RLG00000010338

Belongs to the peptidase C19 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
800240 .. 812556
12317 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010338

Sequence Viewer

Length: 4692 bp
ATGACTAAATACATTTGGCGGCAAGAGCCAAGCGGCGAGAGATCGAGCGGGGTCCCAAGCGTCGTGCCTTCCAAAGAGGGTTTTAGCGGTAGGTCCCAGGTCCCATTCCCACCGTGTATTCCGGCTCCGCGTTGGCGCCGAGCTCAAGCGCGTGAAACCAACCGCAAACTACTAAAAAGGAAGGCAAAAAAACAAGGAAAAGCAATGGCGGATGACAAAGGCCTTGAAGGCGACAAGAACGAAGCCCCCGCCGCCGCCGCTACGCCTCCGGCGGTGCCGAAGAAGAATCGCAAGGGATTTTTTTCCAGAATGTTTACCGGCATGTTTCGGCACCGGGACGATTTTGAGAAGCGGCTGCAGTATCTCTCTAAGGAGGAGGTTACTGTGGTCAATAGAATCAACAGGAGGGCTCTGACTCGGAGAAGCTTCACCAGAAACGTCATTGCATTCTCTATTTTCTTCGAGGTCATCGCAATTGGTTATGCTATAGCAACTACGAGAACGACTGACTTGGACTGGAGGACGAGGACATTTCGAATTTTGCCAATGTTTCTGTTGCCTGCTTTGTCTTCTTTTACTTATTCAACATTTATGAACTTCACAAAGATGCGTGATCGCAAAGATAATAAGACCCTGGAAAGGCTCCGGGCTGAAAAGCAAGCAAAAATTGATGAACTTAAAGAGAAGACAAACTATTACTCTACTCAACAGCTTATTCAGGATGTTGAACTTGTCCAGTCTGGTGAACTTCGAAACCGGAAAACAGGACTCACCAGATCTAATAGTACAGGGAGTACACCATTGCTTTTTTCTGAGGAAGAGACTCCTCGTTCTGTTGGGTCTGAGGGTCCCCAGACTGCTGAGCATGGTCAGCTGGTTGTTGCTCATCAGAATCCTCAAGCATATGCTGCACAAGATGGAAATTGGATTGCTCGTATTGCAGCATTACTTGTGGGTGAGGATCCAACACAATCTTATGCCCTCATATGTGGCAACTGTCATATGCACAATGGGCTTGCTAAGAAGGAGGATTTCGCATACATTACTTATTATTGCCCACACTGTCATGCTCTAAATAGGCCAAAGCATTTGGAAGGGGGTGTTACTGGTTCAGGCTCTCCTGATTCGGGATCTCTGACAGCAGGGGACAGGAGTGATGTAGCAAACCAGGCCAGTGATTCTTTGAATGACAGTGTCGTCACAGGTACCAGCTCAGTTGTAGCTGGTCCTGAGATTGAGCAAATAACTGAGAGGCGTGTGTCGGGTGATACAGATACAGTATGGGGGGCTTTGTTTTCTGCTGGACGGATTTATGGGCTTGCCTTATATGCTTGCTTTCTTCTTCATCATCTTCGTCTTCTTCTCCCAAACCACAACCAGGGTTGGTCGGTTGTTAAAATGAGCCGGCCAAGTACTCGGAGTAAGAACAAACGAAATAAGCAAGGGGATAATGGTGACACCACTTCTGAAATATTGAGGAAAATTCATGCAACGGGTGAAATAACGAATCAGGATATAAACACACTGTATAAAATTTCAAAGCCGCTTTGTCAGGGCTGCCGTGTGAATACTAAAGACAATCCGAATTGCTTTTGTGGGCTAATTCCACCTCCTAATGGCAGTCGGAAATCTGGCTTGTGGCAGAAGACATCTGAGATTCTGCAAAACCTTGGCCCGGACCCTTCTCAGGATCTTCGTTCTTCTGATGACTGCCCTGCAGGCCTCACAAATCTCGGTGCGACATGTTATGCTAACAGCATACTCCAGTGTTTGTATATGAACAAGCCCTTTCGTGAAGGTATCTTCTTGGTTGAACCTGATGTCTTGGAACAACAGCCGGTGTTGAATCAACTTTCTCGGCTTTTTGCACAGTTGCATCTCAGCAAAATGGCTTTCATAGACTCATCCCCATTTGTGAAAACTTTGGAGTTGGATAATGGAGTTCAACAGGACAGTCATGAATTTCTAACATTATTGCTGTCTTTGTTGGAACGTTGTCTAAGCCACTCTAAAATTTTGAAGGCGAAAGCTATTGTTCAAGATCTTTTCCGTGGAAGTGTGTCACATGTTACGAGGTGCTCAAAATGTGGAAAAGACTCTGAAGCTTCTTCAAACATGGAAGACTTTTATGAATTGGAGTTGAATGTGAAGGGTTTGAAAAGTTTGGATGAGAGTTTAGATGATTACCTCAGTGTTGAAGAGCTTCAGGGAGACAATCAATATTTCTGCGAGTCATGTAAAACAAGAGTTGATGCTACTCGAAGCATCAAGTTGCGCACATTGCCTACTGTTCTGAATTTTCAGCTTAAGCGATGTGTTTTCCTTCCAAAGACGACAACAAAGAAGAAGATTACATCTGCATTTATGTTTCCTGGAGTACTTGATATGAGGCAGAGGCTATCTGAGCCCTCACAGATTGAATCAATATATGACTTGTCAGCTGTGCTGATTCACAAGGGAACTGCAGTTAACAGTGGCCACTATGTAGCACATATCAAGGATGAGAAGACAGGGCAATGGTGGGAATTTGACGATGAGCATGTCTCAAACTTAGGGACTCACCCGTTTGGAGAAGGGACTTCTAGTTCCAATAGCAAGCCTCTTAAACCTGAAGCAGTTAACCCATCTTGCTCAGAACAGATGAATGGTGTTTCTAATGGTGATAAGATGGATATTGATCACCAACAACCTTCAGATTCTATTACTAGTTGTGATGTGGATACATTTTCATCAAGTGATGCATATATGCTGATGTATAATCTCAGGCATTCCTGGAAGGATAATGGGAAAACCCATGTTGAATGTAATGCCAATAATATGAAGATAGAAGATGATAGTGTTTCTGGTTCTCTTCCATTTAATCTTTGTGAAGAGATTAAAAGCAGTAATGCATTATATCTTGAATCTTGCCAAAAATACACATTTAAGAAGGAAGAAGAGATGAGTCGTATCAAAGAACGAAGACAGGAAGTGCGCTCAATTTTGTCTGAAGCTCCTGTTCGATCACTTGAGGAACCTTTTTTTTGGGTTTCAACAGATTGGCTTCGTCAGTGGGCTGACAACATTACTCCACCTGTTCTTGACAACAGCTCCATCCAATGCATGCATGGAAAGGTTCCAGCATCTAAGGTTGGCTCCATGAAGCGGTTCTCTGCTGAAGCTTGGACCAAGTTGTTCTCTAAGCACAATGGGGGGCCAATTCTGACCAATGATGACTCCTGCACGATTTGCCTTATTGATGGGGCTCGAGATGTGGTCTCTGCTGACAGCTATAGGGATAGGAGAATATTAATGAAGCAAGTTGCTGAGGATGCCATTGCAGGGAGGTGTTCAGATGGAACATACTATGTTTCTAGATCATGGTTGCAGCAGTGGCTTAAAAGAAAAATTCTTGATGCTCCATCTGAAGCTGATGCAGGACCAACAGTTTCAATCAGGTGTCCTCATGGACAGCTTTTGCCTGAGCAAGCCCCTGGTGCTAAGAGATTGCTTATTCCGGAGATCCTCTGGCTCTTCCTTTATCAAGATGCTTTAACAGTAAAACCTGCTGAGGACCTGGGTTGTTCAACTTTTCTCTCAGACTCTCTACAGTGTTCTGAGTGCAGTGATGAACTATCTGAAGTTGCATGCATGGAGGATTCTTTAAGATTGGTCAGGGAAAAACAGCGCCAGACTCATGATAAATTGGCTGCTGGGAAAAGTGTTCCTCTTTCTCTGCATTGCAAGTATTACTTGATACCCTATTCTTGGCTTTCAAAATGGAGAACCTACATCAACGCAGCCGGAAGGAATATTTCTTCAGTAGAGAAACCGGAAACATTAGATGGCATCATGGATTTGATCAAGTGTGAAAAGCACTCACGACTTCTAGAAAGGCCTGTTGATCTGGTCTGTAAACGTGGTCTGATTTCACAAAAGTCTTCCCCTGTGGATGGGTTAATATTCATTACTGAGAGTGACTGGAAATCCTTCTGTGAGGAATGGGGTGGTATTGAGGAAAAAGGTGTATCTGCTGAAATCAAGTTAAGTAATACTGAAGGAAATAACTTGGCAGAGTCCTCTGATGATATGCAAATCTGTGAGGAGGACTTGACTACTCCAAATCTCGTGAATAGTGAAGTTGATTCTAGATCGCTTGTGATTAGGACTTTCCCTGAGATATGTGAGGACTGCATTGGAGAGAAAGAAAGCAGGGAGCTAATGCGAAAGCTTGAGTACTGCAATGAGGATATATATGTATACTTGGTACATGGCAAGGAAGCTCCAAAATATATTTTACAAGCATCTGAGACTAGTTTTGATCCAGATCGCCGAGTTTCCAAGCGCTCTCGAAAGACAAACACCGGAGATCAAATAAGTTTGAAAGTCTCTGGTTCTACATCGATATACCAGTTAAAAATGATGATATGGGAATCTTTTGGGGTTGTTAAGGAAAACCAGATACTTCACAAAGGCACCCGAATAATTGATAGTGAATGTGCTACTCTGGCAGACTTGAACATATTCCCTGGGGATAAGCTTTGGGTGACTGATTCAGAAGTCCATGAGAACCGAGATATTGCTGATGAGCTTTCTGACCAAAAAATGGATGTTCAACACACTGAAGAGGGTTTTCGGGGGACACTTTTGACGACGAATATCTCATCCCAAACGGCATGTTGGAAGACCTGCATTTTTAGAAGCAGTTCTTGA

Protein Analysis

1564

Amino Acids

175.6

Weight (kDa)

6.54

Isoelectric Point (pI)

55.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_10 PF10058 309 - 359 2e-19 ER junction formation factor lunapark, zinc ribbon finger
UCH PF00443 573 - 919 3.5e-51 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 573 - 848 1.1e-16 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1196
Acc16I TGCGCA 1 cut(s) 2276
Acc36I ACCTGC 2 cut(s) 3553, 4676
Acc65I GGTACC 1 cut(s) 1205
AccB1I GGYRCC 5 cut(s) 135, 274, 330, 1205, 4454
AccB7I CCANNNNNTGG 1 cut(s) 4585
AccBSI CCGCTC 1 cut(s) 48
AccI GTMKAC 1 cut(s) 4239
AccII CGCG 2 cut(s) 130, 151
AccIII TCCGGA 1 cut(s) 3496
AclI AACGTT 1 cut(s) 1993
AclWI GGATC 6 cut(s) 956, 969, 1138, 1698, 3496, 4295
AcoI YGGCCR 2 cut(s) 1406, 2476
AcsI RAATTY 8 cut(s) 537, 1482, 1533, 1961, 2013, 2296, 2525, 3387
AcyI GRCGYC 1 cut(s) 136
AfaI GTAC 7 cut(s) 787, 796, 1207, 1414, 2379, 4217, 4248
AfeI AGCGCT 1 cut(s) 4325
AflII CTTAAG 1 cut(s) 2306
AflIII ACRYGT 2 cut(s) 1742, 2065
AhlI ACTAGT 2 cut(s) 2705, 4292
AjnI CCWGG 9 cut(s) 96, 633, 1167, 1377, 2371, 2771, 3472, 3555, 4507
AloI GAACNNNNNNTCC 2 cut(s) 2569, 2601
Alw21I GWGCWC 2 cut(s) 145, 2081
Alw26I GTCTC 6 cut(s) 815, 2205, 2548, 3262, 4283, 4372
AlwI GGATC 6 cut(s) 956, 969, 1138, 1698, 3496, 4295
Ama87I CYCGRG 1 cut(s) 3246
Aor13HI TCCGGA 1 cut(s) 3496
Aor51HI AGCGCT 1 cut(s) 4325
AoxI GGCC 9 cut(s) 220, 1079, 1170, 1406, 1672, 1720, 2476, 3194, 3875
ApeKI GCWGC 7 cut(s) 355, 908, 941, 1557, 3367, 3689, 3779
ApoI RAATTY 8 cut(s) 537, 1482, 1533, 1961, 2013, 2296, 2525, 3387
AseI ATTAAT 1 cut(s) 3290
Asp700I GAANNNNTTC 5 cut(s) 2202, 3146, 3968, 4502, 4684
Asp718I GGTACC 1 cut(s) 1205
AspLEI GCGC 6 cut(s) 138, 151, 2277, 2976, 3669, 4326
AsuC2I CCSGG 3 cut(s) 335, 647, 1676
AsuII TTCGAA 2 cut(s) 535, 751
AvaI CYCGRG 1 cut(s) 3246
AvaII GGWCC 9 cut(s) 52, 93, 100, 848, 1226, 1678, 3165, 3419, 3553
BalI TGGCCA 1 cut(s) 2478
BamHI GGATCC 1 cut(s) 961
BanI GGYRCC 5 cut(s) 135, 274, 330, 1205, 4454
BanII GRGCYC 4 cut(s) 145, 412, 2409, 3247
BauI CACGAG 1 cut(s) 4106
BbsI GAAGAC 9 cut(s) 561, 692, 1349, 1652, 2127, 2513, 2968, 3912, 4670
Bbv12I GWGCWC 2 cut(s) 145, 2081
BbvCI CCTCAGC 2 cut(s) 3306, 3549
BbvI GCAGC 7 cut(s) 342, 895, 953, 1544, 3379, 3676, 3791
BccI CCATC 9 cut(s) 911, 2632, 2662, 3101, 3233, 3329, 3409, 3818, 3926
BceAI ACGGC 2 cut(s) 1545, 4668
BciT130I CCWGG 9 cut(s) 98, 635, 1169, 1379, 2373, 2773, 3474, 3557, 4509
BciVI GTATCC 1 cut(s) 2713
BclI TGATCA 2 cut(s) 2677, 3840
BcnI CCSGG 3 cut(s) 335, 647, 1676
BcoDI GTCTC 6 cut(s) 815, 2205, 2548, 3262, 4283, 4372
BcuI ACTAGT 2 cut(s) 2705, 4292
BfaI CTAG 6 cut(s) 2583, 2706, 3354, 3869, 4128, 4293
BfmI CTRYAG 6 cut(s) 356, 486, 1716, 2463, 3271, 3587
BfoI RGCGCY 3 cut(s) 139, 3670, 4327
BfrI CTTAAG 1 cut(s) 2306
BfuAI ACCTGC 2 cut(s) 3553, 4676
BfuI GTATCC 1 cut(s) 2713
BglI GCCNNNNNGGC 2 cut(s) 228, 1719
BglII AGATCT 2 cut(s) 776, 2041
BlpI GCTNAGC 1 cut(s) 861
BmcAI AGTACT 3 cut(s) 1414, 2379, 4217
Bme18I GGWCC 9 cut(s) 52, 93, 100, 848, 1226, 1678, 3165, 3419, 3553
BmeT110I CYCGRG 1 cut(s) 3246
BpiI GAAGAC 9 cut(s) 561, 692, 1349, 1652, 2127, 2513, 2968, 3912, 4670
BplI GAGNNNNNCTC 2 cut(s) 2528, 2560
BpmI CTGGAG 3 cut(s) 538, 1748, 2394
Bpu10I CCTNAGC 3 cut(s) 3306, 3462, 3549
Bpu1102I GCTNAGC 1 cut(s) 861
Bpu14I TTCGAA 2 cut(s) 535, 751
BpuEI CTTGAG 4 cut(s) 129, 882, 3029, 4232
BpuMI CCSGG 3 cut(s) 335, 647, 1676
Bsa29I ATCGAT 1 cut(s) 4382
BsaBI GATNNNNATC 2 cut(s) 2676, 4305
BsaHI GRCGYC 1 cut(s) 136
BsaI GGTCTC 1 cut(s) 3262
BsaJI CCNNGG 9 cut(s) 96, 633, 1378, 1669, 2050, 3472, 3556, 4507, 4508
BsaWI WCCGGW 4 cut(s) 756, 3496, 3811, 4343
BsaXI ACNNNNNCTCC 2 cut(s) 3074, 3104
Bse118I RCCGGY 3 cut(s) 317, 1404, 1837
Bse1I ACTGG 7 cut(s) 521, 736, 1111, 1173, 1765, 3965, 4390
Bse3DI GCAATG 8 cut(s) 210, 441, 800, 2279, 2522, 3315, 3718, 4228
Bse8I GATNNNNATC 2 cut(s) 2676, 4305
BseAI TCCGGA 1 cut(s) 3496
BseBI CCWGG 9 cut(s) 98, 635, 1169, 1379, 2373, 2773, 3474, 3557, 4509
BseCI ATCGAT 1 cut(s) 4382
BseDI CCNNGG 9 cut(s) 96, 633, 1378, 1669, 2050, 3472, 3556, 4507, 4508
BseJI GATNNNNATC 2 cut(s) 2676, 4305
BseMI GCAATG 8 cut(s) 210, 441, 800, 2279, 2522, 3315, 3718, 4228
BseNI ACTGG 7 cut(s) 521, 736, 1111, 1173, 1765, 3965, 4390
BseRI GAGGAG 3 cut(s) 389, 816, 4097
BseXI GCAGC 7 cut(s) 342, 895, 953, 1544, 3379, 3676, 3791
BseYI CCCAGC 1 cut(s) 3692
BsgI GTGCAG 3 cut(s) 894, 3205, 3622
Bsh1236I CGCG 2 cut(s) 130, 151
BshFI GGCC 9 cut(s) 222, 1081, 1172, 1408, 1674, 1722, 2478, 3196, 3877
BshNI GGYRCC 5 cut(s) 135, 274, 330, 1205, 4454
BshVI ATCGAT 1 cut(s) 4382
BsiHKAI GWGCWC 2 cut(s) 145, 2081
BsiHKCI CYCGRG 1 cut(s) 3246
BslFI GGGAC 9 cut(s) 38, 79, 86, 350, 834, 1160, 2569, 2590, 4633
BsmAI GTCTC 6 cut(s) 815, 2205, 2548, 3262, 4283, 4372
BsmFI GGGAC 9 cut(s) 38, 79, 86, 350, 834, 1160, 2569, 2590, 4633
BsmI GAATGC 2 cut(s) 446, 2767
BsnI GGCC 9 cut(s) 222, 1081, 1172, 1408, 1674, 1722, 2478, 3196, 3877
Bso31I GGTCTC 1 cut(s) 3262
BsoBI CYCGRG 1 cut(s) 3246
Bsp119I TTCGAA 2 cut(s) 535, 751
Bsp1286I GDGCHC 5 cut(s) 145, 412, 2081, 2409, 3247
Bsp13I TCCGGA 1 cut(s) 3496
Bsp1720I GCTNAGC 1 cut(s) 861
BspANI GGCC 9 cut(s) 222, 1081, 1172, 1408, 1674, 1722, 2478, 3196, 3877
BspDI ATCGAT 1 cut(s) 4382
BspEI TCCGGA 1 cut(s) 3496
BspFNI CGCG 2 cut(s) 130, 151
BspHI TCATGA 2 cut(s) 1957, 3676
BspMAI CTGCAG 3 cut(s) 360, 1720, 2467
BspMI ACCTGC 2 cut(s) 3553, 4676
BspPI GGATC 6 cut(s) 956, 969, 1138, 1698, 3496, 4295
BspQI GCTCTTC 2 cut(s) 2193, 3518
BspT104I TTCGAA 2 cut(s) 535, 751
BspT107I GGYRCC 5 cut(s) 135, 274, 330, 1205, 4454
BspTI CTTAAG 1 cut(s) 2306
BspTNI GGTCTC 1 cut(s) 3262
BsrBI CCGCTC 1 cut(s) 48
BsrDI GCAATG 8 cut(s) 210, 441, 800, 2279, 2522, 3315, 3718, 4228
BsrFI RCCGGY 3 cut(s) 317, 1404, 1837
BsrI ACTGG 7 cut(s) 521, 736, 1111, 1173, 1765, 3965, 4390
BssAI RCCGGY 3 cut(s) 317, 1404, 1837
BssECI CCNNGG 9 cut(s) 96, 633, 1378, 1669, 2050, 3472, 3556, 4507, 4508
BssNAI GTATAC 1 cut(s) 4240
BssNI GRCGYC 1 cut(s) 136
BssSI CACGAG 1 cut(s) 4106
BssT1I CCWWGG 1 cut(s) 1669
Bst1107I GTATAC 1 cut(s) 4240
Bst2BI CACGAG 1 cut(s) 4106
Bst2UI CCWGG 9 cut(s) 98, 635, 1169, 1379, 2373, 2773, 3474, 3557, 4509
Bst6I CTCTTC 7 cut(s) 813, 2193, 2856, 2865, 2931, 3518, 4599
BstACI GRCGYC 1 cut(s) 136
BstAFI CTTAAG 1 cut(s) 2306
BstAPI GCANNNNNTGC 2 cut(s) 908, 3228
BstBI TTCGAA 2 cut(s) 535, 751
BstDSI CCRYGG 1 cut(s) 2050
BstFNI CGCG 2 cut(s) 130, 151
BstH2I RGCGCY 3 cut(s) 139, 3670, 4327
BstHHI GCGC 6 cut(s) 138, 151, 2277, 2976, 3669, 4326
BstMAI GTCTC 6 cut(s) 815, 2205, 2548, 3262, 4283, 4372
BstNI CCWGG 9 cut(s) 98, 635, 1169, 1379, 2373, 2773, 3474, 3557, 4509
BstNSI RCATGY 7 cut(s) 325, 1746, 2069, 2543, 3106, 3630, 4659
BstSFI CTRYAG 6 cut(s) 356, 486, 1716, 2463, 3271, 3587
BstUI CGCG 2 cut(s) 130, 151
BstV1I GCAGC 7 cut(s) 342, 895, 953, 1544, 3379, 3676, 3791
BstV2I GAAGAC 9 cut(s) 561, 692, 1349, 1652, 2127, 2513, 2968, 3912, 4670
BstX2I RGATCY 6 cut(s) 776, 961, 1130, 1690, 2041, 3501
BstYI RGATCY 6 cut(s) 776, 961, 1130, 1690, 2041, 3501
BstZ17I GTATAC 1 cut(s) 4240
Bsu15I ATCGAT 1 cut(s) 4382
BsuI GTATCC 1 cut(s) 2713
BsuRI GGCC 9 cut(s) 222, 1081, 1172, 1408, 1674, 1722, 2478, 3196, 3877
BsuTUI ATCGAT 1 cut(s) 4382
BtgI CCRYGG 1 cut(s) 2050
BtgZI GCGATG 2 cut(s) 454, 2326
BtsI GCAGTG 2 cut(s) 3377, 3610
BveI ACCTGC 2 cut(s) 3553, 4676
CciI TCATGA 2 cut(s) 1957, 3676
CfoI GCGC 6 cut(s) 138, 151, 2277, 2976, 3669, 4326
Cfr10I RCCGGY 3 cut(s) 317, 1404, 1837
ClaI ATCGAT 1 cut(s) 4382
CseI GACGC 1 cut(s) 49
Csp6I GTAC 7 cut(s) 786, 795, 1206, 1413, 2378, 4216, 4247
CviQI GTAC 7 cut(s) 786, 795, 1206, 1413, 2378, 4216, 4247
DinI GGCGCC 1 cut(s) 137
DrdI GACNNNNNNGTC 1 cut(s) 1196
DseDI GACNNNNNNGTC 1 cut(s) 1196
EaeI YGGCCR 2 cut(s) 1406, 2476
Eam1104I CTCTTC 7 cut(s) 813, 2193, 2856, 2865, 2931, 3518, 4599
EarI CTCTTC 7 cut(s) 813, 2193, 2856, 2865, 2931, 3518, 4599
EciI GGCGGA 1 cut(s) 224
Ecl136II GAGCTC 1 cut(s) 143
Eco130I CCWWGG 1 cut(s) 1669
Eco147I AGGCCT 3 cut(s) 222, 1722, 3877
Eco24I GRGCYC 4 cut(s) 145, 412, 2409, 3247
Eco31I GGTCTC 1 cut(s) 3262
Eco47I GGWCC 9 cut(s) 52, 93, 100, 848, 1226, 1678, 3165, 3419, 3553
Eco47III AGCGCT 1 cut(s) 4325
Eco53kI GAGCTC 1 cut(s) 143
Eco88I CYCGRG 1 cut(s) 3246
EcoICRI GAGCTC 1 cut(s) 143
EcoO109I RGGNCCY 5 cut(s) 52, 93, 100, 848, 3553
EcoRII CCWGG 9 cut(s) 96, 633, 1167, 1377, 2371, 2771, 3472, 3555, 4507
EcoT14I CCWWGG 1 cut(s) 1669
EcoT22I ATGCAT 5 cut(s) 2743, 2893, 3104, 3108, 3632
EcoT38I GRGCYC 4 cut(s) 145, 412, 2409, 3247
EgeI GGCGCC 1 cut(s) 137
EheI GGCGCC 1 cut(s) 137
ErhI CCWWGG 1 cut(s) 1669
FalI AAGNNNNNCTT 3 cut(s) 3716, 3748, 4672
FaqI GGGAC 9 cut(s) 38, 79, 86, 350, 834, 1160, 2569, 2590, 4633
FauI CCCGC 2 cut(s) 41, 256
FauNDI CATATG 3 cut(s) 904, 986, 1002
FbaI TGATCA 2 cut(s) 2677, 3840
FblI GTMKAC 1 cut(s) 4239
FriOI GRGCYC 4 cut(s) 145, 412, 2409, 3247
FspBI CTAG 6 cut(s) 2583, 2706, 3354, 3869, 4128, 4293
FspI TGCGCA 1 cut(s) 2276
GlaI GCGC 6 cut(s) 137, 150, 2276, 2975, 3668, 4325
GsaI CCCAGC 1 cut(s) 3696
GsuI CTGGAG 3 cut(s) 538, 1748, 2394
HaeII RGCGCY 3 cut(s) 139, 3670, 4327
HaeIII GGCC 9 cut(s) 222, 1081, 1172, 1408, 1674, 1722, 2478, 3196, 3877
HgaI GACGC 1 cut(s) 49
HhaI GCGC 6 cut(s) 138, 151, 2277, 2976, 3669, 4326
Hin1I GRCGYC 1 cut(s) 136
Hin6I GCGC 6 cut(s) 136, 149, 2275, 2974, 3667, 4324
HinP1I GCGC 6 cut(s) 136, 149, 2275, 2974, 3667, 4324
HincII GTYRAC 2 cut(s) 2470, 2620
HindII GTYRAC 2 cut(s) 2470, 2620
HindIII AAGCTT 5 cut(s) 424, 2103, 3159, 4208, 4517
HpaI GTTAAC 2 cut(s) 2470, 2620
Hpy166II GTNNAC 7 cut(s) 315, 746, 797, 2470, 2620, 3896, 4240
Hpy8I GTNNAC 7 cut(s) 315, 746, 797, 2470, 2620, 3896, 4240
Hpy99I CGWCG 2 cut(s) 65, 4636
HpyCH4IV ACGT 3 cut(s) 438, 1993, 3898
HpySE526I ACGT 3 cut(s) 438, 1993, 3898
Hsp92I GRCGYC 1 cut(s) 136
HspAI GCGC 6 cut(s) 136, 149, 2275, 2974, 3667, 4324
KasI GGCGCC 1 cut(s) 135
KflI GGGWCCC 2 cut(s) 52, 848
Kpn2I TCCGGA 1 cut(s) 3496
KpnI GGTACC 1 cut(s) 1209
KroI GCCGGC 1 cut(s) 1404
KroNI GCCGGC 1 cut(s) 1406
Ksp22I TGATCA 2 cut(s) 2677, 3840
KspAI GTTAAC 2 cut(s) 2470, 2620
LguI GCTCTTC 2 cut(s) 2193, 3518
LmnI GCTCC 8 cut(s) 130, 648, 2998, 3095, 3140, 3403, 4195, 4267
Lsp1109I GCAGC 7 cut(s) 342, 895, 953, 1544, 3379, 3676, 3791
MaeI CTAG 6 cut(s) 2583, 2706, 3354, 3869, 4128, 4293
MaeII ACGT 3 cut(s) 438, 1993, 3898
MaeIII GTNAC 8 cut(s) 379, 1102, 1198, 1454, 2061, 2068, 3956, 4525
MbiI CCGCTC 1 cut(s) 48
MfeI CAATTG 1 cut(s) 474
MflI RGATCY 6 cut(s) 776, 961, 1130, 1690, 2041, 3501
MhlI GDGCHC 5 cut(s) 145, 412, 2081, 2409, 3247
MlsI TGGCCA 1 cut(s) 2478
MluNI TGGCCA 1 cut(s) 2478
Mly113I GGCGCC 1 cut(s) 136
MmeI TCCRAC 5 cut(s) 989, 1604, 1911, 1968, 4640
Mox20I TGGCCA 1 cut(s) 2478
Mph1103I ATGCAT 5 cut(s) 2743, 2893, 3104, 3108, 3632
MroI TCCGGA 1 cut(s) 3496
MroNI GCCGGC 1 cut(s) 1404
MroXI GAANNNNTTC 5 cut(s) 2202, 3146, 3968, 4502, 4684
MscI TGGCCA 1 cut(s) 2478
MslI CAYNNNNRTG 2 cut(s) 605, 1065
Msp20I TGGCCA 1 cut(s) 2478
MspA1I CMGCKG 2 cut(s) 874, 2441
MspCI CTTAAG 1 cut(s) 2306
MunI CAATTG 1 cut(s) 474
Mva1269I GAATGC 2 cut(s) 446, 2767
MvaI CCWGG 9 cut(s) 98, 635, 1169, 1379, 2373, 2773, 3474, 3557, 4509
MvnI CGCG 2 cut(s) 130, 151
NaeI GCCGGC 1 cut(s) 1406
NarI GGCGCC 1 cut(s) 136
NciI CCSGG 3 cut(s) 335, 647, 1676
NdeI CATATG 3 cut(s) 904, 986, 1002
NgoMIV GCCGGC 1 cut(s) 1404
NmeAIII GCCGAG 3 cut(s) 164, 1837, 4337
NmuCI GTSAC 5 cut(s) 1198, 1454, 2061, 3956, 4525
NsbI TGCGCA 1 cut(s) 2276
NsiI ATGCAT 5 cut(s) 2743, 2893, 3104, 3108, 3632
NspI RCATGY 7 cut(s) 325, 1746, 2069, 2543, 3106, 3630, 4659
NspV TTCGAA 2 cut(s) 535, 751
PaeI GCATGC 2 cut(s) 3106, 3630
PaeR7I CTCGAG 1 cut(s) 3246
PagI TCATGA 2 cut(s) 1957, 3676
PasI CCCWGGG 1 cut(s) 4508
PceI AGGCCT 3 cut(s) 222, 1722, 3877
PciI ACATGT 2 cut(s) 1742, 2065
PciSI GCTCTTC 2 cut(s) 2193, 3518
PctI GAATGC 2 cut(s) 446, 2767
PdiI GCCGGC 1 cut(s) 1406
PdmI GAANNNNTTC 5 cut(s) 2202, 3146, 3968, 4502, 4684
PflFI GACNNNGTC 1 cut(s) 1193
PflMI CCANNNNNTGG 1 cut(s) 4585
PfoI TCCNGGA 2 cut(s) 2371, 2771
PluTI GGCGCC 1 cut(s) 139
PpuMI RGGWCCY 5 cut(s) 52, 93, 100, 848, 3553
PscI ACATGT 2 cut(s) 1742, 2065
PshBI ATTAAT 1 cut(s) 3290
Psp124BI GAGCTC 1 cut(s) 145
Psp1406I AACGTT 1 cut(s) 1993
Psp5II RGGWCCY 5 cut(s) 52, 93, 100, 848, 3553
Psp6I CCWGG 9 cut(s) 96, 633, 1167, 1377, 2371, 2771, 3472, 3555, 4507
PspFI CCCAGC 1 cut(s) 3692
PspGI CCWGG 9 cut(s) 96, 633, 1167, 1377, 2371, 2771, 3472, 3555, 4507
PspPPI RGGWCCY 5 cut(s) 52, 93, 100, 848, 3553
PstI CTGCAG 3 cut(s) 360, 1720, 2467
PsuI RGATCY 6 cut(s) 776, 961, 1130, 1690, 2041, 3501
PsyI GACNNNGTC 1 cut(s) 1193
PvuII CAGCTG 2 cut(s) 874, 2441
RsaI GTAC 7 cut(s) 787, 796, 1207, 1414, 2379, 4217, 4248
RsaNI GTAC 7 cut(s) 786, 795, 1206, 1413, 2378, 4216, 4247
RseI CAYNNNNRTG 2 cut(s) 605, 1065
SacI GAGCTC 1 cut(s) 145
SapI GCTCTTC 2 cut(s) 2193, 3518
SbfI CCTGCAGG 1 cut(s) 1720
ScaI AGTACT 3 cut(s) 1414, 2379, 4217
SdaI CCTGCAGG 1 cut(s) 1720
SduI GDGCHC 5 cut(s) 145, 412, 2081, 2409, 3247
SfcI CTRYAG 6 cut(s) 356, 486, 1716, 2463, 3271, 3587
SfoI GGCGCC 1 cut(s) 137
Sfr274I CTCGAG 1 cut(s) 3246
SfuI TTCGAA 2 cut(s) 535, 751
SinI GGWCC 9 cut(s) 52, 93, 100, 848, 1226, 1678, 3165, 3419, 3553
SlaI CTCGAG 1 cut(s) 3246
SmiMI CAYNNNNRTG 2 cut(s) 605, 1065
SmlI CTYRAG 6 cut(s) 144, 897, 2306, 3008, 3246, 4211
SmoI CTYRAG 6 cut(s) 144, 897, 2306, 3008, 3246, 4211
SpeI ACTAGT 2 cut(s) 2705, 4292
SphI GCATGC 2 cut(s) 3106, 3630
Sse8387I CCTGCAGG 1 cut(s) 1720
SseBI AGGCCT 3 cut(s) 222, 1722, 3877
SspDI GGCGCC 1 cut(s) 135
SspI AATATT 5 cut(s) 1473, 2222, 3288, 3793, 3942
SspMI CTAG 6 cut(s) 2583, 2706, 3354, 3869, 4128, 4293
SstI GAGCTC 1 cut(s) 145
StuI AGGCCT 3 cut(s) 222, 1722, 3877
StyI CCWWGG 1 cut(s) 1669
TaiI ACGT 3 cut(s) 441, 1996, 3901
TaqI TCGA 9 cut(s) 44, 462, 535, 751, 2260, 3001, 3247, 4330, 4382
TatI WGTACW 5 cut(s) 785, 794, 1412, 2377, 4215
TauI GCSGC 7 cut(s) 22, 36, 254, 257, 260, 355, 1546
TseFI GTSAC 5 cut(s) 1198, 1454, 2061, 3956, 4525
TseI GCWGC 7 cut(s) 355, 908, 941, 1557, 3367, 3689, 3779
Tsp45I GTSAC 5 cut(s) 1198, 1454, 2061, 3956, 4525
TspGWI ACGGA 2 cut(s) 1321, 2039
Tth111I GACNNNGTC 1 cut(s) 1193
Van91I CCANNNNNTGG 1 cut(s) 4585
Vha464I CTTAAG 1 cut(s) 2306
VpaK11BI GGWCC 9 cut(s) 52, 93, 100, 848, 1226, 1678, 3165, 3419, 3553
VspI ATTAAT 1 cut(s) 3290
XapI RAATTY 8 cut(s) 537, 1482, 1533, 1961, 2013, 2296, 2525, 3387
XbaI TCTAGA 3 cut(s) 3353, 3868, 4127
XceI RCATGY 7 cut(s) 325, 1746, 2069, 2543, 3106, 3630, 4659
XcmI CCANNNNNNNNNTGG 1 cut(s) 3104
XhoI CTCGAG 1 cut(s) 3246
XmiI GTMKAC 1 cut(s) 4239
XmnI GAANNNNTTC 5 cut(s) 2202, 3146, 3968, 4502, 4684
XspI CTAG 6 cut(s) 2583, 2706, 3354, 3869, 4128, 4293
ZrmI AGTACT 3 cut(s) 1414, 2379, 4217
Zsp2I ATGCAT 5 cut(s) 2743, 2893, 3104, 3108, 3632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.