Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0012751

Physical Location & Seq

Genomic Coordinates Reverse (-)

44663111 .. 44667400

Gene Structure 4290 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG256500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGCCCTCCTTTTGTTTCTTCAACTTGGTCATCCTCGTCTGCTCATTGCCTCCTGCTTTGGGTGCCGACCCCTACGTGTTCTATGATTGGACCGTCTCCTACATCACTGCTGCTCCACTTGGAGTTAAGCAAAAGGTTATTGGGATTAATGGAGAGTTTCCAGGACCGTTGCTTAATGTGACTACAAATTGGAATGTTGTTATCAACGTGAAGAATGACCTGGATGAGCCATTGCTTCTCACGTGGAATGGAATACAGCATAGGAAAAACTGTTGGCAAGATGGTGTTTCGGGGACTAATTGTCCAATTCAGGCTGGTTGGAATTGGACATATGACTTTCAGGTTAAAGATCAGATAGGGAGTTTCTTTTATTTCCCTTCCCTAAGCTTCCAGAGAGCTGCAGGTGGATATGGGGGAATCATCATAAATAACAGAGCTATTATTCCGCTACCTTTTGCGGTGCCAGATGCAGATGTTACTCTCTTTATTACAGACTGGTATACAAAGAGTCATAAGGAACTACGGAAAGATGTTGAAAGTGGAACTAACCTAGGAATTCCTGACGGCATCCTCATCAACGGATTAGGTCCCTTTCGCTTTAATGAGGCAATTGTTCCAGACGGCTTTCCTTTCCTTACAATAAATGTTGAACCAGGAAAGACATACCGCTTCCGGGTGCACAACGTTGGCATCTCAACTAGCTTGAATTTCAGGATACAAAATCATAACTTACTCCTTGTGGAGACTGAAGGATCGTACACAGTTCAGCAGAACTATGCTAATATGGATATTCATGTTGGTCAGTCGTTTTCATTCTTGGTTACAATGGATCAGAATGCCAGCAGTGATTACTACGTTGTTGCCAGCCCTCGTTTTGTGAATTCATCTTCATGGGCTAAAGCGACTGGAGTTGCCATCTTACACTACTCCAATTCTCAGGGACCTGCATCAGGTCCTCTCCCTGATCCTCCTAATGATTTCGACACATATTTCTCAATGAATCAAGCAAGATCTATAAGGTGGAATGTCTCTGCTGGTGCTGCTCGTCCAAACCCGCAAGGTTCTTTTAAATATGGTGAAATTACCGTTACAGATTTCTACGTAATCCTAAACAGACCTGCAGAGCTTATAAATGGGAAGTGGCGCACAACCCTCAATGGTATTTCATATTTCACACCTTCGACACCGCTTAAGCTCGCCCAGCAATTCAACATTTCAGGAGTTTACAAGCTTGACTTTCCAAATAAATTGATGAACAGACCGGCGAAACTTGACACATCTTTAATAAATGGTACTTTCAAAGGTTTCATGGAAATCATCTTTCAGAACAATGATACCACTGTTCAGAACTACCATATGGATGGCTATGCATTTTTTGTCGTGGGTATGGATTTTGGAGTGTGGACAGAGAATAGCAGAGGCACTTACAACAAATGGGATGGCGTTGCTCGCTGCACTACACAGGTACCTTGGATCAAATGCTTTACTATTAAGAGCCAACTGCTTAGGACATTTTTCGTAGGAGACTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016491 GO:0016722 GO:0030054 GO:0030312 GO:0031090 GO:0031224 GO:0031225 GO:0031226 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0048046 GO:0048589 GO:0048856 GO:0048869 GO:0055044 GO:0055114 GO:0060560 GO:0071840 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

510

Amino Acids

57.15

Weight (kDa)

6.66

Isoelectric Point (pI)

29.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	32 - 145	3.5e-42	Multicopper oxidase
Cu-oxidase	PF00394	158 - 312	6.8e-45	Multicopper oxidase
Cu-oxidase_2	PF07731	395 - 490	1.1e-17	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48450 AT5G48450
fragaria_vesca	FvH4_2g17700 FvH4_2g17700
malus_domestica	MD05G1158300.v1.1
prunus_persica	Prupe.8G189700_v2.0.a1 Prupe.8G189700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0282691
rosa_laevigata	RLG00000012875
rosa_multiflora	Rmu_sc0003070.1_g000007 Rmu_sc0012099.1_g000005
rosa_roxburghii	Rroxscaffold_7G00186120
rosa_rugosa	Rorug06G0148600
rosa_samantha	Rh6AG262000 Rh6BG265100 Rh6CG264200 Rh6DG256500
rosa_wichuraiana	Rw6G022650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1130
AarI	CACCTGC	1 cut(s)	392
Acc36I	ACCTGC	3 cut(s)	392, 952, 1126
Acc65I	GGTACC	1 cut(s)	1465
AccB1I	GGYRCC	3 cut(s)	62, 460, 1465
AccI	GTMKAC	1 cut(s)	500
AciI	CCGC	5 cut(s)	446, 458, 667, 1055, 1187
AclI	AACGTT	1 cut(s)	684
AclWI	GGATC	4 cut(s)	760, 837, 959, 1481
AcsI	RAATTY	3 cut(s)	555, 706, 880
AcuI	CTGAAG	1 cut(s)	768
AcvI	CACGTG	1 cut(s)	243
AfaI	GTAC	3 cut(s)	758, 1294, 1467
AfiI	CCNNNNNNNGG	3 cut(s)	59, 673, 950
AflII	CTTAAG	1 cut(s)	1190
AflIII	ACRYGT	1 cut(s)	75
AgsI	TTSAA	6 cut(s)	22, 536, 650, 706, 1210, 1300
AhdI	GACNNNNNGTC	1 cut(s)	300
AjnI	CCWGG	3 cut(s)	160, 219, 652
AluBI	AGCT	7 cut(s)	387, 398, 437, 702, 1126, 1195, 1231
AluI	AGCT	7 cut(s)	387, 398, 437, 702, 1126, 1195, 1231
Alw21I	GWGCWC	1 cut(s)	681
Alw26I	GTCTC	4 cut(s)	100, 737, 1033, 1518
Alw44I	GTGCAC	1 cut(s)	677
AlwI	GGATC	4 cut(s)	760, 837, 959, 1481
ApaLI	GTGCAC	1 cut(s)	677
ApeKI	GCWGC	4 cut(s)	110, 398, 1040, 1452
ApoI	RAATTY	3 cut(s)	555, 706, 880
AseI	ATTAAT	1 cut(s)	147
Asp718I	GGTACC	1 cut(s)	1465
AspA2I	CCTAGG	1 cut(s)	550
AspLEI	GCGC	1 cut(s)	1146
AspS9I	GGNCC	5 cut(s)	90, 164, 587, 941, 953
AsuC2I	CCSGG	1 cut(s)	674
AsuHPI	GGTGA	1 cut(s)	1088
AvaII	GGWCC	5 cut(s)	90, 164, 587, 941, 953
AvrII	CCTAGG	1 cut(s)	550
BaeGI	GKGCMC	1 cut(s)	681
BaeI	ACNNNNGTAYC	4 cut(s)	1326, 1359, 1449, 1482
BanI	GGYRCC	3 cut(s)	62, 460, 1465
BbrPI	CACGTG	1 cut(s)	243
Bbv12I	GWGCWC	1 cut(s)	681
BbvI	GCAGC	4 cut(s)	97, 385, 1027, 1439
BccI	CCATC	4 cut(s)	275, 923, 1355, 1433
BceAI	ACGGC	2 cut(s)	580, 637
BciT130I	CCWGG	3 cut(s)	162, 221, 654
BciVI	GTATCC	1 cut(s)	708
BcnI	CCSGG	1 cut(s)	674
BcoDI	GTCTC	4 cut(s)	100, 737, 1033, 1518
BfaI	CTAG	2 cut(s)	551, 699
BfmI	CTRYAG	2 cut(s)	399, 1119
BfrI	CTTAAG	1 cut(s)	1190
BfuAI	ACCTGC	3 cut(s)	392, 952, 1126
BfuI	GTATCC	1 cut(s)	708
BglII	AGATCT	1 cut(s)	1010
BisI	GCNGC	4 cut(s)	111, 399, 1041, 1453
BlnI	CCTAGG	1 cut(s)	550
BlsI	GCNGC	4 cut(s)	112, 400, 1042, 1454
Bme1390I	CCNGG	4 cut(s)	162, 221, 654, 674
Bme18I	GGWCC	5 cut(s)	90, 164, 587, 941, 953
BmeRI	GACNNNNNGTC	1 cut(s)	300
BmgT120I	GGNCC	5 cut(s)	90, 164, 587, 941, 953
BmiI	GGNNCC	5 cut(s)	64, 462, 589, 942, 1467
BmrFI	CCNGG	4 cut(s)	162, 221, 654, 674
BmsI	GCATC	4 cut(s)	457, 576, 699, 956
BpmI	CTGGAG	1 cut(s)	927
Bpu10I	CCTNAGC	2 cut(s)	383, 1505
BpuMI	CCSGG	1 cut(s)	674
BsaAI	YACGTR	3 cut(s)	76, 243, 1102
BsaJI	CCNNGG	2 cut(s)	550, 1469
BsaXI	ACNNNNNCTCC	2 cut(s)	97, 127
Bsc4I	CCNNNNNNNGG	3 cut(s)	59, 673, 950
Bse118I	RCCGGY	1 cut(s)	1261
Bse1I	ACTGG	2 cut(s)	500, 910
Bse3DI	GCAATG	2 cut(s)	44, 230
BseBI	CCWGG	3 cut(s)	162, 221, 654
BseDI	CCNNGG	2 cut(s)	550, 1469
BseGI	GGATG	5 cut(s)	30, 229, 567, 1366, 1444
BseLI	CCNNNNNNNGG	3 cut(s)	59, 673, 950
BseMI	GCAATG	2 cut(s)	44, 230
BseMII	CTCAG	1 cut(s)	950
BseNI	ACTGG	2 cut(s)	500, 910
BseSI	GKGCMC	1 cut(s)	681
BseXI	GCAGC	4 cut(s)	97, 385, 1027, 1439
BseYI	CCCAGC	1 cut(s)	1200
BsgI	GTGCAG	1 cut(s)	1438
BshNI	GGYRCC	3 cut(s)	62, 460, 1465
BsiHKAI	GWGCWC	1 cut(s)	681
BsiSI	CCGG	2 cut(s)	673, 1262
BslFI	GGGAC	3 cut(s)	307, 573, 954
BslI	CCNNNNNNNGG	3 cut(s)	59, 673, 950
BsmAI	GTCTC	4 cut(s)	100, 737, 1033, 1518
BsmBI	CGTCTC	1 cut(s)	100
BsmFI	GGGAC	3 cut(s)	307, 573, 954
BsmI	GAATGC	1 cut(s)	841
Bsp1286I	GDGCHC	1 cut(s)	681
Bsp143I	GATC	6 cut(s)	349, 752, 829, 964, 1010, 1473
BspACI	CCGC	5 cut(s)	446, 458, 667, 1055, 1187
BspCNI	CTCAG	1 cut(s)	949
BspLI	GGNNCC	5 cut(s)	64, 462, 589, 942, 1467
BspMAI	CTGCAG	2 cut(s)	403, 1123
BspMI	ACCTGC	3 cut(s)	392, 952, 1126
BspPI	GGATC	4 cut(s)	760, 837, 959, 1481
BspT107I	GGYRCC	3 cut(s)	62, 460, 1465
BspTI	CTTAAG	1 cut(s)	1190
BsrDI	GCAATG	2 cut(s)	44, 230
BsrFI	RCCGGY	1 cut(s)	1261
BsrI	ACTGG	2 cut(s)	500, 910
BssAI	RCCGGY	1 cut(s)	1261
BssECI	CCNNGG	2 cut(s)	550, 1469
BssMI	GATC	6 cut(s)	349, 752, 829, 964, 1010, 1473
BssNAI	GTATAC	1 cut(s)	501
BssT1I	CCWWGG	2 cut(s)	550, 1469
Bst1107I	GTATAC	1 cut(s)	501
Bst2UI	CCWGG	3 cut(s)	162, 221, 654
Bst4CI	ACNGT	6 cut(s)	94, 168, 272, 763, 1087, 1342
BstAFI	CTTAAG	1 cut(s)	1190
BstBAI	YACGTR	3 cut(s)	76, 243, 1102
BstC8I	GCNNGC	4 cut(s)	841, 865, 1197, 1450
BstDEI	CTNAG	3 cut(s)	383, 936, 1505
BstENI	CCTNNNNNAGG	1 cut(s)	948
BstF5I	GGATG	5 cut(s)	30, 229, 567, 1366, 1444
BstHHI	GCGC	1 cut(s)	1146
BstKTI	GATC	6 cut(s)	352, 755, 832, 967, 1013, 1476
BstMAI	GTCTC	4 cut(s)	100, 737, 1033, 1518
BstMBI	GATC	6 cut(s)	349, 752, 829, 964, 1010, 1473
BstMWI	GCNNNNNNNGC	4 cut(s)	62, 1040, 1201, 1449
BstNI	CCWGG	3 cut(s)	162, 221, 654
BstSCI	CCNGG	4 cut(s)	160, 219, 652, 672
BstSFI	CTRYAG	2 cut(s)	399, 1119
BstSLI	GKGCMC	1 cut(s)	681
BstSNI	TACGTA	1 cut(s)	1102
BstV1I	GCAGC	4 cut(s)	97, 385, 1027, 1439
BstX2I	RGATCY	1 cut(s)	1010
BstXI	CCANNNNNNTGG	1 cut(s)	1361
BstYI	RGATCY	1 cut(s)	1010
BstZ17I	GTATAC	1 cut(s)	501
BsuI	GTATCC	1 cut(s)	708
BtsCI	GGATG	5 cut(s)	30, 229, 567, 1366, 1444
BtsI	GCAGTG	2 cut(s)	105, 850
BtsIMutI	CAGTG	3 cut(s)	105, 850, 1338
BveI	ACCTGC	3 cut(s)	392, 952, 1126
Cac8I	GCNNGC	4 cut(s)	841, 865, 1197, 1450
CfoI	GCGC	1 cut(s)	1146
Cfr10I	RCCGGY	1 cut(s)	1261
Cfr13I	GGNCC	5 cut(s)	90, 164, 587, 941, 953
Csp6I	GTAC	3 cut(s)	757, 1293, 1466
CviAII	CATG	3 cut(s)	794, 891, 1309
CviQI	GTAC	3 cut(s)	757, 1293, 1466
DdeI	CTNAG	3 cut(s)	383, 936, 1505
DpnI	GATC	6 cut(s)	351, 754, 831, 966, 1012, 1475
DpnII	GATC	6 cut(s)	349, 752, 829, 964, 1010, 1473
DraI	TTTAAA	1 cut(s)	1069
DriI	GACNNNNNGTC	1 cut(s)	300
Eam1105I	GACNNNNNGTC	1 cut(s)	300
Eco105I	TACGTA	1 cut(s)	1102
Eco130I	CCWWGG	2 cut(s)	550, 1469
Eco47I	GGWCC	5 cut(s)	90, 164, 587, 941, 953
Eco57I	CTGAAG	1 cut(s)	768
Eco72I	CACGTG	1 cut(s)	243
EcoNI	CCTNNNNNAGG	1 cut(s)	948
EcoO109I	RGGNCCY	3 cut(s)	587, 941, 953
EcoRI	GAATTC	2 cut(s)	555, 880
EcoRII	CCWGG	3 cut(s)	160, 219, 652
EcoT14I	CCWWGG	2 cut(s)	550, 1469
EcoT22I	ATGCAT	1 cut(s)	1372
ErhI	CCWWGG	2 cut(s)	550, 1469
Esp3I	CGTCTC	1 cut(s)	100
FaeI	CATG	3 cut(s)	797, 894, 1312
FalI	AAGNNNNNCTT	2 cut(s)	1220, 1252
FaqI	GGGAC	3 cut(s)	307, 573, 954
FatI	CATG	3 cut(s)	793, 890, 1308
FauI	CCCGC	1 cut(s)	1062
FauNDI	CATATG	2 cut(s)	331, 1356
FblI	GTMKAC	1 cut(s)	500
Fnu4HI	GCNGC	4 cut(s)	111, 399, 1041, 1453
FokI	GGATG	5 cut(s)	17, 236, 554, 1373, 1451
Fsp4HI	GCNGC	4 cut(s)	111, 399, 1041, 1453
FspBI	CTAG	2 cut(s)	551, 699
GlaI	GCGC	1 cut(s)	1145
GluI	GCNGC	4 cut(s)	111, 399, 1041, 1453
GsaI	CCCAGC	1 cut(s)	1204
GsuI	CTGGAG	1 cut(s)	927
HapII	CCGG	2 cut(s)	673, 1262
HhaI	GCGC	1 cut(s)	1146
Hin1II	CATG	3 cut(s)	797, 894, 1312
Hin6I	GCGC	1 cut(s)	1144
HinP1I	GCGC	1 cut(s)	1144
HindIII	AAGCTT	2 cut(s)	385, 1229
HinfI	GANTC	3 cut(s)	417, 508, 1000
HpaII	CCGG	2 cut(s)	673, 1262
HphI	GGTGA	1 cut(s)	1088
Hpy166II	GTNNAC	5 cut(s)	501, 679, 759, 1225, 1404
Hpy188I	TCNGA	4 cut(s)	354, 834, 1326, 1347
Hpy188III	TCNNGA	5 cut(s)	391, 560, 617, 712, 1218
Hpy8I	GTNNAC	5 cut(s)	501, 679, 759, 1225, 1404
HpyAV	CCTTC	3 cut(s)	387, 743, 1188
HpyCH4III	ACNGT	6 cut(s)	94, 168, 272, 763, 1087, 1342
HpyCH4IV	ACGT	6 cut(s)	75, 207, 242, 684, 855, 1101
HpyCH4V	TGCA	7 cut(s)	401, 470, 679, 947, 1121, 1370, 1455
HpyF10VI	GCNNNNNNNGC	4 cut(s)	62, 1040, 1201, 1449
HpyF3I	CTNAG	3 cut(s)	383, 936, 1505
HpySE526I	ACGT	6 cut(s)	75, 207, 242, 684, 855, 1101
Hsp92II	CATG	3 cut(s)	797, 894, 1312
HspAI	GCGC	1 cut(s)	1144
KpnI	GGTACC	1 cut(s)	1469
Kzo9I	GATC	6 cut(s)	349, 752, 829, 964, 1010, 1473
LmnI	GCTCC	1 cut(s)	118
Lsp1109I	GCAGC	4 cut(s)	97, 385, 1027, 1439
LweI	GCATC	4 cut(s)	457, 576, 699, 956
MaeI	CTAG	2 cut(s)	551, 699
MaeII	ACGT	6 cut(s)	75, 207, 242, 684, 855, 1101
MaeIII	GTNAC	4 cut(s)	178, 475, 820, 1087
MalI	GATC	6 cut(s)	351, 754, 831, 966, 1012, 1475
MboI	GATC	6 cut(s)	349, 752, 829, 964, 1010, 1473
MboII	GAAGA	3 cut(s)	10, 223, 879
MfeI	CAATTG	1 cut(s)	609
MflI	RGATCY	1 cut(s)	1010
MhlI	GDGCHC	1 cut(s)	681
MlyI	GAGTC	1 cut(s)	517
MmeI	TCCRAC	1 cut(s)	299
Mph1103I	ATGCAT	1 cut(s)	1372
MseI	TTAA	9 cut(s)	126, 147, 174, 345, 600, 1068, 1191, 1283, 1491
MslI	CAYNNNNRTG	2 cut(s)	889, 1359
MspCI	CTTAAG	1 cut(s)	1190
MspI	CCGG	2 cut(s)	673, 1262
MspR9I	CCNGG	4 cut(s)	162, 221, 654, 674
MunI	CAATTG	1 cut(s)	609
Mva1269I	GAATGC	1 cut(s)	841
MvaI	CCWGG	3 cut(s)	162, 221, 654
MwoI	GCNNNNNNNGC	4 cut(s)	62, 1040, 1201, 1449
NciI	CCSGG	1 cut(s)	674
NdeI	CATATG	2 cut(s)	331, 1356
NdeII	GATC	6 cut(s)	349, 752, 829, 964, 1010, 1473
NlaIII	CATG	3 cut(s)	797, 894, 1312
NlaIV	GGNNCC	5 cut(s)	64, 462, 589, 942, 1467
NmuCI	GTSAC	1 cut(s)	178
NsiI	ATGCAT	1 cut(s)	1372
PaqCI	CACCTGC	1 cut(s)	392
PctI	GAATGC	1 cut(s)	841
PfeI	GAWTC	2 cut(s)	417, 1000
PfoI	TCCNGGA	1 cut(s)	160
PkrI	GCNGC	4 cut(s)	112, 400, 1042, 1454
PleI	GAGTC	1 cut(s)	516
PmaCI	CACGTG	1 cut(s)	243
PmlI	CACGTG	1 cut(s)	243
PpsI	GAGTC	1 cut(s)	516
Ppu21I	YACGTR	3 cut(s)	76, 243, 1102
PpuMI	RGGWCCY	3 cut(s)	587, 941, 953
PshBI	ATTAAT	1 cut(s)	147
PsiI	TTATAA	1 cut(s)	1130
Psp1406I	AACGTT	1 cut(s)	684
Psp5II	RGGWCCY	3 cut(s)	587, 941, 953
Psp6I	CCWGG	3 cut(s)	160, 219, 652
PspCI	CACGTG	1 cut(s)	243
PspFI	CCCAGC	1 cut(s)	1200
PspGI	CCWGG	3 cut(s)	160, 219, 652
PspN4I	GGNNCC	5 cut(s)	64, 462, 589, 942, 1467
PspPI	GGNCC	5 cut(s)	90, 164, 587, 941, 953
PspPPI	RGGWCCY	3 cut(s)	587, 941, 953
PstI	CTGCAG	2 cut(s)	403, 1123
PsuI	RGATCY	1 cut(s)	1010
RsaI	GTAC	3 cut(s)	758, 1294, 1467
RsaNI	GTAC	3 cut(s)	757, 1293, 1466
RseI	CAYNNNNRTG	2 cut(s)	889, 1359
SaqAI	TTAA	9 cut(s)	126, 147, 174, 345, 600, 1068, 1191, 1283, 1491
SatI	GCNGC	4 cut(s)	111, 399, 1041, 1453
Sau3AI	GATC	6 cut(s)	349, 752, 829, 964, 1010, 1473
Sau96I	GGNCC	5 cut(s)	90, 164, 587, 941, 953
SchI	GAGTC	1 cut(s)	517
ScrFI	CCNGG	4 cut(s)	162, 221, 654, 674
SduI	GDGCHC	1 cut(s)	681
SfaNI	GCATC	4 cut(s)	457, 576, 699, 956
SfcI	CTRYAG	2 cut(s)	399, 1119
SinI	GGWCC	5 cut(s)	90, 164, 587, 941, 953
SmiMI	CAYNNNNRTG	2 cut(s)	889, 1359
SmlI	CTYRAG	1 cut(s)	1190
SmoI	CTYRAG	1 cut(s)	1190
SnaBI	TACGTA	1 cut(s)	1102
SsiI	CCGC	5 cut(s)	446, 458, 667, 1055, 1187
SspMI	CTAG	2 cut(s)	551, 699
StyD4I	CCNGG	4 cut(s)	160, 219, 652, 672
StyI	CCWWGG	2 cut(s)	550, 1469
TaaI	ACNGT	6 cut(s)	94, 168, 272, 763, 1087, 1342
TaiI	ACGT	6 cut(s)	78, 210, 245, 687, 858, 1104
TaqI	TCGA	2 cut(s)	981, 1181
TfiI	GAWTC	2 cut(s)	417, 1000
Tru1I	TTAA	9 cut(s)	126, 147, 174, 345, 600, 1068, 1191, 1283, 1491
Tru9I	TTAA	9 cut(s)	126, 147, 174, 345, 600, 1068, 1191, 1283, 1491
TscAI	CASTG	3 cut(s)	112, 850, 1345
TseFI	GTSAC	1 cut(s)	178
TseI	GCWGC	4 cut(s)	110, 398, 1040, 1452
Tsp45I	GTSAC	1 cut(s)	178
TspDTI	ATGAA	8 cut(s)	782, 801, 873, 879, 1013, 1155, 1268, 1297
TspGWI	ACGGA	2 cut(s)	538, 594
TspRI	CASTG	3 cut(s)	112, 850, 1345
Vha464I	CTTAAG	1 cut(s)	1190
VneI	GTGCAC	1 cut(s)	677
VpaK11BI	GGWCC	5 cut(s)	90, 164, 587, 941, 953
VspI	ATTAAT	1 cut(s)	147
XagI	CCTNNNNNAGG	1 cut(s)	948
XapI	RAATTY	3 cut(s)	555, 706, 880
XmaJI	CCTAGG	1 cut(s)	550
XmiI	GTMKAC	1 cut(s)	500
XspI	CTAG	2 cut(s)	551, 699
Zsp2I	ATGCAT	1 cut(s)	1372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.