Rroxscaffold_7G00156900

Belongs to the peptidase C19 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
800465 .. 809057
8593 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00156900.1

Sequence Viewer

Length: 3510 bp
ATGAGCCGGCCAAGTACTCGGAGTAAAAACAAACGAAATAAGCAAGGGGATAATGGTGACACCACTTCTGAAATATTGAGGAAAATTCATGCAACGGGTGAAATAACGAATCAGGATATAAACACGCTGTATAAAATTTCAAAGCCGGTTTGTCAGGGCTGCCGTGTGAATACTAAAGACAATCCGAATTGCTTTTGTGGGCTAATTCCACCTCCTAATGGCAGCCGGAAATCTGGCTTGTGGCAGAAGACATCTGAGATTCTGCAAAACCTTGGCCCGGACCCTTCTCAGGATCTTCGTTCTTCTGATGACTGTCCTGCAGGCCTCACAAATCTCGGTGCGACATGTTATGCTAACAGCATACTCCAGTGTTTGTATATGAACAAGCCCTTTCGTGAAGGTATCTTCTTGGTTGAACCTGATGTCTTGGAACAACAGCCGGTGTTGAATCAACTTTCTCGGCTTTTTGCTCAGTTGCATCTCAGCAAAATGGCTTTCATAGACTCATCCCCATTTGTGAAAACTTTGGAGTTGGATAATGGAGTTCAACAGGACAGTCATGAATTTCTAACGTTATTGCTGTCTTTGTTGGAACGTTGTCTAAGCCACTCTAAAATTTTGAAGGCAAAAGCTATTGTTCAAGATCTTTTCCGTGGAAGTGTGTCACATGTTACGAGGTGCTCAAAATGTGGAAAAGACTCTGAAGCTTCTTCAAACATGGAAGACTTTTATGAATTGGAGTTGAATGTGAAGGGTTTGAAAAGTTTGGATGAGAGTTTAGATGATTACCTCAGTGTTGAAGAGCTTCAGGGAGACAATCAATATTTCTGTGAGTCATGTAAAACAAGAGTTGATGCTACTCGAAGCATCAAGTTGCGCACATTGCCTACTGTTCTGAATTTTCAGCTTAAGCGATGTGTTTTCCTTCCAAAGACGACAACAAAGAAGAAGATTACATCTGCATTTATGTTTCCTGGAGTACTTGATATGAGGCAGAGGCTATCTGAGCCTTCTCAGATTGAATCAATATATGACTTGTCAGCTGTGCTGATTCACAAGGGAACTGCAGTTAACAGTGGCCACTATGTAGCACATATCAAGGATGAGAAGACAGGGCAATGGTGGGAATTTGACGATGAGCATGTCTCAAACTTAGGGACTCACCCGTTTGGAGAAGGGACTTCTAGTTCCAATAGCAAGCCTCTTAAACCTGAAGCAGTTAACCCATCTTGCTCAGAACAGATGAATGGTGTTTCTAATGGTGATAAGATGGATATTGATCACCAACAACCTTCAGATTCTATTACCAGTTGTGATGTGGAGACATTTTCATCAAGTGATGCATATATGCTGATGTATAATCTCAGGCATTCCTGGAAGGATAATGGGAAAGCCCATGTTGAATGTAATGCCAATAATATGAAGATAGAAGATGATAGTGTTTCTGGTTCTCTTCCATTTAATCTTTGTGAAGAGATTAAAAGCAGTAATGCATTGTATCTTGAATCTTGCCAAAAATACACATTTAAGAAGGAAGAAGAGATGAGTCGTATCAAAGAACGAAGACAGGAAGTGCGGTCAATTTTGTCTGAAGCTCCTGTTCGATCACTTGAGGAACCTTTTTTTTGGGTTTCAACAGATTGGCTTCGTCAGTGGGCTGACAACATTACTCCACCTGTTCTTGACAACAGCTCCATCCAATGCATGCATGGAAAGGTTCCAGCATCTAAGGTTGGCTCCATGAAGCGGTTCTCAGCTGAAGCTTGGACCAAGTTGTTCTCTAAGCACAATGGGGGGCCAATTCTGACCAATGATGACTCCTGCACGATTTGCCTTATTGATGGGGCTCGAGATGTGGTCTCTGCTGACAGCTATAGGGATAGGAGAATATTAATGAAGCAAGTTGCTGAGGATGCCATTGCAGGGAGGTGTTCAGATGGAACATACTATGTTTCTAGATCATGGTTGCAGCAGTGGCTTAAAAGAAAAATTCTTGATGCTCCATCTGAAGCTGATGCAGGACCAACAGTTTCAATCAGGTGTCCTCATGGACAGCTTTTGCCTGAGCAAGCCCCTGGTGCTAAGAGATTGCTTATTCCGGAGATCCTCTGGTTCTTCCTTTATCAAGATGCTTTAACAGTAAAACCTGCTGAGGACCTGGGTTGTTCAACTTTTCTCTCAGACTCTCTACAGTGTTCTGAGTGCAGTGATGAACTATCTGAAGTTGCATGCATGGAGGATTCTTTAAGATTGGTCAGGGAAAAACAGCGCCAGACTCATGATAAATTGGCTGCCGGGAAAAGTATTCCTCTTTCTCTGCATTGCAAGTATTACTTGATACCCTATTCTTGGCTTTCAAAATGGAGAACCTACATCAATGCAGCCGGAAGGAATATTTCTTCAGTAGAGAAACCGGAAACATTAGATGGCATCATGGATTTGATCAAGTGTGAAAAGCACTCACGACTTCTAGAAAGGCCTGTTGATCTGGTCTGTAAACGTGGTTTGATTTCACAAAAGTCTTCCCCTGTGGATGGGCTAATATTCATTACTGAGAGTGACTGGAAATCCTTCTGTGAGGAATGGGGTGGTATTGAGGAAAAAGGTGTATCGGCTGAAATCAAGTTAAGTAATACTGAAGGAAATAACTTGGCAGAGTCCTCTGATGATATGCAAATCTGTGAGGAGGACTTGAGTACTCCAAATCTCGTGAATAGTGAAGTTGATTCTAGCTCGCTTGTGATTAGGACTTTCCCTGAGATATGTGAGGACTGCATTGGAGAGAAAGAAAGCAGGGAGCTAATGCGAAAGCTGGAGTACTGCAATGAGGATATATATGTATACTTGGTACATGGCAAGGAAGCTCCAAAATATATTTTACAAGCATCTGAGACTAGTTTTGATCCAGATCGCCGAGTTTCCAAGCGCTCTCGAAAGACAAACACCGGAGATCAAATAAGTTTGAAAGTCTCTGGTTCTACATCGATATATCAGTTAAAAATGATGATATGGGAATCTTTTGGGGTTGTTAAGGAAAACCAGATACTTCACAAAGGCACCCGAATAATTGATAGTGAATGTGCTACTCTGGCAGACTTGAACATATTCCCTGGGGATAAGCTTTGGGTGACTGATTCAGAAGTCCATGAGAACCGAGATATTGCTGTTGTGAAACTGGCTTCTATCAGTTCTTTCGTTAGTGACTATTCTTGCTTTTCTTTGGCAGAAGCAGTTCTTGAACCTAGTATTGGTGAGCTTCCTGCACCTAAGAAGGCTGGTCCAATGTGTAAAGTAGATCGCCCTCTCCCTTCCCCTACCCCGTACGAGGATGTGTCTCATGCAGCCATTCTATGCTTGCCTACGAAAGTCGGACATGGCGGCCCTGCTCTGATTCCTGAGGCTGCTGCTGCATCTTCTCTCTTTGCTCCTCCTGATCTTCCTGGAGAAGATGATATGTTTTCTTCTTGCTGCTTATCCATTGATAACAACCAAGCTCTGGTTCAGACTTGA

Protein Analysis

1169

Amino Acids

130.49

Weight (kDa)

5.37

Isoelectric Point (pI)

54.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UCH PF00443 107 - 453 2e-51 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 107 - 382 7.8e-17 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 878
Acc36I ACCTGC 1 cut(s) 2155
AccB1I GGYRCC 1 cut(s) 3056
AccB7I CCANNNNNTGG 1 cut(s) 3496
AccI GTMKAC 1 cut(s) 2841
AccIII TCCGGA 1 cut(s) 2098
AciI CCGC 3 cut(s) 1576, 1747, 3378
AclI AACGTT 2 cut(s) 572, 595
AclWI GGATC 3 cut(s) 300, 2098, 2897
AcoI YGGCCR 2 cut(s) 8, 1078
AcsI RAATTY 7 cut(s) 84, 135, 563, 615, 898, 1127, 1989
AfaI GTAC 6 cut(s) 16, 981, 2698, 2819, 2850, 3323
AfeI AGCGCT 1 cut(s) 2927
AflII CTTAAG 1 cut(s) 908
AflIII ACRYGT 2 cut(s) 344, 667
AhlI ACTAGT 1 cut(s) 2894
AjnI CCWGG 6 cut(s) 973, 1373, 2074, 2157, 3109, 3439
AjuI GAANNNNNNNTTGG 3 cut(s) 3231, 3263, 3483
AloI GAACNNNNNNTCC 2 cut(s) 1171, 1203
Alw21I GWGCWC 1 cut(s) 683
Alw26I GTCTC 7 cut(s) 807, 1150, 1316, 1864, 2885, 2974, 3339
AlwI GGATC 3 cut(s) 300, 2098, 2897
Ama87I CYCGRG 1 cut(s) 1848
Aor13HI TCCGGA 1 cut(s) 2098
Aor51HI AGCGCT 1 cut(s) 2927
AoxI GGCC 7 cut(s) 8, 274, 322, 1078, 1796, 2477, 3379
ApoI RAATTY 7 cut(s) 84, 135, 563, 615, 898, 1127, 1989
AseI ATTAAT 1 cut(s) 1892
Asp700I GAANNNNTTC 5 cut(s) 804, 1748, 2570, 3104, 3231
AspLEI GCGC 3 cut(s) 879, 2271, 2928
AspS9I GGNCC 8 cut(s) 275, 280, 1767, 1796, 2021, 2155, 3278, 3380
AsuC2I CCSGG 2 cut(s) 278, 2296
AsuHPI GGTGA 7 cut(s) 68, 110, 1154, 1274, 1274, 3139, 3263
AvaI CYCGRG 1 cut(s) 1848
AvaII GGWCC 5 cut(s) 280, 1767, 2021, 2155, 3278
AxyI CCTNAGG 1 cut(s) 3396
BalI TGGCCA 1 cut(s) 1080
BanI GGYRCC 1 cut(s) 3056
BanII GRGCYC 1 cut(s) 1849
BauI CACGAG 1 cut(s) 2708
BbsI GAAGAC 5 cut(s) 254, 729, 1115, 1570, 2514
Bbv12I GWGCWC 1 cut(s) 683
BbvCI CCTCAGC 2 cut(s) 1908, 2151
BccI CCATC 8 cut(s) 1234, 1264, 1703, 1835, 1931, 2011, 2420, 2528
BceAI ACGGC 1 cut(s) 147
BciT130I CCWGG 6 cut(s) 975, 1375, 2076, 2159, 3111, 3441
BclI TGATCA 2 cut(s) 1279, 2442
BcnI CCSGG 2 cut(s) 278, 2296
BcoDI GTCTC 7 cut(s) 807, 1150, 1316, 1864, 2885, 2974, 3339
BcuI ACTAGT 1 cut(s) 2894
BfaI CTAG 6 cut(s) 1185, 1956, 2471, 2730, 2895, 3243
BfmI CTRYAG 4 cut(s) 318, 1065, 1873, 2189
BfoI RGCGCY 2 cut(s) 2272, 2929
BfrI CTTAAG 1 cut(s) 908
BfuAI ACCTGC 1 cut(s) 2155
BglII AGATCT 1 cut(s) 643
BmcAI AGTACT 4 cut(s) 16, 981, 2698, 2819
Bme1390I CCNGG 8 cut(s) 278, 975, 1375, 2076, 2159, 2296, 3111, 3441
Bme18I GGWCC 5 cut(s) 280, 1767, 2021, 2155, 3278
BmeT110I CYCGRG 1 cut(s) 1848
BmgT120I GGNCC 8 cut(s) 275, 280, 1767, 1796, 2021, 2155, 3278, 3380
BmiI GGNNCC 6 cut(s) 282, 1617, 1719, 1738, 1797, 3058
BmrFI CCNGG 8 cut(s) 278, 975, 1375, 2076, 2159, 2296, 3111, 3441
BpiI GAAGAC 5 cut(s) 254, 729, 1115, 1570, 2514
BplI GAGNNNNNCTC 2 cut(s) 1130, 1162
BpmI CTGGAG 4 cut(s) 350, 996, 2834, 3462
Bpu10I CCTNAGC 3 cut(s) 1908, 2064, 2151
BpuEI CTTGAG 2 cut(s) 1631, 2713
BpuMI CCSGG 2 cut(s) 278, 2296
Bsa29I ATCGAT 1 cut(s) 2984
BsaBI GATNNNNATC 2 cut(s) 1278, 2907
BsaI GGTCTC 1 cut(s) 1864
BsaJI CCNNGG 6 cut(s) 271, 652, 2074, 2158, 3109, 3110
BsaWI WCCGGW 3 cut(s) 2098, 2413, 2945
BsaXI ACNNNNNCTCC 2 cut(s) 1676, 1706
Bse118I RCCGGY 3 cut(s) 6, 145, 439
Bse1I ACTGG 4 cut(s) 367, 1308, 2567, 3180
Bse21I CCTNAGG 1 cut(s) 3396
Bse3DI GCAATG 5 cut(s) 881, 1124, 1917, 2320, 2830
Bse8I GATNNNNATC 2 cut(s) 1278, 2907
BseAI TCCGGA 1 cut(s) 2098
BseBI CCWGG 6 cut(s) 975, 1375, 2076, 2159, 3111, 3441
BseCI ATCGAT 1 cut(s) 2984
BseDI CCNNGG 6 cut(s) 271, 652, 2074, 2158, 3109, 3110
BseGI GGATG 7 cut(s) 506, 775, 1108, 1695, 1918, 2539, 3334
BseJI GATNNNNATC 2 cut(s) 1278, 2907
BseMI GCAATG 5 cut(s) 881, 1124, 1917, 2320, 2830
BseNI ACTGG 4 cut(s) 367, 1308, 2567, 3180
BseRI GAGGAG 2 cut(s) 2699, 3417
BsgI GTGCAG 3 cut(s) 1807, 2224, 3246
BshFI GGCC 7 cut(s) 10, 276, 324, 1080, 1798, 2479, 3381
BshNI GGYRCC 1 cut(s) 3056
BshVI ATCGAT 1 cut(s) 2984
BsiHKAI GWGCWC 1 cut(s) 683
BsiHKCI CYCGRG 1 cut(s) 1848
BsiWI CGTACG 1 cut(s) 3321
BslFI GGGAC 2 cut(s) 1171, 1192
BsmAI GTCTC 7 cut(s) 807, 1150, 1316, 1864, 2885, 2974, 3339
BsmFI GGGAC 2 cut(s) 1171, 1192
BsmI GAATGC 1 cut(s) 1369
BsnI GGCC 7 cut(s) 10, 276, 324, 1080, 1798, 2479, 3381
Bso31I GGTCTC 1 cut(s) 1864
BsoBI CYCGRG 1 cut(s) 1848
Bsp1286I GDGCHC 2 cut(s) 683, 1849
Bsp13I TCCGGA 1 cut(s) 2098
BspACI CCGC 3 cut(s) 1576, 1747, 3378
BspANI GGCC 7 cut(s) 10, 276, 324, 1080, 1798, 2479, 3381
BspDI ATCGAT 1 cut(s) 2984
BspEI TCCGGA 1 cut(s) 2098
BspHI TCATGA 2 cut(s) 559, 2278
BspLI GGNNCC 6 cut(s) 282, 1617, 1719, 1738, 1797, 3058
BspMAI CTGCAG 2 cut(s) 322, 1069
BspMI ACCTGC 1 cut(s) 2155
BspPI GGATC 3 cut(s) 300, 2098, 2897
BspQI GCTCTTC 1 cut(s) 795
BspT107I GGYRCC 1 cut(s) 3056
BspTI CTTAAG 1 cut(s) 908
BspTNI GGTCTC 1 cut(s) 1864
BsrDI GCAATG 5 cut(s) 881, 1124, 1917, 2320, 2830
BsrFI RCCGGY 3 cut(s) 6, 145, 439
BsrI ACTGG 4 cut(s) 367, 1308, 2567, 3180
BssAI RCCGGY 3 cut(s) 6, 145, 439
BssECI CCNNGG 6 cut(s) 271, 652, 2074, 2158, 3109, 3110
BssNAI GTATAC 1 cut(s) 2842
BssSI CACGAG 1 cut(s) 2708
BssT1I CCWWGG 1 cut(s) 271
Bst1107I GTATAC 1 cut(s) 2842
Bst2BI CACGAG 1 cut(s) 2708
Bst2UI CCWGG 6 cut(s) 975, 1375, 2076, 2159, 3111, 3441
Bst4CI ACNGT 7 cut(s) 314, 557, 892, 1076, 2029, 2140, 2193
Bst6I CTCTTC 4 cut(s) 795, 1458, 1467, 1533
BstAFI CTTAAG 1 cut(s) 908
BstAPI GCANNNNNTGC 1 cut(s) 1830
BstC8I GCNNGC 8 cut(s) 8, 322, 1199, 1706, 2070, 2230, 2735, 3356
BstDSI CCRYGG 1 cut(s) 652
BstF5I GGATG 7 cut(s) 506, 775, 1108, 1695, 1918, 2539, 3334
BstH2I RGCGCY 2 cut(s) 2272, 2929
BstHHI GCGC 3 cut(s) 879, 2271, 2928
BstMAI GTCTC 7 cut(s) 807, 1150, 1316, 1864, 2885, 2974, 3339
BstMWI GCNNNNNNNGC 8 cut(s) 883, 1006, 1830, 1913, 1975, 2078, 3089, 3407
BstNI CCWGG 6 cut(s) 975, 1375, 2076, 2159, 3111, 3441
BstNSI RCATGY 5 cut(s) 348, 671, 1145, 1708, 2232
BstSCI CCNGG 8 cut(s) 276, 973, 1373, 2074, 2157, 2294, 3109, 3439
BstSFI CTRYAG 4 cut(s) 318, 1065, 1873, 2189
BstV2I GAAGAC 5 cut(s) 254, 729, 1115, 1570, 2514
BstX2I RGATCY 3 cut(s) 292, 643, 2103
BstYI RGATCY 3 cut(s) 292, 643, 2103
BstZ17I GTATAC 1 cut(s) 2842
Bsu15I ATCGAT 1 cut(s) 2984
Bsu36I CCTNAGG 1 cut(s) 3396
BsuRI GGCC 7 cut(s) 10, 276, 324, 1080, 1798, 2479, 3381
BsuTUI ATCGAT 1 cut(s) 2984
BtgI CCRYGG 1 cut(s) 652
BtgZI GCGATG 1 cut(s) 928
BtsCI GGATG 7 cut(s) 506, 775, 1108, 1695, 1918, 2539, 3334
BtsI GCAGTG 2 cut(s) 1979, 2212
BtsIMutI CAGTG 7 cut(s) 374, 799, 1081, 1658, 1979, 2198, 2212
BveI ACCTGC 1 cut(s) 2155
Cac8I GCNNGC 8 cut(s) 8, 322, 1199, 1706, 2070, 2230, 2735, 3356
CciI TCATGA 2 cut(s) 559, 2278
CfoI GCGC 3 cut(s) 879, 2271, 2928
Cfr10I RCCGGY 3 cut(s) 6, 145, 439
Cfr13I GGNCC 8 cut(s) 275, 280, 1767, 1796, 2021, 2155, 3278, 3380
ClaI ATCGAT 1 cut(s) 2984
Csp6I GTAC 6 cut(s) 15, 980, 2697, 2818, 2849, 3322
CviQI GTAC 6 cut(s) 15, 980, 2697, 2818, 2849, 3322
EaeI YGGCCR 2 cut(s) 8, 1078
Eam1104I CTCTTC 4 cut(s) 795, 1458, 1467, 1533
EarI CTCTTC 4 cut(s) 795, 1458, 1467, 1533
Eco130I CCWWGG 1 cut(s) 271
Eco147I AGGCCT 2 cut(s) 324, 2479
Eco24I GRGCYC 1 cut(s) 1849
Eco31I GGTCTC 1 cut(s) 1864
Eco47I GGWCC 5 cut(s) 280, 1767, 2021, 2155, 3278
Eco47III AGCGCT 1 cut(s) 2927
Eco81I CCTNAGG 1 cut(s) 3396
Eco88I CYCGRG 1 cut(s) 1848
EcoO109I RGGNCCY 1 cut(s) 2155
EcoRII CCWGG 6 cut(s) 973, 1373, 2074, 2157, 3109, 3439
EcoT14I CCWWGG 1 cut(s) 271
EcoT22I ATGCAT 5 cut(s) 1345, 1495, 1706, 1710, 2234
EcoT38I GRGCYC 1 cut(s) 1849
ErhI CCWWGG 1 cut(s) 271
FalI AAGNNNNNCTT 4 cut(s) 2318, 2350, 3219, 3251
FaqI GGGAC 2 cut(s) 1171, 1192
FbaI TGATCA 2 cut(s) 1279, 2442
FblI GTMKAC 1 cut(s) 2841
FokI GGATG 7 cut(s) 493, 782, 1115, 1682, 1925, 2546, 3341
FriOI GRGCYC 1 cut(s) 1849
FspBI CTAG 6 cut(s) 1185, 1956, 2471, 2730, 2895, 3243
FspI TGCGCA 1 cut(s) 878
GlaI GCGC 3 cut(s) 878, 2270, 2927
GsuI CTGGAG 4 cut(s) 350, 996, 2834, 3462
HaeII RGCGCY 2 cut(s) 2272, 2929
HaeIII GGCC 7 cut(s) 10, 276, 324, 1080, 1798, 2479, 3381
HhaI GCGC 3 cut(s) 879, 2271, 2928
Hin6I GCGC 3 cut(s) 877, 2269, 2926
HinP1I GCGC 3 cut(s) 877, 2269, 2926
HincII GTYRAC 2 cut(s) 1072, 1222
HindII GTYRAC 2 cut(s) 1072, 1222
HindIII AAGCTT 3 cut(s) 705, 1761, 3119
HpaI GTTAAC 2 cut(s) 1072, 1222
HphI GGTGA 7 cut(s) 68, 110, 1154, 1274, 1274, 3139, 3263
Hpy166II GTNNAC 4 cut(s) 1072, 1222, 2498, 2842
Hpy8I GTNNAC 4 cut(s) 1072, 1222, 2498, 2842
HpyCH4III ACNGT 7 cut(s) 314, 557, 892, 1076, 2029, 2140, 2193
HpyCH4IV ACGT 3 cut(s) 572, 595, 2500
HpyF10VI GCNNNNNNNGC 8 cut(s) 883, 1006, 1830, 1913, 1975, 2078, 3089, 3407
HpySE526I ACGT 3 cut(s) 572, 595, 2500
HspAI GCGC 3 cut(s) 877, 2269, 2926
Kpn2I TCCGGA 1 cut(s) 2098
KroI GCCGGC 1 cut(s) 6
KroNI GCCGGC 1 cut(s) 8
Ksp22I TGATCA 2 cut(s) 1279, 2442
KspAI GTTAAC 2 cut(s) 1072, 1222
LguI GCTCTTC 1 cut(s) 795
LmnI GCTCC 7 cut(s) 1600, 1697, 1742, 2005, 2797, 2869, 3430
MaeI CTAG 6 cut(s) 1185, 1956, 2471, 2730, 2895, 3243
MaeII ACGT 3 cut(s) 572, 595, 2500
MaeIII GTNAC 6 cut(s) 56, 663, 670, 2558, 3127, 3200
MflI RGATCY 3 cut(s) 292, 643, 2103
MhlI GDGCHC 2 cut(s) 683, 1849
MlsI TGGCCA 1 cut(s) 1080
MluNI TGGCCA 1 cut(s) 1080
MlyI GAGTC 9 cut(s) 497, 692, 842, 1153, 1555, 1811, 2177, 2269, 2666
MmeI TCCRAC 3 cut(s) 513, 570, 3349
Mox20I TGGCCA 1 cut(s) 1080
Mph1103I ATGCAT 5 cut(s) 1345, 1495, 1706, 1710, 2234
MroI TCCGGA 1 cut(s) 2098
MroNI GCCGGC 1 cut(s) 6
MroXI GAANNNNTTC 5 cut(s) 804, 1748, 2570, 3104, 3231
MscI TGGCCA 1 cut(s) 1080
Msp20I TGGCCA 1 cut(s) 1080
MspA1I CMGCKG 2 cut(s) 1043, 1757
MspCI CTTAAG 1 cut(s) 908
MspR9I CCNGG 8 cut(s) 278, 975, 1375, 2076, 2159, 2296, 3111, 3441
Mva1269I GAATGC 1 cut(s) 1369
MvaI CCWGG 6 cut(s) 975, 1375, 2076, 2159, 3111, 3441
MwoI GCNNNNNNNGC 8 cut(s) 883, 1006, 1830, 1913, 1975, 2078, 3089, 3407
NaeI GCCGGC 1 cut(s) 8
NciI CCSGG 2 cut(s) 278, 2296
NgoMIV GCCGGC 1 cut(s) 6
NlaIV GGNNCC 6 cut(s) 282, 1617, 1719, 1738, 1797, 3058
NmeAIII GCCGAG 2 cut(s) 439, 2939
NmuCI GTSAC 5 cut(s) 56, 663, 2558, 3127, 3200
NsbI TGCGCA 1 cut(s) 878
NsiI ATGCAT 5 cut(s) 1345, 1495, 1706, 1710, 2234
NspI RCATGY 5 cut(s) 348, 671, 1145, 1708, 2232
PaeI GCATGC 2 cut(s) 1708, 2232
PaeR7I CTCGAG 1 cut(s) 1848
PagI TCATGA 2 cut(s) 559, 2278
PasI CCCWGGG 1 cut(s) 3110
PceI AGGCCT 2 cut(s) 324, 2479
PciI ACATGT 2 cut(s) 344, 667
PciSI GCTCTTC 1 cut(s) 795
PctI GAATGC 1 cut(s) 1369
PdiI GCCGGC 1 cut(s) 8
PdmI GAANNNNTTC 5 cut(s) 804, 1748, 2570, 3104, 3231
Pfl23II CGTACG 1 cut(s) 3321
PflMI CCANNNNNTGG 1 cut(s) 3496
PfoI TCCNGGA 3 cut(s) 973, 1373, 3439
PleI GAGTC 9 cut(s) 497, 692, 841, 1153, 1554, 1811, 2177, 2269, 2665
PpsI GAGTC 9 cut(s) 497, 692, 841, 1153, 1554, 1811, 2177, 2269, 2665
PpuMI RGGWCCY 1 cut(s) 2155
PscI ACATGT 2 cut(s) 344, 667
PshBI ATTAAT 1 cut(s) 1892
Psp1406I AACGTT 2 cut(s) 572, 595
Psp5II RGGWCCY 1 cut(s) 2155
Psp6I CCWGG 6 cut(s) 973, 1373, 2074, 2157, 3109, 3439
PspGI CCWGG 6 cut(s) 973, 1373, 2074, 2157, 3109, 3439
PspLI CGTACG 1 cut(s) 3321
PspN4I GGNNCC 6 cut(s) 282, 1617, 1719, 1738, 1797, 3058
PspPI GGNCC 8 cut(s) 275, 280, 1767, 1796, 2021, 2155, 3278, 3380
PspPPI RGGWCCY 1 cut(s) 2155
PstI CTGCAG 2 cut(s) 322, 1069
PsuI RGATCY 3 cut(s) 292, 643, 2103
PvuII CAGCTG 2 cut(s) 1043, 1757
RsaI GTAC 6 cut(s) 16, 981, 2698, 2819, 2850, 3323
RsaNI GTAC 6 cut(s) 15, 980, 2697, 2818, 2849, 3322
SapI GCTCTTC 1 cut(s) 795
Sau96I GGNCC 8 cut(s) 275, 280, 1767, 1796, 2021, 2155, 3278, 3380
SbfI CCTGCAGG 1 cut(s) 322
ScaI AGTACT 4 cut(s) 16, 981, 2698, 2819
SchI GAGTC 9 cut(s) 497, 692, 842, 1153, 1555, 1811, 2177, 2269, 2666
ScrFI CCNGG 8 cut(s) 278, 975, 1375, 2076, 2159, 2296, 3111, 3441
SdaI CCTGCAGG 1 cut(s) 322
SduI GDGCHC 2 cut(s) 683, 1849
SfcI CTRYAG 4 cut(s) 318, 1065, 1873, 2189
Sfr274I CTCGAG 1 cut(s) 1848
SinI GGWCC 5 cut(s) 280, 1767, 2021, 2155, 3278
SlaI CTCGAG 1 cut(s) 1848
SmlI CTYRAG 4 cut(s) 908, 1610, 1848, 2692
SmoI CTYRAG 4 cut(s) 908, 1610, 1848, 2692
SpeI ACTAGT 1 cut(s) 2894
SphI GCATGC 2 cut(s) 1708, 2232
Sse8387I CCTGCAGG 1 cut(s) 322
SseBI AGGCCT 2 cut(s) 324, 2479
SsiI CCGC 3 cut(s) 1576, 1747, 3378
SspI AATATT 5 cut(s) 75, 824, 1890, 2395, 2544
SspMI CTAG 6 cut(s) 1185, 1956, 2471, 2730, 2895, 3243
StuI AGGCCT 2 cut(s) 324, 2479
StyD4I CCNGG 8 cut(s) 276, 973, 1373, 2074, 2157, 2294, 3109, 3439
StyI CCWWGG 1 cut(s) 271
TaaI ACNGT 7 cut(s) 314, 557, 892, 1076, 2029, 2140, 2193
TaiI ACGT 3 cut(s) 575, 598, 2503
TaqI TCGA 5 cut(s) 862, 1603, 1849, 2932, 2984
TatI WGTACW 4 cut(s) 14, 979, 2696, 2817
TauI GCSGC 1 cut(s) 3381
TscAI CASTG 7 cut(s) 374, 799, 1081, 1658, 1979, 2198, 2212
TseFI GTSAC 5 cut(s) 56, 663, 2558, 3127, 3200
Tsp45I GTSAC 5 cut(s) 56, 663, 2558, 3127, 3200
TspGWI ACGGA 1 cut(s) 641
TspRI CASTG 7 cut(s) 374, 799, 1081, 1658, 1979, 2198, 2212
Van91I CCANNNNNTGG 1 cut(s) 3496
Vha464I CTTAAG 1 cut(s) 908
VpaK11BI GGWCC 5 cut(s) 280, 1767, 2021, 2155, 3278
VspI ATTAAT 1 cut(s) 1892
XapI RAATTY 7 cut(s) 84, 135, 563, 615, 898, 1127, 1989
XbaI TCTAGA 2 cut(s) 1955, 2470
XceI RCATGY 5 cut(s) 348, 671, 1145, 1708, 2232
XcmI CCANNNNNNNNNTGG 2 cut(s) 1315, 1706
XhoI CTCGAG 1 cut(s) 1848
XmiI GTMKAC 1 cut(s) 2841
XmnI GAANNNNTTC 5 cut(s) 804, 1748, 2570, 3104, 3231
XspI CTAG 6 cut(s) 1185, 1956, 2471, 2730, 2895, 3243
ZrmI AGTACT 4 cut(s) 16, 981, 2698, 2819
Zsp2I ATGCAT 5 cut(s) 1345, 1495, 1706, 1710, 2234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.