Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0010285

Physical Location & Seq

Genomic Coordinates Reverse (-)

9539421 .. 9544650

Gene Structure 5230 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g11240.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2880 bp

ATGAACAAGTCCTTCCGTGAAGGCATCTTCTTGGTTGAACCTGAGGTTTTGGAACAGCAGCCAGTGTTGAATCAGCTTTCTCGGCTTTTTGCTCAGTTGCATGCCAGTAAATTGGCTTTTATAGACTCATCTCCATTTGTAAAAACACTGGAGTTAGATAATGGAGTTCAACAGGACAGTCATGAGTTTCTGACCTTACTTCTTTCTTTGCTTGAACGTTGTCTGAGCAACTCTAAAGTTTCAAAGGCAAAATCTATTGTTCAAGATCTTTTCCGTGGAAGTGTATCACATGTTACTAGGTGTTCACAATGTGGAAAAGACTCTGAAGCTTCTTCAAACATGGAAGACTTCTATGAGCTGGAGTTGAATGTGAAGGGTTTGAAAAGTTTGGGTGAGAGTTTAGATGATTACCTTAGTGTTGAAGAGCTCCATGGAGAGAATCAATATTTTTGTGAGTCTTGTAAATCAAGAGTCGATGCTACTCGAAGCATCAAGTTGCGCACATTGCCTGAGGTTCTGAACTTTCAGCTTAAGCGATATGTTTTCCTTCCAAAGACAACAACCAAGAAGAAAATTACTTCTGCATTTAGTTTTCCTGGAGTACTTGATATGAGGAAGAGGCTCTCTGACCCGTCTCAGGGTGAATCAGTATATGATTTGTCAGCTGTGCTGATTCACAAGGGAACTGCAGTTAACAGTGGCCACTATGTAGCGCATGTCAAGGATGAGAAGACAGGGCAATGGTGGGAATTTGACGATGAGCAGGTCTCAAACTTGGGTTCTCATCCGTTTGGAGAAGGGGCTTCAAATTCCAATACCAAGCCTGTTAAACTCGAACCTGTTGATCCATCTTGCATGGAACAAAAGAATGCTATTTCAAATGGTGATAATGTGGATGTCATTCACCAACAACCTTCAGAATCTATTACCAGTCATGTAGAGACGTTTTCATGTGCTGATGCATATATGCTGATGTATAGTCTCGATCATTCCCGGAAGGGTGAAGAGAAAGTGCATGTGGAATGTAATGCCAATAATAGGAAGATACAAGGTGATACTGTTTGTAGTTCTCTTCCATCTCATCTTTGTGATGAGATTGAAAGCTTTAATGCATCATATCTTGATGCTTGTGAGCAATACAAATTTAAGAAAGAAGAAGAGATGAATAATATCACAGAACGAAGACAGGAAGTGCGTTCGATTTTGTCGGAAGCTCCTGTTCAACAACTTGAGGAAACCTTTTTTTGGATATCAACGGACTGGCTTCGTCAGTGGGCTGATAACATGATTTCACTTGCTCTTGACAACACATCCATCCAATGTTCGCATGGAAAAGTTCCAGTTTCAAAGGTTGGCCACATGAAAAGGTTGTCAGTCAAAGCATGGACCAAACTGTTCTCTAAGTATAAAGGGGGGCCAGAACTGGCCAATGATGACTACTGCATGGTTTGCCTTATTGATGGTGCTCGAAATGTAGTCTGTGCTGACAGTTATAGGGATAGAAGAATAATAATGAAGCAAGTTGCGGAGGATGCACTTGCAGCGAAGTGTTCAGGTGGAATGTATTATGTTTCTAAAGCATGGTTACAACAGTGGCTTAAAAGAAAAATTCTTGATGCTCCAGCTGAAGCCGATGCCGGACCAACAGCTTCAATTAGGTGTCCTCATGGGCAACTTATGCCTGAACACGCCACTGGTGCTAAGAGATTGCTTGTTCCTGAGAATCTATGGCTCTTCCTTTATGAAGATGCTTTAACAGTGAAGCCTGATGATCATTTGGGTTGTTTTCCATTTCCTTCTGACTCTGCACAATGTTCCCAATGCAGTGATGAACTATCTGAAGTTGCATGTATGGAGGATTCTTTAAGATTGGTGAGGCTCAAACAGCGCCAGACTCATGAGAAACTACTTACGGGAAAAAGTGTGCCGCTTTCTCTGCATTGCAAGTATTACTTGATACCCAATTCTTGGCTTTCAAAGTGGAAAAACTACATTACTGCAAATGGAAAGAATATTTCCTCAGTGGAGAAACCTGAAACATTAGAGGGCATCATGGATTTGCTAAAGTGTGAAAAGCATTCACAACTTCTAGAAAGGCCTGTTGATCTGGTCCAGAAACGTGGTCTGATTTCCCAGAAGTCTCCTGTGGATGGGTTAATACTCATTACTGAGAATGACTGGAAGTCCTTCTGTGAGGAATGGGGTGGTATTGAAGAGAAAGGAATATCTGCTGAAATAGAGTTAAGTAGTACTGAAGAAAATAATTTGGCAGGGTCTTGCGAAGAGATGCCAATGGGCGAGGAGGACCTCAGTACTCCAAATCACGTAAATGGTGAAGTTGAGTCTAGACGACTTGTGATTAAGACTTGTCCTGAGATATGTGAGGACTGCATTGGAGAAAGAGAAAGCAGGGAATTAATGCGGAAGCTTGATTATTGCAACGAGGACATATATGTATACTTTGTACATGGCAAGGAAGCTCCAAAGTCGATTCTAAAACCATCTGATACAAATTTCGATCCAGATCGGCGAGTTTCCAAGCGCTCTCGGAGGACAAAAACTGTGATCGATCAAATAAGCTTAAAAGTCTCTGGTTCCACAACCATATACCAGTTGAAAATGATGATATGGGAATCTTTTGGGATTGTTAAGGAAAACCAGGGACTTCACAAAGGTACTCGGATAATTGAGGACGAATCTGCTACTCTTGCGGACATGAATATCTTCCCTGGTGATAGACTTTGGGTGAATGATTCAGAAATTCATGAGAACCGAGATATTGCTGATGAGCTATCTGACCAGAAAATGGATGCGCAACACACTGAAGAGGGGTTTCGCGGGACGCTGTTGACCACAAATGTTTCGTCCCAAGTTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0007275 GO:0008150 GO:0009791 GO:0010154 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUSP UCH

Protein Analysis

960

Amino Acids

108.4

Weight (kDa)

5.37

Isoelectric Point (pI)

48.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49600 AT3G49600 AT3G49600
fragaria_vesca	FvH4_2g30650 FvH4_2g30650 FvH4_2g30650 FvH4_2g30650
malus_domestica	MD08G1133600.v1.1 MD15G1110500.v1.1
prunus_persica	Prupe.1G462800_v2.0.a1
pyrus_communis	pycom08g11240 pycom15g10080
rosa_chinensis	RchiOBHm_Chr6g0312261
rosa_laevigata	RLG00000010338
rosa_roxburghii	Rroxscaffold_7G00156900
rosa_rugosa	Rorug06G0394400
rosa_samantha	Rh6AG511600 Rh6BG522700 Rh6CG528400 Rh6DG513800
rosa_wichuraiana	Rw6G044500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	500, 2814
Acc36I	ACCTGC	1 cut(s)	754
AccB7I	CCANNNNNTGG	2 cut(s)	1968, 2806
AccI	GTMKAC	1 cut(s)	2457
AccII	CGCG	1 cut(s)	2838
AciI	CCGC	5 cut(s)	1526, 1928, 2422, 2711, 2838
AclI	AACGTT	1 cut(s)	217
AclWI	GGATC	2 cut(s)	839, 2513
AcoI	YGGCCR	3 cut(s)	700, 1354, 1425
AcsI	RAATTY	6 cut(s)	749, 808, 1142, 1608, 2512, 2760
AcuI	CTGAAG	6 cut(s)	345, 900, 1647, 1860, 2274, 2844
AdeI	CACNNNGTG	1 cut(s)	311
AfaI	GTAC	5 cut(s)	603, 2251, 2314, 2466, 2677
AfeI	AGCGCT	1 cut(s)	2543
AfiI	CCNNNNNNNGG	7 cut(s)	637, 638, 1038, 1245, 1968, 2150, 2806
AflII	CTTAAG	1 cut(s)	530
AflIII	ACRYGT	1 cut(s)	289
AhdI	GACNNNNNGTC	1 cut(s)	2182
AjnI	CCWGG	3 cut(s)	595, 2658, 2728
Alw21I	GWGCWC	2 cut(s)	429, 1468
Alw26I	GTCTC	6 cut(s)	639, 772, 935, 986, 2145, 2593
AlwI	GGATC	2 cut(s)	839, 2513
Aor51HI	AGCGCT	1 cut(s)	2543
AoxI	GGCC	5 cut(s)	700, 1354, 1415, 1425, 2096
ApeKI	GCWGC	2 cut(s)	58, 1541
ApoI	RAATTY	6 cut(s)	749, 808, 1142, 1608, 2512, 2760
ArsI	GACNNNNNNTTYG	1 cut(s)	2849
AseI	ATTAAT	1 cut(s)	2417
Asp700I	GAANNNNTTC	2 cut(s)	2186, 2723
AspLEI	GCGC	5 cut(s)	501, 715, 1890, 2544, 2815
AspS9I	GGNCC	5 cut(s)	1386, 1415, 1640, 2110, 2305
AsuC2I	CCSGG	1 cut(s)	994
AvaII	GGWCC	4 cut(s)	1386, 1640, 2110, 2305
AxyI	CCTNAGG	2 cut(s)	42, 510
BalI	TGGCCA	3 cut(s)	702, 1356, 1427
BanII	GRGCYC	1 cut(s)	429
BbsI	GAAGAC	3 cut(s)	351, 737, 1189
Bbv12I	GWGCWC	2 cut(s)	429, 1468
BbvI	GCAGC	2 cut(s)	70, 1553
BccI	CCATC	6 cut(s)	856, 1084, 1322, 1454, 2144, 2509
BciT130I	CCWGG	3 cut(s)	597, 2660, 2730
BclI	TGATCA	1 cut(s)	1771
BcnI	CCSGG	1 cut(s)	994
BcoDI	GTCTC	6 cut(s)	639, 772, 935, 986, 2145, 2593
BfaI	CTAG	3 cut(s)	297, 2090, 2346
BfmI	CTRYAG	1 cut(s)	687
BfoI	RGCGCY	2 cut(s)	1891, 2545
BfrI	CTTAAG	1 cut(s)	530
BfuAI	ACCTGC	1 cut(s)	754
BglII	AGATCT	1 cut(s)	265
BisI	GCNGC	3 cut(s)	59, 1542, 1928
BlsI	GCNGC	3 cut(s)	60, 1543, 1929
BmcAI	AGTACT	3 cut(s)	603, 2251, 2314
Bme1390I	CCNGG	4 cut(s)	597, 994, 2660, 2730
Bme18I	GGWCC	4 cut(s)	1386, 1640, 2110, 2305
BmeRI	GACNNNNNGTC	1 cut(s)	2182
BmgT120I	GGNCC	5 cut(s)	1386, 1415, 1640, 2110, 2305
BmiI	GGNNCC	2 cut(s)	1416, 2596
BmrFI	CCNGG	4 cut(s)	597, 994, 2660, 2730
BpiI	GAAGAC	3 cut(s)	351, 737, 1189
BplI	GAGNNNNNCTC	2 cut(s)	752, 784
BpmI	CTGGAG	4 cut(s)	170, 380, 618, 1605
BpuEI	CTTGAG	1 cut(s)	1250
BpuMI	CCSGG	1 cut(s)	994
Bsa29I	ATCGAT	1 cut(s)	2568
BsaAI	YACGTR	1 cut(s)	2326
BsaBI	GATNNNNATC	1 cut(s)	2523
BsaI	GGTCTC	1 cut(s)	772
BsaJI	CCNNGG	4 cut(s)	274, 430, 2659, 2728
Bsc4I	CCNNNNNNNGG	7 cut(s)	637, 638, 1038, 1245, 1968, 2150, 2806
Bse21I	CCTNAGG	2 cut(s)	42, 510
Bse3DI	GCAATG	3 cut(s)	503, 746, 1939
Bse8I	GATNNNNATC	1 cut(s)	2523
BseBI	CCWGG	3 cut(s)	597, 2660, 2730
BseCI	ATCGAT	1 cut(s)	2568
BseDI	CCNNGG	4 cut(s)	274, 430, 2659, 2728
BseGI	GGATG	8 cut(s)	730, 784, 901, 1310, 1314, 1537, 2155, 2815
BseJI	GATNNNNATC	1 cut(s)	2523
BseLI	CCNNNNNNNGG	7 cut(s)	637, 638, 1038, 1245, 1968, 2150, 2806
BseMI	GCAATG	3 cut(s)	503, 746, 1939
BseRI	GAGGAG	1 cut(s)	2315
BseXI	GCAGC	2 cut(s)	70, 1553
BsgI	GTGCAG	1 cut(s)	1791
Bsh1236I	CGCG	1 cut(s)	2838
BshFI	GGCC	5 cut(s)	702, 1356, 1417, 1427, 2098
BshVI	ATCGAT	1 cut(s)	2568
BsiHKAI	GWGCWC	2 cut(s)	429, 1468
BsiSI	CCGG	2 cut(s)	994, 1638
BslFI	GGGAC	3 cut(s)	2676, 2851, 2854
BslI	CCNNNNNNNGG	7 cut(s)	637, 638, 1038, 1245, 1968, 2150, 2806
BsmAI	GTCTC	6 cut(s)	639, 772, 935, 986, 2145, 2593
BsmBI	CGTCTC	2 cut(s)	639, 935
BsmFI	GGGAC	3 cut(s)	2676, 2851, 2854
BsmI	GAATGC	2 cut(s)	874, 2077
BsnI	GGCC	5 cut(s)	702, 1356, 1417, 1427, 2098
Bso31I	GGTCTC	1 cut(s)	772
Bsp1286I	GDGCHC	2 cut(s)	429, 1468
Bsp1407I	TGTACA	1 cut(s)	2464
Bsp143I	GATC	9 cut(s)	265, 844, 985, 1771, 2104, 2518, 2524, 2565, 2569
Bsp19I	CCATGG	1 cut(s)	430
BspACI	CCGC	5 cut(s)	1526, 1928, 2422, 2711, 2838
BspANI	GGCC	5 cut(s)	702, 1356, 1417, 1427, 2098
BspDI	ATCGAT	1 cut(s)	2568
BspFNI	CGCG	1 cut(s)	2838
BspHI	TCATGA	3 cut(s)	181, 1897, 2764
BspLI	GGNNCC	2 cut(s)	1416, 2596
BspMAI	CTGCAG	1 cut(s)	691
BspMI	ACCTGC	1 cut(s)	754
BspPI	GGATC	2 cut(s)	839, 2513
BspQI	GCTCTTC	2 cut(s)	417, 1739
BspTI	CTTAAG	1 cut(s)	530
BspTNI	GGTCTC	1 cut(s)	772
BsrDI	GCAATG	3 cut(s)	503, 746, 1939
BsrGI	TGTACA	1 cut(s)	2464
BssECI	CCNNGG	4 cut(s)	274, 430, 2659, 2728
BssMI	GATC	9 cut(s)	265, 844, 985, 1771, 2104, 2518, 2524, 2565, 2569
BssNAI	GTATAC	1 cut(s)	2458
BssT1I	CCWWGG	1 cut(s)	430
Bst1107I	GTATAC	1 cut(s)	2458
Bst2UI	CCWGG	3 cut(s)	597, 2660, 2730
Bst4CI	ACNGT	8 cut(s)	179, 698, 1060, 1395, 1490, 1593, 1759, 2563
Bst6I	CTCTTC	9 cut(s)	417, 611, 999, 1077, 1152, 1739, 2208, 2277, 2820
BstAFI	CTTAAG	1 cut(s)	530
BstAPI	GCANNNNNTGC	2 cut(s)	1449, 1678
BstAUI	TGTACA	1 cut(s)	2464
BstBAI	YACGTR	1 cut(s)	2326
BstC8I	GCNNGC	1 cut(s)	102
BstDSI	CCRYGG	2 cut(s)	274, 430
BstF5I	GGATG	8 cut(s)	730, 784, 901, 1310, 1314, 1537, 2155, 2815
BstFNI	CGCG	1 cut(s)	2838
BstH2I	RGCGCY	2 cut(s)	1891, 2545
BstHHI	GCGC	5 cut(s)	501, 715, 1890, 2544, 2815
BstKTI	GATC	9 cut(s)	268, 847, 988, 1774, 2107, 2521, 2527, 2568, 2572
BstMAI	GTCTC	6 cut(s)	639, 772, 935, 986, 2145, 2593
BstMBI	GATC	9 cut(s)	265, 844, 985, 1771, 2104, 2518, 2524, 2565, 2569
BstNI	CCWGG	3 cut(s)	597, 2660, 2730
BstNSI	RCATGY	5 cut(s)	104, 293, 719, 1019, 1851
BstSCI	CCNGG	4 cut(s)	595, 992, 2658, 2728
BstSFI	CTRYAG	1 cut(s)	687
BstUI	CGCG	1 cut(s)	2838
BstV1I	GCAGC	2 cut(s)	70, 1553
BstV2I	GAAGAC	3 cut(s)	351, 737, 1189
BstX2I	RGATCY	1 cut(s)	265
BstXI	CCANNNNNNTGG	2 cut(s)	112, 2120
BstYI	RGATCY	1 cut(s)	265
BstZ17I	GTATAC	1 cut(s)	2458
Bsu15I	ATCGAT	1 cut(s)	2568
Bsu36I	CCTNAGG	2 cut(s)	42, 510
BsuRI	GGCC	5 cut(s)	702, 1356, 1417, 1427, 2098
BsuTUI	ATCGAT	1 cut(s)	2568
BtgI	CCRYGG	2 cut(s)	274, 430
BtsCI	GGATG	8 cut(s)	730, 784, 901, 1310, 1314, 1537, 2155, 2815
BtsI	GCAGTG	1 cut(s)	1831
BveI	ACCTGC	1 cut(s)	754
Cac8I	GCNNGC	1 cut(s)	102
CciI	TCATGA	3 cut(s)	181, 1897, 2764
CfoI	GCGC	5 cut(s)	501, 715, 1890, 2544, 2815
Cfr13I	GGNCC	5 cut(s)	1386, 1415, 1640, 2110, 2305
ClaI	ATCGAT	1 cut(s)	2568
CseI	GACGC	1 cut(s)	2851
Csp6I	GTAC	5 cut(s)	602, 2250, 2313, 2465, 2676
CviQI	GTAC	5 cut(s)	602, 2250, 2313, 2465, 2676
DpnI	GATC	9 cut(s)	267, 846, 987, 1773, 2106, 2520, 2526, 2567, 2571
DpnII	GATC	9 cut(s)	265, 844, 985, 1771, 2104, 2518, 2524, 2565, 2569
DraIII	CACNNNGTG	1 cut(s)	311
DriI	GACNNNNNGTC	1 cut(s)	2182
EaeI	YGGCCR	3 cut(s)	700, 1354, 1425
Eam1104I	CTCTTC	9 cut(s)	417, 611, 999, 1077, 1152, 1739, 2208, 2277, 2820
Eam1105I	GACNNNNNGTC	1 cut(s)	2182
EarI	CTCTTC	9 cut(s)	417, 611, 999, 1077, 1152, 1739, 2208, 2277, 2820
Ecl136II	GAGCTC	1 cut(s)	427
Eco130I	CCWWGG	1 cut(s)	430
Eco147I	AGGCCT	1 cut(s)	2098
Eco24I	GRGCYC	1 cut(s)	429
Eco31I	GGTCTC	1 cut(s)	772
Eco32I	GATATC	1 cut(s)	1251
Eco47I	GGWCC	4 cut(s)	1386, 1640, 2110, 2305
Eco47III	AGCGCT	1 cut(s)	2543
Eco53kI	GAGCTC	1 cut(s)	427
Eco57I	CTGAAG	6 cut(s)	345, 900, 1647, 1860, 2274, 2844
Eco81I	CCTNAGG	2 cut(s)	42, 510
EcoICRI	GAGCTC	1 cut(s)	427
EcoO109I	RGGNCCY	1 cut(s)	2305
EcoRII	CCWGG	3 cut(s)	595, 2658, 2728
EcoRV	GATATC	1 cut(s)	1251
EcoT14I	CCWWGG	1 cut(s)	430
EcoT22I	ATGCAT	2 cut(s)	964, 1114
EcoT38I	GRGCYC	1 cut(s)	429
ErhI	CCWWGG	1 cut(s)	430
Esp3I	CGTCTC	2 cut(s)	639, 935
FalI	AAGNNNNNCTT	2 cut(s)	1937, 1969
FaqI	GGGAC	3 cut(s)	2676, 2851, 2854
FauI	CCCGC	1 cut(s)	2831
FbaI	TGATCA	1 cut(s)	1771
FblI	GTMKAC	1 cut(s)	2457
Fnu4HI	GCNGC	3 cut(s)	59, 1542, 1928
FokI	GGATG	8 cut(s)	737, 771, 908, 1297, 1301, 1544, 2162, 2822
FriOI	GRGCYC	1 cut(s)	429
Fsp4HI	GCNGC	3 cut(s)	59, 1542, 1928
FspBI	CTAG	3 cut(s)	297, 2090, 2346
FspI	TGCGCA	2 cut(s)	500, 2814
GlaI	GCGC	5 cut(s)	500, 714, 1889, 2543, 2814
GluI	GCNGC	3 cut(s)	59, 1542, 1928
GsuI	CTGGAG	4 cut(s)	170, 380, 618, 1605
HaeII	RGCGCY	2 cut(s)	1891, 2545
HaeIII	GGCC	5 cut(s)	702, 1356, 1417, 1427, 2098
HapII	CCGG	2 cut(s)	994, 1638
HgaI	GACGC	1 cut(s)	2851
HhaI	GCGC	5 cut(s)	501, 715, 1890, 2544, 2815
Hin6I	GCGC	5 cut(s)	499, 713, 1888, 2542, 2813
HinP1I	GCGC	5 cut(s)	499, 713, 1888, 2542, 2813
HincII	GTYRAC	2 cut(s)	694, 2850
HindII	GTYRAC	2 cut(s)	694, 2850
HindIII	AAGCTT	4 cut(s)	327, 1102, 2426, 2578
HpaI	GTTAAC	1 cut(s)	694
HpaII	CCGG	2 cut(s)	994, 1638
Hpy166II	GTNNAC	4 cut(s)	305, 694, 2458, 2850
Hpy8I	GTNNAC	4 cut(s)	305, 694, 2458, 2850
HpyAV	CCTTC	9 cut(s)	14, 22, 367, 557, 791, 924, 991, 1806, 2197
HpyCH4III	ACNGT	8 cut(s)	179, 698, 1060, 1395, 1490, 1593, 1759, 2563
HpyCH4IV	ACGT	4 cut(s)	217, 944, 2119, 2325
HpySE526I	ACGT	4 cut(s)	217, 944, 2119, 2325
HspAI	GCGC	5 cut(s)	499, 713, 1888, 2542, 2813
Ksp22I	TGATCA	1 cut(s)	1771
KspAI	GTTAAC	1 cut(s)	694
Kzo9I	GATC	9 cut(s)	265, 844, 985, 1771, 2104, 2518, 2524, 2565, 2569
LguI	GCTCTTC	2 cut(s)	417, 1739
LmnI	GCTCC	4 cut(s)	432, 1219, 1624, 2485
Lsp1109I	GCAGC	2 cut(s)	70, 1553
MaeI	CTAG	3 cut(s)	297, 2090, 2346
MaeII	ACGT	4 cut(s)	217, 944, 2119, 2325
MaeIII	GTNAC	2 cut(s)	292, 1584
MalI	GATC	9 cut(s)	267, 846, 987, 1773, 2106, 2520, 2526, 2567, 2571
MboI	GATC	9 cut(s)	265, 844, 985, 1771, 2104, 2518, 2524, 2565, 2569
MflI	RGATCY	1 cut(s)	265
MhlI	GDGCHC	2 cut(s)	429, 1468
MlsI	TGGCCA	3 cut(s)	702, 1356, 1427
MluNI	TGGCCA	3 cut(s)	702, 1356, 1427
MlyI	GAGTC	7 cut(s)	119, 314, 464, 480, 1796, 1888, 2351
MmeI	TCCRAC	1 cut(s)	1188
Mox20I	TGGCCA	3 cut(s)	702, 1356, 1427
Mph1103I	ATGCAT	2 cut(s)	964, 1114
MroXI	GAANNNNTTC	2 cut(s)	2186, 2723
MscI	TGGCCA	3 cut(s)	702, 1356, 1427
MslI	CAYNNNNRTG	2 cut(s)	1086, 2328
Msp20I	TGGCCA	3 cut(s)	702, 1356, 1427
MspA1I	CMGCKG	2 cut(s)	665, 1625
MspCI	CTTAAG	1 cut(s)	530
MspI	CCGG	2 cut(s)	994, 1638
MspR9I	CCNGG	4 cut(s)	597, 994, 2660, 2730
Mva1269I	GAATGC	2 cut(s)	874, 2077
MvaI	CCWGG	3 cut(s)	597, 2660, 2730
MvnI	CGCG	1 cut(s)	2838
NciI	CCSGG	1 cut(s)	994
NcoI	CCATGG	1 cut(s)	430
NdeII	GATC	9 cut(s)	265, 844, 985, 1771, 2104, 2518, 2524, 2565, 2569
NlaIV	GGNNCC	2 cut(s)	1416, 2596
NmeAIII	GCCGAG	1 cut(s)	61
NsbI	TGCGCA	2 cut(s)	500, 2814
NsiI	ATGCAT	2 cut(s)	964, 1114
NspI	RCATGY	5 cut(s)	104, 293, 719, 1019, 1851
PaeI	GCATGC	1 cut(s)	104
PagI	TCATGA	3 cut(s)	181, 1897, 2764
PceI	AGGCCT	1 cut(s)	2098
PciI	ACATGT	1 cut(s)	289
PciSI	GCTCTTC	2 cut(s)	417, 1739
PctI	GAATGC	2 cut(s)	874, 2077
PdmI	GAANNNNTTC	2 cut(s)	2186, 2723
PflMI	CCANNNNNTGG	2 cut(s)	1968, 2806
PfoI	TCCNGGA	2 cut(s)	595, 992
PkrI	GCNGC	3 cut(s)	60, 1543, 1929
PleI	GAGTC	7 cut(s)	119, 314, 463, 479, 1796, 1888, 2350
PpsI	GAGTC	7 cut(s)	119, 314, 463, 479, 1796, 1888, 2350
Ppu21I	YACGTR	1 cut(s)	2326
PpuMI	RGGWCCY	1 cut(s)	2305
PscI	ACATGT	1 cut(s)	289
PshBI	ATTAAT	1 cut(s)	2417
Psp124BI	GAGCTC	1 cut(s)	429
Psp1406I	AACGTT	1 cut(s)	217
Psp5II	RGGWCCY	1 cut(s)	2305
Psp6I	CCWGG	3 cut(s)	595, 2658, 2728
PspGI	CCWGG	3 cut(s)	595, 2658, 2728
PspN4I	GGNNCC	2 cut(s)	1416, 2596
PspPI	GGNCC	5 cut(s)	1386, 1415, 1640, 2110, 2305
PspPPI	RGGWCCY	1 cut(s)	2305
PstI	CTGCAG	1 cut(s)	691
PsuI	RGATCY	1 cut(s)	265
PvuII	CAGCTG	2 cut(s)	665, 1625
RsaI	GTAC	5 cut(s)	603, 2251, 2314, 2466, 2677
RsaNI	GTAC	5 cut(s)	602, 2250, 2313, 2465, 2676
RseI	CAYNNNNRTG	2 cut(s)	1086, 2328
SacI	GAGCTC	1 cut(s)	429
SapI	GCTCTTC	2 cut(s)	417, 1739
SatI	GCNGC	3 cut(s)	59, 1542, 1928
Sau3AI	GATC	9 cut(s)	265, 844, 985, 1771, 2104, 2518, 2524, 2565, 2569
Sau96I	GGNCC	5 cut(s)	1386, 1415, 1640, 2110, 2305
ScaI	AGTACT	3 cut(s)	603, 2251, 2314
SchI	GAGTC	7 cut(s)	119, 314, 464, 480, 1796, 1888, 2351
ScrFI	CCNGG	4 cut(s)	597, 994, 2660, 2730
SduI	GDGCHC	2 cut(s)	429, 1468
SfcI	CTRYAG	1 cut(s)	687
SinI	GGWCC	4 cut(s)	1386, 1640, 2110, 2305
SmiMI	CAYNNNNRTG	2 cut(s)	1086, 2328
SmlI	CTYRAG	2 cut(s)	530, 1229
SmoI	CTYRAG	2 cut(s)	530, 1229
SphI	GCATGC	1 cut(s)	104
SseBI	AGGCCT	1 cut(s)	2098
SsiI	CCGC	5 cut(s)	1526, 1928, 2422, 2711, 2838
SspI	AATATT	2 cut(s)	446, 2014
SspMI	CTAG	3 cut(s)	297, 2090, 2346
SstI	GAGCTC	1 cut(s)	429
StuI	AGGCCT	1 cut(s)	2098
StyD4I	CCNGG	4 cut(s)	595, 992, 2658, 2728
StyI	CCWWGG	1 cut(s)	430
TaaI	ACNGT	8 cut(s)	179, 698, 1060, 1395, 1490, 1593, 1759, 2563
TaiI	ACGT	4 cut(s)	220, 947, 2122, 2328
TaqI	TCGA	9 cut(s)	474, 484, 834, 984, 1199, 1468, 2489, 2517, 2568
TatI	WGTACW	4 cut(s)	601, 2249, 2312, 2464
TauI	GCSGC	1 cut(s)	1930
TseI	GCWGC	2 cut(s)	58, 1541
TspDTI	ATGAA	9 cut(s)	17, 939, 1178, 1376, 1529, 1758, 1845, 2732, 2753
TspGWI	ACGGA	4 cut(s)	5, 263, 777, 1271
Van91I	CCANNNNNTGG	2 cut(s)	1968, 2806
Vha464I	CTTAAG	1 cut(s)	530
VpaK11BI	GGWCC	4 cut(s)	1386, 1640, 2110, 2305
VspI	ATTAAT	1 cut(s)	2417
XapI	RAATTY	6 cut(s)	749, 808, 1142, 1608, 2512, 2760
XbaI	TCTAGA	2 cut(s)	2089, 2345
XceI	RCATGY	5 cut(s)	104, 293, 719, 1019, 1851
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1325
XmiI	GTMKAC	1 cut(s)	2457
XmnI	GAANNNNTTC	2 cut(s)	2186, 2723
XspI	CTAG	3 cut(s)	297, 2090, 2346
ZrmI	AGTACT	3 cut(s)	603, 2251, 2314
Zsp2I	ATGCAT	2 cut(s)	964, 1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.