SEC-C motif
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0321781 RchiOBHm_Chr6g0246461 |
| rosa_samantha | Rh1AG046900 Rh1AG242500 Rh1CG226300 Rh6DG380000 Rh7BG262600 |
| rosa_wichuraiana | Rw6G002990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 20 |
| AcsI | RAATTY | 1 cut(s) | 337 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 255 |
| AgsI | TTSAA | 2 cut(s) | 58, 371 |
| AjnI | CCWGG | 3 cut(s) | 10, 248, 360 |
| AluBI | AGCT | 1 cut(s) | 218 |
| AluI | AGCT | 1 cut(s) | 218 |
| Ama87I | CYCGRG | 1 cut(s) | 156 |
| ApeKI | GCWGC | 1 cut(s) | 191 |
| ApoI | RAATTY | 1 cut(s) | 337 |
| AsuHPI | GGTGA | 2 cut(s) | 238, 368 |
| AvaI | CYCGRG | 1 cut(s) | 156 |
| BbsI | GAAGAC | 1 cut(s) | 38 |
| BbvI | GCAGC | 1 cut(s) | 203 |
| BccI | CCATC | 1 cut(s) | 268 |
| BciT130I | CCWGG | 3 cut(s) | 12, 250, 362 |
| BfaI | CTAG | 2 cut(s) | 39, 255 |
| BisI | GCNGC | 1 cut(s) | 192 |
| BlsI | GCNGC | 1 cut(s) | 193 |
| Bme1390I | CCNGG | 3 cut(s) | 12, 250, 362 |
| BmeT110I | CYCGRG | 1 cut(s) | 156 |
| BmrFI | CCNGG | 3 cut(s) | 12, 250, 362 |
| BmsI | GCATC | 1 cut(s) | 91 |
| BpiI | GAAGAC | 1 cut(s) | 38 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 150, 182 |
| Bsa29I | ATCGAT | 1 cut(s) | 122 |
| BsaJI | CCNNGG | 2 cut(s) | 249, 360 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 67, 97 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 255 |
| BseBI | CCWGG | 3 cut(s) | 12, 250, 362 |
| BseCI | ATCGAT | 1 cut(s) | 122 |
| BseDI | CCNNGG | 2 cut(s) | 249, 360 |
| BseGI | GGATG | 2 cut(s) | 356, 393 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BseXI | GCAGC | 1 cut(s) | 203 |
| BshVI | ATCGAT | 1 cut(s) | 122 |
| BsiHKCI | CYCGRG | 1 cut(s) | 156 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BsmI | GAATGC | 2 cut(s) | 53, 235 |
| BsoBI | CYCGRG | 1 cut(s) | 156 |
| BspACI | CCGC | 1 cut(s) | 20 |
| BspDI | ATCGAT | 1 cut(s) | 122 |
| BssECI | CCNNGG | 2 cut(s) | 249, 360 |
| Bst2UI | CCWGG | 3 cut(s) | 12, 250, 362 |
| Bst6I | CTCTTC | 1 cut(s) | 37 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 95 |
| BstDEI | CTNAG | 1 cut(s) | 399 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 253 |
| BstF5I | GGATG | 2 cut(s) | 356, 393 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 95, 260 |
| BstNI | CCWGG | 3 cut(s) | 12, 250, 362 |
| BstSCI | CCNGG | 3 cut(s) | 10, 248, 360 |
| BstV1I | GCAGC | 1 cut(s) | 203 |
| BstV2I | GAAGAC | 1 cut(s) | 38 |
| Bsu15I | ATCGAT | 1 cut(s) | 122 |
| BsuTUI | ATCGAT | 1 cut(s) | 122 |
| BtsCI | GGATG | 2 cut(s) | 356, 393 |
| BtsI | GCAGTG | 1 cut(s) | 88 |
| BtsIMutI | CAGTG | 1 cut(s) | 88 |
| ClaI | ATCGAT | 1 cut(s) | 122 |
| CviJI | RGCY | 2 cut(s) | 218, 254 |
| CviKI_1 | RGCY | 2 cut(s) | 218, 254 |
| DdeI | CTNAG | 1 cut(s) | 399 |
| Eam1104I | CTCTTC | 1 cut(s) | 37 |
| EarI | CTCTTC | 1 cut(s) | 37 |
| Eco32I | GATATC | 1 cut(s) | 134 |
| Eco88I | CYCGRG | 1 cut(s) | 156 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 253 |
| EcoRII | CCWGG | 3 cut(s) | 10, 248, 360 |
| EcoRV | GATATC | 1 cut(s) | 134 |
| EcoT22I | ATGCAT | 1 cut(s) | 106 |
| FaiI | YATR | 2 cut(s) | 330, 354 |
| Fnu4HI | GCNGC | 1 cut(s) | 192 |
| FokI | GGATG | 2 cut(s) | 343, 400 |
| Fsp4HI | GCNGC | 1 cut(s) | 192 |
| FspBI | CTAG | 2 cut(s) | 39, 255 |
| GluI | GCNGC | 1 cut(s) | 192 |
| HinfI | GANTC | 4 cut(s) | 5, 119, 149, 163 |
| HphI | GGTGA | 2 cut(s) | 238, 368 |
| Hpy166II | GTNNAC | 1 cut(s) | 246 |
| Hpy188I | TCNGA | 1 cut(s) | 140 |
| Hpy188III | TCNNGA | 1 cut(s) | 158 |
| Hpy8I | GTNNAC | 1 cut(s) | 246 |
| HpyAV | CCTTC | 2 cut(s) | 287, 359 |
| HpyCH4V | TGCA | 3 cut(s) | 104, 233, 239 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 95, 260 |
| HpyF3I | CTNAG | 1 cut(s) | 399 |
| LpnPI | CCDG | 7 cut(s) | 24, 101, 235, 262, 347, 369, 374 |
| Lsp1109I | GCAGC | 1 cut(s) | 203 |
| LweI | GCATC | 1 cut(s) | 91 |
| MaeI | CTAG | 2 cut(s) | 39, 255 |
| MboII | GAAGA | 2 cut(s) | 43, 54 |
| MluCI | AATT | 3 cut(s) | 337, 415, 424 |
| MmeI | TCCRAC | 1 cut(s) | 331 |
| MnlI | CCTC | 2 cut(s) | 134, 315 |
| Mph1103I | ATGCAT | 1 cut(s) | 106 |
| MseI | TTAA | 2 cut(s) | 284, 335 |
| MslI | CAYNNNNRTG | 1 cut(s) | 386 |
| MspR9I | CCNGG | 3 cut(s) | 12, 250, 362 |
| Mva1269I | GAATGC | 2 cut(s) | 53, 235 |
| MvaI | CCWGG | 3 cut(s) | 12, 250, 362 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 95, 260 |
| NsiI | ATGCAT | 1 cut(s) | 106 |
| PaeR7I | CTCGAG | 1 cut(s) | 156 |
| PctI | GAATGC | 2 cut(s) | 53, 235 |
| PfeI | GAWTC | 4 cut(s) | 5, 119, 149, 163 |
| PkrI | GCNGC | 1 cut(s) | 193 |
| Psp6I | CCWGG | 3 cut(s) | 10, 248, 360 |
| PspGI | CCWGG | 3 cut(s) | 10, 248, 360 |
| RseI | CAYNNNNRTG | 1 cut(s) | 386 |
| SaqAI | TTAA | 2 cut(s) | 284, 335 |
| SatI | GCNGC | 1 cut(s) | 192 |
| ScrFI | CCNGG | 3 cut(s) | 12, 250, 362 |
| SetI | ASST | 6 cut(s) | 13, 220, 251, 326, 366, 396 |
| SfaNI | GCATC | 1 cut(s) | 91 |
| Sfr274I | CTCGAG | 1 cut(s) | 156 |
| SlaI | CTCGAG | 1 cut(s) | 156 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 386 |
| SmlI | CTYRAG | 1 cut(s) | 156 |
| SmoI | CTYRAG | 1 cut(s) | 156 |
| Sse9I | AATT | 3 cut(s) | 337, 415, 424 |
| SsiI | CCGC | 1 cut(s) | 20 |
| SspMI | CTAG | 2 cut(s) | 39, 255 |
| StyD4I | CCNGG | 3 cut(s) | 10, 248, 360 |
| TaqI | TCGA | 2 cut(s) | 122, 157 |
| TasI | AATT | 3 cut(s) | 337, 415, 424 |
| TfiI | GAWTC | 4 cut(s) | 5, 119, 149, 163 |
| Tru1I | TTAA | 2 cut(s) | 284, 335 |
| Tru9I | TTAA | 2 cut(s) | 284, 335 |
| TscAI | CASTG | 1 cut(s) | 88 |
| TseI | GCWGC | 1 cut(s) | 191 |
| TspDTI | ATGAA | 3 cut(s) | 44, 341, 404 |
| TspRI | CASTG | 1 cut(s) | 88 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 253 |
| XapI | RAATTY | 1 cut(s) | 337 |
| XhoI | CTCGAG | 1 cut(s) | 156 |
| XspI | CTAG | 2 cut(s) | 39, 255 |
| Zsp2I | ATGCAT | 1 cut(s) | 106 |