Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0010285

Physical Location & Seq

Genomic Coordinates Reverse (-)

23695732 .. 23702992

Gene Structure 7261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g30650.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3258 bp

ATGAGCCAGCCAAGTACTCGGAGTAAAAACAAACGAAATAAGCAAGGGGATAACGGTGACACTACTTCGGAGATATTGAGGAAAATTCATGCCACGAATGAAATAACAAAGGAGGATATAGATACATTGTATAAAGTTAAGAAGCCGGTTTGTCAGGGGTGTCGTGTGAATACTAAGGACAACCCGAATTGCTTTTGTGGGCTTGTTCCGCCTCTCAAAGGCAGTAGGAAATCTGGCCTGTGGCAGAAGACATCAGAGATTCTGCAAAACCTTGGCCCGGACCCTTCTGAGGATCTTCGTTCTTCTGATGACTGTCCTGCAGGCCTCACAAATCTCGGGGCTACGTGTTACGCTAACAGCATCCTCCAGTGTCTGTATATGAACAAGCCCTTCCGTGAAGGTATCTTTATGGTTGAACCTGAAGTCCTGGAAAAACAACCGGTCTTGAATCAACTTTCACGGCTTTTTGCACAGTTGTATCTCAGCAAAAGAGCATTCATTGACTCATCTCCATTTGTCAAAACTCTGGAGTTGGATAATGGAGTTCAACAAGATAGTCATGAGTTTCTGACCTTATTGCTGTCATTGCTGGAGCGTTGTCTCAGCCACTCAAAAACTTTGAGGGCAAAAGCTATTGTTCAAGATCTTTTTCGTGGAAGTGTGTCACATGTTACAAGGTGCTCAAAATGTGGAAAAAACTCTGAAGCTTCTTCAAACATGGAAGACTTTTATGAATTGGAGTTGAATGTGAAGGGTTTGAAAAGTTTGGATGAAAGTTTAGATGATTACCTCAGTGTTGAAGAGCTTAAGGGAGACAATCAATATTTCTGCGAGTCGTGTAAAACAAGAGTTGATGCTACTCGAAGCATCAAGTTGCATACATTGCCTCCTGTTCTCAATTTTCAGCTTAAGCGATATGTTTTCCTTCCGAAGACGACAACAAGGAAGAAGATTACATCTGCATTTATGTTTCCTGGGGTACTTGATATGAGGCAGAGGCTATCTGAGCCTACTCAGACTGAATCAATATATGACTTGTCAGCTGTGCTGATTCACAAAGGAACTGCAGTTAACAGTGGCCACTATGTAGCCCATATCAAGGATGAGAAGACAGGGCAATGGTGGGAATTCGACGATGAACGTGTCTCAGACTTGGGGACTCACCCGTTTGGAGAAGGGACTTCTAGTTCCAATAGCAGACCTGTTAATCATGAACCAGTTAATCCATCTTTCTCAGAACAGATGAACGGTGTTTCTAATGGTGATAGTATGGATATTGATCACCAACAACCTTCAGAATCTATTACTAGGTGTGATGTGGAGACATTTTCATCATGTGATGCGTATATGCTGATGTATAATCTCAGGCGCTCCTGCAAGGATGATGGGAAAACCCATGTTGAATGTAATGGCAACAACAGGAAGATAGAAGATGATAGTGTTTCTGGTTCTCTTCCTTATAATCTTTTTGACGAGATCAAAAGCAGTAATGCTTTGTATCTTGATTCTTGCCAACAATACACATTGAAGAAGGAAGAAGAAATGAATCGTATCAATGAACGAAGACAGGAAGTGCGCTCGATTTTGTCTGAAGCTCCTGTTCGATCACTCGAGGAACCTTTTTGTTGGGTTTCGACAGATTGGCTTCGTCAGTGGGCTGACAATATTACTCCACCTATTCTTGACAATACCTCCATCCAATGTGTGCATGGAAAAGTTCCAGCATCAAAGGTTGGCTGCATGAAGCGGTTGTCAGCTGAAGCTTGGACCAAGTTGATCTCTATGCACAATGGGGGGCCAATCCTGACCAATGATGACTCCTGCACGATTTGCCTTAATGATGGGGCTCGAGATGTGGTCTCTGCCGACAGCTATAGGGATAGGAGGATATTAATGAAGCAAGTTGCTGAGGATGCCATTGCAGGGCGATGTTCAGATGGAACATACTATGTTTCTAGATCATGGTTGCAGCAGTGGCTTAAAAGGAAAATTCTTGATGCTCCATCTGAAGCAGATGCAGGACCAACAGTTTCAATCAGGTGTCCTCATGGGCAGCTTTTGCCAGAGCAAGCCAGTGGTGCTAAGAGAGTGCTTATTCCTGAGGTTCTCTGGCTCTTCCTTTATGAAGATGCTTTAACAGTAAAACCTGCTGAGGACCTGGGTTGTTCGACTTTTCTCTCAGACTCTCTTCAGTGTTCTGAGTGCAATGATGAATTATCTGAAGTTGCATGCATGGAGGATTCTTTAAGATTGGTTAGGGAAAAACAGCGCCAGACTCATGATAAATTAGCTGCCGGGAAAAGTATTCCTCTTTCTCTGCATTGCAAGTATTACTTGATACCCTATTCTTGGCTTACAAAATGGAGGACCTACATTAATGCAACCGCAAGGAATATTTCTTCAATAGAGAAACCGGAAACACTAGATGGCATCATGGATTTGATTAAATGTGAAAAGCATGCACGACTTCTAGAAAGGCCTGTTGATCTGGTCTGTAAACGTGGTTTGATTTCGCAAAAGTCTACTCCTGTGGATGGGTTAATATTCATCACTGAGAGTGACTGGAAATCCTTCTGTGAGGAATGGGGTTGTATTGAGGAGAAAGGTGTATCTGCTGAAATCAAGTTAAGCAATACTGAAGGAAATAACTTGACAGGGTCCTGTGATGATATGCAAATCTGTGAGGACCTGCGCAATTCAAATCTCATGAATAGTGAAATTGATTCCAGATCCCTTGTTATTAGGACTTGCCCTGAGATATGTGAGGATTGCATTGGAGAGAAAGAGAGCAGGGAGCTGATGCGGAAACTGGAGTACTGCAACGAGGACATATATGTATACTTGGTACATGGCAAGGAAGCTCCAAAATATATTTTACAAGCATCTGAGACTAGTTTTGATCCGGATCGCCGAGTTTCCAAGCGCTCTCGAAAGACAAACACTGGAGATCAAATAAGTTTGAACGTCTCTGGTTCTACGTCTATATACCAGTTAAAAATGATGATATGGGAATCTTTTGGGGTTGTTAAGGAAAACCAGATACTTCACAAAGGCACTCGAACAATTGATAGTGAATGTGCTACACTGGCAGATTTGAACATATTCCCTGGGGATAAGCTTTGGGTGACTGATTCAGAAGTCCATGAGAACCGAGATATCGCTGATGAGCTTTCTGACCAGAAAATGGATGTTCAACACACTGAAGAGGGTTTTCGAGGGACACTTTTGACGGCAAATGTCTCATCCCAAGTTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0007275 GO:0008150 GO:0009791 GO:0010154 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUSP UCH

Protein Analysis

1086

Amino Acids

122.51

Weight (kDa)

5.43

Isoelectric Point (pI)

55.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUSP	PF06337	15 - 78	5.5e-06	DUSP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49600 AT3G49600 AT3G49600
fragaria_vesca	FvH4_2g30650 FvH4_2g30650 FvH4_2g30650 FvH4_2g30650
malus_domestica	MD08G1133600.v1.1 MD15G1110500.v1.1
prunus_persica	Prupe.1G462800_v2.0.a1
pyrus_communis	pycom08g11240 pycom15g10080
rosa_chinensis	RchiOBHm_Chr6g0312261
rosa_laevigata	RLG00000010338
rosa_roxburghii	Rroxscaffold_7G00156900
rosa_rugosa	Rorug06G0394400
rosa_samantha	Rh6AG511600 Rh6BG522700 Rh6CG528400 Rh6DG513800
rosa_wichuraiana	Rw6G044500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1461
Acc16I	TGCGCA	1 cut(s)	2693
Acc36I	ACCTGC	2 cut(s)	2155, 2697
AccB7I	CCANNNNNTGG	1 cut(s)	3184
AccI	GTMKAC	2 cut(s)	2522, 2838
AccIII	TCCGGA	1 cut(s)	2902
AciI	CCGC	4 cut(s)	209, 1747, 2385, 2803
AclWI	GGATC	4 cut(s)	300, 2724, 2894, 2913
AcoI	YGGCCR	1 cut(s)	1078
AcsI	RAATTY	3 cut(s)	84, 1127, 1989
AfaI	GTAC	4 cut(s)	16, 981, 2816, 2847
AfeI	AGCGCT	1 cut(s)	2924
AfiI	CCNNNNNNNGG	8 cut(s)	218, 277, 289, 1099, 1923, 2349, 2534, 3184
AflII	CTTAAG	2 cut(s)	806, 908
AflIII	ACRYGT	3 cut(s)	344, 667, 1141
AgeI	ACCGGT	1 cut(s)	439
AhlI	ACTAGT	1 cut(s)	2891
AjnI	CCWGG	4 cut(s)	426, 973, 2157, 3106
AloI	GAACNNNNNNTCC	4 cut(s)	408, 440, 1171, 1203
Alw21I	GWGCWC	1 cut(s)	683
Alw26I	GTCTC	8 cut(s)	605, 807, 1150, 1316, 1864, 2882, 2971, 3244
AlwI	GGATC	4 cut(s)	300, 2724, 2894, 2913
AlwNI	CAGNNNCTG	1 cut(s)	373
Ama87I	CYCGRG	3 cut(s)	335, 1610, 1848
Aor13HI	TCCGGA	1 cut(s)	2902
Aor51HI	AGCGCT	1 cut(s)	2924
AoxI	GGCC	6 cut(s)	235, 274, 322, 1078, 1796, 2477
ApeKI	GCWGC	4 cut(s)	1737, 1969, 2053, 2291
ApoI	RAATTY	3 cut(s)	84, 1127, 1989
AseI	ATTAAT	2 cut(s)	1892, 2376
AsiGI	ACCGGT	1 cut(s)	439
Asp700I	GAANNNNTTC	2 cut(s)	2570, 3101
AspLEI	GCGC	5 cut(s)	1371, 1578, 2271, 2694, 2925
AspS9I	GGNCC	9 cut(s)	275, 280, 1767, 1796, 2021, 2155, 2367, 2658, 2686
AsuC2I	CCSGG	2 cut(s)	278, 2296
AsuHPI	GGTGA	5 cut(s)	68, 1154, 1274, 1274, 3136
AvaI	CYCGRG	3 cut(s)	335, 1610, 1848
AvaII	GGWCC	7 cut(s)	280, 1767, 2021, 2155, 2367, 2658, 2686
AxyI	CCTNAGG	1 cut(s)	2100
BaeI	ACNNNNGTAYC	2 cut(s)	461, 494
BalI	TGGCCA	1 cut(s)	1080
BanII	GRGCYC	1 cut(s)	1849
BbsI	GAAGAC	5 cut(s)	254, 729, 938, 1115, 1570
Bbv12I	GWGCWC	1 cut(s)	683
BbvCI	CCTCAGC	2 cut(s)	1908, 2151
BbvI	GCAGC	4 cut(s)	1724, 1981, 2065, 2278
BccI	CCATC	8 cut(s)	1234, 1379, 1703, 1835, 1931, 2011, 2420, 2528
BceAI	ACGGC	2 cut(s)	476, 3246
BciT130I	CCWGG	4 cut(s)	428, 975, 2159, 3108
BclI	TGATCA	1 cut(s)	1279
BcnI	CCSGG	2 cut(s)	278, 2296
BcoDI	GTCTC	8 cut(s)	605, 807, 1150, 1316, 1864, 2882, 2971, 3244
BcuI	ACTAGT	1 cut(s)	2891
BfaI	CTAG	6 cut(s)	1185, 1308, 1956, 2423, 2471, 2892
BfmI	CTRYAG	3 cut(s)	318, 1065, 1873
BfoI	RGCGCY	3 cut(s)	1372, 2272, 2926
BfrI	CTTAAG	2 cut(s)	806, 908
BfuAI	ACCTGC	2 cut(s)	2155, 2697
BglII	AGATCT	1 cut(s)	643
BisI	GCNGC	4 cut(s)	1738, 1970, 2054, 2292
BlsI	GCNGC	4 cut(s)	1739, 1971, 2055, 2293
BmcAI	AGTACT	2 cut(s)	16, 2816
Bme1390I	CCNGG	6 cut(s)	278, 428, 975, 2159, 2296, 3108
Bme18I	GGWCC	7 cut(s)	280, 1767, 2021, 2155, 2367, 2658, 2686
BmeT110I	CYCGRG	3 cut(s)	335, 1610, 1848
BmgT120I	GGNCC	9 cut(s)	275, 280, 1767, 1796, 2021, 2155, 2367, 2658, 2686
BmiI	GGNNCC	4 cut(s)	282, 1617, 1797, 2659
BmrFI	CCNGG	6 cut(s)	278, 428, 975, 2159, 2296, 3108
BpiI	GAAGAC	5 cut(s)	254, 729, 938, 1115, 1570
BpmI	CTGGAG	5 cut(s)	350, 548, 611, 2831, 2964
Bpu10I	CCTNAGC	2 cut(s)	1908, 2151
BpuMI	CCSGG	2 cut(s)	278, 2296
BsaAI	YACGTR	1 cut(s)	345
BsaBI	GATNNNNATC	2 cut(s)	1278, 2904
BsaI	GGTCTC	1 cut(s)	1864
BsaJI	CCNNGG	5 cut(s)	271, 974, 2158, 3106, 3107
BsaWI	WCCGGW	3 cut(s)	439, 2413, 2902
BsaXI	ACNNNNNCTCC	4 cut(s)	871, 901, 1676, 1706
Bsc4I	CCNNNNNNNGG	8 cut(s)	218, 277, 289, 1099, 1923, 2349, 2534, 3184
Bse118I	RCCGGY	2 cut(s)	145, 439
Bse1I	ACTGG	8 cut(s)	367, 1217, 2073, 2567, 2814, 2947, 2989, 3090
Bse21I	CCTNAGG	1 cut(s)	2100
Bse3DI	GCAATG	6 cut(s)	584, 881, 1124, 1917, 2212, 2320
Bse8I	GATNNNNATC	2 cut(s)	1278, 2904
BseAI	TCCGGA	1 cut(s)	2902
BseBI	CCWGG	4 cut(s)	428, 975, 2159, 3108
BseDI	CCNNGG	5 cut(s)	271, 974, 2158, 3106, 3107
BseGI	GGATG	9 cut(s)	360, 775, 1108, 1387, 1695, 1918, 2539, 3193, 3242
BseJI	GATNNNNATC	2 cut(s)	1278, 2904
BseLI	CCNNNNNNNGG	8 cut(s)	218, 277, 289, 1099, 1923, 2349, 2534, 3184
BseMI	GCAATG	6 cut(s)	584, 881, 1124, 1917, 2212, 2320
BseNI	ACTGG	8 cut(s)	367, 1217, 2073, 2567, 2814, 2947, 2989, 3090
BseRI	GAGGAG	1 cut(s)	2612
BseXI	GCAGC	4 cut(s)	1724, 1981, 2065, 2278
BsgI	GTGCAG	1 cut(s)	1807
BshFI	GGCC	6 cut(s)	237, 276, 324, 1080, 1798, 2479
BshTI	ACCGGT	1 cut(s)	439
BsiHKAI	GWGCWC	1 cut(s)	683
BsiHKCI	CYCGRG	3 cut(s)	335, 1610, 1848
BsiSI	CCGG	6 cut(s)	146, 278, 440, 2295, 2414, 2903
BslFI	GGGAC	3 cut(s)	1171, 1192, 3232
BslI	CCNNNNNNNGG	8 cut(s)	218, 277, 289, 1099, 1923, 2349, 2534, 3184
BsmAI	GTCTC	8 cut(s)	605, 807, 1150, 1316, 1864, 2882, 2971, 3244
BsmBI	CGTCTC	1 cut(s)	2971
BsmFI	GGGAC	3 cut(s)	1171, 1192, 3232
BsmI	GAATGC	1 cut(s)	494
BsnI	GGCC	6 cut(s)	237, 276, 324, 1080, 1798, 2479
Bso31I	GGTCTC	1 cut(s)	1864
BsoBI	CYCGRG	3 cut(s)	335, 1610, 1848
Bsp1286I	GDGCHC	2 cut(s)	683, 1849
Bsp13I	TCCGGA	1 cut(s)	2902
BspACI	CCGC	4 cut(s)	209, 1747, 2385, 2803
BspANI	GGCC	6 cut(s)	237, 276, 324, 1080, 1798, 2479
BspEI	TCCGGA	1 cut(s)	2902
BspHI	TCATGA	4 cut(s)	559, 1210, 2278, 2706
BspLI	GGNNCC	4 cut(s)	282, 1617, 1797, 2659
BspMAI	CTGCAG	2 cut(s)	322, 1069
BspMI	ACCTGC	2 cut(s)	2155, 2697
BspPI	GGATC	4 cut(s)	300, 2724, 2894, 2913
BspQI	GCTCTTC	2 cut(s)	795, 2120
BspTI	CTTAAG	2 cut(s)	806, 908
BspTNI	GGTCTC	1 cut(s)	1864
BsrDI	GCAATG	6 cut(s)	584, 881, 1124, 1917, 2212, 2320
BsrFI	RCCGGY	2 cut(s)	145, 439
BsrI	ACTGG	8 cut(s)	367, 1217, 2073, 2567, 2814, 2947, 2989, 3090
BssAI	RCCGGY	2 cut(s)	145, 439
BssECI	CCNNGG	5 cut(s)	271, 974, 2158, 3106, 3107
BssNAI	GTATAC	1 cut(s)	2839
BssT1I	CCWWGG	1 cut(s)	271
Bst1107I	GTATAC	1 cut(s)	2839
Bst2UI	CCWGG	4 cut(s)	428, 975, 2159, 3108
Bst4CI	ACNGT	7 cut(s)	56, 314, 474, 1076, 1250, 2029, 2140
Bst6I	CTCTTC	5 cut(s)	795, 1458, 2120, 2193, 3198
BstAFI	CTTAAG	2 cut(s)	806, 908
BstAPI	GCANNNNNTGC	3 cut(s)	883, 1830, 2059
BstBAI	YACGTR	1 cut(s)	345
BstC8I	GCNNGC	5 cut(s)	8, 322, 2070, 2230, 2460
BstENI	CCTNNNNNAGG	1 cut(s)	216
BstF5I	GGATG	9 cut(s)	360, 775, 1108, 1387, 1695, 1918, 2539, 3193, 3242
BstH2I	RGCGCY	3 cut(s)	1372, 2272, 2926
BstHHI	GCGC	5 cut(s)	1371, 1578, 2271, 2694, 2925
BstMAI	GTCTC	8 cut(s)	605, 807, 1150, 1316, 1864, 2882, 2971, 3244
BstNI	CCWGG	4 cut(s)	428, 975, 2159, 3108
BstNSI	RCATGY	3 cut(s)	671, 2232, 2462
BstSCI	CCNGG	6 cut(s)	276, 426, 973, 2157, 2294, 3106
BstSFI	CTRYAG	3 cut(s)	318, 1065, 1873
BstV1I	GCAGC	4 cut(s)	1724, 1981, 2065, 2278
BstV2I	GAAGAC	5 cut(s)	254, 729, 938, 1115, 1570
BstX2I	RGATCY	3 cut(s)	292, 643, 2729
BstYI	RGATCY	3 cut(s)	292, 643, 2729
BstZ17I	GTATAC	1 cut(s)	2839
Bsu36I	CCTNAGG	1 cut(s)	2100
BsuRI	GGCC	6 cut(s)	237, 276, 324, 1080, 1798, 2479
BtgZI	GCGATG	1 cut(s)	1942
BtsCI	GGATG	9 cut(s)	360, 775, 1108, 1387, 1695, 1918, 2539, 3193, 3242
BtsI	GCAGTG	1 cut(s)	1979
BveI	ACCTGC	2 cut(s)	2155, 2697
Cac8I	GCNNGC	5 cut(s)	8, 322, 2070, 2230, 2460
CaiI	CAGNNNCTG	1 cut(s)	373
CciI	TCATGA	4 cut(s)	559, 1210, 2278, 2706
CfoI	GCGC	5 cut(s)	1371, 1578, 2271, 2694, 2925
Cfr10I	RCCGGY	2 cut(s)	145, 439
Cfr13I	GGNCC	9 cut(s)	275, 280, 1767, 1796, 2021, 2155, 2367, 2658, 2686
Csp6I	GTAC	4 cut(s)	15, 980, 2815, 2846
CspAI	ACCGGT	1 cut(s)	439
CviQI	GTAC	4 cut(s)	15, 980, 2815, 2846
EaeI	YGGCCR	1 cut(s)	1078
Eam1104I	CTCTTC	5 cut(s)	795, 1458, 2120, 2193, 3198
EarI	CTCTTC	5 cut(s)	795, 1458, 2120, 2193, 3198
EciI	GGCGGA	1 cut(s)	198
Eco130I	CCWWGG	1 cut(s)	271
Eco147I	AGGCCT	2 cut(s)	324, 2479
Eco24I	GRGCYC	1 cut(s)	1849
Eco31I	GGTCTC	1 cut(s)	1864
Eco32I	GATATC	1 cut(s)	3157
Eco47I	GGWCC	7 cut(s)	280, 1767, 2021, 2155, 2367, 2658, 2686
Eco47III	AGCGCT	1 cut(s)	2924
Eco81I	CCTNAGG	1 cut(s)	2100
Eco88I	CYCGRG	3 cut(s)	335, 1610, 1848
EcoNI	CCTNNNNNAGG	1 cut(s)	216
EcoO109I	RGGNCCY	4 cut(s)	2155, 2367, 2658, 2686
EcoRI	GAATTC	1 cut(s)	1127
EcoRII	CCWGG	4 cut(s)	426, 973, 2157, 3106
EcoRV	GATATC	1 cut(s)	3157
EcoT14I	CCWWGG	1 cut(s)	271
EcoT22I	ATGCAT	1 cut(s)	2234
EcoT38I	GRGCYC	1 cut(s)	1849
ErhI	CCWWGG	1 cut(s)	271
Esp3I	CGTCTC	1 cut(s)	2971
FalI	AAGNNNNNCTT	2 cut(s)	2318, 2350
FaqI	GGGAC	3 cut(s)	1171, 1192, 3232
FbaI	TGATCA	1 cut(s)	1279
FblI	GTMKAC	2 cut(s)	2522, 2838
Fnu4HI	GCNGC	4 cut(s)	1738, 1970, 2054, 2292
FokI	GGATG	9 cut(s)	347, 782, 1115, 1394, 1682, 1925, 2546, 3200, 3229
FriOI	GRGCYC	1 cut(s)	1849
Fsp4HI	GCNGC	4 cut(s)	1738, 1970, 2054, 2292
FspBI	CTAG	6 cut(s)	1185, 1308, 1956, 2423, 2471, 2892
FspI	TGCGCA	1 cut(s)	2693
GlaI	GCGC	5 cut(s)	1370, 1577, 2270, 2693, 2924
GluI	GCNGC	4 cut(s)	1738, 1970, 2054, 2292
GsuI	CTGGAG	5 cut(s)	350, 548, 611, 2831, 2964
HaeII	RGCGCY	3 cut(s)	1372, 2272, 2926
HaeIII	GGCC	6 cut(s)	237, 276, 324, 1080, 1798, 2479
HapII	CCGG	6 cut(s)	146, 278, 440, 2295, 2414, 2903
HhaI	GCGC	5 cut(s)	1371, 1578, 2271, 2694, 2925
Hin6I	GCGC	5 cut(s)	1369, 1576, 2269, 2692, 2923
HinP1I	GCGC	5 cut(s)	1369, 1576, 2269, 2692, 2923
HincII	GTYRAC	1 cut(s)	1072
HindII	GTYRAC	1 cut(s)	1072
HindIII	AAGCTT	3 cut(s)	705, 1761, 3116
HpaI	GTTAAC	1 cut(s)	1072
HpaII	CCGG	6 cut(s)	146, 278, 440, 2295, 2414, 2903
HphI	GGTGA	5 cut(s)	68, 1154, 1274, 1274, 3136
Hpy166II	GTNNAC	4 cut(s)	1072, 2498, 2523, 2839
Hpy8I	GTNNAC	4 cut(s)	1072, 2498, 2523, 2839
Hpy99I	CGWCG	1 cut(s)	1136
HpyCH4III	ACNGT	7 cut(s)	56, 314, 474, 1076, 1250, 2029, 2140
HpyCH4IV	ACGT	5 cut(s)	344, 1141, 2500, 2964, 2978
HpySE526I	ACGT	5 cut(s)	344, 1141, 2500, 2964, 2978
HspAI	GCGC	5 cut(s)	1369, 1576, 2269, 2692, 2923
Kpn2I	TCCGGA	1 cut(s)	2902
Ksp22I	TGATCA	1 cut(s)	1279
KspAI	GTTAAC	1 cut(s)	1072
LguI	GCTCTTC	2 cut(s)	795, 2120
LmnI	GCTCC	6 cut(s)	592, 1376, 1600, 2005, 2794, 2866
Lsp1109I	GCAGC	4 cut(s)	1724, 1981, 2065, 2278
MaeI	CTAG	6 cut(s)	1185, 1308, 1956, 2423, 2471, 2892
MaeII	ACGT	5 cut(s)	344, 1141, 2500, 2964, 2978
MaeIII	GTNAC	6 cut(s)	56, 347, 663, 670, 2558, 3124
MfeI	CAATTG	1 cut(s)	3063
MflI	RGATCY	3 cut(s)	292, 643, 2729
MhlI	GDGCHC	2 cut(s)	683, 1849
MlsI	TGGCCA	1 cut(s)	1080
MluNI	TGGCCA	1 cut(s)	1080
MlyI	GAGTC	6 cut(s)	497, 842, 1153, 1811, 2177, 2269
MmeI	TCCRAC	1 cut(s)	513
Mox20I	TGGCCA	1 cut(s)	1080
Mph1103I	ATGCAT	1 cut(s)	2234
MroI	TCCGGA	1 cut(s)	2902
MroXI	GAANNNNTTC	2 cut(s)	2570, 3101
MscI	TGGCCA	1 cut(s)	1080
Msp20I	TGGCCA	1 cut(s)	1080
MspA1I	CMGCKG	2 cut(s)	1043, 1757
MspCI	CTTAAG	2 cut(s)	806, 908
MspI	CCGG	6 cut(s)	146, 278, 440, 2295, 2414, 2903
MspR9I	CCNGG	6 cut(s)	278, 428, 975, 2159, 2296, 3108
MunI	CAATTG	1 cut(s)	3063
Mva1269I	GAATGC	1 cut(s)	494
MvaI	CCWGG	4 cut(s)	428, 975, 2159, 3108
NciI	CCSGG	2 cut(s)	278, 2296
NlaIV	GGNNCC	4 cut(s)	282, 1617, 1797, 2659
NmeAIII	GCCGAG	1 cut(s)	2936
NmuCI	GTSAC	4 cut(s)	56, 663, 2558, 3124
NsbI	TGCGCA	1 cut(s)	2693
NsiI	ATGCAT	1 cut(s)	2234
NspI	RCATGY	3 cut(s)	671, 2232, 2462
PaeI	GCATGC	2 cut(s)	2232, 2462
PaeR7I	CTCGAG	2 cut(s)	1610, 1848
PagI	TCATGA	4 cut(s)	559, 1210, 2278, 2706
PasI	CCCWGGG	1 cut(s)	3107
PceI	AGGCCT	2 cut(s)	324, 2479
PciI	ACATGT	1 cut(s)	667
PciSI	GCTCTTC	2 cut(s)	795, 2120
PctI	GAATGC	1 cut(s)	494
PdmI	GAANNNNTTC	2 cut(s)	2570, 3101
PflFI	GACNNNGTC	1 cut(s)	2656
PflMI	CCANNNNNTGG	1 cut(s)	3184
PfoI	TCCNGGA	1 cut(s)	426
PinAI	ACCGGT	1 cut(s)	439
PkrI	GCNGC	4 cut(s)	1739, 1971, 2055, 2293
PleI	GAGTC	6 cut(s)	497, 841, 1153, 1811, 2177, 2269
PpsI	GAGTC	6 cut(s)	497, 841, 1153, 1811, 2177, 2269
Ppu21I	YACGTR	1 cut(s)	345
PpuMI	RGGWCCY	4 cut(s)	2155, 2367, 2658, 2686
PscI	ACATGT	1 cut(s)	667
PshBI	ATTAAT	2 cut(s)	1892, 2376
PsiI	TTATAA	1 cut(s)	1461
Psp5II	RGGWCCY	4 cut(s)	2155, 2367, 2658, 2686
Psp6I	CCWGG	4 cut(s)	426, 973, 2157, 3106
PspGI	CCWGG	4 cut(s)	426, 973, 2157, 3106
PspN4I	GGNNCC	4 cut(s)	282, 1617, 1797, 2659
PspPI	GGNCC	9 cut(s)	275, 280, 1767, 1796, 2021, 2155, 2367, 2658, 2686
PspPPI	RGGWCCY	4 cut(s)	2155, 2367, 2658, 2686
PspXI	VCTCGAGB	1 cut(s)	1610
PstI	CTGCAG	2 cut(s)	322, 1069
PstNI	CAGNNNCTG	1 cut(s)	373
PsuI	RGATCY	3 cut(s)	292, 643, 2729
PsyI	GACNNNGTC	1 cut(s)	2656
PvuII	CAGCTG	2 cut(s)	1043, 1757
RsaI	GTAC	4 cut(s)	16, 981, 2816, 2847
RsaNI	GTAC	4 cut(s)	15, 980, 2815, 2846
SapI	GCTCTTC	2 cut(s)	795, 2120
SatI	GCNGC	4 cut(s)	1738, 1970, 2054, 2292
Sau96I	GGNCC	9 cut(s)	275, 280, 1767, 1796, 2021, 2155, 2367, 2658, 2686
SbfI	CCTGCAGG	1 cut(s)	322
ScaI	AGTACT	2 cut(s)	16, 2816
SchI	GAGTC	6 cut(s)	497, 842, 1153, 1811, 2177, 2269
ScrFI	CCNGG	6 cut(s)	278, 428, 975, 2159, 2296, 3108
SdaI	CCTGCAGG	1 cut(s)	322
SduI	GDGCHC	2 cut(s)	683, 1849
SfcI	CTRYAG	3 cut(s)	318, 1065, 1873
Sfr274I	CTCGAG	2 cut(s)	1610, 1848
SinI	GGWCC	7 cut(s)	280, 1767, 2021, 2155, 2367, 2658, 2686
SlaI	CTCGAG	2 cut(s)	1610, 1848
SmlI	CTYRAG	4 cut(s)	806, 908, 1610, 1848
SmoI	CTYRAG	4 cut(s)	806, 908, 1610, 1848
SpeI	ACTAGT	1 cut(s)	2891
SphI	GCATGC	2 cut(s)	2232, 2462
Sse8387I	CCTGCAGG	1 cut(s)	322
SseBI	AGGCCT	2 cut(s)	324, 2479
SsiI	CCGC	4 cut(s)	209, 1747, 2385, 2803
SspI	AATATT	4 cut(s)	824, 1666, 2395, 2544
SspMI	CTAG	6 cut(s)	1185, 1308, 1956, 2423, 2471, 2892
StuI	AGGCCT	2 cut(s)	324, 2479
StyD4I	CCNGG	6 cut(s)	276, 426, 973, 2157, 2294, 3106
StyI	CCWWGG	1 cut(s)	271
TaaI	ACNGT	7 cut(s)	56, 314, 474, 1076, 1250, 2029, 2140
TaiI	ACGT	5 cut(s)	347, 1144, 2503, 2967, 2981
TatI	WGTACW	2 cut(s)	14, 2814
TseFI	GTSAC	4 cut(s)	56, 663, 2558, 3124
TseI	GCWGC	4 cut(s)	1737, 1969, 2053, 2291
Tsp45I	GTSAC	4 cut(s)	56, 663, 2558, 3124
TspGWI	ACGGA	1 cut(s)	383
Tth111I	GACNNNGTC	1 cut(s)	2656
Van91I	CCANNNNNTGG	1 cut(s)	3184
Vha464I	CTTAAG	2 cut(s)	806, 908
VpaK11BI	GGWCC	7 cut(s)	280, 1767, 2021, 2155, 2367, 2658, 2686
VspI	ATTAAT	2 cut(s)	1892, 2376
XagI	CCTNNNNNAGG	1 cut(s)	216
XapI	RAATTY	3 cut(s)	84, 1127, 1989
XbaI	TCTAGA	2 cut(s)	1955, 2470
XceI	RCATGY	3 cut(s)	671, 2232, 2462
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1706
XhoI	CTCGAG	2 cut(s)	1610, 1848
XmiI	GTMKAC	2 cut(s)	2522, 2838
XmnI	GAANNNNTTC	2 cut(s)	2570, 3101
XspI	CTAG	6 cut(s)	1185, 1308, 1956, 2423, 2471, 2892
ZrmI	AGTACT	2 cut(s)	16, 2816
Zsp2I	ATGCAT	1 cut(s)	2234

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.