Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0022172

Physical Location & Seq

Genomic Coordinates Forward (+)

68244811 .. 68253963

Gene Structure 9153 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG512200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGAGTCATGGACTCATGGTTATGTATTTGTGGGACATGAGAACTCCCTCCATCGACGGACAAGTTCCCGCCCCCCCGGCCTCCTCCATCTCCCCCACATCCGCCGCCTCCCCCACCCGACCTGCATTTGCCGGCTCCCCCGCCTCAGCTCGTTCCCCAGCCTCCTCCGCCGGCATTTTCGTCTCTCCCACCTCAGCCTTTTCACCCGCCTCCGCAGTTTCCCCAGCTCCGGTGGACGAGATCACAGTGGAGAGTCCTGCATCAACAATCCGGAGCCGACACGGGACCACAGATGACGGCACCCGTGCTATTAGCGCTGCCGTGGCCTCGCTTCTCAAAGCGGGAGAGAAGAGGGTTTCCCCTTCAATCCAGCCCCGCCACAGCAGTCCGACGATGGCGTTGTCCGACGTGGTGAAGATGCTGGCACTTGTGATGATGACTGTTATCCAGATGCTTGCAGCTCCACCTCAGGATCTGTTTTCATCTCCTCATGGGCTGGCGTGCACTTGCACCGGTGTTGGGGAGTCTGAAATTTGTCTGTGCCTTCCGATTCTATTCATCATGTTTCAGGGAGTAATGTCAGCCGCGTATGCGGTGACATTTATGATTCTTGCTAAGATGATCATAGGCACCGATGACTGGGGATTTTTACTCTTTAGTCTCTTTCTCAGCTCAGCTGGCTTCTTTTGGTCCGTGTTCGTGGCCACTCCTTGGCAGTACCGCAGCTTGGTGCTTATGGGAGACGTTGGAGTGATGGTTACAATGTCTCTAGCGATGGTTTTCATCTGGCACAGGAGGCACAATGGGGGGCCAATTCTGACCAATGATGACTCCTGCACGATTTGCCTTATTGATGGGGCTCGAGATGTGGTCTCTGCTGACAGCTATAGGGATAGGAGAATATTAATGAAGCAAGTTGCTGAGGATGCCATTGCAGGGAGGTGTTCAGATGGAACATACTATGTTTCTAGATCATGGTTGCAGCAGTGGCTTAAAAGAAAAATTCTTGATGCTCCATCTGAAGCTGATGCAGGACCAACAGTTTCAATCAGGTGTCCTCATGGACAGCTTTTGCCTGAGCAAGCCCCTGGTGCTAAGAGATTGCTTATTCCAGAGATCCTCTGGCTCTTCATTTATCAAGATGCTTTAACAGTAAAACCTGCTGAGGACCTGGGTTGTTCAACTTTTCTCTCAGACTCTCTACAGTGTTCTGAGTGCAGTGATGAACTATCTGAAGTTGCATGCATGGAGGATTCTTTAAGATTGGTCAGGGAAAAACAGCGCCAGACTCATGATAAATTGGCTGTCGGGAAAAGTATTCCTCTTTCTTTGCATTGCAAGTATTACTTGATACCCTATTCTTGGCTTTCAAAATGGAGAACCTACATCAACGCAGCCGGAAGGAATATTTCTTCAGTAGAGAAACCGGAAACATTATATGGCATTATGGATTTGATCAAGTGTGAAAAGCACTCACGACTTCTAGAAAGGCCTGTTGATCTGGTCTGTAAACGTGGTTTGATTTCACCAAAGTCTTCCCCTGTGGATGGGTTAATATTCATTACTGAGAGTGACTGGAAATCCTTCTGTGAGGAATGGGGTGGTATTGAGGAAAAAGGTGTATCTGCTGAAATCAAGTTAAGTAATACTGAAGGAAATAACTTGGCAGAGTCCTCTGATGATGTGCAAATCTGTGAGGAGGACTTGAGTACTCCAAATCTCGTGAATAGTGAAGTTGATTCTAGATCGCTTGTGATTAGGACTTTCCCTGAGATATGTGAGGACTGCATTGGAGAGAAAGAAAGCAGGGAGCTAATGCGAAAGCTTGAGTACTGCAATGAGGATATATATGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0007275 GO:0008150 GO:0009791 GO:0010154 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUSP UCH

Protein Analysis

618

Amino Acids

67.72

Weight (kDa)

5.18

Isoelectric Point (pI)

63.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0022172)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g30650
rosa_chinensis	RchiOBHm_Chr6g0312311
rosa_samantha	Rh6AG512200 Rh6AG514500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	130, 1168
AccB1I	GGYRCC	2 cut(s)	299, 629
AccB7I	CCANNNNNTGG	1 cut(s)	711
AccII	CGCG	1 cut(s)	587
AccIII	TCCGGA	1 cut(s)	270
AclWI	GGATC	2 cut(s)	480, 1111
AcoI	YGGCCR	1 cut(s)	702
AcsI	RAATTY	2 cut(s)	531, 1002
AcuI	CTGAAG	4 cut(s)	1041, 1254, 1398, 1671
AfaI	GTAC	3 cut(s)	719, 1711, 1832
AfeI	AGCGCT	1 cut(s)	316
AfiI	CCNNNNNNNGG	8 cut(s)	229, 519, 639, 711, 727, 936, 1362, 1547
AgeI	ACCGGT	1 cut(s)	512
AgsI	TTSAA	4 cut(s)	366, 1047, 1182, 1371
AjiI	CACGTC	1 cut(s)	409
AjnI	CCWGG	2 cut(s)	1087, 1170
Alw21I	GWGCWC	1 cut(s)	506
Alw26I	GTCTC	5 cut(s)	187, 665, 735, 771, 877
Alw44I	GTGCAC	1 cut(s)	502
AlwI	GGATC	2 cut(s)	480, 1111
AlwNI	CAGNNNCTG	1 cut(s)	475
Ama87I	CYCGRG	1 cut(s)	861
Aor13HI	TCCGGA	1 cut(s)	270
Aor51HI	AGCGCT	1 cut(s)	316
AoxI	GGCC	5 cut(s)	78, 324, 702, 809, 1490
ApaLI	GTGCAC	1 cut(s)	502
ApeKI	GCWGC	5 cut(s)	317, 458, 723, 982, 1394
ApoI	RAATTY	2 cut(s)	531, 1002
AseI	ATTAAT	1 cut(s)	905
AsiGI	ACCGGT	1 cut(s)	512
Asp700I	GAANNNNTTC	1 cut(s)	1583
AspLEI	GCGC	2 cut(s)	317, 1284
AspS9I	GGNCC	5 cut(s)	285, 690, 809, 1034, 1168
AsuC2I	CCSGG	1 cut(s)	77
AsuHPI	GGTGA	4 cut(s)	195, 424, 607, 1518
AvaI	CYCGRG	1 cut(s)	861
AvaII	GGWCC	4 cut(s)	285, 690, 1034, 1168
AxyI	CCTNAGG	1 cut(s)	468
BaeGI	GKGCMC	1 cut(s)	506
BalI	TGGCCA	1 cut(s)	704
BanI	GGYRCC	2 cut(s)	299, 629
BanII	GRGCYC	1 cut(s)	862
BauI	CACGAG	1 cut(s)	1721
BbsI	GAAGAC	1 cut(s)	1527
Bbv12I	GWGCWC	1 cut(s)	506
BbvCI	CCTCAGC	4 cut(s)	145, 193, 921, 1164
BbvI	GCAGC	5 cut(s)	304, 470, 735, 994, 1406
BccI	CCATC	9 cut(s)	59, 95, 388, 748, 769, 848, 944, 1024, 1541
BceAI	ACGGC	2 cut(s)	305, 313
BciT130I	CCWGG	2 cut(s)	1089, 1172
BclI	TGATCA	2 cut(s)	621, 1455
BcnI	CCSGG	1 cut(s)	77
BcoDI	GTCTC	5 cut(s)	187, 665, 735, 771, 877
BfaI	CTAG	4 cut(s)	770, 969, 1484, 1743
BfmI	CTRYAG	2 cut(s)	886, 1202
BfoI	RGCGCY	2 cut(s)	318, 1285
BfuAI	ACCTGC	2 cut(s)	130, 1168
BglI	GCCNNNNNGGC	1 cut(s)	77
BisI	GCNGC	7 cut(s)	105, 318, 459, 585, 724, 983, 1395
BlpI	GCTNAGC	1 cut(s)	673
BlsI	GCNGC	7 cut(s)	106, 319, 460, 586, 725, 984, 1396
BmcAI	AGTACT	2 cut(s)	1711, 1832
Bme1390I	CCNGG	3 cut(s)	77, 1089, 1172
Bme18I	GGWCC	4 cut(s)	285, 690, 1034, 1168
BmeT110I	CYCGRG	1 cut(s)	861
BmgBI	CACGTC	1 cut(s)	409
BmgT120I	GGNCC	5 cut(s)	285, 690, 809, 1034, 1168
BmiI	GGNNCC	6 cut(s)	136, 275, 286, 301, 631, 810
BmrFI	CCNGG	3 cut(s)	77, 1089, 1172
BmrI	ACTGGG	1 cut(s)	649
BmsI	GCATC	7 cut(s)	269, 408, 441, 916, 1000, 1018, 1132
BmuI	ACTGGG	1 cut(s)	649
BpiI	GAAGAC	1 cut(s)	1527
Bpu10I	CCTNAGC	5 cut(s)	145, 193, 921, 1077, 1164
Bpu1102I	GCTNAGC	1 cut(s)	673
BpuEI	CTTGAG	2 cut(s)	1726, 1847
BpuMI	CCSGG	1 cut(s)	77
BsaI	GGTCTC	1 cut(s)	877
BsaJI	CCNNGG	5 cut(s)	75, 321, 710, 1087, 1171
BsaWI	WCCGGW	4 cut(s)	229, 270, 512, 1426
BsaXI	ACNNNNNCTCC	2 cut(s)	741, 771
Bsc4I	CCNNNNNNNGG	8 cut(s)	229, 519, 639, 711, 727, 936, 1362, 1547
Bse118I	RCCGGY	3 cut(s)	131, 170, 512
Bse1I	ACTGG	2 cut(s)	644, 1580
Bse21I	CCTNAGG	1 cut(s)	468
Bse3DI	GCAATG	3 cut(s)	930, 1333, 1843
BseAI	TCCGGA	1 cut(s)	270
BseBI	CCWGG	2 cut(s)	1089, 1172
BseDI	CCNNGG	5 cut(s)	75, 321, 710, 1087, 1171
BseGI	GGATG	3 cut(s)	98, 931, 1552
BseLI	CCNNNNNNNGG	8 cut(s)	229, 519, 639, 711, 727, 936, 1362, 1547
BseMI	GCAATG	3 cut(s)	930, 1333, 1843
BseNI	ACTGG	2 cut(s)	644, 1580
BseRI	GAGGAG	4 cut(s)	73, 154, 477, 1712
BseSI	GKGCMC	1 cut(s)	506
BseXI	GCAGC	5 cut(s)	304, 470, 735, 994, 1406
BseYI	CCCAGC	2 cut(s)	157, 223
BsgI	GTGCAG	2 cut(s)	820, 1237
Bsh1236I	CGCG	1 cut(s)	587
BshFI	GGCC	5 cut(s)	80, 326, 704, 811, 1492
BshNI	GGYRCC	2 cut(s)	299, 629
BshTI	ACCGGT	1 cut(s)	512
BsiHKAI	GWGCWC	1 cut(s)	506
BsiHKCI	CYCGRG	1 cut(s)	861
BsiSI	CCGG	8 cut(s)	77, 132, 171, 230, 271, 513, 1398, 1427
BslFI	GGGAC	2 cut(s)	47, 298
BslI	CCNNNNNNNGG	8 cut(s)	229, 519, 639, 711, 727, 936, 1362, 1547
BsmAI	GTCTC	5 cut(s)	187, 665, 735, 771, 877
BsmBI	CGTCTC	2 cut(s)	187, 735
BsmFI	GGGAC	2 cut(s)	47, 298
BsnI	GGCC	5 cut(s)	80, 326, 704, 811, 1492
Bso31I	GGTCTC	1 cut(s)	877
BsoBI	CYCGRG	1 cut(s)	861
Bsp1286I	GDGCHC	2 cut(s)	506, 862
Bsp13I	TCCGGA	1 cut(s)	270
Bsp143I	GATC	8 cut(s)	240, 472, 621, 971, 1116, 1455, 1498, 1745
Bsp1720I	GCTNAGC	1 cut(s)	673
BspANI	GGCC	5 cut(s)	80, 326, 704, 811, 1492
BspEI	TCCGGA	1 cut(s)	270
BspFNI	CGCG	1 cut(s)	587
BspHI	TCATGA	1 cut(s)	1291
BspLI	GGNNCC	6 cut(s)	136, 275, 286, 301, 631, 810
BspMI	ACCTGC	2 cut(s)	130, 1168
BspPI	GGATC	2 cut(s)	480, 1111
BspQI	GCTCTTC	1 cut(s)	1133
BspT107I	GGYRCC	2 cut(s)	299, 629
BspTNI	GGTCTC	1 cut(s)	877
BsrDI	GCAATG	3 cut(s)	930, 1333, 1843
BsrFI	RCCGGY	3 cut(s)	131, 170, 512
BsrI	ACTGG	2 cut(s)	644, 1580
BssAI	RCCGGY	3 cut(s)	131, 170, 512
BssECI	CCNNGG	5 cut(s)	75, 321, 710, 1087, 1171
BssMI	GATC	8 cut(s)	240, 472, 621, 971, 1116, 1455, 1498, 1745
BssSI	CACGAG	1 cut(s)	1721
BssT1I	CCWWGG	1 cut(s)	710
Bst2BI	CACGAG	1 cut(s)	1721
Bst2UI	CCWGG	2 cut(s)	1089, 1172
Bst4CI	ACNGT	5 cut(s)	247, 442, 1042, 1153, 1206
Bst6I	CTCTTC	2 cut(s)	344, 1133
BstAPI	GCANNNNNTGC	1 cut(s)	843
BstC8I	GCNNGC	9 cut(s)	133, 172, 423, 456, 498, 502, 679, 1083, 1243
BstDSI	CCRYGG	1 cut(s)	321
BstF5I	GGATG	3 cut(s)	98, 931, 1552
BstFNI	CGCG	1 cut(s)	587
BstH2I	RGCGCY	2 cut(s)	318, 1285
BstHHI	GCGC	2 cut(s)	317, 1284
BstKTI	GATC	8 cut(s)	243, 475, 624, 974, 1119, 1458, 1501, 1748
BstMAI	GTCTC	5 cut(s)	187, 665, 735, 771, 877
BstMBI	GATC	8 cut(s)	240, 472, 621, 971, 1116, 1455, 1498, 1745
BstNI	CCWGG	2 cut(s)	1089, 1172
BstNSI	RCATGY	1 cut(s)	1245
BstSCI	CCNGG	3 cut(s)	75, 1087, 1170
BstSFI	CTRYAG	2 cut(s)	886, 1202
BstSLI	GKGCMC	1 cut(s)	506
BstUI	CGCG	1 cut(s)	587
BstV1I	GCAGC	5 cut(s)	304, 470, 735, 994, 1406
BstV2I	GAAGAC	1 cut(s)	1527
BstX2I	RGATCY	2 cut(s)	472, 1116
BstYI	RGATCY	2 cut(s)	472, 1116
Bsu36I	CCTNAGG	1 cut(s)	468
BsuRI	GGCC	5 cut(s)	80, 326, 704, 811, 1492
BtgI	CCRYGG	1 cut(s)	321
BtgZI	GCGATG	1 cut(s)	788
BtrI	CACGTC	1 cut(s)	409
BtsCI	GGATG	3 cut(s)	98, 931, 1552
BtsI	GCAGTG	2 cut(s)	992, 1225
BtsIMutI	CAGTG	4 cut(s)	252, 992, 1211, 1225
BveI	ACCTGC	2 cut(s)	130, 1168
Cac8I	GCNNGC	9 cut(s)	133, 172, 423, 456, 498, 502, 679, 1083, 1243
CaiI	CAGNNNCTG	1 cut(s)	475
CciI	TCATGA	1 cut(s)	1291
CfoI	GCGC	2 cut(s)	317, 1284
Cfr10I	RCCGGY	3 cut(s)	131, 170, 512
Cfr13I	GGNCC	5 cut(s)	285, 690, 809, 1034, 1168
Csp6I	GTAC	3 cut(s)	718, 1710, 1831
CspAI	ACCGGT	1 cut(s)	512
CviQI	GTAC	3 cut(s)	718, 1710, 1831
DpnI	GATC	8 cut(s)	242, 474, 623, 973, 1118, 1457, 1500, 1747
DpnII	GATC	8 cut(s)	240, 472, 621, 971, 1116, 1455, 1498, 1745
EaeI	YGGCCR	1 cut(s)	702
Eam1104I	CTCTTC	2 cut(s)	344, 1133
EarI	CTCTTC	2 cut(s)	344, 1133
EciI	GGCGGA	2 cut(s)	91, 157
Eco130I	CCWWGG	1 cut(s)	710
Eco147I	AGGCCT	1 cut(s)	1492
Eco24I	GRGCYC	1 cut(s)	862
Eco31I	GGTCTC	1 cut(s)	877
Eco47I	GGWCC	4 cut(s)	285, 690, 1034, 1168
Eco47III	AGCGCT	1 cut(s)	316
Eco57I	CTGAAG	4 cut(s)	1041, 1254, 1398, 1671
Eco81I	CCTNAGG	1 cut(s)	468
Eco88I	CYCGRG	1 cut(s)	861
EcoO109I	RGGNCCY	1 cut(s)	1168
EcoRII	CCWGG	2 cut(s)	1087, 1170
EcoT14I	CCWWGG	1 cut(s)	710
EcoT22I	ATGCAT	1 cut(s)	1247
EcoT38I	GRGCYC	1 cut(s)	862
ErhI	CCWWGG	1 cut(s)	710
Esp3I	CGTCTC	2 cut(s)	187, 735
FalI	AAGNNNNNCTT	2 cut(s)	1331, 1363
FaqI	GGGAC	2 cut(s)	47, 298
FauI	CCCGC	5 cut(s)	76, 148, 214, 334, 383
FbaI	TGATCA	2 cut(s)	621, 1455
Fnu4HI	GCNGC	7 cut(s)	105, 318, 459, 585, 724, 983, 1395
FokI	GGATG	3 cut(s)	85, 938, 1559
FriOI	GRGCYC	1 cut(s)	862
Fsp4HI	GCNGC	7 cut(s)	105, 318, 459, 585, 724, 983, 1395
FspBI	CTAG	4 cut(s)	770, 969, 1484, 1743
GlaI	GCGC	2 cut(s)	316, 1283
GluI	GCNGC	7 cut(s)	105, 318, 459, 585, 724, 983, 1395
GsaI	CCCAGC	2 cut(s)	161, 227
HaeII	RGCGCY	2 cut(s)	318, 1285
HaeIII	GGCC	5 cut(s)	80, 326, 704, 811, 1492
HapII	CCGG	8 cut(s)	77, 132, 171, 230, 271, 513, 1398, 1427
HhaI	GCGC	2 cut(s)	317, 1284
Hin6I	GCGC	2 cut(s)	315, 1282
HinP1I	GCGC	2 cut(s)	315, 1282
HindIII	AAGCTT	1 cut(s)	1823
HpaII	CCGG	8 cut(s)	77, 132, 171, 230, 271, 513, 1398, 1427
HphI	GGTGA	4 cut(s)	195, 424, 607, 1518
Hpy166II	GTNNAC	3 cut(s)	235, 504, 1511
Hpy8I	GTNNAC	3 cut(s)	235, 504, 1511
Hpy99I	CGWCG	3 cut(s)	59, 394, 410
HpyAV	CCTTC	5 cut(s)	372, 554, 1395, 1594, 1646
HpyCH4III	ACNGT	5 cut(s)	247, 442, 1042, 1153, 1206
HpyCH4IV	ACGT	3 cut(s)	408, 744, 1513
HpySE526I	ACGT	3 cut(s)	408, 744, 1513
HspAI	GCGC	2 cut(s)	315, 1282
Kpn2I	TCCGGA	1 cut(s)	270
KroI	GCCGGC	2 cut(s)	131, 170
KroNI	GCCGGC	2 cut(s)	133, 172
Ksp22I	TGATCA	2 cut(s)	621, 1455
Kzo9I	GATC	8 cut(s)	240, 472, 621, 971, 1116, 1455, 1498, 1745
LguI	GCTCTTC	1 cut(s)	1133
LmnI	GCTCC	6 cut(s)	140, 232, 273, 466, 1018, 1810
Lsp1109I	GCAGC	5 cut(s)	304, 470, 735, 994, 1406
LweI	GCATC	7 cut(s)	269, 408, 441, 916, 1000, 1018, 1132
MaeI	CTAG	4 cut(s)	770, 969, 1484, 1743
MaeII	ACGT	3 cut(s)	408, 744, 1513
MaeIII	GTNAC	3 cut(s)	595, 757, 1571
MalI	GATC	8 cut(s)	242, 474, 623, 973, 1118, 1457, 1500, 1747
MboI	GATC	8 cut(s)	240, 472, 621, 971, 1116, 1455, 1498, 1745
MboII	GAAGA	5 cut(s)	361, 427, 1120, 1404, 1527
MflI	RGATCY	2 cut(s)	472, 1116
MhlI	GDGCHC	2 cut(s)	506, 862
MlsI	TGGCCA	1 cut(s)	704
MluCI	AATT	4 cut(s)	531, 813, 1002, 1298
MluNI	TGGCCA	1 cut(s)	704
MlyI	GAGTC	8 cut(s)	6, 13, 262, 533, 824, 1190, 1282, 1679
MmeI	TCCRAC	3 cut(s)	413, 429, 727
Mox20I	TGGCCA	1 cut(s)	704
Mph1103I	ATGCAT	1 cut(s)	1247
MroI	TCCGGA	1 cut(s)	270
MroNI	GCCGGC	2 cut(s)	131, 170
MroXI	GAANNNNTTC	1 cut(s)	1583
MscI	TGGCCA	1 cut(s)	704
MseI	TTAA	6 cut(s)	905, 993, 1148, 1259, 1553, 1640
MslI	CAYNNNNRTG	1 cut(s)	20
Msp20I	TGGCCA	1 cut(s)	704
MspA1I	CMGCKG	1 cut(s)	677
MspI	CCGG	8 cut(s)	77, 132, 171, 230, 271, 513, 1398, 1427
MspR9I	CCNGG	3 cut(s)	77, 1089, 1172
MvaI	CCWGG	2 cut(s)	1089, 1172
MvnI	CGCG	1 cut(s)	587
NaeI	GCCGGC	2 cut(s)	133, 172
NciI	CCSGG	1 cut(s)	77
NdeII	GATC	8 cut(s)	240, 472, 621, 971, 1116, 1455, 1498, 1745
NgoMIV	GCCGGC	2 cut(s)	131, 170
NlaIV	GGNNCC	6 cut(s)	136, 275, 286, 301, 631, 810
NmuCI	GTSAC	2 cut(s)	595, 1571
NsiI	ATGCAT	1 cut(s)	1247
NspI	RCATGY	1 cut(s)	1245
PaeI	GCATGC	1 cut(s)	1245
PaeR7I	CTCGAG	1 cut(s)	861
PagI	TCATGA	1 cut(s)	1291
PceI	AGGCCT	1 cut(s)	1492
PciSI	GCTCTTC	1 cut(s)	1133
PdiI	GCCGGC	2 cut(s)	133, 172
PdmI	GAANNNNTTC	1 cut(s)	1583
PfeI	GAWTC	4 cut(s)	550, 607, 1253, 1739
PflMI	CCANNNNNTGG	1 cut(s)	711
PinAI	ACCGGT	1 cut(s)	512
PkrI	GCNGC	7 cut(s)	106, 319, 460, 586, 725, 984, 1396
PleI	GAGTC	8 cut(s)	6, 12, 261, 532, 824, 1190, 1282, 1678
PpsI	GAGTC	8 cut(s)	6, 12, 261, 532, 824, 1190, 1282, 1678
PpuMI	RGGWCCY	1 cut(s)	1168
PshBI	ATTAAT	1 cut(s)	905
Psp5II	RGGWCCY	1 cut(s)	1168
Psp6I	CCWGG	2 cut(s)	1087, 1170
PspFI	CCCAGC	2 cut(s)	157, 223
PspGI	CCWGG	2 cut(s)	1087, 1170
PspN4I	GGNNCC	6 cut(s)	136, 275, 286, 301, 631, 810
PspPI	GGNCC	5 cut(s)	285, 690, 809, 1034, 1168
PspPPI	RGGWCCY	1 cut(s)	1168
PstNI	CAGNNNCTG	1 cut(s)	475
PsuI	RGATCY	2 cut(s)	472, 1116
PvuII	CAGCTG	1 cut(s)	677
RsaI	GTAC	3 cut(s)	719, 1711, 1832
RsaNI	GTAC	3 cut(s)	718, 1710, 1831
RseI	CAYNNNNRTG	1 cut(s)	20
SapI	GCTCTTC	1 cut(s)	1133
SaqAI	TTAA	6 cut(s)	905, 993, 1148, 1259, 1553, 1640
SatI	GCNGC	7 cut(s)	105, 318, 459, 585, 724, 983, 1395
Sau3AI	GATC	8 cut(s)	240, 472, 621, 971, 1116, 1455, 1498, 1745
Sau96I	GGNCC	5 cut(s)	285, 690, 809, 1034, 1168
ScaI	AGTACT	2 cut(s)	1711, 1832
SchI	GAGTC	8 cut(s)	6, 13, 262, 533, 824, 1190, 1282, 1679
ScrFI	CCNGG	3 cut(s)	77, 1089, 1172
SduI	GDGCHC	2 cut(s)	506, 862
SfaNI	GCATC	7 cut(s)	269, 408, 441, 916, 1000, 1018, 1132
SfcI	CTRYAG	2 cut(s)	886, 1202
Sfr274I	CTCGAG	1 cut(s)	861
SgrAI	CRCCGGYG	1 cut(s)	512
SinI	GGWCC	4 cut(s)	285, 690, 1034, 1168
SlaI	CTCGAG	1 cut(s)	861
SmiMI	CAYNNNNRTG	1 cut(s)	20
SmlI	CTYRAG	3 cut(s)	861, 1705, 1826
SmoI	CTYRAG	3 cut(s)	861, 1705, 1826
SphI	GCATGC	1 cut(s)	1245
Sse9I	AATT	4 cut(s)	531, 813, 1002, 1298
SseBI	AGGCCT	1 cut(s)	1492
SspI	AATATT	3 cut(s)	903, 1408, 1557
SspMI	CTAG	4 cut(s)	770, 969, 1484, 1743
StuI	AGGCCT	1 cut(s)	1492
StyD4I	CCNGG	3 cut(s)	75, 1087, 1170
StyI	CCWWGG	1 cut(s)	710
TaaI	ACNGT	5 cut(s)	247, 442, 1042, 1153, 1206
TaiI	ACGT	3 cut(s)	411, 747, 1516
TaqI	TCGA	2 cut(s)	54, 862
TasI	AATT	4 cut(s)	531, 813, 1002, 1298
TatI	WGTACW	2 cut(s)	1709, 1830
TauI	GCSGC	2 cut(s)	107, 587
TfiI	GAWTC	4 cut(s)	550, 607, 1253, 1739
Tru1I	TTAA	6 cut(s)	905, 993, 1148, 1259, 1553, 1640
Tru9I	TTAA	6 cut(s)	905, 993, 1148, 1259, 1553, 1640
TscAI	CASTG	4 cut(s)	252, 992, 1211, 1225
TseFI	GTSAC	2 cut(s)	595, 1571
TseI	GCWGC	5 cut(s)	317, 458, 723, 982, 1394
Tsp45I	GTSAC	2 cut(s)	595, 1571
TspDTI	ATGAA	7 cut(s)	471, 547, 772, 923, 1120, 1239, 1549
TspGWI	ACGGA	2 cut(s)	72, 682
TspRI	CASTG	4 cut(s)	252, 992, 1211, 1225
Van91I	CCANNNNNTGG	1 cut(s)	711
VneI	GTGCAC	1 cut(s)	502
VpaK11BI	GGWCC	4 cut(s)	285, 690, 1034, 1168
VspI	ATTAAT	1 cut(s)	905
XapI	RAATTY	2 cut(s)	531, 1002
XbaI	TCTAGA	3 cut(s)	968, 1483, 1742
XceI	RCATGY	1 cut(s)	1245
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1119
XhoI	CTCGAG	1 cut(s)	861
XmnI	GAANNNNTTC	1 cut(s)	1583
XspI	CTAG	4 cut(s)	770, 969, 1484, 1743
ZrmI	AGTACT	2 cut(s)	1711, 1832
Zsp2I	ATGCAT	1 cut(s)	1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.