SEC-C motif
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0321781 RchiOBHm_Chr6g0246461 |
| rosa_samantha | Rh1AG046900 Rh1AG242500 Rh1CG226300 Rh6DG380000 Rh7BG262600 |
| rosa_wichuraiana | Rw6G002990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 58 |
| AjnI | CCWGG | 1 cut(s) | 10 |
| ApeKI | GCWGC | 1 cut(s) | 191 |
| BbsI | GAAGAC | 1 cut(s) | 38 |
| BbvI | GCAGC | 1 cut(s) | 203 |
| BciT130I | CCWGG | 1 cut(s) | 12 |
| BisI | GCNGC | 1 cut(s) | 192 |
| BlsI | GCNGC | 1 cut(s) | 193 |
| Bme1390I | CCNGG | 1 cut(s) | 12 |
| BmrFI | CCNGG | 1 cut(s) | 12 |
| BmsI | GCATC | 2 cut(s) | 91, 289 |
| BpiI | GAAGAC | 1 cut(s) | 38 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 150, 182 |
| BpmI | CTGGAG | 2 cut(s) | 177, 310 |
| Bsa29I | ATCGAT | 1 cut(s) | 122 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 67, 97 |
| Bse1I | ACTGG | 2 cut(s) | 40, 160 |
| BseBI | CCWGG | 1 cut(s) | 12 |
| BseCI | ATCGAT | 1 cut(s) | 122 |
| BseNI | ACTGG | 2 cut(s) | 40, 160 |
| BseXI | GCAGC | 1 cut(s) | 203 |
| BshVI | ATCGAT | 1 cut(s) | 122 |
| BsmI | GAATGC | 2 cut(s) | 53, 199 |
| BspDI | ATCGAT | 1 cut(s) | 122 |
| BsrI | ACTGG | 2 cut(s) | 40, 160 |
| Bst2UI | CCWGG | 1 cut(s) | 12 |
| Bst6I | CTCTTC | 1 cut(s) | 37 |
| BstNI | CCWGG | 1 cut(s) | 12 |
| BstSCI | CCNGG | 1 cut(s) | 10 |
| BstV1I | GCAGC | 1 cut(s) | 203 |
| BstV2I | GAAGAC | 1 cut(s) | 38 |
| Bsu15I | ATCGAT | 1 cut(s) | 122 |
| BsuTUI | ATCGAT | 1 cut(s) | 122 |
| BtsI | GCAGTG | 1 cut(s) | 88 |
| BtsIMutI | CAGTG | 1 cut(s) | 88 |
| ClaI | ATCGAT | 1 cut(s) | 122 |
| CviJI | RGCY | 1 cut(s) | 330 |
| CviKI_1 | RGCY | 1 cut(s) | 330 |
| Eam1104I | CTCTTC | 1 cut(s) | 37 |
| EarI | CTCTTC | 1 cut(s) | 37 |
| Eco32I | GATATC | 1 cut(s) | 134 |
| EcoRII | CCWGG | 1 cut(s) | 10 |
| EcoRV | GATATC | 1 cut(s) | 134 |
| EcoT22I | ATGCAT | 2 cut(s) | 106, 346 |
| FaiI | YATR | 5 cut(s) | 308, 333, 342, 346, 352 |
| Fnu4HI | GCNGC | 1 cut(s) | 192 |
| Fsp4HI | GCNGC | 1 cut(s) | 192 |
| GluI | GCNGC | 1 cut(s) | 192 |
| GsuI | CTGGAG | 2 cut(s) | 177, 310 |
| HinfI | GANTC | 4 cut(s) | 5, 119, 149, 163 |
| HpyAV | CCTTC | 1 cut(s) | 227 |
| HpyCH4V | TGCA | 3 cut(s) | 104, 302, 344 |
| LpnPI | CCDG | 7 cut(s) | 21, 24, 101, 141, 306, 322, 340 |
| Lsp1109I | GCAGC | 1 cut(s) | 203 |
| LweI | GCATC | 2 cut(s) | 91, 289 |
| MaeIII | GTNAC | 1 cut(s) | 88 |
| MboII | GAAGA | 2 cut(s) | 43, 54 |
| MluCI | AATT | 1 cut(s) | 243 |
| MmeI | TCCRAC | 1 cut(s) | 272 |
| MnlI | CCTC | 2 cut(s) | 134, 256 |
| Mph1103I | ATGCAT | 2 cut(s) | 106, 346 |
| MseI | TTAA | 1 cut(s) | 224 |
| MslI | CAYNNNNRTG | 1 cut(s) | 349 |
| MspR9I | CCNGG | 1 cut(s) | 12 |
| Mva1269I | GAATGC | 2 cut(s) | 53, 199 |
| MvaI | CCWGG | 1 cut(s) | 12 |
| NmuCI | GTSAC | 1 cut(s) | 88 |
| NsiI | ATGCAT | 2 cut(s) | 106, 346 |
| PctI | GAATGC | 2 cut(s) | 53, 199 |
| PfeI | GAWTC | 4 cut(s) | 5, 119, 149, 163 |
| PkrI | GCNGC | 1 cut(s) | 193 |
| Psp6I | CCWGG | 1 cut(s) | 10 |
| PspGI | CCWGG | 1 cut(s) | 10 |
| RseI | CAYNNNNRTG | 1 cut(s) | 349 |
| SaqAI | TTAA | 1 cut(s) | 224 |
| SatI | GCNGC | 1 cut(s) | 192 |
| ScrFI | CCNGG | 1 cut(s) | 12 |
| SetI | ASST | 4 cut(s) | 13, 216, 267, 341 |
| SfaNI | GCATC | 2 cut(s) | 91, 289 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 349 |
| Sse9I | AATT | 1 cut(s) | 243 |
| StyD4I | CCNGG | 1 cut(s) | 10 |
| TaqI | TCGA | 1 cut(s) | 122 |
| TasI | AATT | 1 cut(s) | 243 |
| TfiI | GAWTC | 4 cut(s) | 5, 119, 149, 163 |
| Tru1I | TTAA | 1 cut(s) | 224 |
| Tru9I | TTAA | 1 cut(s) | 224 |
| TscAI | CASTG | 1 cut(s) | 88 |
| TseFI | GTSAC | 1 cut(s) | 88 |
| TseI | GCWGC | 1 cut(s) | 191 |
| Tsp45I | GTSAC | 1 cut(s) | 88 |
| TspDTI | ATGAA | 2 cut(s) | 44, 275 |
| TspGWI | ACGGA | 1 cut(s) | 267 |
| TspRI | CASTG | 1 cut(s) | 88 |
| Zsp2I | ATGCAT | 2 cut(s) | 106, 346 |