SEC-C motif
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0321781 RchiOBHm_Chr6g0246461 |
| rosa_samantha | Rh1AG046900 Rh1AG242500 Rh1CG226300 Rh6DG380000 Rh7BG262600 |
| rosa_wichuraiana | Rw6G002990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 59, 400 |
| AclWI | GGATC | 2 cut(s) | 12, 40 |
| AcsI | RAATTY | 3 cut(s) | 365, 385, 438 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 294, 399 |
| AgsI | TTSAA | 2 cut(s) | 97, 385 |
| AjnI | CCWGG | 1 cut(s) | 287 |
| AlwI | GGATC | 2 cut(s) | 12, 40 |
| ApoI | RAATTY | 3 cut(s) | 365, 385, 438 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 488 |
| AspA2I | CCTAGG | 1 cut(s) | 49 |
| AsuHPI | GGTGA | 1 cut(s) | 277 |
| AsuII | TTCGAA | 1 cut(s) | 460 |
| AvrII | CCTAGG | 1 cut(s) | 49 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BbsI | GAAGAC | 1 cut(s) | 77 |
| BccI | CCATC | 1 cut(s) | 307 |
| BciT130I | CCWGG | 1 cut(s) | 289 |
| BfaI | CTAG | 3 cut(s) | 50, 78, 294 |
| BlnI | CCTAGG | 1 cut(s) | 49 |
| Bme1390I | CCNGG | 1 cut(s) | 289 |
| BmiI | GGNNCC | 2 cut(s) | 6, 414 |
| BmrFI | CCNGG | 1 cut(s) | 289 |
| BmsI | GCATC | 3 cut(s) | 130, 439, 461 |
| BpiI | GAAGAC | 1 cut(s) | 77 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 189, 221 |
| BpmI | CTGGAG | 1 cut(s) | 216 |
| Bpu14I | TTCGAA | 1 cut(s) | 460 |
| Bsa29I | ATCGAT | 1 cut(s) | 161 |
| BsaJI | CCNNGG | 2 cut(s) | 49, 288 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 106, 136 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 294, 399 |
| Bse1I | ACTGG | 1 cut(s) | 199 |
| BseBI | CCWGG | 1 cut(s) | 289 |
| BseCI | ATCGAT | 1 cut(s) | 161 |
| BseDI | CCNNGG | 2 cut(s) | 49, 288 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 294, 399 |
| BseNI | ACTGG | 1 cut(s) | 199 |
| BshVI | ATCGAT | 1 cut(s) | 161 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 294, 399 |
| BsmI | GAATGC | 2 cut(s) | 92, 274 |
| Bsp119I | TTCGAA | 1 cut(s) | 460 |
| Bsp143I | GATC | 2 cut(s) | 4, 45 |
| BspACI | CCGC | 2 cut(s) | 59, 400 |
| BspDI | ATCGAT | 1 cut(s) | 161 |
| BspLI | GGNNCC | 2 cut(s) | 6, 414 |
| BspPI | GGATC | 2 cut(s) | 12, 40 |
| BspT104I | TTCGAA | 1 cut(s) | 460 |
| BsrI | ACTGG | 1 cut(s) | 199 |
| BssECI | CCNNGG | 2 cut(s) | 49, 288 |
| BssMI | GATC | 2 cut(s) | 4, 45 |
| BssT1I | CCWWGG | 1 cut(s) | 49 |
| Bst2UI | CCWGG | 1 cut(s) | 289 |
| Bst4CI | ACNGT | 1 cut(s) | 29 |
| Bst6I | CTCTTC | 2 cut(s) | 76, 462 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 134 |
| BstBI | TTCGAA | 1 cut(s) | 460 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 292 |
| BstKTI | GATC | 2 cut(s) | 7, 48 |
| BstMBI | GATC | 2 cut(s) | 4, 45 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 134, 299 |
| BstNI | CCWGG | 1 cut(s) | 289 |
| BstSCI | CCNGG | 1 cut(s) | 287 |
| BstV2I | GAAGAC | 1 cut(s) | 77 |
| BstX2I | RGATCY | 1 cut(s) | 4 |
| BstYI | RGATCY | 1 cut(s) | 4 |
| Bsu15I | ATCGAT | 1 cut(s) | 161 |
| BsuTUI | ATCGAT | 1 cut(s) | 161 |
| BtsI | GCAGTG | 1 cut(s) | 127 |
| BtsIMutI | CAGTG | 2 cut(s) | 127, 479 |
| ClaI | ATCGAT | 1 cut(s) | 161 |
| CviJI | RGCY | 2 cut(s) | 293, 435 |
| CviKI_1 | RGCY | 2 cut(s) | 293, 435 |
| DpnI | GATC | 2 cut(s) | 6, 47 |
| DpnII | GATC | 2 cut(s) | 4, 45 |
| Eam1104I | CTCTTC | 2 cut(s) | 76, 462 |
| EarI | CTCTTC | 2 cut(s) | 76, 462 |
| Eco130I | CCWWGG | 1 cut(s) | 49 |
| Eco32I | GATATC | 1 cut(s) | 173 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 292 |
| EcoRII | CCWGG | 1 cut(s) | 287 |
| EcoRV | GATATC | 1 cut(s) | 173 |
| EcoT14I | CCWWGG | 1 cut(s) | 49 |
| EcoT22I | ATGCAT | 2 cut(s) | 145, 454 |
| ErhI | CCWWGG | 1 cut(s) | 49 |
| FaiI | YATR | 3 cut(s) | 421, 466, 502 |
| FspBI | CTAG | 3 cut(s) | 50, 78, 294 |
| GsuI | CTGGAG | 1 cut(s) | 216 |
| HinfI | GANTC | 3 cut(s) | 158, 188, 202 |
| HphI | GGTGA | 1 cut(s) | 277 |
| Hpy166II | GTNNAC | 1 cut(s) | 285 |
| Hpy188I | TCNGA | 1 cut(s) | 179 |
| Hpy8I | GTNNAC | 1 cut(s) | 285 |
| HpyAV | CCTTC | 2 cut(s) | 326, 499 |
| HpyCH4III | ACNGT | 1 cut(s) | 29 |
| HpyCH4V | TGCA | 4 cut(s) | 143, 272, 278, 452 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 134, 299 |
| Kzo9I | GATC | 2 cut(s) | 4, 45 |
| LpnPI | CCDG | 5 cut(s) | 140, 180, 274, 301, 383 |
| LweI | GCATC | 3 cut(s) | 130, 439, 461 |
| MaeI | CTAG | 3 cut(s) | 50, 78, 294 |
| MalI | GATC | 2 cut(s) | 6, 47 |
| MboI | GATC | 2 cut(s) | 4, 45 |
| MboII | GAAGA | 3 cut(s) | 82, 93, 449 |
| MflI | RGATCY | 1 cut(s) | 4 |
| MluCI | AATT | 3 cut(s) | 365, 385, 438 |
| MmeI | TCCRAC | 1 cut(s) | 370 |
| MnlI | CCTC | 2 cut(s) | 173, 503 |
| Mph1103I | ATGCAT | 2 cut(s) | 145, 454 |
| MroXI | GAANNNNTTC | 1 cut(s) | 488 |
| MseI | TTAA | 2 cut(s) | 14, 323 |
| MspR9I | CCNGG | 1 cut(s) | 289 |
| Mva1269I | GAATGC | 2 cut(s) | 92, 274 |
| MvaI | CCWGG | 1 cut(s) | 289 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 134, 299 |
| NdeII | GATC | 2 cut(s) | 4, 45 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 414 |
| NsiI | ATGCAT | 2 cut(s) | 145, 454 |
| NspV | TTCGAA | 1 cut(s) | 460 |
| PctI | GAATGC | 2 cut(s) | 92, 274 |
| PdmI | GAANNNNTTC | 1 cut(s) | 488 |
| PfeI | GAWTC | 3 cut(s) | 158, 188, 202 |
| Psp6I | CCWGG | 1 cut(s) | 287 |
| PspGI | CCWGG | 1 cut(s) | 287 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 414 |
| PsuI | RGATCY | 1 cut(s) | 4 |
| SaqAI | TTAA | 2 cut(s) | 14, 323 |
| Sau3AI | GATC | 2 cut(s) | 4, 45 |
| ScrFI | CCNGG | 1 cut(s) | 289 |
| SetI | ASST | 1 cut(s) | 290 |
| SfaNI | GCATC | 3 cut(s) | 130, 439, 461 |
| SfuI | TTCGAA | 1 cut(s) | 460 |
| Sse9I | AATT | 3 cut(s) | 365, 385, 438 |
| SsiI | CCGC | 2 cut(s) | 59, 400 |
| SspMI | CTAG | 3 cut(s) | 50, 78, 294 |
| StyD4I | CCNGG | 1 cut(s) | 287 |
| StyI | CCWWGG | 1 cut(s) | 49 |
| TaaI | ACNGT | 1 cut(s) | 29 |
| TaqI | TCGA | 2 cut(s) | 161, 460 |
| TasI | AATT | 3 cut(s) | 365, 385, 438 |
| TfiI | GAWTC | 3 cut(s) | 158, 188, 202 |
| Tru1I | TTAA | 2 cut(s) | 14, 323 |
| Tru9I | TTAA | 2 cut(s) | 14, 323 |
| TscAI | CASTG | 2 cut(s) | 127, 486 |
| TspDTI | ATGAA | 1 cut(s) | 83 |
| TspRI | CASTG | 2 cut(s) | 127, 486 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 292 |
| XapI | RAATTY | 3 cut(s) | 365, 385, 438 |
| XmaJI | CCTAGG | 1 cut(s) | 49 |
| XmnI | GAANNNNTTC | 1 cut(s) | 488 |
| XspI | CTAG | 3 cut(s) | 50, 78, 294 |
| Zsp2I | ATGCAT | 2 cut(s) | 145, 454 |