COP9 signalosome complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_ssc0000050.1_g000031 |
| rosa_samantha | Rh6BG098200 Rh6CG059000 Rh6DG055800 Rh6DG055900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 248, 261 |
| AfaI | GTAC | 1 cut(s) | 296 |
| AgsI | TTSAA | 3 cut(s) | 194, 278, 285 |
| AluBI | AGCT | 1 cut(s) | 243 |
| AluI | AGCT | 1 cut(s) | 243 |
| AlwI | GGATC | 2 cut(s) | 248, 261 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 93 |
| AsuHPI | GGTGA | 1 cut(s) | 212 |
| AsuII | TTCGAA | 1 cut(s) | 97 |
| BamHI | GGATCC | 1 cut(s) | 253 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 156, 188 |
| BccI | CCATC | 2 cut(s) | 191, 224 |
| BfaI | CTAG | 1 cut(s) | 30 |
| BfmI | CTRYAG | 1 cut(s) | 37 |
| BmcAI | AGTACT | 1 cut(s) | 296 |
| BmiI | GGNNCC | 1 cut(s) | 255 |
| Bpu14I | TTCGAA | 1 cut(s) | 97 |
| BpuEI | CTTGAG | 1 cut(s) | 83 |
| Bse1I | ACTGG | 1 cut(s) | 49 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseNI | ACTGG | 1 cut(s) | 49 |
| Bsp119I | TTCGAA | 1 cut(s) | 97 |
| Bsp143I | GATC | 3 cut(s) | 58, 253, 264 |
| BspCNI | CTCAG | 1 cut(s) | 67 |
| BspHI | TCATGA | 1 cut(s) | 247 |
| BspLI | GGNNCC | 1 cut(s) | 255 |
| BspPI | GGATC | 2 cut(s) | 248, 261 |
| BspT104I | TTCGAA | 1 cut(s) | 97 |
| BsrI | ACTGG | 1 cut(s) | 49 |
| BssMI | GATC | 3 cut(s) | 58, 253, 264 |
| BstBI | TTCGAA | 1 cut(s) | 97 |
| BstC8I | GCNNGC | 1 cut(s) | 129 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstKTI | GATC | 3 cut(s) | 61, 256, 267 |
| BstMBI | GATC | 3 cut(s) | 58, 253, 264 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstSFI | CTRYAG | 1 cut(s) | 37 |
| BstX2I | RGATCY | 1 cut(s) | 253 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 230 |
| BstYI | RGATCY | 1 cut(s) | 253 |
| BtsIMutI | CAGTG | 1 cut(s) | 42 |
| Cac8I | GCNNGC | 1 cut(s) | 129 |
| CciI | TCATGA | 1 cut(s) | 247 |
| CseI | GACGC | 1 cut(s) | 42 |
| Csp6I | GTAC | 1 cut(s) | 295 |
| CviAII | CATG | 3 cut(s) | 85, 142, 248 |
| CviJI | RGCY | 3 cut(s) | 29, 131, 243 |
| CviKI_1 | RGCY | 3 cut(s) | 29, 131, 243 |
| CviQI | GTAC | 1 cut(s) | 295 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| DpnI | GATC | 3 cut(s) | 60, 255, 266 |
| DpnII | GATC | 3 cut(s) | 58, 253, 264 |
| FaeI | CATG | 3 cut(s) | 88, 145, 251 |
| FaiI | YATR | 8 cut(s) | 20, 39, 82, 86, 134, 143, 147, 249 |
| FatI | CATG | 3 cut(s) | 84, 141, 247 |
| FspBI | CTAG | 1 cut(s) | 30 |
| HgaI | GACGC | 1 cut(s) | 42 |
| Hin1II | CATG | 3 cut(s) | 88, 145, 251 |
| HinfI | GANTC | 4 cut(s) | 77, 117, 190, 278 |
| HphI | GGTGA | 1 cut(s) | 212 |
| Hpy188III | TCNNGA | 3 cut(s) | 62, 194, 248 |
| HpyCH4V | TGCA | 2 cut(s) | 153, 212 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| Hsp92II | CATG | 3 cut(s) | 88, 145, 251 |
| Kzo9I | GATC | 3 cut(s) | 58, 253, 264 |
| LpnPI | CCDG | 4 cut(s) | 30, 113, 161, 236 |
| MaeI | CTAG | 1 cut(s) | 30 |
| MaeIII | GTNAC | 1 cut(s) | 6 |
| MalI | GATC | 3 cut(s) | 60, 255, 266 |
| MboI | GATC | 3 cut(s) | 58, 253, 264 |
| MboII | GAAGA | 2 cut(s) | 273, 281 |
| MfeI | CAATTG | 1 cut(s) | 185 |
| MflI | RGATCY | 1 cut(s) | 253 |
| MluCI | AATT | 5 cut(s) | 23, 69, 109, 185, 216 |
| MlyI | GAGTC | 2 cut(s) | 86, 111 |
| MnlI | CCTC | 1 cut(s) | 244 |
| MroXI | GAANNNNTTC | 1 cut(s) | 93 |
| MseI | TTAA | 2 cut(s) | 159, 219 |
| MunI | CAATTG | 1 cut(s) | 185 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NdeII | GATC | 3 cut(s) | 58, 253, 264 |
| NlaIII | CATG | 3 cut(s) | 88, 145, 251 |
| NlaIV | GGNNCC | 1 cut(s) | 255 |
| NspV | TTCGAA | 1 cut(s) | 97 |
| PagI | TCATGA | 1 cut(s) | 247 |
| PdmI | GAANNNNTTC | 1 cut(s) | 93 |
| PfeI | GAWTC | 2 cut(s) | 190, 278 |
| PleI | GAGTC | 2 cut(s) | 85, 111 |
| PpsI | GAGTC | 2 cut(s) | 85, 111 |
| PspN4I | GGNNCC | 1 cut(s) | 255 |
| PsuI | RGATCY | 1 cut(s) | 253 |
| RsaI | GTAC | 1 cut(s) | 296 |
| RsaNI | GTAC | 1 cut(s) | 295 |
| SaqAI | TTAA | 2 cut(s) | 159, 219 |
| Sau3AI | GATC | 3 cut(s) | 58, 253, 264 |
| ScaI | AGTACT | 1 cut(s) | 296 |
| SchI | GAGTC | 2 cut(s) | 86, 111 |
| SetI | ASST | 2 cut(s) | 180, 245 |
| SfcI | CTRYAG | 1 cut(s) | 37 |
| SfuI | TTCGAA | 1 cut(s) | 97 |
| SmlI | CTYRAG | 1 cut(s) | 62 |
| SmoI | CTYRAG | 1 cut(s) | 62 |
| Sse9I | AATT | 5 cut(s) | 23, 69, 109, 185, 216 |
| SspI | AATATT | 1 cut(s) | 92 |
| SspMI | CTAG | 1 cut(s) | 30 |
| TaqI | TCGA | 2 cut(s) | 97, 267 |
| TasI | AATT | 5 cut(s) | 23, 69, 109, 185, 216 |
| TatI | WGTACW | 1 cut(s) | 294 |
| TfiI | GAWTC | 2 cut(s) | 190, 278 |
| Tru1I | TTAA | 2 cut(s) | 159, 219 |
| Tru9I | TTAA | 2 cut(s) | 159, 219 |
| TscAI | CASTG | 1 cut(s) | 49 |
| TspDTI | ATGAA | 2 cut(s) | 130, 236 |
| TspRI | CASTG | 1 cut(s) | 49 |
| XmnI | GAANNNNTTC | 1 cut(s) | 93 |
| XspI | CTAG | 1 cut(s) | 30 |
| ZrmI | AGTACT | 1 cut(s) | 296 |