469, 883, 1235
Sau96I	GGNCC	7 cut(s)	4, 211, 511, 662, 861, 862, 895
SchI	GAGTC	1 cut(s)	323
ScrFI	CCNGG	1 cut(s)	1070
SduI	GDGCHC	3 cut(s)	526, 865, 1204
SfaNI	GCATC	3 cut(s)	486, 1014, 1326
SfcI	CTRYAG	1 cut(s)	1113
SgrAI	CRCCGGYG	1 cut(s)	323
SgrDI	CGTCGACG	1 cut(s)	280
SinI	GGWCC	4 cut(s)	211, 511, 662, 895
SmlI	CTYRAG	7 cut(s)	683, 709, 944, 1126, 1142, 1231, 1331
SmoI	CTYRAG	7 cut(s)	683, 709, 944, 1126, 1142, 1231, 1331
Sse9I	AATT	9 cut(s)	408, 490, 535, 555, 842, 1017, 1036, 1160, 1287
SsiI	CCGC	9 cut(s)	110, 113, 144, 147, 198, 214, 276, 514, 773
SspI	AATATT	2 cut(s)	766, 1347
SspMI	CTAG	1 cut(s)	770
StyD4I	CCNGG	1 cut(s)	1068
StyI	CCWWGG	2 cut(s)	834, 1063
TaaI	ACNGT	2 cut(s)	235, 596
TaiI	ACGT	4 cut(s)	309, 317, 454, 553
TaqI	TCGA	3 cut(s)	281, 494, 634
TaqII	GACCGA	1 cut(s)	218
TasI	AATT	9 cut(s)	408, 490, 535, 555, 842, 1017, 1036, 1160, 1287
TauI	GCSGC	2 cut(s)	115, 149
TfiI	GAWTC	5 cut(s)	129, 346, 1055, 1088, 1109
Tru1I	TTAA	7 cut(s)	270, 411, 533, 737, 791, 1122, 1232
Tru9I	TTAA	7 cut(s)	270, 411, 533, 737, 791, 1122, 1232
TscAI	CASTG	1 cut(s)	1200
TseFI	GTSAC	1 cut(s)	326
TseI	GCWGC	1 cut(s)	698
Tsp45I	GTSAC	1 cut(s)	326
TspDTI	ATGAA	6 cut(s)	39, 465, 604, 668, 1241, 1314
TspRI	CASTG	1 cut(s)	1200
Tth111I	GACNNNGTC	1 cut(s)	277
Vha464I	CTTAAG	1 cut(s)	1231
VpaK11BI	GGWCC	4 cut(s)	211, 511, 662, 895
VspI	ATTAAT	1 cut(s)	737
XapI	RAATTY	2 cut(s)	490, 535
XceI	RCATGY	1 cut(s)	1256
XmiI	GTMKAC	2 cut(s)	281, 360
XmnI	GAANNNNTTC	1 cut(s)	1080
XspI	CTAG	1 cut(s)	770
ZraI	GACGTC	1 cut(s)	315

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.