Rh6CG154800

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
20086536 .. 20086754
219 bp
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UTR
Exon/CDS
Intron
Rh6CG154800.1

Sequence Viewer

Length: 219 bp
ATGGCGTTCGACTATGCGGTCCAGATCAGTTGCGACAGGTTCAGTTCCATGCGCTCGATGTGGAAGATCAAGCGGTCTTTCAGAATTGGGTCGGAAAGCCATCTCCGCGGTGTGGTCTCCAACGTCCGAGAGTTTGCGAACACCATCGTCAGACAAAAGAAACGCGAACTAGACGAGAAGAAGACTCTAGATCTCACGACCTGCTGTCTCGGTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

72

Amino Acids

8.36

Weight (kDa)

9.73

Isoelectric Point (pI)

53.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020590)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0268161
rosa_rugosa Rorug06G0039300
rosa_samantha Rh6AG159200 Rh6AG312100 Rh6BG319000 Rh6CG154800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 209
AccII CGCG 2 cut(s) 108, 165
AciI CCGC 4 cut(s) 17, 73, 106, 108
AfiI CCNNNNNNNGG 1 cut(s) 112
AhdI GACNNNNNGTC 1 cut(s) 204
Alw26I GTCTC 2 cut(s) 121, 212
AspLEI GCGC 1 cut(s) 54
AspS9I GGNCC 1 cut(s) 19
AvaII GGWCC 1 cut(s) 19
BbsI GAAGAC 1 cut(s) 188
BccI CCATC 2 cut(s) 108, 152
BcoDI GTCTC 2 cut(s) 121, 212
BfaI CTAG 2 cut(s) 170, 188
BfuAI ACCTGC 1 cut(s) 209
BglII AGATCT 1 cut(s) 190
Bme18I GGWCC 1 cut(s) 19
BmeRI GACNNNNNGTC 1 cut(s) 204
BmgT120I GGNCC 1 cut(s) 19
BpiI GAAGAC 1 cut(s) 188
BsaI GGTCTC 1 cut(s) 121
BsaJI CCNNGG 1 cut(s) 106
Bsc4I CCNNNNNNNGG 1 cut(s) 112
BseDI CCNNGG 1 cut(s) 106
BseLI CCNNNNNNNGG 1 cut(s) 112
Bsh1236I CGCG 2 cut(s) 108, 165
BslI CCNNNNNNNGG 1 cut(s) 112
BsmAI GTCTC 2 cut(s) 121, 212
Bso31I GGTCTC 1 cut(s) 121
Bsp143I GATC 3 cut(s) 24, 66, 190
BspACI CCGC 4 cut(s) 17, 73, 106, 108
BspFNI CGCG 2 cut(s) 108, 165
BspMI ACCTGC 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 121
BssECI CCNNGG 1 cut(s) 106
BssMI GATC 3 cut(s) 24, 66, 190
BstDSI CCRYGG 1 cut(s) 106
BstFNI CGCG 2 cut(s) 108, 165
BstHHI GCGC 1 cut(s) 54
BstKTI GATC 3 cut(s) 27, 69, 193
BstMAI GTCTC 2 cut(s) 121, 212
BstMBI GATC 3 cut(s) 24, 66, 190
BstMWI GCNNNNNNNGC 1 cut(s) 105
BstUI CGCG 2 cut(s) 108, 165
BstV2I GAAGAC 1 cut(s) 188
BstX2I RGATCY 1 cut(s) 190
BstYI RGATCY 1 cut(s) 190
BtgI CCRYGG 1 cut(s) 106
BveI ACCTGC 1 cut(s) 209
CfoI GCGC 1 cut(s) 54
Cfr13I GGNCC 1 cut(s) 19
Cfr42I CCGCGG 1 cut(s) 109
CviAII CATG 1 cut(s) 49
CviJI RGCY 1 cut(s) 99
CviKI_1 RGCY 1 cut(s) 99
DpnI GATC 3 cut(s) 26, 68, 192
DpnII GATC 3 cut(s) 24, 66, 190
DrdI GACNNNNNNGTC 1 cut(s) 17
DriI GACNNNNNGTC 1 cut(s) 204
DseDI GACNNNNNNGTC 1 cut(s) 17
Eam1105I GACNNNNNGTC 1 cut(s) 204
Eco31I GGTCTC 1 cut(s) 121
Eco47I GGWCC 1 cut(s) 19
FaeI CATG 1 cut(s) 52
FaiI YATR 2 cut(s) 15, 50
FatI CATG 1 cut(s) 48
FspBI CTAG 2 cut(s) 170, 188
GlaI GCGC 1 cut(s) 53
HhaI GCGC 1 cut(s) 54
Hin1II CATG 1 cut(s) 52
Hin6I GCGC 1 cut(s) 52
HinP1I GCGC 1 cut(s) 52
HinfI GANTC 1 cut(s) 184
Hpy188I TCNGA 4 cut(s) 83, 94, 128, 152
Hpy188III TCNNGA 4 cut(s) 22, 188, 196, 216
HpyCH4IV ACGT 1 cut(s) 123
HpyF10VI GCNNNNNNNGC 1 cut(s) 105
HpySE526I ACGT 1 cut(s) 123
Hsp92II CATG 1 cut(s) 52
HspAI GCGC 1 cut(s) 52
KspI CCGCGG 1 cut(s) 109
Kzo9I GATC 3 cut(s) 24, 66, 190
LpnPI CCDG 3 cut(s) 22, 35, 214
MaeI CTAG 2 cut(s) 170, 188
MaeII ACGT 1 cut(s) 123
MalI GATC 3 cut(s) 26, 68, 192
MboI GATC 3 cut(s) 24, 66, 190
MboII GAAGA 3 cut(s) 76, 190, 193
MflI RGATCY 1 cut(s) 190
MluCI AATT 1 cut(s) 84
MlyI GAGTC 1 cut(s) 178
MmeI TCCRAC 2 cut(s) 72, 144
MspA1I CMGCKG 1 cut(s) 108
MvnI CGCG 2 cut(s) 108, 165
MwoI GCNNNNNNNGC 1 cut(s) 105
NdeII GATC 3 cut(s) 24, 66, 190
NlaIII CATG 1 cut(s) 52
PleI GAGTC 1 cut(s) 178
PpsI GAGTC 1 cut(s) 178
PspPI GGNCC 1 cut(s) 19
PsuI RGATCY 1 cut(s) 190
SacII CCGCGG 1 cut(s) 109
Sau3AI GATC 3 cut(s) 24, 66, 190
Sau96I GGNCC 1 cut(s) 19
SchI GAGTC 1 cut(s) 178
SetI ASST 3 cut(s) 41, 126, 203
Sfr303I CCGCGG 1 cut(s) 109
SgrBI CCGCGG 1 cut(s) 109
SinI GGWCC 1 cut(s) 19
Sse9I AATT 1 cut(s) 84
SsiI CCGC 4 cut(s) 17, 73, 106, 108
SspMI CTAG 2 cut(s) 170, 188
TaiI ACGT 1 cut(s) 126
TaqI TCGA 2 cut(s) 9, 56
TasI AATT 1 cut(s) 84
VpaK11BI GGWCC 1 cut(s) 19
XbaI TCTAGA 1 cut(s) 187
XspI CTAG 2 cut(s) 170, 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.