Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010285

Physical Location & Seq

Genomic Coordinates Reverse (-)

18380417 .. 18387239

Gene Structure 6823 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G49600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3204 bp

ATGAGTAGACCTAACACCCGAAACAAAAACAAGAGACAAAGACCAGACGCTGTTGATTCTTCTTCTCAGATTCTCCGGAAAATTCACGAGGCTAATGATGTAACTGATGATGACATTAACCAACTTTTCATGATTTGGAAGCCAGTTTGTCAAGGTTGTCGTGTAAACACTCGTGACAATCCTAACTGCTTTTGTGGCTTGGTTCCACCGCTTAATGGAAGCCGGAAATCTGGTTTGTGGCAGAAAACGTCGGAGATTATTCAGTCTCTTGGTCCAGATCCGACCTTGGACCGTCGTGATTCTGAATCTACACCCGCTGGTCTGACTAATTTGGGTGCTACTTGTTATGCCAACAGTATACTTCAGTGTTTGTACATGAATACTGCTTTCCGAGAAGGAGTTTTTTCTGTTGAGGTTCATGTCTTGAAGCAGAATCCAGTCTTGGATCAGATTGCTCGGCTTTTTGCACAGTTGCATGCTAGCCAAAAGTCCTTTGTTGATTCTGATGCTTTTGTCAAGACGTTGGAGTTGGATAATGGGGTTCAACAGGATACCCATGAGTTCTTGACATTGCTTCTTTCCTTGCTTGAGCGTTGCTTACTCCATTCTGGAGTCAAAGCCAAAACAATAGTTCAAGATCTCTTCAGTGGTAGTGTCTCGCATGTCACCACGTGCTCAAAATGTGGGAGGGATTCCGAAGCTTCGTCAAAGATGGAGGATTTTTATGCCCTTGAGTTGAATGTTAAGGGCCTCAAATCGTTGGATGCTAGTTTGAATGATTACCTTAGCTTGGAGCAGCTTAATGGCGATAATCAATATTTTTGTGGAAGCTGCAATGCTAGAGTAGATGCCACACGCTGCATTAAGCTGCGCACACTACCTCCGGTTATCACTTTTCAGCTCAAACGATGCATTTTCCTTCCTAAGACAACGGCGAAGAAGAAAATCACCTCATCATTTTCCTTTCCTCAAGTGCTGGATATGGGATCGAGATTGGCAGAGTCTTCTCAAAACAAATTGACATACGATCTCTCTGCTGTGTTAATCCACAAAGGAAGCGCTGTTAACAGCGGACATTATGTTGCTCACATAAAAGATGAAAAGACTGGCTTGTGGTGGGAATTTGATGATGAACATGTGTCAGAACTGGGTAAACGTCCATGTAATGAAGCTTCTTCTTCAACTCCACAATCTGAGAGTAATGGTACGGCTAGTAGTGGGAATATCACAGATGGCATTCAATCAGGCTCTTCAGACTGTAGGTCTGCTATTAAGTCAGAGGTTTTCTCATCCAGTGATGCTTATATGCTGATGTATAGTCTTAGATGCGATAAACAGGAAAATCAGGAAGGACAAAAAGAAAATCCTATTGACATTACTAAAGGAGAAGTTAAACAGCTTAAAGGTGGTTATCTTCCAAAACATCTTTCTGAATGGATCAATAACATGAATGCAGTATTCCTTGAGAGTTGCAAGCAATATAATTTAAGAAAGGAAAAAGAATTGAATGCTTTGACTGAAAGGAGGCAAGAAGTACGGACAATCCTTTCAGAAGCTGCTGTTCAGTCACTTGAAGAACAATATTTTTGGATCTCCACAGATTGGCTTCGTCTATGGGCTGATACCACTTTACCTCCCGCTTTGGACAACACCCCTTTACTGTGTTCCCATGGGAAAGTTCATGCCTCAAAAGTGAATTGCATGAAGCGGATATCTGAACTTGCATGGATCAAGTTAGAATCAAAGTTCAATGGCGGACCAAAGTTAGGGAAAGGGGACTACTGCAGGGACTGCCTTATGGATGGTGCTCGCATGGTTGTGTCTTCTGACAGTTATAGGGATCGAAGAACATTCATGAAAAGCATAGCAAATGATGTTCTTTCGGGAAAGTGCGAGGACGGAATGTATTATATCTCTAGAGCATGGTTACAGCAATGGATAAAAAGGAAAAATCTTGATGCTCCTACTGAAGCAGATGCGGGGCCCACAAATGCTATTACGTGCAATCATGGTGAGCTGATGCCAGAGCAAGCACCAGGGGCCAAAAGAGTTGTAGTTCCAGAGAATTTCTGGTCATTCCTTTTTGAAGATGCTCTAAAAGTGATGTCAGAAGATACTTTGGATTGTACTTGTTTTCCTGTGGACTCCAGCCAATGTTGTCATTGCACAGAGGTACTTTCTGAGGTTGCATGCTTCGAGGATTCACTAAGAACATTGAAGGTCAAGCAGCGCCAAAATCACGAGAAGTTAGCCACGGGAAAGGGTATACCATTAACGCCACAAAGCCGATATTTCTTGTTGCCTTCTCCGTGGCTAGTGCAATGGAGAATCTATATTAACATGACTGGAAAAAATAGTTCTTCAGCACCAGAGCCTGAACGTCTTGATGGAGTCATTAATACTCTCAAATGCAAAAAGCATACACGACTCCTTGAAAGGCTCCCTGAACTTGTCTGCAGACGTGGCTCGTATTTTCAGAAAAATCCATCTACAGACAAGCTAACAATCATCCCTGAGCTTGATTGGAAATATTTCTGTGACGAGTGGGGAGGGCTCATGGAGAATGGAATATCTGCTTTTATTGAGGTTGGCAATACAGACCAAAGTTCATCCCCAGACGTCATTGACCTTGAGAAGGATTCTTCTCCGGATGATAATATGGACGTTGATGCTCAACAGCTTATTCTCAGGGCATCCCCAGAGATTTGCGAGGAATGCATAGGAGAGAGAGAAAGCTGTGAGTTGATGCAGAAACTTAGTTACTCTGAGGGAGATGTATTTGTCTGTTTTGTGCGTGGAAAGGAAGCTCCAAAAGCAATGTTAGAGGCATCTGACTCTAGCTTTGAGGTGGATCGGCGTACTTCAAAGCGATCTCGGAGAACAAATTATGGAAACCTGACAAGCCTGAAAGTGTCTGCGACAACGACTGTATACCAATTAAAGATGATGATATGGGAATTACTTGGGGTGATGAAGGAAAACCAGGAACTCCACAAAGGCTCAAAAGTGATTGATCAGGAATCTGCAACCCTTGCAGACATGAACATATTCCCCGGCGACAGGCTTTGGGTGAGAGATACAGAGATGCATGAACACCGCGATATTGCTGATGAGTTATGTGAAAAGAAACCGGGGGCTCAAGATATCGAAGAAGGGTTTCGAGGGACGCTATTGACTGGGAATATCTCTTCTGAAGCCTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0007275 GO:0008150 GO:0009791 GO:0010154 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUSP UCH

Protein Analysis

1067

Amino Acids

119.93

Weight (kDa)

5.73

Isoelectric Point (pI)

50.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	106 - 439	1.6e-51	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	106 - 379	1.4e-15	Ubiquitin carboxyl-terminal hydrolase
DUSP	PF06337	526 - 590	1.4e-06	DUSP domain
DUSP	PF06337	633 - 696	1.9e-07	DUSP domain
DUSP	PF06337	762 - 854	5.3e-06	DUSP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49600 AT3G49600 AT3G49600
fragaria_vesca	FvH4_2g30650 FvH4_2g30650 FvH4_2g30650 FvH4_2g30650
malus_domestica	MD08G1133600.v1.1 MD15G1110500.v1.1
prunus_persica	Prupe.1G462800_v2.0.a1
pyrus_communis	pycom08g11240 pycom15g10080
rosa_chinensis	RchiOBHm_Chr6g0312261
rosa_laevigata	RLG00000010338
rosa_roxburghii	Rroxscaffold_7G00156900
rosa_rugosa	Rorug06G0394400
rosa_samantha	Rh6AG511600 Rh6BG522700 Rh6CG528400 Rh6DG513800
rosa_wichuraiana	Rw6G044500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2622
Acc16I	TGCGCA	1 cut(s)	872
AccB7I	CCANNNNNTGG	1 cut(s)	1602
AccI	GTMKAC	4 cut(s)	7, 358, 2266, 2931
AccII	CGCG	1 cut(s)	3099
AccIII	TCCGGA	2 cut(s)	75, 2647
AciI	CCGC	8 cut(s)	209, 315, 1071, 1638, 1708, 1755, 1979, 3097
AclWI	GGATC	8 cut(s)	272, 453, 994, 1445, 1598, 1736, 1848, 2859
AcsI	RAATTY	3 cut(s)	81, 1121, 2065
AcuI	CTGAAG	5 cut(s)	347, 628, 1236, 1989, 2346
AcvI	CACGTG	1 cut(s)	672
AcyI	GRCGYC	1 cut(s)	2619
AdeI	CACNNNGTG	1 cut(s)	672
AfaI	GTAC	6 cut(s)	374, 1207, 1536, 2128, 2175, 2860
AfeI	AGCGCT	1 cut(s)	1060
AfiI	CCNNNNNNNGG	6 cut(s)	215, 790, 1602, 1766, 2635, 3060
AflIII	ACRYGT	1 cut(s)	1135
AhdI	GACNNNNNGTC	1 cut(s)	1261
AjiI	CACGTC	1 cut(s)	2462
AjnI	CCWGG	2 cut(s)	2035, 2982
AjuI	GAANNNNNNNTTGG	4 cut(s)	425, 457, 1411, 1443
Alw21I	GWGCWC	2 cut(s)	677, 1810
Alw26I	GTCTC	3 cut(s)	28, 270, 661
AlwI	GGATC	8 cut(s)	272, 453, 994, 1445, 1598, 1736, 1848, 2859
AlwNI	CAGNNNCTG	4 cut(s)	50, 1556, 1791, 2375
Aor13HI	TCCGGA	2 cut(s)	75, 2647
Aor51HI	AGCGCT	1 cut(s)	1060
AoxI	GGCC	3 cut(s)	748, 1982, 2040
ApaI	GGGCCC	1 cut(s)	1986
ApeKI	GCWGC	6 cut(s)	796, 831, 858, 868, 1556, 2227
ApoI	RAATTY	3 cut(s)	81, 1121, 2065
ArsI	GACNNNNNNTTYG	2 cut(s)	2825, 2857
AseI	ATTAAT	1 cut(s)	2397
Asp700I	GAANNNNTTC	3 cut(s)	2531, 3047, 3156
AspLEI	GCGC	3 cut(s)	873, 1061, 2232
AspS9I	GGNCC	7 cut(s)	272, 289, 748, 1757, 1982, 1983, 2040
AsuC2I	CCSGG	2 cut(s)	3054, 3132
AsuHPI	GGTGA	5 cut(s)	658, 940, 2024, 2980, 3082
AsuNHI	GCTAGC	1 cut(s)	479
AvaII	GGWCC	3 cut(s)	272, 289, 1757
BaeGI	GKGCMC	1 cut(s)	1986
BanII	GRGCYC	3 cut(s)	1986, 2556, 3139
BarI	GAAGNNNNNNTAC	2 cut(s)	1156, 1188
BauI	CACGAG	3 cut(s)	86, 171, 2240
BbrPI	CACGTG	1 cut(s)	672
BbsI	GAAGAC	2 cut(s)	996, 1815
Bbv12I	GWGCWC	2 cut(s)	677, 1810
BbvI	GCAGC	6 cut(s)	808, 818, 845, 855, 1543, 2239
BccI	CCATC	5 cut(s)	706, 1226, 1796, 2381, 2494
BceAI	ACGGC	2 cut(s)	948, 1224
BcgI	CGANNNNNNTGC	2 cut(s)	1016, 1050
BciT130I	CCWGG	2 cut(s)	2037, 2984
BciVI	GTATCC	1 cut(s)	544
BclI	TGATCA	1 cut(s)	3013
BcnI	CCSGG	2 cut(s)	3054, 3132
BcoDI	GTCTC	3 cut(s)	28, 270, 661
BfaI	CTAG	8 cut(s)	480, 768, 840, 1212, 1917, 2315, 2838, 3202
BfmI	CTRYAG	4 cut(s)	1258, 1783, 2455, 2490
BfoI	RGCGCY	2 cut(s)	1062, 2233
BfuI	GTATCC	1 cut(s)	544
BglII	AGATCT	1 cut(s)	637
BisI	GCNGC	6 cut(s)	797, 832, 859, 869, 1557, 2228
BlsI	GCNGC	6 cut(s)	798, 833, 860, 870, 1558, 2229
Bme1390I	CCNGG	4 cut(s)	2037, 2984, 3054, 3132
Bme18I	GGWCC	3 cut(s)	272, 289, 1757
BmeRI	GACNNNNNGTC	1 cut(s)	1261
BmgBI	CACGTC	1 cut(s)	2462
BmgT120I	GGNCC	7 cut(s)	272, 289, 748, 1757, 1982, 1983, 2040
BmiI	GGNNCC	5 cut(s)	204, 1983, 1984, 2041, 2441
BmrFI	CCNGG	4 cut(s)	2037, 2984, 3054, 3132
BmrI	ACTGGG	2 cut(s)	1157, 3186
BmtI	GCTAGC	1 cut(s)	483
BmuI	ACTGGG	2 cut(s)	1157, 3186
BpiI	GAAGAC	2 cut(s)	996, 1815
BplI	GAGNNNNNCTC	2 cut(s)	1271, 1303
BpmI	CTGGAG	2 cut(s)	630, 2131
Bpu10I	CCTNAGC	2 cut(s)	785, 2514
BpuEI	CTTGAG	6 cut(s)	608, 752, 954, 1484, 2651, 3123
BpuMI	CCSGG	2 cut(s)	3054, 3132
BsaAI	YACGTR	2 cut(s)	672, 2001
BsaHI	GRCGYC	1 cut(s)	2619
BsaJI	CCNNGG	7 cut(s)	285, 1669, 2036, 2253, 2309, 3052, 3131
BsaWI	WCCGGW	3 cut(s)	75, 883, 2647
BsaXI	ACNNNNNCTCC	4 cut(s)	865, 895, 1618, 1648
Bsc4I	CCNNNNNNNGG	6 cut(s)	215, 790, 1602, 1766, 2635, 3060
Bse1I	ACTGG	7 cut(s)	143, 437, 1111, 1152, 1293, 2350, 3181
Bse3DI	GCAATG	6 cut(s)	569, 841, 1940, 2161, 2327, 2823
BseAI	TCCGGA	2 cut(s)	75, 2647
BseBI	CCWGG	2 cut(s)	2037, 2984
BseDI	CCNNGG	7 cut(s)	285, 1669, 2036, 2253, 2309, 3052, 3131
BseGI	GGATG	7 cut(s)	769, 1289, 1807, 2508, 2609, 2656, 2693
BseLI	CCNNNNNNNGG	6 cut(s)	215, 790, 1602, 1766, 2635, 3060
BseMI	GCAATG	6 cut(s)	569, 841, 1940, 2161, 2327, 2823
BseMII	CTCAG	6 cut(s)	80, 1185, 2172, 2505, 2701, 2757
BseNI	ACTGG	7 cut(s)	143, 437, 1111, 1152, 1293, 2350, 3181
BseSI	GKGCMC	1 cut(s)	1986
BseXI	GCAGC	6 cut(s)	808, 818, 845, 855, 1543, 2239
Bsh1236I	CGCG	1 cut(s)	3099
BshFI	GGCC	3 cut(s)	750, 1984, 2042
BsiHKAI	GWGCWC	2 cut(s)	677, 1810
BsiSI	CCGG	6 cut(s)	76, 223, 884, 2648, 3054, 3131
BslFI	GGGAC	3 cut(s)	1790, 1802, 3178
BslI	CCNNNNNNNGG	6 cut(s)	215, 790, 1602, 1766, 2635, 3060
BsmAI	GTCTC	3 cut(s)	28, 270, 661
BsmFI	GGGAC	3 cut(s)	1790, 1802, 3178
BsmI	GAATGC	4 cut(s)	1236, 1456, 1513, 2720
BsnI	GGCC	3 cut(s)	750, 1984, 2042
Bsp120I	GGGCCC	1 cut(s)	1982
Bsp1286I	GDGCHC	5 cut(s)	677, 1810, 1986, 2556, 3139
Bsp13I	TCCGGA	2 cut(s)	75, 2647
Bsp1407I	TGTACA	1 cut(s)	372
Bsp19I	CCATGG	1 cut(s)	1669
BspACI	CCGC	8 cut(s)	209, 315, 1071, 1638, 1708, 1755, 1979, 3097
BspANI	GGCC	3 cut(s)	750, 1984, 2042
BspCNI	CTCAG	6 cut(s)	79, 1186, 2173, 2506, 2700, 2758
BspEI	TCCGGA	2 cut(s)	75, 2647
BspFNI	CGCG	1 cut(s)	3099
BspHI	TCATGA	2 cut(s)	129, 1854
BspLI	GGNNCC	5 cut(s)	204, 1983, 1984, 2041, 2441
BspMAI	CTGCAG	2 cut(s)	1787, 2459
BspOI	GCTAGC	1 cut(s)	483
BspPI	GGATC	8 cut(s)	272, 453, 994, 1445, 1598, 1736, 1848, 2859
BspQI	GCTCTTC	1 cut(s)	1255
BsrDI	GCAATG	6 cut(s)	569, 841, 1940, 2161, 2327, 2823
BsrGI	TGTACA	1 cut(s)	372
BsrI	ACTGG	7 cut(s)	143, 437, 1111, 1152, 1293, 2350, 3181
BssECI	CCNNGG	7 cut(s)	285, 1669, 2036, 2253, 2309, 3052, 3131
BssNAI	GTATAC	3 cut(s)	359, 2267, 2932
BssNI	GRCGYC	1 cut(s)	2619
BssSI	CACGAG	3 cut(s)	86, 171, 2240
BssT1I	CCWWGG	2 cut(s)	285, 1669
Bst1107I	GTATAC	3 cut(s)	359, 2267, 2932
Bst2BI	CACGAG	3 cut(s)	86, 171, 2240
Bst2UI	CCWGG	2 cut(s)	2037, 2984
Bst4CI	ACNGT	7 cut(s)	293, 356, 471, 1259, 1662, 1832, 2929
Bst6I	CTCTTC	3 cut(s)	647, 1255, 3193
BstACI	GRCGYC	1 cut(s)	2619
BstAPI	GCANNNNNTGC	2 cut(s)	1791, 3032
BstAUI	TGTACA	1 cut(s)	372
BstBAI	YACGTR	2 cut(s)	672, 2001
BstC8I	GCNNGC	7 cut(s)	477, 481, 1475, 1810, 2031, 2191, 3199
BstDSI	CCRYGG	3 cut(s)	1669, 2253, 2309
BstENI	CCTNNNNNAGG	1 cut(s)	2633
BstF5I	GGATG	7 cut(s)	769, 1289, 1807, 2508, 2609, 2656, 2693
BstFNI	CGCG	1 cut(s)	3099
BstH2I	RGCGCY	2 cut(s)	1062, 2233
BstHHI	GCGC	3 cut(s)	873, 1061, 2232
BstMAI	GTCTC	3 cut(s)	28, 270, 661
BstMWI	GCNNNNNNNGC	7 cut(s)	195, 1791, 2039, 2463, 2715, 2813, 3032
BstNI	CCWGG	2 cut(s)	2037, 2984
BstNSI	RCATGY	4 cut(s)	479, 665, 1139, 2193
BstSCI	CCNGG	4 cut(s)	2035, 2982, 3052, 3130
BstSFI	CTRYAG	4 cut(s)	1258, 1783, 2455, 2490
BstSLI	GKGCMC	1 cut(s)	1986
BstUI	CGCG	1 cut(s)	3099
BstV1I	GCAGC	6 cut(s)	808, 818, 845, 855, 1543, 2239
BstV2I	GAAGAC	2 cut(s)	996, 1815
BstX2I	RGATCY	3 cut(s)	277, 637, 1590
BstYI	RGATCY	3 cut(s)	277, 637, 1590
BstZ17I	GTATAC	3 cut(s)	359, 2267, 2932
BsuI	GTATCC	1 cut(s)	544
BsuRI	GGCC	3 cut(s)	750, 1984, 2042
BtgI	CCRYGG	3 cut(s)	1669, 2253, 2309
BtrI	CACGTC	1 cut(s)	2462
BtsCI	GGATG	7 cut(s)	769, 1289, 1807, 2508, 2609, 2656, 2693
BtsIMutI	CAGTG	3 cut(s)	371, 652, 1300
Cac8I	GCNNGC	7 cut(s)	477, 481, 1475, 1810, 2031, 2191, 3199
CaiI	CAGNNNCTG	4 cut(s)	50, 1556, 1791, 2375
CciI	TCATGA	2 cut(s)	129, 1854
CfoI	GCGC	3 cut(s)	873, 1061, 2232
Cfr13I	GGNCC	7 cut(s)	272, 289, 748, 1757, 1982, 1983, 2040
CseI	GACGC	2 cut(s)	56, 3175
Csp6I	GTAC	6 cut(s)	373, 1206, 1535, 2127, 2174, 2859
CviQI	GTAC	6 cut(s)	373, 1206, 1535, 2127, 2174, 2859
DraIII	CACNNNGTG	1 cut(s)	672
DriI	GACNNNNNGTC	1 cut(s)	1261
Eam1104I	CTCTTC	3 cut(s)	647, 1255, 3193
Eam1105I	GACNNNNNGTC	1 cut(s)	1261
EarI	CTCTTC	3 cut(s)	647, 1255, 3193
EciI	GGCGGA	1 cut(s)	1770
Eco130I	CCWWGG	2 cut(s)	285, 1669
Eco24I	GRGCYC	3 cut(s)	1986, 2556, 3139
Eco32I	GATATC	2 cut(s)	1713, 3145
Eco47I	GGWCC	3 cut(s)	272, 289, 1757
Eco47III	AGCGCT	1 cut(s)	1060
Eco57I	CTGAAG	5 cut(s)	347, 628, 1236, 1989, 2346
Eco72I	CACGTG	1 cut(s)	672
EcoNI	CCTNNNNNAGG	1 cut(s)	2633
EcoO109I	RGGNCCY	2 cut(s)	748, 1982
EcoRII	CCWGG	2 cut(s)	2035, 2982
EcoRV	GATATC	2 cut(s)	1713, 3145
EcoT14I	CCWWGG	2 cut(s)	285, 1669
EcoT22I	ATGCAT	3 cut(s)	914, 2720, 3090
EcoT38I	GRGCYC	3 cut(s)	1986, 2556, 3139
ErhI	CCWWGG	2 cut(s)	285, 1669
FalI	AAGNNNNNCTT	2 cut(s)	1094, 1126
FaqI	GGGAC	3 cut(s)	1790, 1802, 3178
FauI	CCCGC	3 cut(s)	322, 1645, 1972
FbaI	TGATCA	1 cut(s)	3013
FblI	GTMKAC	4 cut(s)	7, 358, 2266, 2931
Fnu4HI	GCNGC	6 cut(s)	797, 832, 859, 869, 1557, 2228
FokI	GGATG	7 cut(s)	776, 1276, 1814, 2495, 2596, 2663, 2680
FriOI	GRGCYC	3 cut(s)	1986, 2556, 3139
Fsp4HI	GCNGC	6 cut(s)	797, 832, 859, 869, 1557, 2228
FspBI	CTAG	8 cut(s)	480, 768, 840, 1212, 1917, 2315, 2838, 3202
FspI	TGCGCA	1 cut(s)	872
GlaI	GCGC	3 cut(s)	872, 1060, 2231
GluI	GCNGC	6 cut(s)	797, 832, 859, 869, 1557, 2228
GsuI	CTGGAG	2 cut(s)	630, 2131
HaeII	RGCGCY	2 cut(s)	1062, 2233
HaeIII	GGCC	3 cut(s)	750, 1984, 2042
HapII	CCGG	6 cut(s)	76, 223, 884, 2648, 3054, 3131
HgaI	GACGC	2 cut(s)	56, 3175
HhaI	GCGC	3 cut(s)	873, 1061, 2232
Hin1I	GRCGYC	1 cut(s)	2619
Hin6I	GCGC	3 cut(s)	871, 1059, 2230
HinP1I	GCGC	3 cut(s)	871, 1059, 2230
HincII	GTYRAC	1 cut(s)	1066
HindII	GTYRAC	1 cut(s)	1066
HindIII	AAGCTT	2 cut(s)	699, 1170
HpaI	GTTAAC	1 cut(s)	1066
HpaII	CCGG	6 cut(s)	76, 223, 884, 2648, 3054, 3131
HphI	GGTGA	5 cut(s)	658, 940, 2024, 2980, 3082
Hpy166II	GTNNAC	8 cut(s)	8, 166, 359, 1066, 1154, 2143, 2267, 2932
Hpy8I	GTNNAC	8 cut(s)	8, 166, 359, 1066, 1154, 2143, 2267, 2932
Hpy99I	CGWCG	2 cut(s)	253, 297
HpyAV	CCTTC	8 cut(s)	389, 929, 1343, 2212, 2313, 2629, 2968, 3146
HpyCH4III	ACNGT	7 cut(s)	293, 356, 471, 1259, 1662, 1832, 2929
HpyCH4IV	ACGT	9 cut(s)	248, 521, 671, 1156, 2000, 2380, 2461, 2619, 2664
HpyF10VI	GCNNNNNNNGC	7 cut(s)	195, 1791, 2039, 2463, 2715, 2813, 3032
HpySE526I	ACGT	9 cut(s)	248, 521, 671, 1156, 2000, 2380, 2461, 2619, 2664
Hsp92I	GRCGYC	1 cut(s)	2619
HspAI	GCGC	3 cut(s)	871, 1059, 2230
Kpn2I	TCCGGA	2 cut(s)	75, 2647
Ksp22I	TGATCA	1 cut(s)	3013
KspAI	GTTAAC	1 cut(s)	1066
LguI	GCTCTTC	1 cut(s)	1255
LmnI	GCTCC	4 cut(s)	793, 1966, 2445, 2812
Lsp1109I	GCAGC	6 cut(s)	808, 818, 845, 855, 1543, 2239
MaeI	CTAG	8 cut(s)	480, 768, 840, 1212, 1917, 2315, 2838, 3202
MaeII	ACGT	9 cut(s)	248, 521, 671, 1156, 2000, 2380, 2461, 2619, 2664
MaeIII	GTNAC	7 cut(s)	100, 173, 664, 1566, 1926, 2537, 2759
MflI	RGATCY	3 cut(s)	277, 637, 1590
MhlI	GDGCHC	5 cut(s)	677, 1810, 1986, 2556, 3139
MlyI	GAGTC	6 cut(s)	621, 1010, 2138, 2400, 2421, 2828
MmeI	TCCRAC	5 cut(s)	231, 305, 504, 510, 741
Mph1103I	ATGCAT	3 cut(s)	914, 2720, 3090
MroI	TCCGGA	2 cut(s)	75, 2647
MroXI	GAANNNNTTC	3 cut(s)	2531, 3047, 3156
MslI	CAYNNNNRTG	1 cut(s)	1817
MspA1I	CMGCKG	2 cut(s)	317, 1071
MspI	CCGG	6 cut(s)	76, 223, 884, 2648, 3054, 3131
MspR9I	CCNGG	4 cut(s)	2037, 2984, 3054, 3132
Mva1269I	GAATGC	4 cut(s)	1236, 1456, 1513, 2720
MvaI	CCWGG	2 cut(s)	2037, 2984
MvnI	CGCG	1 cut(s)	3099
MwoI	GCNNNNNNNGC	7 cut(s)	195, 1791, 2039, 2463, 2715, 2813, 3032
NciI	CCSGG	2 cut(s)	3054, 3132
NcoI	CCATGG	1 cut(s)	1669
NheI	GCTAGC	1 cut(s)	479
NlaIV	GGNNCC	5 cut(s)	204, 1983, 1984, 2041, 2441
NmeAIII	GCCGAG	1 cut(s)	436
NmuCI	GTSAC	4 cut(s)	173, 664, 1566, 2537
NsbI	TGCGCA	1 cut(s)	872
NsiI	ATGCAT	3 cut(s)	914, 2720, 3090
NspI	RCATGY	4 cut(s)	479, 665, 1139, 2193
PaeI	GCATGC	2 cut(s)	479, 2193
PagI	TCATGA	2 cut(s)	129, 1854
PciI	ACATGT	1 cut(s)	1135
PciSI	GCTCTTC	1 cut(s)	1255
PctI	GAATGC	4 cut(s)	1236, 1456, 1513, 2720
PdmI	GAANNNNTTC	3 cut(s)	2531, 3047, 3156
PflMI	CCANNNNNTGG	1 cut(s)	1602
PkrI	GCNGC	6 cut(s)	798, 833, 860, 870, 1558, 2229
PleI	GAGTC	6 cut(s)	620, 1009, 2138, 2399, 2421, 2828
PmaCI	CACGTG	1 cut(s)	672
PmlI	CACGTG	1 cut(s)	672
PpsI	GAGTC	6 cut(s)	620, 1009, 2138, 2399, 2421, 2828
Ppu21I	YACGTR	2 cut(s)	672, 2001
PscI	ACATGT	1 cut(s)	1135
PshBI	ATTAAT	1 cut(s)	2397
Psp6I	CCWGG	2 cut(s)	2035, 2982
PspCI	CACGTG	1 cut(s)	672
PspGI	CCWGG	2 cut(s)	2035, 2982
PspN4I	GGNNCC	5 cut(s)	204, 1983, 1984, 2041, 2441
PspOMI	GGGCCC	1 cut(s)	1982
PspPI	GGNCC	7 cut(s)	272, 289, 748, 1757, 1982, 1983, 2040
PstI	CTGCAG	2 cut(s)	1787, 2459
PstNI	CAGNNNCTG	4 cut(s)	50, 1556, 1791, 2375
PsuI	RGATCY	3 cut(s)	277, 637, 1590
RsaI	GTAC	6 cut(s)	374, 1207, 1536, 2128, 2175, 2860
RsaNI	GTAC	6 cut(s)	373, 1206, 1535, 2127, 2174, 2859
RseI	CAYNNNNRTG	1 cut(s)	1817
SapI	GCTCTTC	1 cut(s)	1255
SatI	GCNGC	6 cut(s)	797, 832, 859, 869, 1557, 2228
Sau96I	GGNCC	7 cut(s)	272, 289, 748, 1757, 1982, 1983, 2040
SchI	GAGTC	6 cut(s)	621, 1010, 2138, 2400, 2421, 2828
ScrFI	CCNGG	4 cut(s)	2037, 2984, 3054, 3132
SduI	GDGCHC	5 cut(s)	677, 1810, 1986, 2556, 3139
SfcI	CTRYAG	4 cut(s)	1258, 1783, 2455, 2490
SinI	GGWCC	3 cut(s)	272, 289, 1757
SmiMI	CAYNNNNRTG	1 cut(s)	1817
SmlI	CTYRAG	6 cut(s)	587, 731, 969, 1463, 2630, 3138
SmoI	CTYRAG	6 cut(s)	587, 731, 969, 1463, 2630, 3138
SphI	GCATGC	2 cut(s)	479, 2193
SsiI	CCGC	8 cut(s)	209, 315, 1071, 1638, 1708, 1755, 1979, 3097
SspI	AATATT	3 cut(s)	818, 1583, 2531
SspMI	CTAG	8 cut(s)	480, 768, 840, 1212, 1917, 2315, 2838, 3202
StyD4I	CCNGG	4 cut(s)	2035, 2982, 3052, 3130
StyI	CCWWGG	2 cut(s)	285, 1669
TaaI	ACNGT	7 cut(s)	293, 356, 471, 1259, 1662, 1832, 2929
TaiI	ACGT	9 cut(s)	251, 524, 674, 1159, 2003, 2383, 2464, 2622, 2667
TaqI	TCGA	5 cut(s)	989, 1843, 2196, 3147, 3160
TatI	WGTACW	2 cut(s)	372, 2126
TscAI	CASTG	3 cut(s)	371, 652, 1300
TseFI	GTSAC	4 cut(s)	173, 664, 1566, 2537
TseI	GCWGC	6 cut(s)	796, 831, 858, 868, 1556, 2227
Tsp45I	GTSAC	4 cut(s)	173, 664, 1566, 2537
TspGWI	ACGGA	3 cut(s)	1552, 1914, 2298
TspRI	CASTG	3 cut(s)	371, 652, 1300
Van91I	CCANNNNNTGG	1 cut(s)	1602
VpaK11BI	GGWCC	3 cut(s)	272, 289, 1757
VspI	ATTAAT	1 cut(s)	2397
XagI	CCTNNNNNAGG	1 cut(s)	2633
XapI	RAATTY	3 cut(s)	81, 1121, 2065
XbaI	TCTAGA	1 cut(s)	1916
XceI	RCATGY	4 cut(s)	479, 665, 1139, 2193
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2067
XmiI	GTMKAC	4 cut(s)	7, 358, 2266, 2931
XmnI	GAANNNNTTC	3 cut(s)	2531, 3047, 3156
XspI	CTAG	8 cut(s)	480, 768, 840, 1212, 1917, 2315, 2838, 3202
ZraI	GACGTC	1 cut(s)	2620
Zsp2I	ATGCAT	3 cut(s)	914, 2720, 3090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.