Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0010524

Physical Location & Seq

Genomic Coordinates Forward (+)

37734975 .. 37740740

Gene Structure 5766 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG200500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGCTTCGCCACATCTATCGATCTTCTTCCTTCTCTTCATCATCCCACAGAAAACCCAAACCCAAACCAAAACCGCTCCCCATGGGCTGCGTCCAAGCCAAACCCGAGATGAACGGTTCCACCAGACCTGTGGGGCTCGAAAGGCTCAAGCTGGATAATGGTTATGTGGGGAATGCTCAGAGAAGACCACCGCCGAGTGTGGATGATGGCAGTGGTAACGGCACTGGGGGAGAGGATCATAGTGAGGTGGCCGAGAGAGATAATAATAATAATAATAAGCATCCTCCTAGTTCTCGTAGAATTTCTGCTGCTGATGACGACGAGTTGGTCGATGGCTGGCCTAAATGGCTCACTGATAATATTTCCAAAGACGTTTTGGCTGGCTTGGTTCCCAAGAGTGCCGACTCCTATGATAAACTCGACAAGGTGGGCGAAGGAACCTACAGCAATGTTTACAAGGCTCGAGACAGGGACACTGGAAAAATTGTTGCCTTGAAGAAGGTCCGTTTTGATACATCAGAACCTGAGAGTGTTAAATTTATGGCAAGAGAGATTATGGTATTAAGGAAATTGGATCATCCCAATGTGCTTAAGCTTGAAGGATTGGCCACTTCAAGAATGCAATATAGCATTTATCTTGTCTTTGATTTCATGCACTCAGATTTGACAAAAGTTATTTCCAAAGCCGCAGGGCTTACTGAACCACAGGTCAAGTGCTATATGCATCAACTGCTTTCAGGTCTGCAGCACTGCCATGATCGTGGAATTTTGCATCGAGACATTAAAGGGTCGAACTTGTTGATAGATAAAAATGGGGTTCTAAAAATTGGCGATTTTGGGCTTGCGAATTATTATGCCCCAAAGCCCAAGCATCCTCTTACCAACCGAGTTGTGACACTTTGGTACAGAGCTCCCGAGCTGCTGTTGGGTTCTACAGATTATGGAGTTGGAATTGATCTTTGGAGCGCTGGATGCGTCTTGGCTGAAATGTTTACAGGGAGGCCACTTGTGCCTGGCAGAACAGAGGTTGAACAACTTCATAGGATTTTTAAGCTTTGTGGCACACCATCTGAGGAATACTGGAAAAAATTGAAGCTTTCTACAACTTTTCGAGCTCCGCGTTCATACAAACCCAGTCTTCAGGAATCTCTTAAGGATTTACCTTCATCTTCCTTGGGTCTGTTGGGCACTCTTCTTGCTTTAGATCCTGCCTATCGAGGCAGTGCAGCTCTAGGTCTCAAAAATGAATTCTTTTTTACAAGCCCCTTGGCATGTGACCTTTCTGGTCTACCTGTAATCTACAATGAGGAGGAAGAATTGAAACTAGCTAATGAGCAGAGAAAGTTCAGGAACTCTAGAGTAAAACAACGGTCTAGAAAACAACGTGAAAACCGCAGACAAGATGTTGCATCTTCCAAACAGGAGCTGGAGAAAACTGCTGAGCCAAATGTTGAAAATGAAGAGCCCGGTAGTGCTTCTAGTAGTACATCCTCTAGTGTAAACCAAACTAGCCGGAAAGAAAGCCCAATCTTCTCGCTTTCCCCAGTTAAATCTTCCAACCAGAAAGTGTCCCCTAAGAATGTCAAGAACCTACCTCCATTACCCAACTCTAAAGCACGCATCGCCAATTATAAGGACGACAGTGACATGTACAGGTCGAATTTGATTAACCGGTCTCTATCCACCAGAGAATTTAGAAAACCAACTCAAAGGGAGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

573

Amino Acids

64.14

Weight (kDa)

9.48

Isoelectric Point (pI)

45.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	137 - 418	1.2e-64	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	141 - 349	1.2e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010524)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13090 FvH4_2g13090 FvH4_2g13090 FvH4_2g13090 FvH4_2g13090 FvH4_2g13090
malus_domestica	MD05G1032700.v1.1 MD10G1033600.v1.1
prunus_persica	Prupe.8G039300_v2.0.a1 Prupe.8G039300_v2.0.a1 Prupe.8G039300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0274351
rosa_laevigata	RLG00000013550
rosa_multiflora	Rmu_ssc0000361.1_g000017
rosa_roxburghii	Rroxscaffold_7G00194310
rosa_rugosa	Rorug06G0081100
rosa_samantha	Rh6AG196300 Rh6BG200500 Rh6CG201400 Rh6DG192200
rosa_wichuraiana	Rw6G017150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1632
AasI	GACNNNNNNGTC	1 cut(s)	326
AccBSI	CCGCTC	1 cut(s)	76
AccI	GTMKAC	1 cut(s)	1288
AccII	CGCG	1 cut(s)	1120
AciI	CCGC	5 cut(s)	74, 191, 687, 1118, 1393
AclWI	GGATC	3 cut(s)	243, 582, 1199
AcoI	YGGCCR	2 cut(s)	249, 606
AcsI	RAATTY	6 cut(s)	300, 536, 765, 1247, 1660, 1691
AcuI	CTGAAG	1 cut(s)	1124
AfaI	GTAC	3 cut(s)	905, 1486, 1652
AfeI	AGCGCT	1 cut(s)	967
AflII	CTTAAG	2 cut(s)	590, 1151
AflIII	ACRYGT	1 cut(s)	1647
AgeI	ACCGGT	1 cut(s)	1671
AgsI	TTSAA	7 cut(s)	496, 599, 615, 1031, 1093, 1321, 1454
AjnI	CCWGG	1 cut(s)	1012
AjuI	GAANNNNNNNTTGG	2 cut(s)	943, 975
Alw21I	GWGCWC	2 cut(s)	913, 1117
Alw26I	GTCTC	4 cut(s)	459, 771, 1241, 1680
AlwI	GGATC	3 cut(s)	243, 582, 1199
AlwNI	CAGNNNCTG	2 cut(s)	524, 1426
Ama87I	CYCGRG	3 cut(s)	104, 462, 914
Aor51HI	AGCGCT	1 cut(s)	967
AoxI	GGCC	4 cut(s)	249, 338, 606, 1001
ApeKI	GCWGC	5 cut(s)	87, 308, 745, 919, 1226
ApoI	RAATTY	6 cut(s)	300, 536, 765, 1247, 1660, 1691
AsiGI	ACCGGT	1 cut(s)	1671
Asp700I	GAANNNNTTC	1 cut(s)	1035
AspLEI	GCGC	1 cut(s)	968
AspS9I	GGNCC	1 cut(s)	502
AsuC2I	CCSGG	1 cut(s)	1467
AvaI	CYCGRG	3 cut(s)	104, 462, 914
AvaII	GGWCC	1 cut(s)	502
BaeGI	GKGCMC	1 cut(s)	1190
BalI	TGGCCA	1 cut(s)	608
BanII	GRGCYC	4 cut(s)	138, 913, 1117, 1467
BbsI	GAAGAC	2 cut(s)	190, 1130
Bbv12I	GWGCWC	2 cut(s)	913, 1117
BbvI	GCAGC	5 cut(s)	74, 295, 757, 906, 1238
BccI	CCATC	3 cut(s)	200, 326, 1075
BceAI	ACGGC	1 cut(s)	235
BciT130I	CCWGG	1 cut(s)	1014
BcnI	CCSGG	1 cut(s)	1467
BcoDI	GTCTC	4 cut(s)	459, 771, 1241, 1680
BfaI	CTAG	8 cut(s)	288, 1232, 1325, 1356, 1374, 1479, 1494, 1509
BfmI	CTRYAG	3 cut(s)	442, 743, 933
BfoI	RGCGCY	1 cut(s)	969
BfrI	CTTAAG	2 cut(s)	590, 1151
BglI	GCCNNNNNGGC	1 cut(s)	346
BisI	GCNGC	6 cut(s)	88, 309, 687, 746, 920, 1227
BlpI	GCTNAGC	1 cut(s)	1440
BlsI	GCNGC	6 cut(s)	89, 310, 688, 747, 921, 1228
Bme1390I	CCNGG	2 cut(s)	1014, 1467
Bme18I	GGWCC	1 cut(s)	502
BmeT110I	CYCGRG	3 cut(s)	104, 462, 914
BmgT120I	GGNCC	1 cut(s)	502
BmiI	GGNNCC	3 cut(s)	118, 390, 439
BmrFI	CCNGG	2 cut(s)	1014, 1467
BmrI	ACTGGG	3 cut(s)	234, 1128, 1538
BmsI	GCATC	7 cut(s)	289, 733, 781, 880, 962, 1418, 1629
BmuI	ACTGGG	3 cut(s)	234, 1128, 1538
BpiI	GAAGAC	2 cut(s)	190, 1130
BpmI	CTGGAG	1 cut(s)	1448
Bpu1102I	GCTNAGC	1 cut(s)	1440
BpuEI	CTTGAG	1 cut(s)	131
BpuMI	CCSGG	1 cut(s)	1467
Bsa29I	ATCGAT	1 cut(s)	19
BsaI	GGTCTC	2 cut(s)	1241, 1680
BsaJI	CCNNGG	3 cut(s)	81, 1173, 1266
BsaWI	WCCGGW	1 cut(s)	1671
Bse118I	RCCGGY	1 cut(s)	1671
Bse1I	ACTGG	5 cut(s)	229, 481, 1085, 1134, 1544
Bse3DI	GCAATG	1 cut(s)	454
BseBI	CCWGG	1 cut(s)	1014
BseCI	ATCGAT	1 cut(s)	19
BseDI	CCNNGG	3 cut(s)	81, 1173, 1266
BseGI	GGATG	7 cut(s)	41, 208, 280, 577, 871, 977, 1487
BseMI	GCAATG	1 cut(s)	454
BseMII	CTCAG	5 cut(s)	191, 516, 672, 1062, 1431
BseNI	ACTGG	5 cut(s)	229, 481, 1085, 1134, 1544
BseRI	GAGGAG	1 cut(s)	1322
BseSI	GKGCMC	1 cut(s)	1190
BseXI	GCAGC	5 cut(s)	74, 295, 757, 906, 1238
BsgI	GTGCAG	1 cut(s)	1245
Bsh1236I	CGCG	1 cut(s)	1120
BshFI	GGCC	4 cut(s)	251, 340, 608, 1003
BshTI	ACCGGT	1 cut(s)	1671
BshVI	ATCGAT	1 cut(s)	19
BsiHKAI	GWGCWC	2 cut(s)	913, 1117
BsiHKCI	CYCGRG	3 cut(s)	104, 462, 914
BsiSI	CCGG	3 cut(s)	1467, 1513, 1672
BslFI	GGGAC	2 cut(s)	485, 1555
BsmAI	GTCTC	4 cut(s)	459, 771, 1241, 1680
BsmFI	GGGAC	2 cut(s)	485, 1555
BsmI	GAATGC	2 cut(s)	178, 624
BsnI	GGCC	4 cut(s)	251, 340, 608, 1003
Bso31I	GGTCTC	2 cut(s)	1241, 1680
BsoBI	CYCGRG	3 cut(s)	104, 462, 914
Bsp1286I	GDGCHC	5 cut(s)	138, 913, 1117, 1190, 1467
Bsp1407I	TGTACA	1 cut(s)	1650
Bsp143I	GATC	6 cut(s)	20, 235, 574, 757, 955, 1204
Bsp1720I	GCTNAGC	1 cut(s)	1440
Bsp19I	CCATGG	1 cut(s)	81
BspACI	CCGC	5 cut(s)	74, 191, 687, 1118, 1393
BspANI	GGCC	4 cut(s)	251, 340, 608, 1003
BspCNI	CTCAG	5 cut(s)	190, 517, 671, 1063, 1432
BspDI	ATCGAT	1 cut(s)	19
BspFNI	CGCG	1 cut(s)	1120
BspLI	GGNNCC	3 cut(s)	118, 390, 439
BspMAI	CTGCAG	1 cut(s)	747
BspPI	GGATC	3 cut(s)	243, 582, 1199
BspQI	GCTCTTC	1 cut(s)	1455
BspTI	CTTAAG	2 cut(s)	590, 1151
BspTNI	GGTCTC	2 cut(s)	1241, 1680
BsrBI	CCGCTC	1 cut(s)	76
BsrDI	GCAATG	1 cut(s)	454
BsrFI	RCCGGY	1 cut(s)	1671
BsrGI	TGTACA	1 cut(s)	1650
BsrI	ACTGG	5 cut(s)	229, 481, 1085, 1134, 1544
BssAI	RCCGGY	1 cut(s)	1671
BssECI	CCNNGG	3 cut(s)	81, 1173, 1266
BssMI	GATC	6 cut(s)	20, 235, 574, 757, 955, 1204
BssT1I	CCWWGG	3 cut(s)	81, 1173, 1266
Bst2UI	CCWGG	1 cut(s)	1014
Bst4CI	ACNGT	3 cut(s)	116, 1371, 1643
Bst6I	CTCTTC	3 cut(s)	40, 1197, 1455
BstAFI	CTTAAG	2 cut(s)	590, 1151
BstAPI	GCANNNNNTGC	1 cut(s)	730
BstAUI	TGTACA	1 cut(s)	1650
BstC8I	GCNNGC	4 cut(s)	338, 382, 843, 1618
BstDEI	CTNAG	6 cut(s)	177, 525, 658, 1071, 1440, 1575
BstDSI	CCRYGG	1 cut(s)	81
BstF5I	GGATG	7 cut(s)	41, 208, 280, 577, 871, 977, 1487
BstFNI	CGCG	1 cut(s)	1120
BstH2I	RGCGCY	1 cut(s)	969
BstHHI	GCGC	1 cut(s)	968
BstKTI	GATC	6 cut(s)	23, 238, 577, 760, 958, 1207
BstMAI	GTCTC	4 cut(s)	459, 771, 1241, 1680
BstMBI	GATC	6 cut(s)	20, 235, 574, 757, 955, 1204
BstMWI	GCNNNNNNNGC	6 cut(s)	142, 346, 730, 972, 1009, 1622
BstNI	CCWGG	1 cut(s)	1014
BstNSI	RCATGY	2 cut(s)	1275, 1651
BstSCI	CCNGG	2 cut(s)	1012, 1465
BstSFI	CTRYAG	3 cut(s)	442, 743, 933
BstSLI	GKGCMC	1 cut(s)	1190
BstUI	CGCG	1 cut(s)	1120
BstV1I	GCAGC	5 cut(s)	74, 295, 757, 906, 1238
BstV2I	GAAGAC	2 cut(s)	190, 1130
BstX2I	RGATCY	1 cut(s)	1204
BstXI	CCANNNNNNTGG	2 cut(s)	130, 761
BstYI	RGATCY	1 cut(s)	1204
Bsu15I	ATCGAT	1 cut(s)	19
BsuRI	GGCC	4 cut(s)	251, 340, 608, 1003
BsuTUI	ATCGAT	1 cut(s)	19
BtgI	CCRYGG	1 cut(s)	81
BtgZI	GCGATG	1 cut(s)	1606
BtsCI	GGATG	7 cut(s)	41, 208, 280, 577, 871, 977, 1487
BtsI	GCAGTG	3 cut(s)	217, 748, 1228
BtsIMutI	CAGTG	7 cut(s)	217, 222, 351, 474, 748, 1228, 1648
Cac8I	GCNNGC	4 cut(s)	338, 382, 843, 1618
CaiI	CAGNNNCTG	2 cut(s)	524, 1426
CfoI	GCGC	1 cut(s)	968
Cfr10I	RCCGGY	1 cut(s)	1671
Cfr13I	GGNCC	1 cut(s)	502
ClaI	ATCGAT	1 cut(s)	19
CseI	GACGC	2 cut(s)	79, 964
Csp6I	GTAC	3 cut(s)	904, 1485, 1651
CspAI	ACCGGT	1 cut(s)	1671
CviAII	CATG	5 cut(s)	82, 652, 755, 1272, 1648
CviQI	GTAC	3 cut(s)	904, 1485, 1651
DdeI	CTNAG	6 cut(s)	177, 525, 658, 1071, 1440, 1575
DpnI	GATC	6 cut(s)	22, 237, 576, 759, 957, 1206
DpnII	GATC	6 cut(s)	20, 235, 574, 757, 955, 1204
DrdI	GACNNNNNNGTC	1 cut(s)	326
DseDI	GACNNNNNNGTC	1 cut(s)	326
EaeI	YGGCCR	2 cut(s)	249, 606
Eam1104I	CTCTTC	3 cut(s)	40, 1197, 1455
EarI	CTCTTC	3 cut(s)	40, 1197, 1455
Ecl136II	GAGCTC	2 cut(s)	911, 1115
Eco130I	CCWWGG	3 cut(s)	81, 1173, 1266
Eco24I	GRGCYC	4 cut(s)	138, 913, 1117, 1467
Eco31I	GGTCTC	2 cut(s)	1241, 1680
Eco47I	GGWCC	1 cut(s)	502
Eco47III	AGCGCT	1 cut(s)	967
Eco53kI	GAGCTC	2 cut(s)	911, 1115
Eco57I	CTGAAG	1 cut(s)	1124
Eco88I	CYCGRG	3 cut(s)	104, 462, 914
EcoICRI	GAGCTC	2 cut(s)	911, 1115
EcoRI	GAATTC	1 cut(s)	1247
EcoRII	CCWGG	1 cut(s)	1012
EcoT14I	CCWWGG	3 cut(s)	81, 1173, 1266
EcoT22I	ATGCAT	1 cut(s)	726
EcoT38I	GRGCYC	4 cut(s)	138, 913, 1117, 1467
ErhI	CCWWGG	3 cut(s)	81, 1173, 1266
FaeI	CATG	5 cut(s)	85, 655, 758, 1275, 1651
FaqI	GGGAC	2 cut(s)	485, 1555
FatI	CATG	5 cut(s)	81, 651, 754, 1271, 1647
FblI	GTMKAC	1 cut(s)	1288
Fnu4HI	GCNGC	6 cut(s)	88, 309, 687, 746, 920, 1227
FokI	GGATG	7 cut(s)	28, 215, 267, 564, 858, 984, 1474
FriOI	GRGCYC	4 cut(s)	138, 913, 1117, 1467
Fsp4HI	GCNGC	6 cut(s)	88, 309, 687, 746, 920, 1227
FspBI	CTAG	8 cut(s)	288, 1232, 1325, 1356, 1374, 1479, 1494, 1509
GlaI	GCGC	1 cut(s)	967
GluI	GCNGC	6 cut(s)	88, 309, 687, 746, 920, 1227
GsuI	CTGGAG	1 cut(s)	1448
HaeII	RGCGCY	1 cut(s)	969
HaeIII	GGCC	4 cut(s)	251, 340, 608, 1003
HapII	CCGG	3 cut(s)	1467, 1513, 1672
HgaI	GACGC	2 cut(s)	79, 964
HhaI	GCGC	1 cut(s)	968
Hin1II	CATG	5 cut(s)	85, 655, 758, 1275, 1651
Hin6I	GCGC	1 cut(s)	966
HinP1I	GCGC	1 cut(s)	966
HindIII	AAGCTT	3 cut(s)	593, 1052, 1094
HinfI	GANTC	2 cut(s)	404, 1145
HpaII	CCGG	3 cut(s)	1467, 1513, 1672
Hpy166II	GTNNAC	4 cut(s)	454, 993, 1289, 1501
Hpy188I	TCNGA	4 cut(s)	180, 520, 661, 1072
Hpy188III	TCNNGA	9 cut(s)	464, 615, 776, 914, 1142, 1348, 1356, 1374, 1585
Hpy8I	GTNNAC	4 cut(s)	454, 993, 1289, 1501
Hpy99I	CGWCG	1 cut(s)	323
HpyAV	CCTTC	5 cut(s)	40, 428, 493, 593, 1173
HpyCH4III	ACNGT	3 cut(s)	116, 1371, 1643
HpyCH4IV	ACGT	2 cut(s)	372, 1384
HpyCH4V	TGCA	7 cut(s)	622, 655, 724, 745, 772, 1226, 1409
HpyF10VI	GCNNNNNNNGC	6 cut(s)	142, 346, 730, 972, 1009, 1622
HpyF3I	CTNAG	6 cut(s)	177, 525, 658, 1071, 1440, 1575
HpySE526I	ACGT	2 cut(s)	372, 1384
Hsp92II	CATG	5 cut(s)	85, 655, 758, 1275, 1651
HspAI	GCGC	1 cut(s)	966
Kzo9I	GATC	6 cut(s)	20, 235, 574, 757, 955, 1204
LguI	GCTCTTC	1 cut(s)	1455
LmnI	GCTCC	5 cut(s)	81, 916, 963, 1120, 1423
Lsp1109I	GCAGC	5 cut(s)	74, 295, 757, 906, 1238
LweI	GCATC	7 cut(s)	289, 733, 781, 880, 962, 1418, 1629
MaeI	CTAG	8 cut(s)	288, 1232, 1325, 1356, 1374, 1479, 1494, 1509
MaeII	ACGT	2 cut(s)	372, 1384
MaeIII	GTNAC	4 cut(s)	215, 892, 1274, 1643
MalI	GATC	6 cut(s)	22, 237, 576, 759, 957, 1206
MbiI	CCGCTC	1 cut(s)	76
MboI	GATC	6 cut(s)	20, 235, 574, 757, 955, 1204
MflI	RGATCY	1 cut(s)	1204
MhlI	GDGCHC	5 cut(s)	138, 913, 1117, 1190, 1467
MlsI	TGGCCA	1 cut(s)	608
MluNI	TGGCCA	1 cut(s)	608
MlyI	GAGTC	1 cut(s)	398
MmeI	TCCRAC	2 cut(s)	928, 1581
Mox20I	TGGCCA	1 cut(s)	608
Mph1103I	ATGCAT	1 cut(s)	726
MroXI	GAANNNNTTC	1 cut(s)	1035
MscI	TGGCCA	1 cut(s)	608
MseI	TTAA	8 cut(s)	534, 563, 591, 783, 1050, 1152, 1548, 1668
MslI	CAYNNNNRTG	3 cut(s)	582, 753, 759
Msp20I	TGGCCA	1 cut(s)	608
MspCI	CTTAAG	2 cut(s)	590, 1151
MspI	CCGG	3 cut(s)	1467, 1513, 1672
MspR9I	CCNGG	2 cut(s)	1014, 1467
Mva1269I	GAATGC	2 cut(s)	178, 624
MvaI	CCWGG	1 cut(s)	1014
MvnI	CGCG	1 cut(s)	1120
MwoI	GCNNNNNNNGC	6 cut(s)	142, 346, 730, 972, 1009, 1622
NciI	CCSGG	1 cut(s)	1467
NcoI	CCATGG	1 cut(s)	81
NdeII	GATC	6 cut(s)	20, 235, 574, 757, 955, 1204
NlaIII	CATG	5 cut(s)	85, 655, 758, 1275, 1651
NlaIV	GGNNCC	3 cut(s)	118, 390, 439
NmeAIII	GCCGAG	2 cut(s)	219, 277
NmuCI	GTSAC	3 cut(s)	892, 1274, 1643
NsiI	ATGCAT	1 cut(s)	726
NspI	RCATGY	2 cut(s)	1275, 1651
PaeR7I	CTCGAG	1 cut(s)	462
PciI	ACATGT	1 cut(s)	1647
PciSI	GCTCTTC	1 cut(s)	1455
PcsI	WCGNNNNNNNCGW	2 cut(s)	327, 1117
PctI	GAATGC	2 cut(s)	178, 624
PdmI	GAANNNNTTC	1 cut(s)	1035
PfeI	GAWTC	1 cut(s)	1145
PinAI	ACCGGT	1 cut(s)	1671
PkrI	GCNGC	6 cut(s)	89, 310, 688, 747, 921, 1228
PleI	GAGTC	1 cut(s)	398
PpsI	GAGTC	1 cut(s)	398
PscI	ACATGT	1 cut(s)	1647
PsiI	TTATAA	1 cut(s)	1632
Psp124BI	GAGCTC	2 cut(s)	913, 1117
Psp6I	CCWGG	1 cut(s)	1012
PspGI	CCWGG	1 cut(s)	1012
PspN4I	GGNNCC	3 cut(s)	118, 390, 439
PspPI	GGNCC	1 cut(s)	502
PstI	CTGCAG	1 cut(s)	747
PstNI	CAGNNNCTG	2 cut(s)	524, 1426
PsuI	RGATCY	1 cut(s)	1204
RsaI	GTAC	3 cut(s)	905, 1486, 1652
RsaNI	GTAC	3 cut(s)	904, 1485, 1651
RseI	CAYNNNNRTG	3 cut(s)	582, 753, 759
SacI	GAGCTC	2 cut(s)	913, 1117
SapI	GCTCTTC	1 cut(s)	1455
SaqAI	TTAA	8 cut(s)	534, 563, 591, 783, 1050, 1152, 1548, 1668
SatI	GCNGC	6 cut(s)	88, 309, 687, 746, 920, 1227
Sau3AI	GATC	6 cut(s)	20, 235, 574, 757, 955, 1204
Sau96I	GGNCC	1 cut(s)	502
SchI	GAGTC	1 cut(s)	398
ScrFI	CCNGG	2 cut(s)	1014, 1467
SduI	GDGCHC	5 cut(s)	138, 913, 1117, 1190, 1467
SfaNI	GCATC	7 cut(s)	289, 733, 781, 880, 962, 1418, 1629
SfcI	CTRYAG	3 cut(s)	442, 743, 933
Sfr274I	CTCGAG	1 cut(s)	462
SinI	GGWCC	1 cut(s)	502
SlaI	CTCGAG	1 cut(s)	462
SmiMI	CAYNNNNRTG	3 cut(s)	582, 753, 759
SmlI	CTYRAG	4 cut(s)	146, 462, 590, 1151
SmoI	CTYRAG	4 cut(s)	146, 462, 590, 1151
SsiI	CCGC	5 cut(s)	74, 191, 687, 1118, 1393
SspI	AATATT	1 cut(s)	361
SspMI	CTAG	8 cut(s)	288, 1232, 1325, 1356, 1374, 1479, 1494, 1509
SstI	GAGCTC	2 cut(s)	913, 1117
StyD4I	CCNGG	2 cut(s)	1012, 1465
StyI	CCWWGG	3 cut(s)	81, 1173, 1266
TaaI	ACNGT	3 cut(s)	116, 1371, 1643
TaiI	ACGT	2 cut(s)	375, 1387
TatI	WGTACW	2 cut(s)	1484, 1650
TauI	GCSGC	1 cut(s)	689
TfiI	GAWTC	1 cut(s)	1145
Tru1I	TTAA	8 cut(s)	534, 563, 591, 783, 1050, 1152, 1548, 1668
Tru9I	TTAA	8 cut(s)	534, 563, 591, 783, 1050, 1152, 1548, 1668
TscAI	CASTG	7 cut(s)	217, 229, 358, 481, 755, 1228, 1648
TseFI	GTSAC	3 cut(s)	892, 1274, 1643
TseI	GCWGC	5 cut(s)	87, 308, 745, 919, 1226
Tsp45I	GTSAC	3 cut(s)	892, 1274, 1643
TspDTI	ATGAA	8 cut(s)	27, 125, 640, 1028, 1113, 1155, 1260, 1473
TspGWI	ACGGA	1 cut(s)	494
TspRI	CASTG	7 cut(s)	217, 229, 358, 481, 755, 1228, 1648
Vha464I	CTTAAG	2 cut(s)	590, 1151
VpaK11BI	GGWCC	1 cut(s)	502
XapI	RAATTY	6 cut(s)	300, 536, 765, 1247, 1660, 1691
XbaI	TCTAGA	2 cut(s)	1355, 1373
XceI	RCATGY	2 cut(s)	1275, 1651
XcmI	CCANNNNNNNNNTGG	3 cut(s)	127, 373, 1423
XhoI	CTCGAG	1 cut(s)	462
XmiI	GTMKAC	1 cut(s)	1288
XmnI	GAANNNNTTC	1 cut(s)	1035
XspI	CTAG	8 cut(s)	288, 1232, 1325, 1356, 1374, 1479, 1494, 1509
Zsp2I	ATGCAT	1 cut(s)	726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.